RStudio Server
R: 4.4.3
rstudio-server: 2023.12.1-402
Release Notes
Added Bioconductor 3.20 packages, updated R to version 4.4.3, and enabled SSL for secure HTTPS connections.
R packages (3890)
| package | version | package | version |
|---|---|---|---|
| a4 | 1.54.0 | a4Base | 1.54.0 |
| a4Classif | 1.54.0 | a4Core | 1.54.0 |
| a4Preproc | 1.54.0 | a4Reporting | 1.54.0 |
| ABarray | 1.74.0 | abind | 1.4-8 |
| abseqR | 1.24.0 | ABSSeq | 1.60.0 |
| acde | 1.36.0 | ACE | 1.24.0 |
| aCGH | 1.84.0 | ACME | 2.62.0 |
| ada | 2.0-5 | adabag | 5.0 |
| ADaCGH2 | 2.46.0 | ADAM | 1.22.0 |
| ADAMgui | 1.22.0 | additivityTests | 1.1-4.2 |
| adductData | 1.22.0 | adductomicsR | 1.22.0 |
| ade4 | 1.7-23 | adehabitatLT | 0.3.28 |
| adehabitatMA | 0.3.17 | ADGofTest | 0.3 |
| ADImpute | 1.16.0 | admisc | 0.37 |
| adSplit | 1.76.0 | adverSCarial | 1.4.0 |
| AffiXcan | 1.24.0 | affxparser | 1.78.0 |
| affy | 1.84.0 | affycomp | 1.82.0 |
| affyContam | 1.64.0 | affycoretools | 1.78.0 |
| affydata | 1.54.0 | affyILM | 1.58.0 |
| affyio | 1.76.0 | affylmGUI | 1.80.0 |
| affyPLM | 1.82.0 | AffyRNADegradation | 1.52.0 |
| AGDEX | 1.54.0 | aggregateBioVar | 1.16.0 |
| aggregation | 1.0.1 | agilp | 3.38.0 |
| AgiMicroRna | 2.56.0 | agricolae | 1.3-7 |
| AHMassBank | 1.6.1 | AhoCorasickTrie | 0.1.3 |
| AICcmodavg | 2.3-4 | AIMS | 1.38.0 |
| airpart | 1.14.0 | airway | 1.26.0 |
| akima | 0.6-3.4 | akmbiclust | 0.1.0 |
| alabama | 2023.1.0 | alabaster | 1.6.0 |
| alabaster.base | 1.6.1 | alabaster.bumpy | 1.6.0 |
| alabaster.files | 1.4.0 | alabaster.mae | 1.6.0 |
| alabaster.matrix | 1.6.1 | alabaster.ranges | 1.6.0 |
| alabaster.sce | 1.6.0 | alabaster.schemas | 1.6.0 |
| alabaster.se | 1.6.0 | alabaster.spatial | 1.6.1 |
| alabaster.string | 1.6.0 | alabaster.vcf | 1.6.0 |
| ALDEx2 | 1.38.0 | alevinQC | 1.22.0 |
| AlgDesign | 1.2.1.1 | ALL | 1.48.0 |
| AllelicImbalance | 1.44.0 | alluvial | 0.1-2 |
| AlphaBeta | 1.20.0 | AlpsNMR | 4.8.0 |
| altcdfenvs | 2.68.0 | amap | 0.8-20 |
| AMARETTO | 1.22.0 | AMOUNTAIN | 1.32.0 |
| amplican | 1.28.0 | analogue | 0.17-7 |
| Anaquin | 2.30.0 | ANCOMBC | 2.8.1 |
| AneuFinder | 1.34.0 | AneuFinderData | 1.34.0 |
| ANF | 1.28.0 | animalcules | 1.22.0 |
| animation | 2.7 | annaffy | 1.78.0 |
| anndata | 0.7.5.6 | annmap | 1.48.0 |
| annotate | 1.84.0 | AnnotationDbi | 1.68.0 |
| AnnotationFilter | 1.30.0 | AnnotationForge | 1.48.0 |
| AnnotationHub | 3.14.0 | AnnotationHubData | 1.36.0 |
| annotationTools | 1.80.0 | annotatr | 1.32.0 |
| anota | 1.54.0 | anota2seq | 1.28.0 |
| antiProfiles | 1.46.0 | AnVIL | 1.18.5 |
| AnVILBase | 1.0.0 | AnVILBilling | 1.16.0 |
| AnVILGCP | 1.0.0 | AnVILPublish | 1.16.0 |
| AnVILWorkflow | 1.6.0 | anytime | 0.3.11 |
| aod | 1.3.3 | aods3 | 0.5 |
| APAlyzer | 1.20.0 | apcluster | 1.4.13 |
| apComplex | 2.72.0 | ape | 5.8-1 |
| apeglm | 1.28.0 | APL | 1.10.2 |
| aplot | 0.2.5 | appreci8R | 1.24.0 |
| archive | 1.1.12 | argparse | 2.2.5 |
| aricode | 1.0.3 | arm | 1.14-4 |
| aroma.affymetrix | 3.2.2 | aroma.apd | 0.7.0 |
| aroma.core | 3.3.1 | aroma.light | 3.36.0 |
| ArrayExpress | 1.66.0 | arrayhelpers | 1.1-0 |
| arrayMvout | 1.64.0 | arrayQuality | 1.84.0 |
| arrayQualityMetrics | 3.62.0 | ARRmData | 1.42.0 |
| ARRmNormalization | 1.46.0 | arrow | 19.0.1 |
| artMS | 1.24.0 | arules | 1.7-9 |
| ASAFE | 1.32.0 | ASEB | 1.50.0 |
| ASGSCA | 1.40.0 | ash | 1.0-15 |
| ashr | 2.2-63 | ASICS | 2.22.0 |
| askpass | 1.2.1 | ASpli | 2.16.0 |
| assertive.base | 0.0-9 | assertive.files | 0.0-2 |
| assertive.numbers | 0.0-2 | assertive.sets | 0.0-3 |
| assertthat | 0.2.1 | AssessORF | 1.24.0 |
| ASSET | 2.24.0 | ASSIGN | 1.42.0 |
| assorthead | 1.0.1 | ASURAT | 1.10.0 |
| ATACCoGAPS | 1.4.0 | ATACseqQC | 1.30.0 |
| ATACseqTFEA | 1.8.0 | atena | 1.12.0 |
| atSNP | 1.22.0 | attempt | 0.3.1 |
| attract | 1.58.0 | AUCell | 1.28.0 |
| autonomics | 1.14.8 | available | 1.1.0 |
| AWFisher | 1.20.0 | aws | 2.5-6 |
| aws.s3 | 0.3.21 | aws.signature | 0.6.0 |
| awsMethods | 1.1-1 | awst | 1.14.0 |
| b64 | 0.1.3 | BaalChIP | 1.32.0 |
| babelgene | 22.9 | backbone | 2.1.4 |
| backports | 1.5.0 | bacon | 1.34.0 |
| BADER | 1.44.0 | BadRegionFinder | 1.34.0 |
| BAGS | 2.46.0 | ballgown | 2.38.0 |
| bambu | 3.8.3 | bamlss | 1.2-5 |
| bamsignals | 1.38.0 | BANDITS | 1.22.0 |
| bandle | 1.10.0 | banocc | 1.30.0 |
| barcodetrackR | 1.14.0 | base64 | 2.0.2 |
| base64enc | 0.1-3 | base64url | 1.4 |
| basecallQC | 1.30.0 | baseline | 1.3-5 |
| BaseSpaceR | 1.50.0 | Basic4Cseq | 1.42.0 |
| BASiCS | 2.18.0 | BASiCStan | 1.8.0 |
| BasicSTARRseq | 1.34.0 | basilisk | 1.18.0 |
| basilisk.utils | 1.18.0 | batchelor | 1.22.0 |
| BatchJobs | 1.9 | BatchQC | 2.2.0 |
| batchtools | 0.9.17 | BayesKnockdown | 1.32.0 |
| bayesm | 3.1-6 | BayesSpace | 1.16.0 |
| bayNorm | 1.24.0 | baySeq | 2.40.0 |
| BB | 2019.10-1 | BBCAnalyzer | 1.36.0 |
| BBmisc | 1.13 | bbmle | 1.0.25.1 |
| bbotk | 1.5.0 | bcellViper | 1.42.0 |
| BCRANK | 1.68.0 | bcSeq | 1.28.0 |
| bdsmatrix | 1.3-7 | beachmat | 2.22.0 |
| beachmat.hdf5 | 1.4.0 | beadarray | 2.56.0 |
| beadarraySNP | 1.68.0 | BeadDataPackR | 1.58.0 |
| beanplot | 1.3.1 | BEARscc | 1.22.0 |
| BEAT | 1.44.0 | BEclear | 2.22.0 |
| BEDASSLE | 1.6.1 | beer | 1.10.0 |
| beeswarm | 0.4.0 | bench | 1.1.4 |
| benchdamic | 1.12.2 | benchmarkme | 1.0.8 |
| benchmarkmeData | 1.0.4 | bestNormalize | 1.9.1 |
| betareg | 3.2-2 | bezier | 1.1.2 |
| BG2 | 1.6.0 | BgeeCall | 1.22.0 |
| BgeeDB | 2.32.0 | bgx | 1.68.3 |
| BH | 1.87.0-1 | BHC | 1.54.0 |
| BiasedUrn | 2.0.12 | bibtex | 0.5.1 |
| BicARE | 1.64.0 | biclust | 2.0.3.1 |
| BiFET | 1.26.0 | biganalytics | 1.1.22 |
| bigassertr | 0.1.6 | BiGGR | 1.42.0 |
| biglm | 0.9-3 | bigmelon | 1.32.0 |
| bigmemory | 4.6.4 | bigmemory.sri | 0.1.8 |
| bigparallelr | 0.3.2 | bigrquery | 1.5.1 |
| bigstatsr | 1.6.1 | billboarder | 0.5.0 |
| BindingSiteFinder | 2.4.0 | binom | 1.1-1.1 |
| binr | 1.1.1 | bioassayR | 1.44.0 |
| Biobase | 2.66.0 | biobroom | 1.38.0 |
| biobtreeR | 1.18.0 | bioCancer | 1.34.0 |
| BioCartaImage | 1.4.0 | BiocBaseUtils | 1.8.0 |
| BiocBook | 1.4.0 | BiocCheck | 1.42.1 |
| BiocFHIR | 1.8.0 | BiocFileCache | 2.14.0 |
| BiocGenerics | 0.52.0 | biocGraph | 1.68.0 |
| BiocHail | 1.2.0 | BiocHubsShiny | 1.6.2 |
| BiocIO | 1.16.0 | BiocManager | 1.30.25 |
| BiocNeighbors | 2.0.1 | BioCor | 1.30.0 |
| BiocParallel | 1.40.0 | BiocPkgTools | 1.24.0 |
| BiocSet | 1.20.0 | BiocSingular | 1.22.0 |
| BiocSklearn | 1.28.0 | BiocStyle | 2.34.0 |
| biocthis | 1.16.0 | BiocVersion | 3.20.0 |
| biocViews | 1.74.0 | BiocWorkflowTools | 1.32.0 |
| biodb | 1.14.0 | biodbChebi | 1.12.0 |
| biodbExpasy | 1.6.0 | biodbHmdb | 1.12.0 |
| biodbKegg | 1.8.0 | biodbLipidmaps | 1.8.0 |
| biodbMirbase | 1.5.0 | biodbNcbi | 1.10.0 |
| biodbNci | 1.10.0 | biodbUniprot | 1.12.0 |
| bioDist | 1.78.0 | biomaRt | 2.62.1 |
| biomartr | 1.0.7 | biomformat | 1.34.0 |
| BioMVCClass | 1.74.0 | biomvRCNS | 1.46.0 |
| BioNAR | 1.8.1 | BioNERO | 1.14.0 |
| BioNet | 1.66.0 | BioNetStat | 1.22.0 |
| BioQC | 1.34.0 | biosigner | 1.34.0 |
| Biostrings | 2.74.1 | BioTIP | 1.20.0 |
| biotmle | 1.30.0 | biovizBase | 1.54.0 |
| BiRewire | 3.38.0 | biscuiteer | 1.20.0 |
| biscuiteerData | 1.20.0 | BiSeq | 1.46.0 |
| bit | 4.6.0 | bit64 | 4.6.0-1 |
| bitops | 1.0-9 | biwt | 1.0.1 |
| blacksheepr | 1.20.0 | bladderbatch | 1.44.0 |
| BlandAltmanLeh | 0.3.1 | blaster | 1.0.7 |
| blima | 1.40.0 | BLMA | 1.30.0 |
| blme | 1.0-6 | blob | 1.2.4 |
| blockmodeling | 1.1.5 | BloodGen3Module | 1.14.0 |
| bluster | 1.16.0 | BMA | 3.18.20 |
| bmp | 0.3 | bnbc | 1.28.0 |
| bnem | 1.14.0 | bnlearn | 5.0.2 |
| bnstruct | 1.0.15 | BOBaFIT | 1.10.0 |
| bookdown | 0.42 | BoolNet | 2.1.9 |
| bootstrap | 2019.6 | borealis | 1.10.0 |
| BoutrosLab.plotting.general | 7.1.2 | BPRMeth | 1.32.0 |
| BRAIN | 1.52.0 | brainflowprobes | 1.16.0 |
| branchpointer | 1.32.0 | bread | 0.4.1 |
| breakpointR | 1.24.0 | breakpointRdata | 1.24.0 |
| breastCancerVDX | 1.44.0 | brendaDb | 1.20.0 |
| brew | 1.0-10 | BRGenomics | 1.14.1 |
| brglm | 0.7.2 | BridgeDbR | 2.16.0 |
| brio | 1.1.5 | BRISC | 1.0.6 |
| broom | 1.0.7 | broom.helpers | 1.20.0 |
| broom.mixed | 0.2.9.6 | BrowserViz | 2.28.0 |
| bs4Dash | 2.3.4 | BSDA | 1.2.2 |
| BSgenome | 1.74.0 | BSgenome.Celegans.UCSC.ce2 | 1.4.0 |
| BSgenome.Drerio.UCSC.danRer7 | 1.4.0 | BSgenome.Ecoli.NCBI.20080805 | 1.3.1000 |
| BSgenome.Hsapiens.1000genomes.hs37d5 | 0.99.1 | BSgenome.Hsapiens.NCBI.GRCh38 | 1.3.1000 |
| BSgenome.Hsapiens.UCSC.hg18 | 1.3.1000 | BSgenome.Hsapiens.UCSC.hg19 | 1.4.3 |
| BSgenome.Hsapiens.UCSC.hg38 | 1.4.5 | BSgenome.Mmusculus.UCSC.mm10 | 1.4.3 |
| BSgenome.Mmusculus.UCSC.mm9 | 1.4.0 | BSgenomeForge | 1.6.0 |
| bsicons | 0.1.2 | bslib | 0.9.0 |
| bsplus | 0.1.4 | bsseq | 1.42.0 |
| BubbleTree | 2.36.0 | BufferedMatrix | 1.70.0 |
| BufferedMatrixMethods | 1.70.0 | bugsigdbr | 1.12.3 |
| BUMHMM | 1.30.0 | bumphunter | 1.48.0 |
| BumpyMatrix | 1.14.0 | BUS | 1.62.0 |
| BUScorrect | 1.24.0 | BUSpaRse | 1.20.0 |
| BUSseq | 1.12.0 | butcher | 0.3.5 |
| BWStest | 0.2.3 | C50 | 0.1.8 |
| ca | 0.71.1 | cachem | 1.1.0 |
| CaDrA | 1.4.0 | CAEN | 1.14.0 |
| CAFE | 1.42.0 | CAGEfightR | 1.26.0 |
| cageminer | 1.12.0 | CAGEr | 2.12.0 |
| Cairo | 1.6-2 | calibrate | 1.7.7 |
| callr | 3.7.6 | calm | 1.20.0 |
| CAMERA | 1.62.0 | canceR | 1.40.0 |
| cancerclass | 1.50.0 | capushe | 1.1.2 |
| car | 3.1-3 | carData | 3.0-5 |
| cardelino | 1.8.0 | Cardinal | 3.8.3 |
| CardinalIO | 1.4.0 | cards | 0.5.1 |
| caret | 7.0-1 | caretEnsemble | 4.0.1 |
| CARNIVAL | 2.16.0 | casper | 2.40.0 |
| CATALYST | 1.30.2 | catdata | 1.2.4 |
| Category | 2.72.0 | categoryCompare | 1.50.0 |
| CatEncoders | 0.1.1 | caTools | 1.18.3 |
| CausalR | 1.38.0 | cba | 0.2-25 |
| cbaf | 1.28.0 | CBEA | 1.6.0 |
| cBioPortalData | 2.18.1 | CBNplot | 1.6.0 |
| cbpManager | 1.14.0 | ccaPP | 0.3.4 |
| ccdata | 1.32.0 | ccfindR | 1.26.0 |
| ccImpute | 1.8.0 | ccmap | 1.32.0 |
| CCP | 1.2 | CCPlotR | 1.4.0 |
| CCPROMISE | 1.32.0 | ccrepe | 1.42.0 |
| ccTensor | 1.0.2 | CDFt | 1.2 |
| CDI | 1.4.0 | celaref | 1.24.0 |
| celda | 1.22.1 | celestial | 1.4.6 |
| CellaRepertorium | 1.12.0 | CellBarcode | 1.12.0 |
| cellbaseR | 1.30.0 | CellBench | 1.22.0 |
| celldex | 1.16.0 | cellHTS2 | 2.66.0 |
| CelliD | 1.14.0 | cellity | 1.34.0 |
| CellMapper | 1.32.0 | cellmigRation | 1.14.0 |
| CellMixS | 1.22.0 | CellNOptR | 1.52.0 |
| cellranger | 1.1.0 | cellscape | 1.30.0 |
| CellScore | 1.26.0 | CellTrails | 1.24.0 |
| cellxgenedp | 1.10.0 | CEMiTool | 1.30.0 |
| censcyt | 1.14.0 | Cepo | 1.12.0 |
| ceRNAnetsim | 1.18.0 | CeTF | 1.18.0 |
| CexoR | 1.44.0 | CFAssay | 1.40.0 |
| cfdnakit | 1.4.0 | cfDNAPro | 1.12.0 |
| cfTools | 1.6.0 | cfToolsData | 1.4.0 |
| CGEN | 3.42.0 | CGHbase | 1.66.0 |
| CGHcall | 2.68.0 | cghMCR | 1.64.0 |
| CGHnormaliter | 1.60.0 | CGHregions | 1.64.0 |
| ChAMP | 2.36.0 | ChAMPdata | 2.38.0 |
| changepoint | 2.3 | changepoint.np | 1.0.5 |
| checkmate | 2.3.2 | ChemmineOB | 1.44.0 |
| ChemmineR | 3.58.0 | chemometrics | 1.4.4 |
| CHETAH | 1.22.0 | Chicago | 1.34.0 |
| chihaya | 1.6.0 | chimeraviz | 1.32.0 |
| ChIPanalyser | 1.28.0 | ChIPComp | 1.36.0 |
| chipenrich | 2.30.0 | chipenrich.data | 2.30.0 |
| ChIPexoQual | 1.30.0 | ChIPpeakAnno | 3.40.0 |
| ChIPQC | 1.42.0 | ChIPseeker | 1.42.1 |
| chipseq | 1.56.0 | ChIPseqR | 1.60.0 |
| ChIPsim | 1.60.0 | ChIPXpress | 1.50.0 |
| ChIPXpressData | 1.44.0 | chk | 0.10.0 |
| chopsticks | 1.72.0 | chromDraw | 2.36.0 |
| ChromHeatMap | 1.60.0 | chromhmmData | 0.99.2 |
| chromPlot | 1.34.0 | ChromSCape | 1.16.0 |
| chromstaR | 1.32.0 | chromstaRData | 1.32.0 |
| chromVAR | 1.28.0 | chron | 2.3-62 |
| CHRONOS | 1.34.0 | cicero | 1.24.0 |
| CIMICE | 1.14.0 | CINdex | 1.34.0 |
| circlize | 0.4.16 | circRNAprofiler | 1.20.0 |
| CircSeqAlignTk | 1.8.0 | CircStats | 0.2-6 |
| circular | 0.5-1 | cisPath | 1.46.0 |
| CiteFuse | 1.18.0 | Ckmeans.1d.dp | 4.3.5 |
| ClassifyR | 3.10.9 | classInt | 0.4-11 |
| cleanUpdTSeq | 1.44.0 | cleaver | 1.44.0 |
| clevRvis | 1.6.0 | cli | 3.6.4 |
| clippda | 1.56.0 | clipper | 1.46.0 |
| clipr | 0.8.0 | cliProfiler | 1.12.0 |
| cliqueMS | 1.20.0 | clisymbols | 1.2.0 |
| clock | 0.7.3 | Clomial | 1.42.0 |
| clst | 1.54.0 | clstutils | 1.54.0 |
| clue | 0.3-66 | CluMSID | 1.22.0 |
| clustComp | 1.34.0 | clusterCons | 1.2 |
| clusterCrit | 1.3.0 | clusterExperiment | 2.26.0 |
| ClusterJudge | 1.28.0 | clusterProfiler | 4.14.6 |
| ClusterR | 1.3.3 | clusterRepro | 0.9 |
| clusterSeq | 1.30.0 | ClusterSignificance | 1.34.0 |
| clusterSim | 0.51-5 | clusterStab | 1.78.0 |
| clustifyr | 1.18.0 | ClustIRR | 1.4.0 |
| clustree | 0.5.1 | clustvarsel | 2.3.4 |
| clv | 0.3-2.4 | clValid | 0.7 |
| CMA | 1.64.0 | cMAP | 1.15.1 |
| cMap2data | 1.42.0 | cmapR | 1.18.0 |
| cmdfun | 1.0.2 | cn.farms | 1.54.0 |
| cn.mops | 1.52.0 | CNAnorm | 1.52.0 |
| CNEr | 1.42.0 | CNORdt | 1.48.0 |
| CNORfeeder | 1.46.0 | CNORfuzzy | 1.48.0 |
| CNORode | 1.48.0 | CNTools | 1.62.0 |
| CNVfilteR | 1.20.0 | cnvGSA | 1.50.0 |
| CNViz | 1.14.0 | CNVMetrics | 1.10.0 |
| CNVPanelizer | 1.38.0 | CNVRanger | 1.22.0 |
| CNVrd2 | 1.44.0 | cobs | 1.3-9 |
| CoCiteStats | 1.78.0 | COCOA | 2.20.0 |
| coda | 0.19-4.1 | CodeDepends | 0.6.6 |
| codelink | 1.74.0 | CODEX | 1.38.0 |
| codingMatrices | 0.4.0 | CoGAPS | 3.26.0 |
| cogena | 1.40.0 | cogeqc | 1.10.0 |
| Cogito | 1.12.0 | coGPS | 1.50.0 |
| COHCAP | 1.48.0 | COHCAPanno | 1.42.0 |
| coin | 1.4-3 | cola | 2.12.0 |
| collapse | 2.1.0 | collections | 0.3.7 |
| colorRamps | 2.3.4 | colorspace | 2.1-1 |
| colourpicker | 1.3.0 | colourvalues | 0.3.9 |
| comapr | 1.10.0 | combi | 1.18.0 |
| combinat | 0.0-8 | coMET | 1.34.0 |
| coMethDMR | 1.10.0 | common | 1.1.3 |
| commonmark | 1.9.5 | compareGroups | 4.9.1 |
| COMPASS | 1.44.0 | compcodeR | 1.42.0 |
| compEpiTools | 1.40.0 | ComplexHeatmap | 2.22.0 |
| ComplexUpset | 1.3.3 | compositions | 2.0-8 |
| CompoundDb | 1.10.0 | CompQuadForm | 1.4.3 |
| ComPrAn | 1.14.0 | compSPOT | 1.4.0 |
| concaveman | 1.1.0 | conclust | 1.1 |
| concordexR | 1.6.0 | condformat | 0.10.1 |
| condiments | 1.14.0 | CONFESS | 1.34.0 |
| config | 0.3.2 | configr | 0.3.5 |
| confintr | 1.0.2 | conflicted | 1.2.0 |
| conicfit | 1.0.4 | consensus | 1.24.0 |
| ConsensusClusterPlus | 1.70.0 | consensusDE | 1.24.0 |
| consensusOV | 1.24.0 | consensusSeekeR | 1.34.0 |
| consICA | 2.4.0 | ConsRank | 2.1.4 |
| CONSTANd | 1.14.0 | contiBAIT | 1.30.0 |
| contrast | 0.24.2 | conumee | 1.40.0 |
| convert | 1.82.0 | coop | 0.6-3 |
| copa | 1.74.0 | copula | 1.1-6 |
| CopyNumberPlots | 1.22.0 | coRdon | 1.24.0 |
| CoreGx | 2.10.0 | Cormotif | 1.52.0 |
| corncob | 0.4.1 | coro | 1.1.0 |
| corpcor | 1.6.10 | corral | 1.16.0 |
| CORREP | 1.68.0 | corrgram | 1.14 |
| corrplot | 0.95 | coseq | 1.30.0 |
| CoSIA | 1.6.0 | COSMIC.67 | 1.42.0 |
| cosmiq | 1.40.0 | cosmosR | 1.14.0 |
| COSNet | 1.40.0 | COTAN | 2.6.3 |
| countrycode | 1.6.0 | countsimQC | 1.24.0 |
| covEB | 1.32.0 | CoverageView | 1.44.0 |
| covr | 3.6.4 | covRNA | 1.32.0 |
| cowplot | 1.1.3 | cp4p | 0.3.6 |
| cplm | 0.7-12.1 | cpp11 | 0.5.2 |
| cpp11bigwig | 0.1.1 | cpvSNP | 1.38.0 |
| cqn | 1.52.0 | crayon | 1.5.3 |
| credentials | 2.0.2 | CRImage | 1.54.0 |
| crisprBase | 1.10.0 | crisprBowtie | 1.10.0 |
| crisprBwa | 1.10.0 | crisprDesign | 1.8.0 |
| crisprScore | 1.10.0 | crisprScoreData | 1.10.0 |
| CRISPRseek | 1.46.0 | CrispRVariants | 1.34.0 |
| crisprVerse | 1.8.0 | crisprViz | 1.8.0 |
| crlmm | 1.64.1 | crmn | 0.0.21 |
| crossmeta | 1.28.0 | crosstalk | 1.2.1 |
| crul | 1.5.0 | CSAR | 1.58.0 |
| csaw | 1.40.0 | csdR | 1.12.0 |
| CSSQ | 1.18.0 | ctc | 1.80.0 |
| CTdata | 1.6.0 | CTDquerier | 2.14.0 |
| cTRAP | 1.24.0 | ctsGE | 1.32.0 |
| CTSV | 1.8.0 | cubature | 2.1.1 |
| Cubist | 0.4.4 | cummeRbund | 2.48.0 |
| CuratedAtlasQueryR | 1.4.0 | curatedTCGAData | 1.28.1 |
| curl | 6.2.1 | customCMPdb | 1.16.0 |
| customProDB | 1.46.0 | cvar | 0.5 |
| cvAUC | 1.1.4 | cvTools | 0.3.3 |
| CVXR | 1.0-15 | cyanoFilter | 1.14.0 |
| cycle | 1.60.0 | cyclocomp | 1.1.1 |
| cydar | 1.30.0 | CytoDx | 1.26.0 |
| CyTOFpower | 1.8.0 | cytofQC | 1.6.0 |
| CytoGLMM | 1.14.0 | cytoKernel | 1.12.0 |
| cytolib | 2.18.2 | cytomapper | 1.18.0 |
| cytoMEM | 1.10.0 | cytometree | 2.0.2 |
| CytoML | 2.18.3 | CytoPipeline | 1.6.0 |
| CytoPipelineGUI | 1.4.0 | cytoviewer | 1.6.0 |
| dada2 | 1.34.0 | dagLogo | 1.44.0 |
| daMA | 1.78.0 | DAMEfinder | 1.18.0 |
| DaMiRseq | 2.18.0 | DAPAR | 1.38.0 |
| DAPARdata | 1.36.0 | DART | 1.54.0 |
| dashboardthemes | 1.1.6 | data.table | 1.17.0 |
| data.tree | 1.1.0 | datamods | 1.5.3 |
| DataVisualizations | 1.3.3 | datawizard | 1.0.1 |
| DBI | 1.2.3 | dbplyr | 2.5.0 |
| dbscan | 1.2.2 | dcanr | 1.22.0 |
| DCATS | 1.4.0 | dce | 1.13.0 |
| dcGSA | 1.34.0 | ddCt | 1.62.0 |
| ddPCRclust | 1.26.0 | DDRTree | 0.1.5 |
| dearseq | 1.18.0 | debCAM | 1.24.0 |
| debrowser | 1.34.0 | DECIPHER | 3.2.0 |
| decompTumor2Sig | 2.22.0 | DeconRNASeq | 1.48.0 |
| deconstructSigs | 1.8.0 | decontam | 1.26.0 |
| decontX | 1.4.1 | deconvR | 1.12.0 |
| decoupleR | 2.12.0 | DeepPINCS | 1.14.0 |
| deepSNV | 1.52.0 | DEFormats | 1.34.0 |
| DegNorm | 1.16.0 | DEGraph | 1.58.0 |
| DEGreport | 1.42.0 | DEGseq | 1.60.0 |
| Delaporte | 8.4.1 | DelayedArray | 0.32.0 |
| DelayedDataFrame | 1.22.0 | DelayedMatrixStats | 1.28.1 |
| DelayedRandomArray | 1.14.0 | DelayedTensor | 1.12.0 |
| deldir | 2.0-4 | DELocal | 1.6.0 |
| deltaCaptureC | 1.20.0 | deltaGseg | 1.46.0 |
| DeMAND | 1.36.0 | DeMixT | 1.22.0 |
| demuxmix | 1.8.0 | demuxSNP | 1.4.0 |
| dendextend | 1.19.0 | densEstBayes | 1.0-2.2 |
| densvis | 1.16.0 | DEoptimR | 1.1-3-1 |
| DEP | 1.28.0 | DepecheR | 1.22.0 |
| DepInfeR | 1.10.0 | depmap | 1.20.0 |
| depmixS4 | 1.5-0 | DEqMS | 1.24.0 |
| derfinder | 1.40.0 | derfinderHelper | 1.40.0 |
| derfinderPlot | 1.40.0 | Deriv | 4.1.6 |
| desc | 1.4.3 | DEScan2 | 1.26.0 |
| DescTools | 0.99.59 | DESeq2 | 1.46.0 |
| DEsingle | 1.26.0 | deSolve | 1.40 |
| DESpace | 1.6.0 | destiny | 3.20.0 |
| DEsubs | 1.32.0 | detectseparation | 0.3 |
| devtools | 2.4.5 | DEWSeq | 1.20.0 |
| DExMA | 1.14.0 | DExMAdata | 1.14.0 |
| DEXSeq | 1.52.0 | DFP | 1.64.0 |
| DGEobj | 1.1.2 | DGEobj.utils | 1.0.6 |
| dgof | 1.5.1 | diagram | 1.6.5 |
| DiagrammeR | 1.0.11 | DIAlignR | 2.10.0 |
| diceR | 3.0.0 | dichromat | 2.0-0.1 |
| DiffBind | 3.16.0 | diffcoexp | 1.26.0 |
| DiffCorr | 0.4.4 | diffcyt | 1.26.1 |
| DifferentialRegulation | 2.4.0 | diffGeneAnalysis | 1.88.0 |
| diffHic | 1.38.0 | DiffLogo | 2.30.0 |
| diffobj | 0.3.5 | diffr | 0.1 |
| diffuStats | 1.26.0 | diffUTR | 1.14.0 |
| digest | 0.6.37 | diggit | 1.38.0 |
| Dino | 1.12.0 | diptest | 0.77-1 |
| dir.expiry | 1.14.0 | directlabels | 2024.1.21 |
| Director | 1.32.0 | directPA | 1.5.1 |
| DirichletMultinomial | 1.48.0 | DirichletReg | 0.7-1 |
| dirmult | 0.1.3-5 | discordant | 1.30.0 |
| DiscoRhythm | 1.22.0 | distances | 0.1.11 |
| distillery | 1.2-2 | distinct | 1.18.0 |
| distr | 2.9.7 | distrEx | 2.9.6 |
| distributional | 0.5.0 | distributions3 | 0.2.2 |
| dittoSeq | 1.18.0 | divergence | 1.22.0 |
| dixonTest | 1.0.4 | dks | 1.52.0 |
| DMCFB | 1.20.0 | DMCHMM | 1.28.0 |
| dml | 1.1.0 | DMRcaller | 1.38.0 |
| DMRcate | 3.2.1 | DMRScan | 1.28.0 |
| dmrseq | 1.26.0 | DMwR2 | 0.0.2 |
| DNABarcodeCompatibility | 1.22.0 | DNABarcodes | 1.36.0 |
| DNAcopy | 1.80.0 | DNAfusion | 1.8.0 |
| DNAshapeR | 1.34.0 | dnet | 1.1.7 |
| doBy | 4.6.25 | docopt | 0.7.1 |
| doFuture | 1.0.2 | doMC | 1.3.8 |
| DominoEffect | 1.26.0 | doParallel | 1.0.17 |
| doppelgangR | 1.34.0 | doRNG | 1.8.6.1 |
| dorothea | 1.18.0 | Doscheda | 1.28.0 |
| DOSE | 4.0.0 | doseR | 1.22.0 |
| doSNOW | 1.0.20 | dotCall64 | 1.2 |
| doubletrouble | 1.6.1 | downlit | 0.4.4 |
| downloader | 0.4 | downloadthis | 0.4.1 |
| dplyr | 1.1.4 | dqrng | 0.4.1 |
| drawer | 0.2.0.1 | drawProteins | 1.26.0 |
| drc | 3.0-1 | dreamlet | 1.4.1 |
| DrImpute | 1.0 | DRIMSeq | 1.34.0 |
| DriverNet | 1.46.0 | DropletUtils | 1.26.0 |
| drtmle | 1.1.2 | drugTargetInteractions | 1.14.0 |
| DrugVsDisease | 2.48.0 | DrugVsDiseasedata | 1.42.0 |
| DSS | 2.54.0 | dStruct | 1.12.0 |
| DT | 0.33 | DTA | 2.52.0 |
| dtangle | 2.0.9 | dtplyr | 1.3.1 |
| dtt | 0.1-2 | dtw | 1.23-1 |
| duckdb | 1.2.1 | Dune | 1.18.0 |
| dunn.test | 1.3.6 | dupRadar | 1.36.0 |
| dyebias | 1.66.0 | dynamicTreeCut | 1.63-1 |
| DynDoc | 1.84.0 | e1071 | 1.7-16 |
| earth | 5.3.4 | easier | 1.12.0 |
| easierData | 1.12.0 | easycsv | 1.0.8 |
| easylift | 1.4.0 | easyPubMed | 2.13 |
| easyreporting | 1.18.0 | easyRNASeq | 2.42.0 |
| EBarrays | 2.70.0 | EBcoexpress | 1.50.0 |
| EBImage | 4.48.0 | EBSEA | 1.34.0 |
| EBSeq | 2.4.0 | EBSeqHMM | 1.35.0 |
| echarts4r | 0.4.5 | ecolitk | 1.78.0 |
| ECOSolveR | 0.5.5 | ecp | 3.1.6 |
| Ecume | 0.9.2 | EDASeq | 2.40.0 |
| edge | 2.38.0 | edgeR | 4.4.2 |
| EDIRquery | 1.6.0 | eds | 1.8.0 |
| effsize | 0.8.1 | EGAD | 1.34.0 |
| egg | 0.4.5 | EGSEA | 1.34.0 |
| EGSEAdata | 1.34.0 | einsum | 0.1.2 |
| eiR | 1.46.0 | eisaR | 1.18.0 |
| elasticnet | 1.3 | elitism | 1.1.1 |
| ellipse | 0.5.0 | ellipsis | 0.3.2 |
| ELMER | 2.30.0 | ELMER.data | 2.30.0 |
| emdbook | 1.3.13 | emdist | 0.3-3 |
| EMDomics | 2.36.0 | emmeans | 1.11.0 |
| EmpiricalBrownsMethod | 1.34.0 | energy | 1.7-12 |
| english | 1.2-6 | EnhancedVolcano | 1.24.0 |
| enhancerHomologSearch | 1.12.0 | EnMCB | 1.18.0 |
| ENmix | 1.42.2 | EnrichedHeatmap | 1.36.0 |
| EnrichmentBrowser | 2.36.0 | enrichplot | 1.26.6 |
| enrichR | 3.4 | enrichTF | 1.18.0 |
| enrichViewNet | 1.4.0 | EnsDb.Hsapiens.v75 | 2.99.0 |
| EnsDb.Hsapiens.v79 | 2.99.0 | EnsDb.Hsapiens.v86 | 2.99.0 |
| EnsDb.Mmusculus.v79 | 2.99.0 | ensembldb | 2.30.0 |
| ensemblVEP | 1.44.0 | ensurer | 1.1 |
| entropy | 1.3.1 | enviPat | 2.6 |
| EnvStats | 3.0.0 | epialleleR | 1.14.0 |
| EpiCompare | 1.10.1 | epidecodeR | 1.14.0 |
| EpiDISH | 2.22.0 | epigenomix | 1.46.0 |
| epigraHMM | 1.14.0 | EpiMix | 1.8.0 |
| EpiMix.data | 1.8.0 | epimutacions | 1.10.0 |
| epimutacionsData | 1.10.0 | epiNEM | 1.30.0 |
| epiR | 2.0.80 | epistack | 1.12.0 |
| epistasisGA | 1.8.0 | EpiTxDb | 1.18.0 |
| epivizr | 2.36.0 | epivizrChart | 1.28.0 |
| epivizrData | 1.34.0 | epivizrServer | 1.34.0 |
| epivizrStandalone | 1.34.0 | erccdashboard | 1.40.0 |
| erma | 1.22.0 | ERSSA | 1.24.0 |
| esATAC | 1.28.0 | escape | 2.2.3 |
| escheR | 1.6.0 | esetVis | 1.32.0 |
| estimability | 1.5.1 | etrunct | 0.1 |
| eudysbiome | 1.36.0 | eulerr | 7.0.2 |
| eva | 0.2.6 | evaluate | 1.0.3 |
| evaluomeR | 1.22.0 | evd | 2.3-7.1 |
| EventPointer | 3.14.0 | evmix | 2.12 |
| EWCE | 1.14.0 | ewceData | 1.14.0 |
| Exact | 3.3 | exactRankTests | 0.8-35 |
| excelR | 0.4.0 | ExCluster | 1.24.0 |
| ExiMiR | 2.48.0 | exomeCopy | 1.48.0 |
| exomePeak2 | 1.14.3 | ExperimentHub | 2.14.0 |
| ExperimentHubData | 1.32.0 | ExperimentSubset | 1.16.0 |
| ExploreModelMatrix | 1.18.0 | expm | 1.0-0 |
| ExpressionAtlas | 1.34.0 | ExtDist | 0.7-2 |
| extraChIPs | 1.10.0 | extraDistr | 1.10.0 |
| extrafont | 0.19 | extrafontdb | 1.0 |
| extRemes | 2.2 | EZtune | 3.1.1 |
| faahKO | 1.46.0 | fabia | 2.52.0 |
| fabricatr | 1.0.2 | factDesign | 1.82.0 |
| factoextra | 1.0.7 | FactoMineR | 2.11 |
| factR | 1.8.0 | FamAgg | 1.34.0 |
| famat | 1.16.0 | fANCOVA | 0.6-1 |
| fansi | 1.0.6 | farver | 2.1.2 |
| fastcluster | 1.2.6 | fastDummies | 1.7.5 |
| fastICA | 1.2-7 | fastLiquidAssociation | 1.42.0 |
| fastmap | 1.2.0 | fastmatch | 1.1-6 |
| FastqCleaner | 1.24.0 | fastreeR | 1.10.0 |
| fastseg | 1.52.0 | fauxpas | 0.5.2 |
| fBasics | 4041.97 | fCCAC | 1.32.0 |
| fCI | 1.36.0 | FCPS | 1.3.4 |
| fcScan | 1.20.0 | fda | 6.2.0 |
| FDb.InfiniumMethylation.hg19 | 2.2.0 | fdrame | 1.78.0 |
| fdrtool | 1.2.18 | fds | 1.8 |
| FEAST | 1.14.0 | FeatSeekR | 1.6.0 |
| feature | 1.2.15 | fedup | 1.14.0 |
| FELLA | 1.26.0 | fenr | 1.4.2 |
| ff | 4.5.2 | ffpe | 1.50.0 |
| fftw | 1.0-9 | fftwtools | 0.9-11 |
| fGarch | 4033.92 | fgga | 1.14.0 |
| FGNet | 3.40.0 | fgsea | 1.32.2 |
| fields | 16.3.1 | filehash | 2.4-6 |
| filelock | 1.0.3 | filematrix | 1.3 |
| fillpattern | 1.0.2 | FilterFFPE | 1.16.0 |
| FindIT2 | 1.12.0 | findpython | 1.0.9 |
| fingerprint | 3.5.7 | FIs | 1.34.0 |
| FISHalyseR | 1.40.0 | fishpond | 2.12.0 |
| fission | 1.26.0 | fit.models | 0.64 |
| fitdistrplus | 1.2-2 | FitHiC | 1.32.0 |
| flagme | 1.62.0 | FLAMES | 2.0.2 |
| flashClust | 1.01-2 | flatxml | 0.1.1 |
| flexclust | 1.5.0 | flexdashboard | 0.6.2 |
| flexmix | 2.3-20 | flextable | 0.9.7 |
| float | 0.3-3 | flock | 0.7 |
| flowAI | 1.36.0 | flowBeads | 1.44.0 |
| flowBin | 1.42.0 | flowcatchR | 1.40.0 |
| flowCHIC | 1.40.0 | flowClean | 1.44.0 |
| flowClust | 3.44.0 | flowCore | 2.18.0 |
| flowCut | 1.16.0 | flowCyBar | 1.42.0 |
| flowDensity | 1.40.0 | flowFP | 1.64.0 |
| flowGate | 1.6.0 | flowGraph | 1.14.0 |
| flowMatch | 1.42.0 | flowMeans | 1.66.0 |
| flowMerge | 2.54.0 | flowPeaks | 1.52.0 |
| flowPloidy | 1.32.0 | flowPlots | 1.54.0 |
| FlowSOM | 2.14.0 | FlowSorted.Blood.450k | 1.44.0 |
| flowSpecs | 1.20.0 | flowStats | 4.18.0 |
| flowTime | 1.30.0 | flowTrans | 1.58.0 |
| flowViz | 1.70.0 | flowVS | 1.38.0 |
| flowWorkspace | 4.18.1 | fmcsR | 1.48.0 |
| FME | 1.3.6.3 | fmrs | 1.16.0 |
| fmsb | 0.7.6 | FMStable | 0.1-4 |
| FNN | 1.1.4.1 | fobitools | 1.14.0 |
| fontawesome | 0.5.3 | fontBitstreamVera | 0.1.1 |
| fontLiberation | 0.1.0 | fontquiver | 0.2.1 |
| forcats | 1.0.0 | foreach | 1.5.2 |
| forecast | 8.23.0 | forestplot | 3.1.6 |
| formatR | 1.14 | formattable | 0.2.1 |
| Formula | 1.2-5 | formula.tools | 1.7.1 |
| fpc | 2.2-13 | fracdiff | 1.5-3 |
| fractional | 0.1.3 | FRASER | 2.2.0 |
| frenchFISH | 1.18.0 | FreqProf | 0.0.1 |
| fresh | 0.2.1 | FRGEpistasis | 1.42.0 |
| frma | 1.58.0 | frmaTools | 1.58.0 |
| fs | 1.6.5 | FSA | 0.9.6 |
| FSelector | 0.34 | fst | 0.9.8 |
| fstcore | 0.10.0 | FunChIP | 1.28.0 |
| funtooNorm | 1.30.0 | furrr | 0.3.1 |
| FuseSOM | 1.8.0 | futile.logger | 1.4.3 |
| futile.options | 1.0.1 | future | 1.34.0 |
| future.apply | 1.11.3 | fuzzyjoin | 0.1.6 |
| GA | 3.2.4 | GA4GHclient | 1.30.0 |
| GA4GHshiny | 1.28.0 | gaga | 2.52.0 |
| gage | 2.56.0 | gaggle | 1.70.0 |
| gam | 1.22-5 | gamlss | 5.4-22 |
| gamlss.data | 6.0-6 | gamlss.dist | 6.1-1 |
| gap | 1.6 | gap.datasets | 0.0.6 |
| GAprediction | 1.32.0 | garfield | 1.34.0 |
| gargle | 1.5.2 | GARS | 1.26.0 |
| GateFinder | 1.26.0 | gatom | 1.4.0 |
| gbm | 2.2.2 | GBScleanR | 2.0.3 |
| gbutils | 0.5 | gcapc | 1.30.0 |
| gcatest | 2.6.0 | gclus | 1.3.2 |
| gCrisprTools | 2.12.0 | gcrma | 2.78.0 |
| gcspikelite | 1.44.0 | gdata | 3.0.1 |
| GDCRNATools | 1.26.0 | gDNAx | 1.4.1 |
| gDR | 1.4.1 | gDRcore | 1.4.4 |
| gDRimport | 1.4.6 | gDRstyle | 1.4.3 |
| gDRutils | 1.4.10 | GDSArray | 1.26.0 |
| gdsfmt | 1.42.1 | gdtools | 0.4.1 |
| geeM | 0.10.1 | geepack | 1.3.12 |
| geigen | 2.3 | GEM | 1.32.0 |
| gemini | 1.20.0 | gemma.R | 3.2.1 |
| genalg | 0.2.1 | genArise | 1.82.0 |
| geneAttribution | 1.32.0 | GeneBreak | 1.36.0 |
| geneClassifiers | 1.30.0 | GeneExpressionSignature | 1.52.0 |
| genefilter | 1.88.0 | genefu | 2.34.0 |
| GeneGA | 1.56.0 | GeneGeneInteR | 1.32.0 |
| geneLenDataBase | 1.42.0 | GeneMeta | 1.78.0 |
| GeneNet | 1.2.16 | GeneNetworkBuilder | 1.48.0 |
| GeneOverlap | 1.42.0 | geneplast | 1.32.0 |
| geneplotter | 1.84.0 | geneRecommender | 1.78.0 |
| GeneRegionScan | 1.62.0 | generics | 0.1.3 |
| geneRxCluster | 1.42.0 | GeneSelectMMD | 2.50.0 |
| GENESIS | 2.36.0 | GeneStructureTools | 1.26.0 |
| geNetClassifier | 1.46.0 | genetics | 1.3.8.1.3 |
| GeneticsPed | 1.68.0 | GeneTonic | 3.0.0 |
| geneXtendeR | 1.32.0 | GENIE3 | 1.28.0 |
| genieclust | 1.1.6 | genlasso | 1.6.1 |
| GENLIB | 1.1.10 | genoCN | 1.58.0 |
| genomation | 1.38.0 | GenomAutomorphism | 1.8.1 |
| GenomeInfoDb | 1.42.3 | GenomeInfoDbData | 1.2.13 |
| genomeIntervals | 1.62.0 | genomes | 3.36.0 |
| GenomicAlignments | 1.42.0 | GenomicDataCommons | 1.30.1 |
| GenomicDistributions | 1.14.0 | GenomicFeatures | 1.58.0 |
| GenomicFiles | 1.42.0 | genomicInstability | 1.12.0 |
| GenomicInteractionNodes | 1.10.0 | GenomicInteractions | 1.40.0 |
| GenomicOZone | 1.20.0 | GenomicPlot | 1.4.0 |
| GenomicRanges | 1.58.0 | GenomicScores | 2.18.1 |
| GenomicState | 0.99.15 | GenomicSuperSignature | 1.14.0 |
| GenomicTools.fileHandler | 0.1.5.9 | GenomicTuples | 1.40.0 |
| GenProSeq | 1.10.0 | GenSA | 1.1.14.1 |
| GenVisR | 1.38.0 | GeoDiff | 1.12.0 |
| GEOexplorer | 1.12.0 | GEOfastq | 1.14.0 |
| GEOmetadb | 1.68.1 | geometries | 0.2.4 |
| geometry | 0.5.2 | GeomxTools | 3.10.0 |
| GEOquery | 2.74.0 | geosphere | 1.5-20 |
| GEOsubmission | 1.58.0 | GeoTcgaData | 2.6.0 |
| gep2pep | 1.26.0 | gert | 2.1.4 |
| gespeR | 1.34.0 | getDEE2 | 1.16.2 |
| getopt | 1.20.4 | GetoptLong | 1.0.5 |
| getPass | 0.2-4 | geva | 1.14.0 |
| GEWIST | 1.50.0 | gfonts | 0.2.0 |
| gg4way | 1.4.0 | ggalluvial | 0.12.5 |
| GGally | 2.2.1 | ggalt | 0.4.0 |
| gganimate | 1.0.9 | ggbeeswarm | 0.7.2 |
| ggbio | 1.54.0 | ggbump | 0.1.0 |
| ggcorrplot | 0.1.4.1 | ggcyto | 1.34.0 |
| ggdendro | 0.2.0 | ggdist | 3.3.2 |
| ggExtra | 0.10.1 | ggfittext | 0.10.2 |
| ggforce | 0.4.2 | ggformula | 0.12.0 |
| ggfortify | 0.4.17 | ggfun | 0.1.8 |
| gggenes | 0.5.1 | ggh4x | 0.3.0 |
| gghalves | 0.1.4 | gghighlight | 0.4.1 |
| ggimage | 0.3.3 | ggiraph | 0.8.12 |
| ggkegg | 1.4.1 | ggm | 2.5.1 |
| ggmanh | 1.10.0 | ggmcmc | 1.5.1.1 |
| ggmsa | 1.12.0 | ggnetwork | 0.5.13 |
| ggnewscale | 0.5.1 | GGPA | 1.18.0 |
| ggplot.multistats | 1.0.1 | ggplot2 | 3.5.1 |
| ggplotify | 0.1.2 | ggpmisc | 0.6.1 |
| ggpointdensity | 0.1.0 | ggpp | 0.5.8-1 |
| ggprism | 1.0.5 | ggpubr | 0.6.0 |
| ggraph | 2.2.1 | ggrastr | 1.0.2 |
| ggrepel | 0.9.6 | ggridges | 0.5.6 |
| ggsc | 1.4.0 | ggsci | 3.2.0 |
| ggseqlogo | 0.2 | ggside | 0.3.1 |
| ggsignif | 0.6.4 | ggspavis | 1.12.0 |
| ggstar | 1.0.4 | ggstats | 0.9.0 |
| ggtangle | 0.0.6 | ggtext | 0.1.2 |
| ggthemes | 5.1.0 | ggtree | 3.14.0 |
| ggtreeDendro | 1.8.0 | ggtreeExtra | 1.16.0 |
| ggupset | 0.4.1 | ggvenn | 0.1.10 |
| ggvis | 0.4.9 | ggwordcloud | 0.6.2 |
| gh | 1.4.1 | GIGSEA | 1.24.0 |
| girafe | 1.58.0 | GISPA | 1.26.0 |
| gistr | 0.9.0 | git2r | 0.35.0 |
| gitcreds | 0.1.2 | GLAD | 2.70.0 |
| GladiaTOX | 1.22.0 | glasso | 1.11 |
| gld | 2.6.7 | Glimma | 2.16.0 |
| glm2 | 1.2.1 | glmGamPoi | 1.18.0 |
| glmmTMB | 1.1.10 | glmnet | 4.1-8 |
| glmpca | 0.2.0 | glmSparseNet | 1.24.0 |
| GlobalAncova | 4.24.0 | GlobalOptions | 0.1.2 |
| globals | 0.16.3 | globalSeq | 1.34.0 |
| globaltest | 5.60.0 | GloScope | 1.4.0 |
| glue | 1.8.0 | gmapR | 1.48.0 |
| GmicR | 1.20.0 | gmm | 1.8 |
| gmodels | 2.19.1 | gmoviz | 1.18.0 |
| gmp | 0.7-5 | GMRP | 1.34.0 |
| GNET2 | 1.22.0 | gnm | 1.1-5 |
| GNOSIS | 1.4.0 | GO.db | 3.20.0 |
| GOexpress | 1.40.0 | GoFKernel | 2.1-3 |
| goftest | 1.2-3 | GOfuncR | 1.26.0 |
| golem | 0.5.1 | googleAuthR | 2.0.2 |
| googledrive | 2.1.1 | googlesheets4 | 1.1.1 |
| googleVis | 0.7.3 | GOpro | 1.32.0 |
| goProfiles | 1.68.0 | GOSemSim | 2.32.0 |
| goseq | 1.58.0 | GOSim | 1.40.0 |
| goSorensen | 1.8.0 | goSTAG | 1.30.0 |
| GOstats | 2.72.0 | GOsummaries | 2.37.0 |
| GOTHiC | 1.42.0 | goTools | 1.80.0 |
| gower | 1.0.2 | GPA | 1.18.0 |
| GPArotation | 2024.3-1 | gplots | 3.2.0 |
| gpls | 1.78.0 | gProfileR | 0.7.0 |
| gprofiler2 | 0.2.3 | gpuMagic | 1.22.0 |
| gRain | 1.4.5 | GRaNIE | 1.10.0 |
| granulator | 1.14.0 | graper | 1.22.0 |
| graph | 1.84.1 | GraphAlignment | 1.70.0 |
| GraphAT | 1.78.0 | graphite | 1.52.0 |
| graphlayouts | 1.2.2 | GraphPAC | 1.44.0 |
| gRbase | 2.0.3 | GRENITS | 1.58.0 |
| GreyListChIP | 1.38.0 | gridBase | 0.4-7 |
| gridExtra | 2.3 | gridGraphics | 0.5-1 |
| gridSVG | 1.7-5 | gridtext | 0.1.5 |
| grImport | 0.9-7 | GRmetrics | 1.32.0 |
| groHMM | 1.40.3 | grr | 0.9.5 |
| GSA | 1.03.3 | GSALightning | 1.34.0 |
| GSAR | 1.40.0 | GSCA | 2.36.0 |
| gscreend | 1.20.0 | GSEABase | 1.68.0 |
| GSEABenchmarkeR | 1.26.0 | GSEAlm | 1.66.0 |
| GSEAmining | 1.16.0 | gsean | 1.26.0 |
| GSgalgoR | 1.16.0 | gsignal | 0.3-7 |
| gsl | 2.1-8 | gsmoothr | 0.1.7 |
| gson | 0.1.0 | GSReg | 1.40.0 |
| GSRI | 2.54.0 | gss | 2.2-8 |
| gstat | 2.1-3 | gsubfn | 0.7 |
| GSVA | 2.0.6 | GSVAdata | 1.42.0 |
| gtable | 0.3.6 | gtools | 3.9.5 |
| gtrellis | 1.38.0 | GUIDEseq | 1.36.0 |
| Guitar | 2.22.0 | GUniFrac | 1.8 |
| Gviz | 1.50.0 | GWAS.BAYES | 1.16.0 |
| gwascat | 2.38.0 | GWASExactHW | 1.2 |
| GWASTools | 1.52.0 | gwasurvivr | 1.24.0 |
| GWENA | 1.16.0 | gypsum | 1.2.0 |
| h5vc | 2.40.1 | h5vcData | 2.26.0 |
| hapFabia | 1.48.0 | hardhat | 1.4.1 |
| HardyWeinberg | 1.7.8 | Harman | 1.34.0 |
| harmonicmeanp | 3.0.1 | HarmonizR | 1.4.0 |
| harmony | 1.2.3 | Harshlight | 1.78.0 |
| hash | 2.2.6.3 | haven | 2.5.4 |
| hca | 1.14.0 | HDCI | 1.0-2 |
| HDF5Array | 1.34.0 | hdf5r | 1.3.12 |
| HDInterval | 0.2.4 | HDO.db | 1.0.0 |
| hdrcde | 3.4 | HDTD | 1.40.0 |
| heatmap3 | 1.1.9 | heatmaply | 1.5.0 |
| heatmaps | 1.30.0 | Heatplus | 3.14.0 |
| HelloRanges | 1.32.0 | HELP | 1.64.0 |
| HEM | 1.78.0 | here | 1.0.1 |
| hermes | 1.10.0 | HERON | 1.4.0 |
| Herper | 1.16.0 | hexbin | 1.28.5 |
| HGC | 1.14.0 | HGNChelper | 0.8.15 |
| hgu133a.db | 3.13.0 | hgu133a2.db | 3.13.0 |
| hgu133plus2.db | 3.13.0 | hgu95a.db | 3.13.0 |
| hgu95av2.db | 3.13.0 | HH | 3.1-53 |
| hiAnnotator | 1.40.0 | HIBAG | 1.42.0 |
| HiCBricks | 1.24.0 | HiCcompare | 1.28.0 |
| HiCDCPlus | 1.14.0 | HiCDOC | 1.8.0 |
| HiCExperiment | 1.6.0 | HiContacts | 1.8.0 |
| HiCool | 1.6.0 | hicVennDiagram | 1.4.0 |
| HiddenMarkov | 1.8-14 | hierGWAS | 1.36.0 |
| hierinf | 1.24.0 | highcharter | 0.9.4 |
| highr | 0.11 | HilbertCurve | 2.0.0 |
| HilbertVis | 1.64.0 | HilbertVisGUI | 1.64.0 |
| HiLDA | 1.20.0 | hipathia | 3.6.0 |
| HIPPO | 1.18.0 | hiReadsProcessor | 1.42.0 |
| HIREewas | 1.24.0 | HiTC | 1.50.0 |
| HiveR | 0.4.0 | hmdbQuery | 1.26.0 |
| Hmisc | 5.2-3 | HMMcopy | 1.48.0 |
| hms | 1.1.3 | Homo.sapiens | 1.3.1 |
| homologene | 1.4.68.19.3.27 | hoodscanR | 1.4.0 |
| hopach | 2.66.0 | howmany | 0.3-1 |
| HPAanalyze | 1.24.0 | hpar | 1.48.0 |
| HPiP | 1.12.0 | hrbrthemes | 0.8.7 |
| HSMMSingleCell | 1.26.0 | htm2txt | 2.2.2 |
| htmlTable | 2.4.3 | htmltools | 0.5.8.1 |
| HTMLUtils | 0.1.9 | htmlwidgets | 1.6.4 |
| HTqPCR | 1.56.0 | HTSCluster | 2.0.11 |
| HTSeqGenie | 4.32.0 | HTSFilter | 1.46.0 |
| httpcache | 1.2.0 | httpcode | 0.3.0 |
| httpuv | 1.6.15 | httr | 1.4.7 |
| httr2 | 1.1.1 | HubPub | 1.14.1 |
| huge | 1.3.5 | HumanTranscriptomeCompendium | 1.17.0 |
| hummingbird | 1.16.0 | hunspell | 3.0.6 |
| hwriter | 1.3.2.1 | HybridMTest | 1.50.0 |
| hypeR | 2.4.0 | hyperdraw | 1.58.0 |
| hypergraph | 1.78.0 | iASeq | 1.50.0 |
| iasva | 1.24.0 | iBBiG | 1.50.0 |
| ibh | 1.54.0 | iBMQ | 1.46.0 |
| iC10 | 2.0.2 | iC10TrainingData | 2.0.1 |
| ica | 1.0-3 | iCARE | 1.34.0 |
| Icens | 1.78.0 | icetea | 1.24.0 |
| iCheck | 1.36.0 | iChip | 1.60.0 |
| iClusterPlus | 1.42.0 | iCNV | 1.26.0 |
| iCOBRA | 1.34.0 | ICS | 1.4-2 |
| ICSNP | 1.1-2 | ideal | 2.0.0 |
| IdeoViz | 1.42.0 | idiogram | 1.82.0 |
| IDPmisc | 1.1.21 | idpr | 1.16.0 |
| idr | 1.3 | idr2d | 1.20.0 |
| ids | 1.0.1 | IFAA | 1.8.0 |
| iGC | 1.36.0 | IgGeneUsage | 1.20.0 |
| igraph | 2.1.4 | igvR | 1.26.0 |
| IHW | 1.34.0 | Illumina450ProbeVariants.db | 1.42.0 |
| IlluminaHumanMethylation450kanno.ilmn12.hg19 | 0.6.1 | IlluminaHumanMethylation450kmanifest | 0.4.0 |
| IlluminaHumanMethylationEPICanno.ilm10b2.hg19 | 0.6.0 | IlluminaHumanMethylationEPICanno.ilm10b4.hg19 | 0.6.0 |
| IlluminaHumanMethylationEPICmanifest | 0.3.0 | IlluminaHumanMethylationEPICv2anno.20a1.hg38 | 1.0.0 |
| IlluminaHumanMethylationEPICv2manifest | 1.0.0 | illuminaio | 0.48.0 |
| ILoReg | 1.16.0 | imager | 1.0.2 |
| IMAS | 1.30.0 | imcRtools | 1.12.0 |
| IMMAN | 1.26.0 | ImmuneSpaceR | 1.30.0 |
| immunoClust | 1.38.0 | immunotation | 1.14.0 |
| imp4p | 1.2 | IMPCdata | 1.42.0 |
| import | 1.3.2 | impute | 1.80.0 |
| imputeLCMD | 2.1 | inaparc | 1.2.0 |
| INDEED | 2.20.0 | ineq | 0.2-13 |
| iNETgrate | 1.4.0 | iNEXT | 3.0.1 |
| infercnv | 1.22.0 | infinityFlow | 1.16.0 |
| Informeasure | 1.16.0 | infotheo | 1.2.0.1 |
| ini | 0.3.1 | inline | 0.3.21 |
| InPAS | 2.14.1 | INPower | 1.42.0 |
| insight | 1.1.0 | INSPEcT | 1.36.0 |
| instantiate | 0.2.3 | INTACT | 1.6.0 |
| InTAD | 1.26.0 | intansv | 1.46.0 |
| interacCircos | 1.16.0 | InteractionSet | 1.34.0 |
| InteractiveComplexHeatmap | 1.14.0 | interactiveDisplay | 1.44.0 |
| interactiveDisplayBase | 1.44.0 | InterCellar | 2.12.0 |
| IntEREst | 1.30.2 | intergraph | 2.0-4 |
| InterMineR | 1.24.0 | interp | 1.1-6 |
| intervals | 0.15.5 | IntOMICS | 1.2.0 |
| IntramiRExploreR | 1.28.0 | intrinsicDimension | 1.2.0 |
| inum | 1.0-5 | InvariantCausalPrediction | 0.8 |
| invgamma | 1.1 | IONiseR | 2.30.0 |
| iPAC | 1.46.0 | iPath | 1.12.0 |
| ipdDb | 1.24.0 | IPO | 1.32.0 |
| ipred | 0.9-15 | IRanges | 2.40.1 |
| IRdisplay | 1.1 | IRkernel | 1.3.2 |
| irlba | 2.3.5.1 | irr | 0.84.1 |
| isa2 | 0.3.6 | ISAnalytics | 1.16.1 |
| iSEE | 2.18.0 | iSEEde | 1.4.0 |
| iSEEhex | 1.8.0 | iSEEhub | 1.8.0 |
| iSEEindex | 1.4.0 | iSEEpathways | 1.4.0 |
| iSEEu | 1.18.0 | iSeq | 1.58.0 |
| ISLET | 1.8.0 | Iso | 0.0-21 |
| isoband | 0.2.7 | isobar | 1.52.0 |
| IsoBayes | 1.4.0 | ISOcodes | 2024.02.12 |
| IsoCorrectoR | 1.24.0 | IsoCorrectoRGUI | 1.22.0 |
| IsoformSwitchAnalyzeR | 2.6.0 | ISoLDE | 1.34.0 |
| isomiRs | 1.34.0 | isotree | 0.6.1-4 |
| isva | 1.9 | ITALICS | 2.66.0 |
| ITALICSData | 2.44.0 | iterativeBMA | 1.64.0 |
| iterativeBMAsurv | 1.64.0 | iterators | 1.0.14 |
| iterClust | 1.24.0 | itertools | 0.1-3 |
| IVAS | 2.26.0 | ivygapSE | 1.28.0 |
| IWTomics | 1.30.0 | JADE | 2.0-4 |
| janeaustenr | 1.0.0 | janitor | 2.2.1 |
| JASPAR2016 | 1.34.0 | JASPAR2018 | 1.1.1 |
| JASPAR2024 | 0.99.6 | jomo | 2.7-6 |
| jpeg | 0.1-11 | jquerylib | 0.1.4 |
| jsonlite | 1.9.1 | jsonvalidate | 1.5.0 |
| kableExtra | 1.4.0 | karyoploteR | 1.32.0 |
| katdetectr | 1.8.0 | KBoost | 1.14.0 |
| KCsmart | 2.64.0 | kde1d | 1.1.0 |
| kebabs | 1.40.0 | KEGGandMetacoreDzPathwaysGEO | 1.26.0 |
| KEGGdzPathwaysGEO | 1.44.0 | KEGGgraph | 1.66.0 |
| KEGGlincs | 1.32.0 | keggorthology | 2.58.0 |
| KEGGREST | 1.46.0 | Kendall | 2.2.1 |
| keras | 2.15.0 | KernelKnn | 1.1.5 |
| kernlab | 0.9-33 | kinship2 | 1.9.6.1 |
| KinSwingR | 1.24.0 | kissDE | 1.26.0 |
| kknn | 1.3.1 | klaR | 1.7-3 |
| km.ci | 0.5-6 | kmer | 1.1.2 |
| KMsurv | 0.1-5 | knitr | 1.50 |
| knitrBootstrap | 1.0.3 | knn.covertree | 1.0 |
| knnmi | 1.0 | KnowSeq | 1.20.0 |
| KOdata | 1.32.0 | kohonen | 3.0.12 |
| koRpus | 0.13-8 | koRpus.lang.en | 0.1-4 |
| kpeaks | 1.1.0 | kpmt | 0.1.0 |
| kriging | 1.2 | ks | 1.14.3 |
| kSamples | 1.2-10 | labeling | 0.4.3 |
| labelled | 2.14.0 | LACE | 2.10.0 |
| laeken | 0.5.3 | lambda.r | 1.2.4 |
| LambertW | 0.6.9-1 | lamW | 2.2.4 |
| LaplacesDemon | 16.1.6 | lapmix | 1.72.0 |
| lars | 1.3 | later | 1.4.1 |
| latex2exp | 0.9.6 | latticeExtra | 0.6-30 |
| lava | 1.8.1 | lavaan | 0.6-19 |
| lazyeval | 0.2.2 | LBE | 1.74.0 |
| lbfgs | 1.2.1.2 | ldblock | 1.36.0 |
| LEA | 3.18.0 | leaps | 3.2 |
| LearnBayes | 2.15.1 | learnr | 0.11.5 |
| LedPred | 1.40.0 | lefser | 1.16.2 |
| leiden | 0.4.3.1 | leidenbase | 0.1.32 |
| lemur | 1.4.0 | les | 1.56.0 |
| levi | 1.24.0 | lexicon | 1.2.1 |
| lfa | 2.6.0 | lfda | 1.1.3 |
| lgr | 0.4.4 | lhs | 1.2.0 |
| libcoin | 1.0-10 | LiblineaR | 2.10-24 |
| lifecycle | 1.0.4 | liger | 2.0.1 |
| LIM | 1.4.7.1 | limma | 3.62.2 |
| limmaGUI | 1.82.0 | limSolve | 1.5.7.1 |
| LineagePulse | 1.21.0 | lineagespot | 1.10.0 |
| linkcomm | 1.0-14 | LinkHD | 1.20.0 |
| Linnorm | 2.30.0 | linprog | 0.9-4 |
| LinTInd | 1.10.0 | lintr | 3.2.0 |
| lionessR | 1.20.0 | lipidr | 2.20.0 |
| LiquidAssociation | 1.60.0 | lisaClust | 1.14.4 |
| listenv | 0.9.1 | listviewer | 4.0.0 |
| lmdme | 1.48.0 | lme4 | 1.1-36 |
| lmerTest | 3.1-3 | lmodel2 | 1.7-4 |
| lmom | 3.2 | Lmoments | 1.3-1 |
| lmtest | 0.9-40 | LOBSTAHS | 1.32.0 |
| lobstr | 1.1.2 | locfdr | 1.1-8 |
| locfit | 1.5-9.12 | loci2path | 1.26.0 |
| log4r | 0.4.4 | logger | 0.4.0 |
| logging | 0.10-108 | logicFS | 2.26.0 |
| LogicReg | 1.6.6 | logistf | 1.26.0 |
| logitnorm | 0.8.39 | logNormReg | 0.5-0 |
| logr | 1.3.8 | logspline | 2.1.22 |
| lokern | 1.1-12 | LOLA | 1.36.0 |
| longitudinal | 1.1.13 | loo | 2.8.0 |
| LoomExperiment | 1.24.0 | LPE | 1.80.0 |
| LPEadj | 1.62.0 | lpNet | 2.38.0 |
| lpSolve | 5.6.23 | lpSolveAPI | 5.5.2.0-17.12 |
| lpsymphony | 1.34.0 | LRBaseDbi | 2.16.0 |
| LRcell | 1.14.0 | lsa | 0.73.3 |
| LSD | 4.1-0 | lsr | 0.5.2 |
| lubridate | 1.9.4 | lumi | 2.58.0 |
| lumiHumanAll.db | 1.22.0 | LungCancerACvsSCCGEO | 1.42.0 |
| lwgeom | 0.2-14 | LymphoSeq | 1.34.0 |
| LymphoSeqDB | 0.99.2 | M3C | 1.28.0 |
| M3Drop | 1.32.0 | m6Aboost | 1.12.0 |
| Maaslin2 | 1.20.0 | Macarron | 1.10.0 |
| macat | 1.76.0 | maCorrPlot | 1.76.0 |
| MACSQuantifyR | 1.20.0 | MACSr | 1.14.0 |
| made4 | 1.80.0 | MADSEQ | 1.32.0 |
| MafDb.1Kgenomes.phase3.hs37d5 | 3.10.0 | MafDb.ExAC.r1.0.hs37d5 | 3.10.0 |
| MafDb.gnomADex.r2.1.hs37d5 | 3.10.0 | maftools | 2.22.0 |
| MAGAR | 1.14.0 | MAGeCKFlute | 2.9.0 |
| magic | 1.6-1 | magicaxis | 2.4.5 |
| magick | 2.8.5 | magpie | 1.6.0 |
| magrene | 1.8.0 | magrittr | 2.0.3 |
| MAI | 1.12.0 | MAIT | 1.40.0 |
| makecdfenv | 1.82.0 | MALDIquant | 1.22.3 |
| MANOR | 1.78.0 | MantelCorr | 1.76.0 |
| mapplots | 1.5.2 | mapproj | 1.2.11 |
| maPredictDSC | 1.44.0 | maps | 3.4.2.1 |
| mapscape | 1.30.0 | maptree | 1.4-8 |
| mariner | 1.6.0 | markdown | 1.13 |
| marr | 1.16.0 | marray | 1.84.0 |
| martini | 1.26.0 | maser | 1.24.0 |
| mashr | 0.2.79 | maSigPro | 1.78.0 |
| maskBAD | 1.50.0 | MassArray | 1.58.0 |
| massiR | 1.42.0 | MassSpecWavelet | 1.72.1 |
| MAST | 1.32.0 | mastR | 1.6.0 |
| matchBox | 1.48.0 | matchingR | 1.3.3 |
| mathjaxr | 1.6-0 | matlab | 1.0.4.1 |
| matrixcalc | 1.0-6 | MatrixEQTL | 2.3 |
| MatrixExtra | 0.1.15 | MatrixGenerics | 1.18.1 |
| MatrixModels | 0.5-3 | MatrixQCvis | 1.14.0 |
| MatrixRider | 1.38.0 | matrixStats | 1.5.0 |
| matrixTests | 0.2.3 | matter | 2.8.0 |
| maxLik | 1.5-2.1 | maxstat | 0.7-25 |
| MBA | 0.1-2 | MBAmethyl | 1.40.0 |
| MBASED | 1.40.0 | MBCB | 1.60.0 |
| MBECS | 1.10.0 | mbest | 0.6 |
| mbkmeans | 1.22.0 | mboost | 2.9-11 |
| mBPCR | 1.60.0 | MBQN | 2.18.0 |
| mbQTL | 1.6.0 | MBttest | 1.34.0 |
| MCbiclust | 1.30.0 | mcbiopi | 1.1.6 |
| MCL | 1.0 | mclust | 6.1.1 |
| mclustcomp | 0.3.3 | mcmc | 0.9-8 |
| MCMCglmm | 2.36 | MCMCpack | 1.7-1 |
| MCMCprecision | 0.4.0 | mco | 1.17 |
| mcr | 1.3.3.1 | mCSEA | 1.26.2 |
| mCSEAdata | 1.26.1 | mdp | 1.26.0 |
| mdqc | 1.68.0 | MDTS | 1.26.0 |
| MEAL | 1.36.0 | MeasurementError.cor | 1.78.0 |
| MEAT | 1.18.0 | MEB | 1.20.0 |
| mediation | 4.5.0 | MEDIPS | 1.58.0 |
| MEDME | 1.66.0 | mefa | 3.2-9 |
| megadepth | 1.16.0 | MEIGOR | 1.40.0 |
| Melissa | 1.22.0 | memes | 1.14.0 |
| memoise | 2.0.1 | memuse | 4.2-3 |
| Mergeomics | 1.34.0 | MeSHDbi | 1.42.0 |
| meshes | 1.32.0 | meshr | 2.12.0 |
| MesKit | 1.16.0 | MESS | 0.5.12 |
| messina | 1.42.0 | metabCombiner | 1.16.0 |
| metabinR | 1.8.0 | MetaboAnnotation | 1.10.1 |
| MetaboCoreUtils | 1.14.0 | metaboliteIDmapping | 1.0.0 |
| metabolomicsWorkbenchR | 1.16.0 | metabomxtr | 1.40.0 |
| MetaboSignal | 1.36.0 | metaCCA | 1.34.0 |
| MetaCycle | 1.2.0 | MetaCyto | 1.28.0 |
| metadat | 1.4-0 | metafor | 4.8-0 |
| metagene2 | 1.22.0 | metagenomeSeq | 1.48.1 |
| metahdep | 1.64.0 | metaMA | 3.1.3 |
| metaMS | 1.42.0 | MetaNeighbor | 1.26.0 |
| metap | 1.12 | MetaPhOR | 1.8.0 |
| metapod | 1.14.0 | metapone | 1.12.0 |
| metaSeq | 1.46.0 | metaseqR2 | 1.18.0 |
| MetBrewer | 0.2.0 | MetCirc | 1.36.0 |
| methimpute | 1.28.0 | methInheritSim | 1.28.0 |
| MethPed | 1.34.0 | MethReg | 1.16.0 |
| methrix | 1.20.0 | MethTargetedNGS | 1.38.0 |
| MethylAid | 1.40.0 | methylCC | 1.20.0 |
| methylclock | 1.12.0 | methylclockData | 1.14.0 |
| methylGSA | 1.24.0 | methylInheritance | 1.30.0 |
| methylKit | 1.32.1 | MethylMix | 2.36.0 |
| methylMnM | 1.44.0 | methylPipe | 1.40.0 |
| methylscaper | 1.14.0 | MethylSeekR | 1.46.0 |
| methylSig | 1.18.0 | methylumi | 2.52.0 |
| MetID | 1.24.0 | MetNet | 1.24.0 |
| metR | 0.18.0 | mfa | 1.28.0 |
| Mfuzz | 2.66.0 | MGFM | 1.40.0 |
| MGFR | 1.32.0 | MGLM | 0.2.1 |
| mgsa | 1.54.0 | mgsub | 1.7.3 |
| mhsmm | 0.4.21 | mia | 1.14.0 |
| miaSim | 1.12.0 | miaViz | 1.14.0 |
| mice | 3.17.0 | MiChip | 1.60.0 |
| microbenchmark | 1.5.0 | microbiome | 1.28.0 |
| microbiomeDASim | 1.20.0 | microbiomeExplorer | 1.16.0 |
| microbiomeMarker | 1.12.2 | MicrobiomeProfiler | 1.12.0 |
| MicrobiomeStat | 1.2 | MicrobiotaProcess | 1.18.0 |
| microRNA | 1.64.0 | microSTASIS | 1.6.0 |
| MICSQTL | 1.4.0 | midasHLA | 1.14.0 |
| miloR | 2.2.0 | mimager | 1.30.0 |
| mime | 0.13 | mina | 1.14.0 |
| MineICA | 1.46.0 | minet | 3.64.0 |
| minfi | 1.52.1 | MinimumDistance | 1.50.0 |
| miniUI | 0.1.1.1 | minpack.lm | 1.2-4 |
| minqa | 1.2.8 | MiPP | 1.78.0 |
| miQC | 1.14.0 | MIRA | 1.28.0 |
| MiRaGE | 1.48.0 | mirbase.db | 1.2.0 |
| miRBaseVersions.db | 1.1.0 | miRcomp | 1.36.0 |
| miRcompData | 1.36.0 | mirIntegrator | 1.36.0 |
| miRLAB | 1.36.0 | miRNAmeConverter | 1.34.0 |
| miRNApath | 1.66.0 | miRNAtap | 1.40.0 |
| miRNAtap.db | 0.99.10 | mirTarRnaSeq | 1.14.0 |
| misc3d | 0.9-1 | miscTools | 0.6-28 |
| missForest | 1.5 | missMDA | 1.19 |
| missMethyl | 1.40.3 | missRows | 1.26.0 |
| mistyR | 1.14.0 | mitch | 1.18.4 |
| mitml | 0.4-5 | mitoClone2 | 1.12.0 |
| mitools | 2.4 | mixOmics | 6.30.0 |
| mixsmsn | 1.1-10 | mixsqp | 0.3-54 |
| mixtools | 2.0.0.1 | MKmisc | 1.9 |
| mlapi | 0.1.1 | mlbench | 2.1-6 |
| MLInterfaces | 1.86.0 | MLmetrics | 1.1.3 |
| MLP | 1.54.0 | mlr3 | 0.23.0 |
| mlr3learners | 0.10.0 | mlr3measures | 1.0.0 |
| mlr3misc | 0.16.0 | mlr3tuning | 1.3.0 |
| MLSeq | 2.24.0 | mltools | 0.3.5 |
| mmand | 1.6.3 | MMDiff2 | 1.34.0 |
| MMUPHin | 1.20.0 | mnem | 1.22.0 |
| mnormt | 2.1.1 | moanin | 1.14.0 |
| MobilityTransformR | 1.6.0 | mockery | 0.4.4 |
| MODA | 1.32.0 | ModCon | 1.14.0 |
| modeest | 2.4.0 | ModelMetrics | 1.2.2.2 |
| modelr | 0.1.11 | modeltools | 0.2-23 |
| Modstrings | 1.22.0 | MOFA2 | 1.16.0 |
| MOFAdata | 1.22.0 | MOGAMUN | 1.16.0 |
| mogsa | 1.40.0 | MoleculeExperiment | 1.6.0 |
| MOMA | 1.18.0 | moments | 0.14.1 |
| monaLisa | 1.12.0 | monocle | 2.34.0 |
| Moonlight2R | 1.4.0 | MoonlightR | 1.32.0 |
| mosaicCore | 0.9.4.0 | mosaics | 2.44.0 |
| mosbi | 1.12.0 | mosdef | 1.2.0 |
| MOSim | 2.2.0 | Motif2Site | 1.10.0 |
| motifbreakR | 2.20.0 | motifcounter | 1.30.0 |
| MotifDb | 1.48.0 | motifmatchr | 1.28.0 |
| motifStack | 1.50.0 | MouseFM | 1.16.0 |
| MPFE | 1.42.0 | mpm | 1.0-23 |
| mpra | 1.28.0 | MPRAnalyze | 1.24.0 |
| MQmetrics | 1.10.0 | mrfDepth | 1.0.17 |
| mRMRe | 2.1.2.2 | msa | 1.38.0 |
| MSA2dist | 1.10.1 | MsBackendMassbank | 1.14.0 |
| MsBackendMgf | 1.14.0 | MsBackendMsp | 1.10.0 |
| MsBackendRawFileReader | 1.12.0 | MsBackendSql | 1.6.0 |
| MsCoreUtils | 1.18.0 | msdata | 0.46.0 |
| MsDataHub | 1.6.0 | MsExperiment | 1.8.0 |
| MsFeatures | 1.14.0 | msgbsR | 1.30.0 |
| msgps | 1.3.5 | msigdb | 1.14.0 |
| msigdbdf | 24.1.0 | msigdbr | 10.0.1 |
| msImpute | 1.16.0 | mslp | 1.8.0 |
| msm | 1.8.2 | msmsEDA | 1.44.0 |
| msmsTests | 1.44.0 | MSnbase | 2.32.0 |
| MSnID | 1.40.0 | MSPrep | 1.16.0 |
| msPurity | 1.32.0 | MSQC | 1.1.0 |
| msqrob2 | 1.14.1 | MsQuality | 1.6.2 |
| MSstats | 4.14.2 | MSstatsBig | 1.4.0 |
| MSstatsConvert | 1.16.1 | MSstatsLiP | 1.12.0 |
| MSstatsLOBD | 1.14.0 | MSstatsPTM | 2.8.1 |
| MSstatsQC | 2.24.0 | MSstatsQCgui | 1.26.0 |
| MSstatsShiny | 1.8.0 | MSstatsTMT | 2.14.2 |
| MuData | 1.10.0 | Mulcom | 1.56.0 |
| multcomp | 1.4-28 | multcompView | 0.1-10 |
| MultiAssayExperiment | 1.32.0 | MultiBaC | 1.16.0 |
| multiClust | 1.36.0 | multicool | 1.0.1 |
| MultiDataSet | 1.34.0 | multiGSEA | 1.16.2 |
| multiHiCcompare | 1.24.0 | MultiMed | 2.28.0 |
| multiMiR | 1.28.0 | MultimodalExperiment | 1.6.0 |
| MultiRNAflow | 1.4.0 | multiscan | 1.66.0 |
| multitaper | 1.0-17 | multiWGCNA | 1.4.0 |
| multtest | 2.62.0 | mumosa | 1.14.0 |
| MungeSumstats | 1.14.1 | munsell | 0.5.1 |
| Mus.musculus | 1.3.1 | muscat | 1.20.0 |
| muscle | 3.48.0 | musicatk | 2.0.0 |
| MutationalPatterns | 3.16.0 | mutoss | 0.1-13 |
| MVCClass | 1.80.0 | mvnfast | 0.2.8 |
| mvoutlier | 2.1.1 | mvtnorm | 1.3-3 |
| MWASTools | 1.30.0 | mwcsr | 0.1.9 |
| mygene | 1.42.0 | myvariant | 1.36.0 |
| mzID | 1.44.0 | mzR | 2.40.0 |
| nabor | 0.5.0 | NADA | 1.6-1.1 |
| NADfinder | 1.30.0 | naivebayes | 1.0.0 |
| naniar | 1.1.0 | nanoarrow | 0.6.0 |
| NanoMethViz | 3.2.0 | NanoStringDiff | 1.36.0 |
| NanoStringNCTools | 1.14.0 | nanotatoR | 1.18.0 |
| nanotime | 0.3.11 | NanoTube | 1.12.0 |
| naturalsort | 0.1.3 | NBAMSeq | 1.22.0 |
| NbClust | 3.0.1 | NBPSeq | 0.3.1 |
| ncdf4 | 1.23 | ncdfFlow | 2.52.1 |
| ncGTW | 1.20.0 | NCIgraph | 1.54.0 |
| NCmisc | 1.2.0 | ncRNAtools | 1.16.0 |
| ndexr | 1.28.0 | nearBynding | 1.16.0 |
| Nebulosa | 1.16.0 | nempi | 1.14.0 |
| neo4r | 0.1.1 | NetActivity | 1.8.0 |
| NetActivityData | 1.8.0 | netbiov | 1.36.0 |
| netboost | 2.14.0 | netDx | 1.14.0 |
| nethet | 1.38.0 | netOmics | 1.8.0 |
| NetPathMiner | 1.42.0 | netprioR | 1.32.0 |
| NetRep | 1.2.7 | netresponse | 1.66.0 |
| NetSAM | 1.46.0 | netSmooth | 1.26.0 |
| network | 1.19.0 | networkD3 | 0.4 |
| netZooR | 1.10.0 | NeuCA | 1.8.1 |
| NewWave | 1.16.0 | NGLVieweR | 1.4.0 |
| ngsReports | 2.8.0 | NHPoisson | 3.3 |
| nipals | 1.0 | nipalsMCIA | 1.4.4 |
| NISTunits | 1.0.1 | nleqslv | 3.3.5 |
| nloptr | 2.2.1 | NLP | 0.3-2 |
| nls2 | 0.3-4 | NMF | 0.28 |
| NMI | 2.0 | nnlasso | 0.3 |
| nnls | 1.6 | nnNorm | 2.70.0 |
| nnSVG | 1.10.3 | nnTensor | 1.3.0 |
| NOISeq | 2.50.0 | nondetects | 2.32.0 |
| nor1mix | 1.3-3 | NoRCE | 1.18.0 |
| norm | 1.0-11.1 | normalize450K | 1.34.0 |
| NormalyzerDE | 1.24.0 | NormqPCR | 1.52.0 |
| normr | 1.32.0 | nortest | 1.0-4 |
| Nozzle.R1 | 1.1-1.1 | np | 0.60-18 |
| NPARC | 1.18.0 | npGSEA | 1.42.0 |
| nsga2R | 1.1 | NTW | 1.56.0 |
| nucleoSim | 1.34.0 | nucleR | 2.38.0 |
| nuCpos | 1.24.0 | nullranges | 1.12.0 |
| numbers | 0.8-5 | numDeriv | 2016.8-1.1 |
| NuPoP | 2.14.0 | NxtIRFdata | 1.12.0 |
| oaqc | 2.0.0 | objectProperties | 0.6.8 |
| objectSignals | 0.10.3 | occugene | 1.66.0 |
| OCplus | 1.80.0 | octad | 1.8.0 |
| octad.db | 1.8.0 | odseq | 1.34.0 |
| officer | 0.6.7 | OGRE | 1.10.0 |
| oligo | 1.70.1 | oligoClasses | 1.68.0 |
| OLIN | 1.84.0 | OLINgui | 1.80.0 |
| omada | 1.8.0 | OmaDB | 2.22.0 |
| omicade4 | 1.46.0 | OmicCircos | 1.44.0 |
| omicplotR | 1.26.0 | omicRexposome | 1.28.0 |
| OMICsPCA | 1.24.0 | OMICsPCAdata | 1.24.0 |
| omicsPrint | 1.26.0 | omicsViewer | 1.10.0 |
| Omixer | 1.16.0 | OmnipathR | 3.14.0 |
| ompBAM | 1.10.0 | oncomix | 1.28.0 |
| oncoscanR | 1.8.0 | OncoScore | 1.34.0 |
| OncoSimulR | 4.8.0 | onlineFDR | 2.14.0 |
| ontologyIndex | 2.12 | ontologyPlot | 1.7 |
| ontoProc | 2.0.0 | openair | 2.18-2 |
| opencpu | 2.2.14 | openCyto | 2.18.0 |
| openPrimeR | 1.28.0 | openPrimeRui | 1.24.0 |
| openssl | 2.3.2 | OpenStats | 1.18.0 |
| openxlsx | 4.2.8 | operator.tools | 1.6.3 |
| oposSOM | 2.24.0 | oppar | 1.34.0 |
| oppti | 1.20.0 | optimalFlow | 1.18.0 |
| optimalFlowData | 1.18.0 | optimx | 2024-12.2 |
| optparse | 1.7.5 | OPWeight | 1.28.0 |
| OrderedList | 1.78.0 | ordinal | 2023.12-4.1 |
| ore | 1.7.5.1 | ORFhunteR | 1.14.0 |
| ORFik | 1.26.2 | org.Bt.eg.db | 3.20.0 |
| org.Ce.eg.db | 3.20.0 | org.Dm.eg.db | 3.20.0 |
| org.Dr.eg.db | 3.20.0 | org.Hs.eg.db | 3.20.0 |
| org.Mm.eg.db | 3.20.0 | org.Rn.eg.db | 3.20.0 |
| org.Sc.sgd.db | 3.20.0 | Organism.dplyr | 1.34.0 |
| OrganismDbi | 1.48.0 | OrgMassSpecR | 0.5-3 |
| origami | 1.0.7 | orthogene | 1.12.0 |
| orthos | 1.4.0 | orthosData | 1.4.0 |
| OSAT | 1.54.0 | Oscope | 1.36.0 |
| osfr | 0.2.9 | osqp | 0.6.3.3 |
| OTUbase | 1.56.0 | outliers | 0.15 |
| OUTRIDER | 1.24.0 | OutSplice | 1.6.0 |
| OVESEG | 1.22.0 | PAA | 1.40.0 |
| packFinder | 1.18.0 | padma | 1.16.0 |
| PADOG | 1.48.0 | pageRank | 1.16.0 |
| paintmap | 1.0 | PAIRADISE | 1.22.0 |
| paircompviz | 1.44.0 | PairedData | 1.1.1 |
| pairedGSEA | 1.6.0 | pairkat | 1.12.0 |
| pairsD3 | 0.1.3 | paletteer | 1.6.0 |
| palmerpenguins | 0.1.1 | pals | 1.10 |
| pamr | 1.57 | pan | 1.9 |
| pandaR | 1.38.0 | pander | 0.6.6 |
| panelcn.mops | 1.28.0 | PanomiR | 1.10.0 |
| panp | 1.76.0 | PANR | 1.52.0 |
| PanViz | 1.4.0 | paradox | 1.0.1 |
| parallelDist | 0.2.6 | ParallelLogger | 3.3.1 |
| parallelly | 1.42.0 | pareg | 1.6.0 |
| parglms | 1.38.0 | parmigene | 1.1.1 |
| parody | 1.64.0 | partCNV | 1.4.0 |
| partykit | 1.2-23 | pasilla | 1.34.0 |
| PAST | 1.22.0 | pastecs | 1.4.2 |
| patchwork | 1.3.0 | Path2PPI | 1.36.0 |
| pathifier | 1.44.0 | PathNet | 1.46.0 |
| PathoStat | 1.32.0 | pathRender | 1.74.0 |
| pathview | 1.46.0 | pathwayPCA | 1.22.0 |
| paws.common | 0.8.2 | paws.storage | 0.9.0 |
| paxtoolsr | 1.36.0 | pbapply | 1.7-2 |
| pbdZMQ | 0.3-13 | pbivnorm | 0.6.0 |
| pbkrtest | 0.5.3 | pbmcapply | 1.5.1 |
| pcaExplorer | 3.0.0 | pcalg | 2.7-12 |
| pcaMethods | 1.98.0 | PCAN | 1.34.0 |
| pcaPP | 2.0-5 | PCAtools | 2.18.0 |
| pcxn | 2.24.0 | pcxnData | 2.24.0 |
| pd.mapping50k.xba240 | 3.12.0 | PDATK | 1.10.0 |
| pdfCluster | 1.0-4 | pdftools | 3.5.0 |
| pdInfoBuilder | 1.70.0 | pdist | 1.2.1 |
| PeacoQC | 1.16.0 | peakPantheR | 1.20.0 |
| PECA | 1.42.0 | peco | 1.18.0 |
| penalized | 0.9-52 | pengls | 1.12.0 |
| PepsNMR | 1.24.0 | pepStat | 1.40.0 |
| Peptides | 2.4.6 | pepXMLTab | 1.40.0 |
| PerformanceAnalytics | 2.0.8 | periodicDNA | 1.16.0 |
| permute | 0.9-7 | PFAM.db | 3.20.0 |
| pfamAnalyzeR | 1.6.0 | pgca | 1.30.0 |
| phangorn | 2.12.1 | phantasus | 1.26.0 |
| phantasusLite | 1.4.0 | PharmacoGx | 3.10.1 |
| phastCons100way.UCSC.hg19 | 3.7.2 | phastCons100way.UCSC.hg38 | 3.7.1 |
| phateR | 1.0.7 | pheatmap | 1.0.12 |
| phemd | 1.18.0 | PhenoGeneRanker | 1.14.0 |
| phenomis | 1.8.0 | phenopath | 1.30.0 |
| phenoTest | 1.54.0 | PhenStat | 2.42.0 |
| philentropy | 0.9.0 | philr | 1.32.0 |
| PhIPData | 1.14.0 | phosphonormalizer | 1.30.0 |
| phosphoricons | 0.2.1 | PhosR | 1.16.0 |
| phyclust | 0.1-34 | phylobase | 0.8.12 |
| phylogram | 2.1.0 | phylolm | 2.6.5 |
| PhyloProfile | 1.20.4 | phyloseq | 1.50.0 |
| Pi | 2.14.0 | piano | 2.22.0 |
| pickgene | 1.78.0 | PICS | 2.50.0 |
| Pigengene | 1.32.0 | pillar | 1.10.1 |
| pinfsc50 | 1.3.0 | PING | 2.50.0 |
| pingr | 2.0.5 | pipeComp | 1.16.0 |
| pipeFrame | 1.22.0 | pixmap | 0.4-13 |
| pkgbuild | 1.4.6 | pkgconfig | 2.0.3 |
| pkgdown | 2.1.1 | pkgload | 1.4.0 |
| planet | 1.14.0 | planttfhunter | 1.6.0 |
| plasmut | 1.4.0 | plgem | 1.78.0 |
| plier | 1.76.0 | PloGO2 | 1.14.0 |
| plogr | 0.2.0 | plot3D | 1.4.1 |
| plot3Drgl | 1.0.4 | plotgardener | 1.12.0 |
| plotGrouper | 1.24.0 | plotly | 4.10.4 |
| plotmo | 3.6.4 | plotrix | 3.8-4 |
| plotROC | 2.3.1 | PLPE | 1.66.0 |
| pls | 2.8-5 | plsgenomics | 1.5-3 |
| plsVarSel | 0.9.12 | plyinteractions | 1.4.0 |
| plyr | 1.8.9 | plyranges | 1.26.0 |
| PMA | 1.2-4 | PMCMRplus | 1.9.12 |
| pmm | 1.38.0 | pmp | 1.18.0 |
| png | 0.1-8 | PoDCall | 1.14.0 |
| podkat | 1.38.0 | pogos | 1.26.0 |
| poibin | 1.6 | PoiClaClu | 1.0.2.1 |
| polspline | 1.1.25 | Polychrome | 1.5.1 |
| polyclip | 1.10-7 | polyester | 1.38.0 |
| polylabelr | 0.3.0 | polynom | 1.4-1 |
| PolynomF | 2.0-8 | PolyPhen.Hsapiens.dbSNP131 | 1.0.2 |
| POMA | 1.16.0 | poorman | 0.2.7 |
| posterior | 1.6.1 | poweRlaw | 1.0.0 |
| powerTCR | 1.26.0 | POWSC | 1.14.0 |
| ppclust | 1.1.0.1 | ppcor | 1.1 |
| ppcseq | 1.14.0 | PPInfer | 1.32.0 |
| pqsfinder | 2.22.0 | prabclus | 2.3-4 |
| pracma | 2.4.4 | praise | 1.0.0 |
| pram | 1.22.0 | praznik | 11.0.0 |
| prebs | 1.46.0 | preciseTAD | 1.16.0 |
| precrec | 0.14.4 | PREDA | 1.52.0 |
| preprocessCore | 1.68.0 | preseqR | 4.0.0 |
| prettydoc | 0.4.1 | prettyunits | 1.2.0 |
| primirTSS | 1.24.0 | PRIMME | 3.2-6 |
| PrInCE | 1.22.0 | princurve | 2.1.6 |
| prismatic | 1.1.2 | proActiv | 1.16.0 |
| proBAMr | 1.40.0 | pROC | 1.18.5 |
| PROcess | 1.82.0 | processx | 3.8.6 |
| procoil | 2.34.0 | proDA | 1.20.0 |
| prodlim | 2024.06.25 | profileModel | 0.6.1 |
| profileplyr | 1.22.0 | profileScoreDist | 1.34.0 |
| profmem | 0.6.0 | profvis | 0.4.0 |
| progeny | 1.28.0 | progress | 1.2.3 |
| progressr | 0.15.1 | proj4 | 1.0-15 |
| projectR | 1.22.0 | pRoloc | 1.46.1 |
| pRolocdata | 1.44.1 | pRolocGUI | 2.16.0 |
| PROMISE | 1.58.0 | promises | 1.3.2 |
| PROPER | 1.38.0 | PROPS | 1.28.0 |
| Prostar | 1.38.1 | proteinProfiles | 1.46.0 |
| ProteoDisco | 1.12.0 | ProteoMM | 1.24.0 |
| protGear | 1.10.0 | ProtGenerics | 1.38.0 |
| proto | 1.0.0 | protolite | 2.3.1 |
| protr | 1.7-4 | protViz | 0.7.9 |
| proxy | 0.4-27 | proxyC | 0.4.1 |
| PRROC | 1.4 | pryr | 0.1.6 |
| ps | 1.9.0 | PSCBS | 0.67.0 |
| pscl | 1.5.9 | PSEA | 1.36.0 |
| psichomics | 1.32.0 | PSMatch | 1.10.0 |
| pspline | 1.0-21 | psych | 2.5.3 |
| psygenet2r | 1.34.1 | ptairMS | 1.14.0 |
| ptw | 1.9-16 | puma | 3.48.0 |
| PureCN | 2.12.0 | purrr | 1.0.4 |
| pvac | 1.54.0 | pvca | 1.46.0 |
| pvclust | 2.2-0 | Pviz | 1.40.0 |
| pwalign | 1.2.0 | PWMEnrich | 4.42.0 |
| pwOmics | 1.34.0 | pwr | 1.3-0 |
| qap | 0.1-2 | qckitfastq | 1.22.0 |
| qcmetrics | 1.44.0 | qdapRegex | 0.7.8 |
| qdapTools | 1.3.7 | QDNAseq | 1.42.0 |
| QFeatures | 1.16.0 | qgraph | 1.9.8 |
| qlcMatrix | 0.9.8 | qmtools | 1.10.0 |
| qpcR | 1.4-1 | qpcrNorm | 1.64.0 |
| qpdf | 1.3.5 | qpgraph | 2.40.0 |
| qPLEXanalyzer | 1.24.0 | qqconf | 1.3.2 |
| qqman | 0.1.9 | qs | 0.27.3 |
| qsea | 1.32.0 | qsmooth | 1.22.0 |
| QSutils | 1.24.0 | qsvaR | 1.10.0 |
| qtl | 1.70 | QTLExperiment | 1.4.0 |
| Qtlizer | 1.20.1 | quadprog | 1.5-8 |
| qualV | 0.3-5 | quanteda | 4.2.0 |
| quantiseqr | 1.14.0 | quantmod | 0.4.26 |
| quantreg | 6.1 | quantro | 1.40.0 |
| quantsmooth | 1.72.0 | quarto | 1.4.4 |
| QuartPAC | 1.34.0 | QuasR | 1.46.0 |
| QuaternaryProd | 1.40.0 | QUBIC | 1.34.0 |
| questionr | 0.8.0 | QuickJSR | 1.6.0 |
| qusage | 2.40.0 | qvalue | 2.38.0 |
| qvcalc | 1.0.4 | R.cache | 0.16.0 |
| R.devices | 2.17.2 | R.filesets | 2.15.1 |
| R.huge | 0.10.1 | R.matlab | 3.7.0 |
| R.methodsS3 | 1.8.2 | R.oo | 1.27.0 |
| R.rsp | 0.46.0 | R.utils | 2.13.0 |
| R2HTML | 2.3.4 | R2jags | 0.8-9 |
| R2WinBUGS | 2.1-22.1 | R3CPET | 1.38.0 |
| r3Cseq | 1.52.0 | R453Plus1Toolbox | 1.56.0 |
| R4RNA | 1.34.0 | R6 | 2.6.1 |
| R6P | 0.4.0 | radiant.data | 1.6.7 |
| RadioGx | 2.10.0 | raer | 1.4.0 |
| rafalib | 1.0.0 | ragg | 1.3.3 |
| RaggedExperiment | 1.30.0 | RAIDS | 1.4.0 |
| rain | 1.40.0 | rainbow | 3.8 |
| ramr | 1.14.0 | ramwas | 1.30.0 |
| randomcoloR | 1.1.0.1 | randomForest | 4.7-1.2 |
| randomizr | 1.0.0 | RandomWalkRestartMH | 1.22.0 |
| randPack | 1.52.0 | randRotation | 1.18.0 |
| randtests | 1.0.2 | randtoolbox | 2.0.5 |
| ranger | 0.17.0 | RankAggreg | 0.6.6 |
| RankProd | 3.32.0 | RANN | 2.6.2 |
| rapiclient | 0.1.8 | rapidjsonr | 1.2.0 |
| RApiSerialize | 0.1.4 | rappdirs | 0.3.3 |
| rapportools | 1.2 | RAREsim | 1.10.0 |
| RareVariantVis | 2.34.0 | rARPACK | 0.11-0 |
| Rarr | 1.6.0 | raster | 3.6-31 |
| rawrr | 1.14.0 | RbcBook1 | 1.74.0 |
| Rbec | 1.14.0 | rBeta2009 | 1.0.1 |
| RBGL | 1.82.0 | rbibutils | 2.3 |
| RBioFormats | 1.6.0 | RBioinf | 1.66.0 |
| rbiom | 2.1.2 | rBiopaxParser | 2.46.0 |
| RBM | 1.38.0 | rbokeh | 0.5.1 |
| Rbowtie | 1.46.0 | Rbowtie2 | 2.12.3 |
| rbsurv | 2.64.0 | Rbwa | 1.10.0 |
| RCAS | 1.32.0 | RCASPAR | 1.52.0 |
| rcdk | 3.8.1 | rcdklibs | 2.9 |
| rcellminer | 2.28.0 | rcellminerData | 2.28.0 |
| rCGH | 1.36.0 | RCircos | 1.2.2 |
| rclipboard | 0.2.1 | RCM | 1.22.0 |
| rcmdcheck | 1.4.0 | Rcollectl | 1.6.0 |
| RColorBrewer | 1.1-3 | Rcpi | 1.42.0 |
| Rcpp | 1.0.14 | RcppAlgos | 2.9.3 |
| RcppAnnoy | 0.0.22 | RcppArmadillo | 14.4.0-1 |
| RcppCCTZ | 0.2.13 | RcppDate | 0.0.5 |
| RcppDE | 0.1.8 | RcppDist | 0.1.1 |
| RcppEigen | 0.3.4.0.2 | RcppGSL | 0.3.13 |
| RcppHNSW | 0.6.0 | RcppInt64 | 0.0.5 |
| RcppML | 0.3.7 | RcppNumerical | 0.6-0 |
| RcppParallel | 5.1.10 | RcppProgress | 0.4.2 |
| RcppRoll | 0.3.1 | RcppSpdlog | 0.0.20 |
| RcppThread | 2.2.0 | RcppTOML | 0.2.3 |
| RcppZiggurat | 0.1.7 | RCurl | 1.98-1.17 |
| Rcwl | 1.22.0 | RcwlPipelines | 1.22.0 |
| RCX | 1.10.0 | RCy3 | 2.26.0 |
| RCyjs | 2.28.0 | rDGIdb | 1.28.0 |
| Rdisop | 1.66.0 | rdist | 0.0.5 |
| Rdpack | 2.6.3 | RDRToolbox | 1.56.0 |
| reactable | 0.4.4 | reactome.db | 1.89.0 |
| ReactomeContentService4R | 1.10.0 | ReactomeGraph4R | 1.10.0 |
| ReactomeGSA | 1.20.0 | ReactomePA | 1.50.0 |
| reactR | 0.6.1 | readbitmap | 0.1.5 |
| reader | 1.0.6 | readJDX | 0.6.4 |
| ReadqPCR | 1.52.0 | readr | 2.1.5 |
| readxl | 1.4.5 | REBET | 1.24.0 |
| rebook | 1.16.0 | rebus | 0.1-3 |
| rebus.base | 0.0-3 | rebus.datetimes | 0.0-2 |
| rebus.numbers | 0.0-1 | rebus.unicode | 0.0-2 |
| receptLoss | 1.18.0 | recipes | 1.2.0 |
| reconsi | 1.18.0 | RecordLinkage | 0.4-12.4 |
| recount | 1.32.0 | recount3 | 1.16.0 |
| recountmethylation | 1.16.0 | recoup | 1.34.0 |
| RedeR | 3.2.0 | RedisParam | 1.8.0 |
| REDseq | 1.52.0 | redux | 1.1.4 |
| RefManageR | 1.4.0 | reformulas | 0.4.0 |
| regionalpcs | 1.4.0 | RegionalST | 1.4.2 |
| regioneR | 1.38.0 | regioneReloaded | 1.8.0 |
| regionReport | 1.40.0 | registry | 0.5-1 |
| regsplice | 1.32.0 | regutools | 1.18.0 |
| relations | 0.6-15 | reldist | 1.7-2 |
| relimp | 1.0-5 | remaCor | 0.0.18 |
| rematch | 2.0.0 | rematch2 | 2.1.2 |
| remotes | 2.5.0 | REMP | 1.30.0 |
| rentrez | 1.2.3 | renv | 1.1.4 |
| Repitools | 1.52.0 | repmis | 0.5 |
| repo | 2.1.5 | ReportingTools | 2.46.0 |
| reportr | 1.3.0 | reportROC | 3.6 |
| repr | 1.1.7 | reprex | 2.1.1 |
| RepViz | 1.22.0 | ReQON | 1.48.0 |
| reshape | 0.8.9 | reshape2 | 1.4.4 |
| ResidualMatrix | 1.16.0 | RESOLVE | 1.8.0 |
| restfulr | 0.0.15 | restfulSE | 1.24.0 |
| reticulate | 1.41.0.1 | retrofit | 1.6.0 |
| ReUseData | 1.6.0 | rex | 1.2.1 |
| rexposome | 1.28.0 | rfaRm | 1.18.0 |
| Rfast | 2.1.5.1 | Rfastp | 1.16.0 |
| rfPred | 1.44.0 | rGADEM | 2.54.0 |
| rGenomeTracks | 1.12.0 | rGenomeTracksData | 0.99.0 |
| rgl | 1.3.17 | RGMQL | 1.22.0 |
| RGMQLlib | 1.26.0 | RgnTX | 1.8.0 |
| rgoslin | 1.10.0 | RGraph2js | 1.34.0 |
| Rgraphviz | 2.50.0 | rGREAT | 2.8.0 |
| RGSEA | 1.40.0 | rgsepd | 1.38.0 |
| rhandsontable | 0.3.8 | rhdf5 | 2.50.2 |
| rhdf5client | 1.28.0 | rhdf5filters | 1.18.1 |
| Rhdf5lib | 1.28.0 | Rhisat2 | 1.22.0 |
| RhpcBLASctl | 0.23-42 | Rhtslib | 3.2.0 |
| RiboCrypt | 1.12.0 | RiboDiPA | 1.14.0 |
| RiboProfiling | 1.36.0 | ribor | 1.18.0 |
| riboSeqR | 1.40.0 | ribosomeProfilingQC | 1.18.0 |
| ridge | 3.3 | rifi | 1.10.0 |
| rifiComparative | 1.6.0 | RImmPort | 1.34.0 |
| Ringo | 1.66.0 | rintrojs | 0.3.4 |
| rio | 1.2.3 | Risa | 1.44.0 |
| RISmed | 2.3.0 | RITAN | 1.30.0 |
| RITANdata | 1.30.0 | RIVER | 1.30.0 |
| rjags | 4-16 | rJava | 1.0-11 |
| RJMCMCNucleosomes | 1.30.0 | rjson | 0.2.23 |
| rjsoncons | 1.3.2 | RJSONIO | 1.3-1.9 |
| Rlab | 4.0 | Rlabkey | 3.4.2 |
| rlang | 1.1.5 | RLassoCox | 1.14.0 |
| RLHub | 0.99.5 | rlist | 0.4.6.2 |
| RLMM | 1.68.0 | RLSeq | 1.5.2 |
| Rmagpie | 1.62.0 | RMallow | 1.1 |
| RMariaDB | 1.3.4 | rmarkdown | 2.29 |
| RMassBank | 3.16.0 | rmdformats | 1.0.4 |
| rmelting | 1.22.0 | rmeta | 3.0 |
| rmio | 0.4.0 | Rmisc | 1.5.1 |
| Rmixmod | 2.1.10 | Rmmquant | 1.24.0 |
| Rmpfr | 1.0-0 | Rmpi | 0.7-3.3 |
| rms | 7.0-0 | RMSNumpress | 1.0.1 |
| rmspc | 1.12.0 | RMTstat | 0.3.1 |
| rmutil | 1.1.10 | RMySQL | 0.11.0 |
| rmzqc | 0.5.4 | RNAAgeCalc | 1.18.0 |
| RNAdecay | 1.26.0 | rnaEditr | 1.16.0 |
| RNAinteract | 1.50.0 | RNAmodR | 1.20.0 |
| RNAmodR.AlkAnilineSeq | 1.20.0 | RNAmodR.ML | 1.20.0 |
| RNAmodR.RiboMethSeq | 1.20.0 | RNAsense | 1.20.0 |
| rnaseqcomp | 1.36.0 | RNAseqCovarImpute | 1.4.0 |
| RNASeqPower | 1.46.0 | RnaSeqSampleSize | 2.16.0 |
| RnaSeqSampleSizeData | 1.38.0 | RnBeads | 2.24.0 |
| RnBeads.hg19 | 1.38.0 | RnBeads.hg38 | 1.38.1 |
| rncl | 0.8.7 | RNeXML | 2.4.11 |
| rngtools | 1.5.2 | rngWELL | 0.10-10 |
| RNifti | 1.8.0 | Rnits | 1.40.0 |
| RNOmni | 1.0.1.2 | roar | 1.42.0 |
| roastgsa | 1.4.0 | robslopes | 1.1.3 |
| robust | 0.7-5 | robustbase | 0.99-4-1 |
| RobustRankAggreg | 1.2.1 | ROC | 1.82.0 |
| ROCit | 2.1.2 | ROCpAI | 1.18.0 |
| ROCR | 1.0-11 | ROI | 1.0-1 |
| ROI.plugin.lpsolve | 1.0-2 | RolDE | 1.10.0 |
| rols | 3.2.0 | ROntoTools | 2.34.0 |
| Rook | 1.2 | rootSolve | 1.8.2.4 |
| ropls | 1.38.0 | roptim | 0.1.6 |
| rorcid | 0.7.0 | ROSeq | 1.18.0 |
| ROTS | 1.34.0 | roxygen2 | 7.3.2 |
| RPA | 1.62.0 | rpart.plot | 3.1.2 |
| RPMM | 1.25 | rprimer | 1.10.0 |
| rprojroot | 2.0.4 | RProtoBufLib | 2.18.0 |
| rpx | 2.14.1 | Rqc | 1.40.0 |
| rqt | 1.32.0 | rqubic | 1.52.0 |
| rrcov | 1.7-6 | rRDP | 1.40.0 |
| RRHO | 1.46.0 | rrvgo | 1.18.0 |
| rsample | 1.2.1 | Rsamtools | 2.22.0 |
| rsbml | 2.64.0 | rScudo | 1.22.0 |
| rsemmed | 1.16.0 | RSeqAn | 1.26.0 |
| RSKC | 2.4.2 | rslurm | 0.6.2 |
| rsm | 2.10.5 | RSNNS | 0.4-17 |
| Rsolnp | 1.16 | rsparse | 0.5.3 |
| RSpectra | 0.16-2 | rSpectral | 1.0.0.10 |
| rsq | 2.7 | RSQLite | 2.3.9 |
| rstan | 2.32.7 | rstantools | 2.4.0 |
| rstatix | 0.7.2 | rstudioapi | 0.17.1 |
| Rsubread | 2.20.0 | rsvd | 1.0.5 |
| rsvg | 2.6.1 | RSVSim | 1.46.0 |
| rSWeeP | 1.18.0 | RTCA | 1.58.0 |
| RTCGA | 1.36.0 | RTCGAToolbox | 2.36.0 |
| rTensor | 1.4.8 | RTN | 2.30.0 |
| RTNduals | 1.30.0 | RTNsurvival | 1.30.0 |
| RTopper | 1.52.0 | Rtpca | 1.16.0 |
| rtracklayer | 1.66.0 | Rtreemix | 1.68.0 |
| RTriangle | 1.6-0.14 | rTRM | 1.44.0 |
| rTRMui | 1.44.0 | Rtsne | 0.17 |
| Rttf2pt1 | 1.3.12 | runibic | 1.28.0 |
| RUnit | 0.4.33 | ruv | 0.9.7.1 |
| RUVcorr | 1.38.0 | RUVnormalize | 1.40.0 |
| RUVnormalizeData | 1.26.0 | RUVSeq | 1.40.0 |
| rversions | 2.1.2 | rvest | 1.0.4 |
| rvinecopulib | 0.7.1.1.2 | Rvisdiff | 1.4.0 |
| RVS | 1.28.0 | RWeka | 0.4-46 |
| RWekajars | 3.9.3-2 | rWikiPathways | 1.26.0 |
| s2 | 1.1.7 | S4Arrays | 1.6.0 |
| S4Vectors | 0.44.0 | safe | 3.46.0 |
| safetensors | 0.1.2 | sagenhaft | 1.76.0 |
| SAIGEgds | 2.6.0 | sampleClassifier | 1.30.0 |
| sampling | 2.10 | SamSPECTRAL | 1.60.0 |
| sandwich | 3.1-1 | sangeranalyseR | 1.16.0 |
| sangerseqR | 1.42.0 | SANTA | 2.42.0 |
| SARC | 1.4.0 | sarks | 1.18.0 |
| sass | 0.4.9 | satuRn | 1.14.0 |
| SAVER | 1.1.2 | SBGNview | 1.20.0 |
| SBGNview.data | 1.20.0 | SBMLR | 2.2.0 |
| SC3 | 1.34.0 | Scale4C | 1.28.0 |
| ScaledMatrix | 1.14.0 | scales | 1.3.0 |
| scam | 1.2-18 | SCAN.UPC | 2.48.0 |
| scanMiR | 1.12.0 | scanMiRApp | 1.12.0 |
| scanMiRData | 1.12.0 | scAnnotatR | 1.12.0 |
| SCANVIS | 1.20.0 | SCArray | 1.14.0 |
| SCArray.sat | 1.6.0 | scater | 1.34.1 |
| scatterHatch | 1.12.0 | scattermore | 1.2 |
| scatterpie | 0.2.4 | scatterplot3d | 0.3-44 |
| scBFA | 1.20.0 | SCBN | 1.24.0 |
| scBubbletree | 1.8.0 | scCB2 | 1.16.0 |
| scClassify | 1.18.0 | sccomp | 1.10.0 |
| scDataviz | 1.16.0 | scDblFinder | 1.20.2 |
| scDD | 1.30.0 | scDDboost | 1.8.0 |
| scde | 2.34.0 | scDesign3 | 1.4.0 |
| scds | 1.22.0 | SCFA | 1.16.0 |
| scFeatureFilter | 1.26.0 | scFeatures | 1.6.0 |
| scGPS | 1.20.0 | schex | 1.20.0 |
| scHOT | 1.18.0 | scico | 1.5.0 |
| scider | 1.4.0 | scifer | 1.8.1 |
| scmap | 1.28.0 | scMerge | 1.22.0 |
| scMET | 1.8.0 | scmeth | 1.26.0 |
| SCnorm | 1.28.0 | scone | 1.30.0 |
| Sconify | 1.26.0 | SCOPE | 1.18.0 |
| scoreInvHap | 1.28.0 | scp | 1.16.0 |
| scPCA | 1.20.0 | scPipe | 2.6.0 |
| scran | 1.34.0 | scReClassify | 1.12.0 |
| scRecover | 1.22.0 | screenCounter | 1.6.0 |
| ScreenR | 1.8.0 | scRepertoire | 2.2.1 |
| scrime | 1.3.5 | scRNAseq | 2.20.0 |
| scRNAseqApp | 1.6.1 | scruff | 1.24.0 |
| scry | 1.18.0 | scrypt | 0.1.6 |
| scs | 3.2.4 | scShapes | 1.12.0 |
| scTensor | 2.16.0 | scTGIF | 1.20.0 |
| scTHI | 1.18.0 | sctransform | 0.4.1 |
| scTreeViz | 1.12.0 | scuttle | 1.16.0 |
| scviR | 1.6.0 | SDAMS | 1.26.0 |
| sechm | 1.14.0 | segmented | 2.1-4 |
| segmenter | 1.12.0 | segmentSeq | 2.40.0 |
| selectKSigs | 1.18.0 | selectr | 0.4-2 |
| SELEX | 1.38.0 | SemDist | 1.40.0 |
| semisup | 1.30.0 | sendmailR | 1.4-0 |
| seq.hotSPOT | 1.6.0 | seq2pathway | 1.38.0 |
| seq2pathway.data | 1.38.0 | seqArchR | 1.10.0 |
| seqArchRplus | 1.6.0 | SeqArray | 1.46.3 |
| seqbias | 1.50.0 | seqCAT | 1.28.0 |
| seqCNA | 1.48.0 | seqCNA.annot | 1.38.0 |
| seqcombo | 1.28.0 | SeqGate | 1.16.0 |
| SeqGSEA | 1.46.0 | seqinr | 4.2-36 |
| seqLogo | 1.72.0 | seqmagick | 0.1.7 |
| seqminer | 9.7 | seqPattern | 1.38.0 |
| seqsetvis | 1.26.0 | SeqSQC | 1.28.0 |
| seqTools | 1.40.0 | SeqVarTools | 1.44.0 |
| seriation | 1.5.7 | servr | 0.32 |
| sesame | 1.24.0 | sesameData | 1.24.0 |
| sessioninfo | 1.2.3 | SEtools | 1.20.0 |
| setRNG | 2024.2-1 | sets | 1.0-25 |
| settings | 0.2.7 | Seurat | 5.2.1 |
| SeuratObject | 5.0.2 | sevenbridges | 1.36.0 |
| sevenC | 1.26.0 | sf | 1.0-19 |
| sfheaders | 0.4.4 | sfsmisc | 1.1-20 |
| sftime | 0.3.0 | SGCP | 1.6.0 |
| sgeostat | 1.0-27 | SGSeq | 1.40.0 |
| shades | 1.4.0 | shadowtext | 0.1.4 |
| shape | 1.4.6.1 | SharedObject | 1.20.0 |
| shiny | 1.10.0 | shinyAce | 0.4.4 |
| shinyalert | 3.1.0 | shinyBS | 0.61.1 |
| shinybusy | 0.3.3 | shinycssloaders | 1.1.0 |
| shinycustomloader | 0.9.0 | shinyCyJS | 1.0.0 |
| shinydashboard | 0.7.2 | shinydashboardPlus | 2.0.5 |
| shinyepico | 1.14.0 | shinyFeedback | 0.4.0 |
| shinyFiles | 0.9.3 | shinyHeatmaply | 0.2.0 |
| shinyhelper | 0.3.2 | shinyjqui | 0.4.1 |
| shinyjs | 2.1.0 | shinylogs | 0.2.1 |
| shinymanager | 1.0.410 | shinyMatrix | 0.8.0 |
| shinymeta | 0.2.0.3 | shinyMethyl | 1.42.0 |
| shinypanel | 0.1.5 | shinyscreenshot | 0.2.1 |
| shinythemes | 1.2.0 | shinytitle | 0.1.0 |
| shinytoastr | 2.2.0 | shinyTree | 0.3.1 |
| shinyvalidate | 0.1.3 | shinyWidgets | 0.9.0 |
| ShortRead | 1.64.0 | SIAMCAT | 2.10.0 |
| SICtools | 1.36.0 | SIFT.Hsapiens.dbSNP137 | 1.0.0 |
| SigCheck | 2.38.0 | sigclust | 1.1.0.1 |
| sigFeature | 1.24.0 | SigFuge | 1.44.0 |
| siggenes | 1.80.0 | sights | 1.32.0 |
| Signac | 1.14.0 | signal | 1.8-1 |
| signatureSearch | 1.20.0 | signeR | 2.8.0 |
| signifinder | 1.4.0 | SigsPack | 1.20.0 |
| sigsquared | 1.38.0 | SIM | 1.76.0 |
| SIMAT | 1.38.0 | SimBindProfiles | 1.40.0 |
| SimBu | 1.8.0 | SIMD | 1.24.0 |
| SimFFPE | 1.18.0 | similaRpeak | 1.38.0 |
| SIMLR | 1.32.0 | simona | 1.4.0 |
| simpIntLists | 1.42.0 | simpleCache | 0.4.2 |
| simpleSeg | 1.8.1 | simplifyEnrichment | 2.0.0 |
| sincell | 1.38.0 | single | 1.6.0 |
| SingleCellExperiment | 1.28.1 | SingleCellSignalR | 1.18.0 |
| singleCellTK | 2.16.1 | SingleMoleculeFootprinting | 2.0.0 |
| SingleR | 2.8.0 | singscore | 1.26.0 |
| SiPSiC | 1.6.0 | sitadela | 1.14.0 |
| sitePath | 1.22.0 | sitmo | 2.0.2 |
| sizepower | 1.76.0 | sjlabelled | 1.2.0 |
| sjmisc | 2.8.10 | skewr | 1.38.0 |
| skmeans | 0.2-18 | slalom | 1.28.0 |
| slam | 0.1-55 | slider | 0.3.2 |
| slingshot | 2.14.0 | SLqPCR | 1.72.0 |
| sm | 2.2-6.0 | SMAD | 1.22.0 |
| SMAP | 1.66.0 | SmartSVA | 0.1.3 |
| smatr | 3.4-8 | SMITE | 1.34.0 |
| smoother | 1.3 | smoothie | 1.0-4 |
| SmoothWin | 3.0.0 | smurf | 1.1.7 |
| SMVar | 1.3.4 | sn | 2.1.1 |
| sna | 2.8 | SNAGEE | 1.46.0 |
| SNAGEEdata | 1.42.0 | snakecase | 0.11.1 |
| snapCGH | 1.72.0 | snapcount | 1.18.0 |
| snifter | 1.16.0 | snm | 1.54.0 |
| snow | 0.4-4 | SnowballC | 0.7.1 |
| snowfall | 1.84-6.3 | SNPediaR | 1.32.0 |
| SNPhood | 1.36.0 | SNPlocs.Hsapiens.dbSNP144.GRCh37 | 0.99.20 |
| SNPRelate | 1.40.0 | snpStats | 1.56.0 |
| softImpute | 1.4-1 | soGGi | 1.38.0 |
| som | 0.3-5.2 | SomaticSignatures | 2.42.0 |
| SOMNiBUS | 1.14.2 | sonicLength | 1.4.7 |
| sortable | 0.5.0 | SoupX | 1.6.2 |
| sourcetools | 0.1.7-1 | sp | 2.2-0 |
| SpacePAC | 1.40.0 | spacetime | 1.3-3 |
| spam | 2.11-1 | Spaniel | 1.20.0 |
| sparcl | 1.0.4 | sparklyr | 1.9.0 |
| sparrow | 1.12.0 | SparseArray | 1.6.2 |
| SparseM | 1.84-2 | sparseMatrixStats | 1.18.0 |
| sparseMVN | 0.2.2 | sparsenetgls | 1.24.0 |
| sparsepca | 0.1.2 | SparseSignatures | 2.16.0 |
| sparsesvd | 0.2-2 | sparsevctrs | 0.3.2 |
| spaSim | 1.8.0 | SpatialCPie | 1.22.0 |
| spatialDE | 1.12.0 | SpatialDecon | 1.16.0 |
| SpatialExperiment | 1.16.0 | SpatialExtremes | 2.1-0 |
| SpatialFeatureExperiment | 1.8.6 | spatialHeatmap | 2.12.1 |
| SpatialOmicsOverlay | 1.6.0 | spatialreg | 1.3-6 |
| SpatialTools | 1.0.5 | spatstat | 3.3-2 |
| spatstat.data | 3.1-6 | spatstat.explore | 3.4-2 |
| spatstat.geom | 3.3-6 | spatstat.linnet | 3.2-5 |
| spatstat.model | 3.3-5 | spatstat.random | 3.3-3 |
| spatstat.sparse | 3.1-0 | spatstat.univar | 3.1-2 |
| spatstat.utils | 3.1-3 | spatzie | 1.12.0 |
| spBayes | 0.4-8 | spData | 2.3.4 |
| spdep | 1.3-10 | spdl | 0.0.5 |
| speaq | 2.7.0 | speckle | 1.6.0 |
| specL | 1.40.0 | SpeCond | 1.60.0 |
| Spectra | 1.16.1 | SpectralTAD | 1.22.0 |
| speedglm | 0.3-5 | SPEM | 1.46.0 |
| SPIA | 2.58.0 | SPIAT | 1.8.1 |
| spicyR | 1.18.1 | SpidermiR | 1.32.0 |
| spikeLI | 2.66.0 | spiky | 1.12.0 |
| spkTools | 1.62.0 | splancs | 2.01-45 |
| splatter | 1.30.0 | SpliceWiz | 1.8.0 |
| SplicingFactory | 1.14.0 | SplicingGraphs | 1.46.0 |
| splineTimeR | 1.34.0 | SPLINTER | 1.32.0 |
| splitstackshape | 1.4.8 | splots | 1.72.0 |
| splus2R | 1.3-5 | SpotClean | 1.8.0 |
| SPOTlight | 1.10.0 | spqn | 1.18.0 |
| spsComps | 0.3.3.0 | SPsimSeq | 1.16.0 |
| spsUtil | 0.2.2 | SQLDataFrame | 1.20.0 |
| sqldf | 0.4-11 | SQUADD | 1.52.0 |
| SQUAREM | 2021.1 | squash | 1.0.9 |
| sRACIPE | 1.22.0 | SRAdb | 1.68.1 |
| srnadiff | 1.22.2 | ssc | 2.1-0 |
| sscu | 2.36.0 | sSeq | 1.44.0 |
| ssize | 1.80.0 | sSNAPPY | 1.10.0 |
| ssPATHS | 1.20.0 | ssrch | 1.22.0 |
| ssviz | 1.40.0 | stable | 1.1.6 |
| stabledist | 0.7-2 | stabs | 0.6-4 |
| stageR | 1.28.0 | standR | 1.10.0 |
| StanHeaders | 2.32.10 | staRank | 1.44.0 |
| StarBioTrek | 1.28.0 | stars | 0.6-8 |
| startupmsg | 1.0.0 | statebins | 1.4.0 |
| STATegRa | 1.42.0 | Statial | 1.8.0 |
| statip | 0.2.3 | statmod | 1.5.0 |
| statnet.common | 4.11.0 | statTarget | 1.36.0 |
| STdeconvolve | 1.6.0 | stemHypoxia | 1.42.0 |
| stepNorm | 1.78.0 | stJoincount | 1.8.0 |
| stopwords | 2.3 | storr | 1.2.5 |
| strandCheckR | 1.24.0 | strawr | 0.0.92 |
| Streamer | 1.52.0 | strex | 2.0.1 |
| STRINGdb | 2.18.0 | stringdist | 0.9.15 |
| stringfish | 0.16.0 | stringi | 1.8.4 |
| stringr | 1.5.1 | strucchange | 1.5-4 |
| struct | 1.18.0 | Structstrings | 1.22.1 |
| structToolbox | 1.18.2 | StructuralVariantAnnotation | 1.22.0 |
| styler | 1.10.3 | SubCellBarCode | 1.22.0 |
| subSeq | 1.36.0 | SUITOR | 1.8.0 |
| SummarizedBenchmark | 2.20.0 | SummarizedExperiment | 1.36.0 |
| summarytools | 1.1.2 | Summix | 2.12.0 |
| superheat | 0.1.0 | SuperLearner | 2.0-29 |
| supersigs | 1.14.0 | SuppDists | 1.1-9.8 |
| supraHex | 1.40.0 | surfaltr | 1.12.0 |
| survcomp | 1.56.0 | survey | 4.4-2 |
| survivalAnalysis | 0.3.0 | survivalROC | 1.0.3.1 |
| survivalsvm | 0.0.5 | survminer | 0.5.0 |
| survMisc | 0.5.6 | survtype | 1.22.0 |
| sva | 3.54.0 | svaNUMT | 1.12.0 |
| svaRetro | 1.12.0 | svd | 0.5.8 |
| svglite | 2.1.3 | svgPanZoom | 0.3.4 |
| SVMDO | 1.6.0 | svMisc | 1.4.3 |
| svUnit | 1.0.6 | swamp | 1.5.1 |
| SWATH2stats | 1.36.0 | SwathXtend | 2.28.0 |
| swfdr | 1.32.0 | switchBox | 1.42.0 |
| switchde | 1.32.0 | sylly | 0.1-6 |
| sylly.en | 0.1-3 | synapsis | 1.12.0 |
| synapter | 2.30.0 | synergyfinder | 3.14.0 |
| SynExtend | 1.18.0 | synlet | 2.6.0 |
| SynMut | 1.22.0 | syntenet | 1.8.1 |
| sys | 3.4.3 | systemfonts | 1.2.1 |
| systemPipeR | 2.12.0 | systemPipeShiny | 1.16.0 |
| systemPipeTools | 1.14.0 | syuzhet | 1.0.7 |
| tadar | 1.4.0 | TADCompare | 1.16.0 |
| tagcloud | 0.6 | tanggle | 1.12.0 |
| TAPseq | 1.18.0 | target | 1.20.0 |
| TargetDecoy | 1.12.0 | TargetScore | 1.44.0 |
| TargetSearch | 2.8.0 | TBSignatureProfiler | 1.14.0 |
| TBX20BamSubset | 1.42.0 | TCA | 1.2.1 |
| TCC | 1.46.0 | TCGAbiolinks | 2.34.1 |
| TCGAbiolinksGUI.data | 1.26.0 | TCGAutils | 1.26.0 |
| tcltk2 | 1.2-11 | TCseq | 1.30.0 |
| TDbasedUFE | 1.6.0 | TDbasedUFEadv | 1.6.0 |
| TeachingDemos | 2.13 | TEKRABber | 1.10.0 |
| tensor | 1.5 | tensorA | 0.36.2.1 |
| tensorflow | 2.16.0 | TENxIO | 1.8.2 |
| TENxPBMCData | 1.24.0 | tenXplore | 1.28.0 |
| TEQC | 4.28.0 | ternarynet | 1.50.0 |
| terra | 1.8-29 | terraTCGAdata | 1.10.0 |
| tester | 0.2.0 | testthat | 3.2.3 |
| text2vec | 0.6.4 | textclean | 0.9.3 |
| textshape | 1.7.5 | textshaping | 1.0.0 |
| textstem | 0.1.4 | TFARM | 1.28.0 |
| tfautograph | 0.3.2 | TFBSTools | 1.44.0 |
| TFEA.ChIP | 1.26.0 | TFHAZ | 1.28.0 |
| TFisher | 0.2.0 | TFMPvalue | 0.0.9 |
| tfprobability | 0.15.1 | tfruns | 1.5.3 |
| TFutils | 1.26.0 | TH.data | 1.1-3 |
| threejs | 0.3.3 | tibble | 3.2.1 |
| tictoc | 1.2.1 | tidybayes | 3.0.7 |
| tidybulk | 1.18.0 | tidydr | 0.0.5 |
| tidygraph | 1.3.1 | tidyHeatmap | 1.11.6 |
| tidyr | 1.3.1 | tidyselect | 1.2.1 |
| tidySingleCellExperiment | 1.16.0 | tidySummarizedExperiment | 1.16.0 |
| tidytext | 0.4.2 | tidytidbits | 0.3.2 |
| tidytree | 0.4.6 | tidyverse | 2.0.0 |
| tiff | 0.1-12 | tigre | 1.60.0 |
| tiledb | 0.30.2 | TileDBArray | 1.16.0 |
| tilingArray | 1.84.0 | timechange | 0.3.0 |
| timecourse | 1.78.0 | timeDate | 4041.110 |
| timeOmics | 1.18.0 | timescape | 1.30.0 |
| timeSeries | 4041.111 | TimiRGeN | 1.11.0 |
| timsac | 1.3.8-4 | TIN | 1.38.0 |
| tinytex | 0.56 | tippy | 0.1.0 |
| TissueEnrich | 1.26.0 | TitanCNA | 1.44.0 |
| tkrplot | 0.0-29 | tkWidgets | 1.84.0 |
| tLOH | 1.14.0 | tm | 0.7-16 |
| TMB | 1.9.17 | TMixClust | 1.28.0 |
| tmvtnorm | 1.6 | TNBC.CMS | 1.18.0 |
| TnT | 1.28.0 | TOAST | 1.20.0 |
| toastui | 0.3.4 | tokenizers | 0.3.0 |
| tomoda | 1.16.0 | tomoseqr | 1.10.0 |
| TOP | 1.6.0 | topconfects | 1.22.0 |
| topdownr | 1.28.0 | topGO | 2.58.0 |
| topicmodels | 0.2-17 | torch | 0.14.2 |
| ToxicoGx | 2.10.0 | TPP | 3.34.0 |
| TPP2D | 1.22.0 | tracktables | 1.40.0 |
| trackViewer | 1.42.0 | tractor.base | 3.4.2 |
| tradeSeq | 1.20.0 | TrajectoryGeometry | 1.14.0 |
| TrajectoryUtils | 1.14.0 | transcriptogramer | 1.28.0 |
| transcriptR | 1.34.0 | transformGamPoi | 1.12.0 |
| transformr | 0.1.5 | transite | 1.24.0 |
| tRanslatome | 1.44.0 | transomics2cytoscape | 1.16.0 |
| transport | 0.15-4 | TransView | 1.46.0 |
| traseR | 1.36.0 | traviz | 1.8.0 |
| TreeAndLeaf | 1.18.0 | treeio | 1.30.0 |
| treekoR | 1.14.0 | treemap | 2.4-4 |
| TreeSummarizedExperiment | 2.14.0 | TREG | 1.10.0 |
| Trendy | 1.28.0 | TRESS | 1.12.0 |
| tricycle | 1.14.0 | triebeard | 0.4.1 |
| trigger | 1.52.0 | trio | 3.44.0 |
| triplex | 1.46.0 | tripr | 1.12.0 |
| tRNA | 1.24.0 | tRNAdbImport | 1.24.0 |
| tRNAscanImport | 1.26.0 | TRONCO | 2.38.0 |
| truncdist | 1.0-2 | truncnorm | 1.0-9 |
| trust | 0.1-8 | TSCAN | 1.44.0 |
| tseries | 0.10-58 | tsne | 0.1-3.1 |
| TSP | 1.2-4 | ttgsea | 1.14.0 |
| TTMap | 1.28.0 | TTR | 0.24.4 |
| ttservice | 0.4.1 | TurboNorm | 1.54.0 |
| TVTB | 1.32.0 | tweeDEseq | 1.52.0 |
| tweedie | 2.3.5 | tweenr | 2.0.3 |
| twilight | 1.82.0 | twoddpcr | 1.30.0 |
| txcutr | 1.12.0 | TxDb.Celegans.UCSC.ce6.ensGene | 3.2.2 |
| TxDb.Dmelanogaster.UCSC.dm3.ensGene | 3.2.2 | TxDb.Dmelanogaster.UCSC.dm6.ensGene | 3.12.0 |
| TxDb.Hsapiens.UCSC.hg18.knownGene | 3.2.2 | TxDb.Hsapiens.UCSC.hg19.knownGene | 3.2.2 |
| TxDb.Hsapiens.UCSC.hg38.knownGene | 3.20.0 | TxDb.Mmusculus.UCSC.mm10.knownGene | 3.10.0 |
| TxDb.Mmusculus.UCSC.mm9.knownGene | 3.2.2 | TxDb.Rnorvegicus.UCSC.rn4.ensGene | 3.2.2 |
| txdbmaker | 1.2.1 | tximeta | 1.24.0 |
| tximport | 1.34.0 | tximportData | 1.34.0 |
| TypeInfo | 1.68.0 | tzdb | 0.5.0 |
| UCell | 2.10.1 | ucminf | 1.2.2 |
| UCSC.utils | 1.2.0 | Ularcirc | 1.24.0 |
| umap | 0.2.10.0 | UMI4Cats | 1.16.0 |
| uncoverappLib | 1.16.0 | UNDO | 1.48.0 |
| unifiedWMWqPCR | 1.42.0 | UniProt.ws | 2.46.1 |
| uniqtag | 1.0.1 | Uniquorn | 2.26.0 |
| units | 0.8-7 | universalmotif | 1.24.2 |
| unmarked | 1.5.0 | updateObject | 1.10.0 |
| UpSetR | 1.4.0 | urca | 1.3-4 |
| urlchecker | 1.0.1 | urltools | 1.7.3 |
| usethis | 3.1.0 | uSORT | 1.32.0 |
| utf8 | 1.2.4 | uuid | 1.2-1 |
| uwot | 0.2.3 | V8 | 6.0.2 |
| VAExprs | 1.12.0 | valr | 0.8.3 |
| VAM | 1.1.0 | VanillaICE | 1.68.0 |
| VarCon | 1.14.0 | VarfromPDB | 2.2.10 |
| varhandle | 2.0.6 | variancePartition | 1.36.3 |
| VariantAnnotation | 1.52.0 | VariantExperiment | 1.20.0 |
| VariantFiltering | 1.42.0 | VariantTools | 1.48.0 |
| varSelRF | 0.7-8 | VaSP | 1.18.0 |
| vbmp | 1.74.0 | vcd | 1.4-13 |
| VCFArray | 1.22.0 | vcfR | 1.15.0 |
| vctrs | 0.6.5 | VDJdive | 1.8.0 |
| VegaMC | 3.44.0 | vegan | 2.6-10 |
| velociraptor | 1.16.0 | veloviz | 1.12.0 |
| venn | 1.12 | VennDetail | 1.22.0 |
| VennDiagram | 1.7.3 | verification | 1.44 |
| VERSO | 1.16.0 | VGAM | 1.1-13 |
| vidger | 1.26.0 | VIM | 6.2.2 |
| vioplot | 0.5.1 | viper | 1.40.0 |
| vipor | 0.4.7 | viridis | 0.6.5 |
| viridisLite | 0.4.2 | visdat | 0.6.0 |
| ViSEAGO | 1.16.0 | visNetwork | 2.1.2 |
| vissE | 1.14.0 | Voyager | 1.8.1 |
| VplotR | 1.16.0 | vroom | 1.6.5 |
| vsclust | 1.8.0 | vsn | 3.74.0 |
| vtpnet | 0.46.0 | vulcan | 1.28.0 |
| waddR | 1.20.0 | waffle | 1.0.2 |
| waiter | 0.2.5 | waldo | 0.6.1 |
| warp | 0.2.1 | wateRmelon | 2.12.0 |
| wavClusteR | 2.40.0 | waveslim | 1.8.5 |
| wavethresh | 4.7.3 | wdm | 0.2.6 |
| weaver | 1.72.0 | webbioc | 1.78.0 |
| webchem | 1.3.0 | webshot | 0.5.5 |
| webutils | 1.2.2 | weitrix | 1.18.0 |
| wesanderson | 0.3.7 | WGCNA | 1.73 |
| wheatmap | 0.2.0 | whisker | 0.4.1 |
| widgetTools | 1.84.0 | wiggleplotr | 1.30.0 |
| withr | 3.0.2 | wk | 0.9.4 |
| word2vec | 0.4.0 | wordcloud | 2.6 |
| wordcloud2 | 0.2.1 | wpm | 1.16.0 |
| wppi | 1.14.0 | Wrench | 1.24.0 |
| writexl | 1.5.2 | WriteXLS | 6.7.0 |
| wrswoR | 1.1.1 | xcms | 4.4.0 |
| xcore | 1.10.0 | XDE | 2.52.0 |
| Xeva | 1.22.0 | xfun | 0.51 |
| xgboost | 1.7.8.1 | XINA | 1.24.0 |
| xmapbridge | 1.64.0 | XML | 3.99-0.18 |
| xml2 | 1.3.8 | XML2R | 0.0.8 |
| xmlparsedata | 1.0.5 | XNAString | 1.14.0 |
| xopen | 1.0.1 | xtable | 1.8-4 |
| XtraSNPlocs.Hsapiens.dbSNP144.GRCh37 | 0.99.12 | xts | 0.14.1 |
| XVector | 0.46.0 | yaImpute | 1.0-34.1 |
| yaml | 2.3.10 | yamss | 1.32.0 |
| YAPSA | 1.32.0 | yardstick | 1.3.2 |
| yarn | 1.32.0 | yeastCC | 1.46.0 |
| yeastExpData | 0.52.0 | yesno | 0.1.3 |
| yulab.utils | 0.2.0 | zCompositions | 1.5.0-4 |
| zeallot | 0.1.0 | zellkonverter | 1.16.0 |
| zenith | 1.8.0 | zFPKM | 1.28.0 |
| zigg | 0.0.2 | zinbwave | 1.28.0 |
| zip | 2.3.2 | zlibbioc | 1.52.0 |
| zoo | 1.8-13 | ZygosityPredictor | 1.6.0 |