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Product

  • JupyterHub Server: a popular open-source JupyterHub platform, which allows users to run interactive computing sessions with a variety of programming languages.

  • RStudio Server: a pre-configured RStudio Server environment, making it easy to set up a remote development environment for R programming.

  • RShiny Server: a pre-configured RShiny Server environment, enabling you to host Shiny apps in the cloud.

  • VPN Server: The VPN Server with Web GUI Admin powered by OpenVPN provides secure and encrypted communication channels, ensuring seamless connectivity and privacy for users across networks.

  • Linux with GUI Desktop: a desktop environment on top of a Linux operating system, providing a familiar graphical interface for users who prefer it.

  • Linux SFTP Server: a pre-configured SFTP server environment, enabling you to easily and securely transfer files to and from your cloud instances.

  • API Server: ClamAV Antivirus for AWS S3 Data: a pre-configured environment for running a server that performs virus scans using ClamAV.

  • Stable Diffusion with Web User Interface: specifically tailored for Stable Diffusion, a state-of-the-art solution in image generation and training. It's an ideal tool for artists, developers, and AI enthusiasts, empowering them to harness the capabilities of machine learning to effortlessly create and modify images.

Customer Support

At Elm Computing, we're committed to providing exceptional customer support to help you get the most out of our products and services. If you need assistance with any of our offerings, please don't hesitate to reach out to us at support@elmcomputing.io. Our dedicated support team is always ready to help you with any technical issues or general inquiries you may have, and we'll do our best to respond to your inquiries as quickly as possible. Thank you for choosing Elm Computing.

The virus scan API server using ClamAV is a pre-configured container image designed to facilitate the setup and deployment of an API server for performing virus scans on data files prior to or after being uploaded into AWS S3 buckets. It includes the ClamAV antivirus software, which is a powerful and widely used open-source solution for detecting and mitigating malware threats.

It provides a streamlined environment for developers to integrate virus scanning capabilities into their applications or systems. With this product, users can quickly develop a reliable virus scan solution, ensuring the protection of their files and data from potential malware infections.

ClamAV AntiVirus

ClamAV is an open-source antivirus software designed to detect and protect against a wide range of malware threats on Unix-based systems, including Linux, macOS, and BSD. It is one of the most widely used antivirus solutions for servers and network-based security applications. ClamAV is highly regarded for its effectiveness in identifying viruses, trojans, worms, and other malicious software, making it a crucial tool in safeguarding critical systems from potential threats.

ClamAV operates on a signature-based detection method, where it maintains an extensive database of virus signatures and patterns that are regularly updated to stay current with emerging threats. This enables ClamAV to efficiently scan files, directories, and emails for known malicious code and promptly flag any suspicious activity. Additionally, it offers the option to integrate with various mail servers and web applications, providing real-time scanning and protection.

What sets ClamAV apart is its open-source nature, which fosters a robust community of developers and contributors continuously working to improve its capabilities. This collaborative approach ensures that ClamAV remains a reliable and up-to-date antivirus solution, freely available to the broader community. Whether used as a standalone antivirus or in conjunction with other security tools, ClamAV offers essential protection for systems vulnerable to malware attacks.

Running ECS Task with Fargate

This guide provides step-by-step instructions to run the virus scan API server using Amazon ECS Fargate. If not mentioned, please use the default configurations.


Step 1: Create an ECS Task Definition

  1. Log into the Amazon ECS Console.

  2. Select Task Definitions and click Create new Task Definition.

  3. Under Task definition configuration:

    • Task definition family: Set a name (e.g., elm-clamav-virus-scan-api).
  4. Under Infrastructure requirements:

    • Launch Type: Fargate
    • Operating System/Architecture: Linux/X86_64
    • Task size: Set 1 vCPU and 3GB memory (initial settings, adjustable as needed for handling larger or more files).
    • Task role and Task execution role: Ensure the following IAM policies are attached to the roles:
      • AmazonECSTaskExecutionRolePolicy
      • AmazonS3ReadOnlyAccess
      • AWSMarketplaceMeteringRegisterUsage
  5. Under Container - 1:

    • Container Name: Set a name (e.g., clamav-virus-scan-api).

    • Image URI:

      709825985650.dkr.ecr.us-east-1.amazonaws.com/elm-computing/clamav-virus-scan-api:1.2.1.2
      

      where 1.2.1.2 is the version number and can be replaced for other versions.

    • Port Mappings:

      • Container Port: 8080
      • Protocol: TCP
      • Port Name: virus-scan-api
      • App Protocol: http
    • Health Check: Command:

      CMD-SHELL, curl -f http://localhost:8080/api/healthcheck || exit 1
      
      • Interval: 30 seconds
      • Timeout: 5 seconds
      • Start period: 30 seconds
      • Retries: 3
  6. Click Create to finalize the task definition.


Step 2: Run the Task

  1. In the Amazon ECS Console, select Clusters from the left-hand side and choose an existing cluster or create a new one.

  2. Click on the Tasks tab, then click Run new Task.

  3. Under Compute configuration (advanced):

    • Compute options: Launch type
    • Launch Type: Fargate.
  4. Under Deployment configuration:

    • Application type: Task
    • Family: Select the task definition created in Step 1.
  5. Under Networking:

    • VPC and Subnet: Choose the appropriate VPC and subnet.
  6. For Security Group, ensure the inbound port 8080 is open to all IPs or to a specific range:

    • Type: Custom TCP Rule.
    • Port: 8080.
    • Source: 0.0.0.0/0 (or restrict the IP range for secure access).
    • Public IP: Turned On (for security concerns, this can be turned off if the API server is only accessible from within the same subnet).
  7. Click Create.


Step 3: Monitor the Task

  1. Go to the Tasks tab to check the Health status. It usually takes around 2-3 minutes for the task to reach the "Healthy" status.

  2. Check the task logs via Amazon CloudWatch Logs to ensure there are no errors reported and that the task is functioning correctly.


By following these steps, you will successfully run your ClamAV Virus Scan API container image with an initial task size of 1 vCPU and 3GB memory, adjustable as needed for handling larger or more files for scanning.

Scan an S3 object

After starting the EC2 instance, you can access the API Server using its IP address and the port 8080. For instance, if the IP address is 172.31.39.37, you can perform file scans on the S3 bucket by making requests to http://172.31.39.37:8080/api/clamav/scan/s3/object.

curl -d '{"stream": true, "bucket": "elm-bucket-virus-scan", "key": "test/virus_test.txt"}' -H 'Content-Type: application/json' http://172.31.39.37:8080/api/clamav/scan/s3/object 

The three parameters have the following meanings:

  • stream: This parameter determines how the server should handle the file download. When set to false, it means that the server will download the whole file into memory first before saving it to disk. When set to true, the server will stream the file directly to disk in smaller chunks. Using streaming can be advantageous when dealing with large files as it reduces the memory footprint required for the download process. It allows for more efficient resource utilization and enables the server to handle files that might otherwise exceed available memory capacity.

  • bucket: This parameter specifies the name of the S3 bucket from which the file should be retrieved.

  • key: This parameter represents the key of the file within the S3 bucket. It specifies the specific file that should be downloaded and scanned.

Response

A json format string will be returned. The possible return codes are 0, 1, 2, and 99.

  • Clean:
{"code":0,"message":"OK"}
  • Infected: For example, when Eicar-Signature is identified, the response would be
{"code":1,"message":"Eicar-Signature FOUND"}
  • Scan Errors: For example, when having file access error, the response would be
{"code":2,"message":"Can't access file /tmp/test/file"}
  • Other Errors: For example, when the IAM role is not properly set, the response would be
{"code":99,"message":"no credentials in the property bag"}

Scan a local file on the API Server

you can perform file scans on local files by making requests to http://172.31.39.37:8080/api/clamav/scan/file.

curl -d '{"file": "/tmp/test.txt"}' -H 'Content-Type: application/json' http://172.31.39.37:8080/api/clamav/scan/file

Shell

curl -d '{"stream": true, "bucket": "elm-bucket-virus-scan", "key": "test/virus_test.txt"}' -H 'Content-Type: application/json' http://172.31.39.37:8080/api/clamav/scan/s3/object 

Python

import requests
import json

def elm_scan_object(url, stream, bucket, key):
    # Define the payload as a dictionary
    payload = {
		"stream": stream,
        "bucket": bucket,
        "key": key
    }

    # Set the headers
    headers = {
        "Content-Type": "application/json"
    }

    # Send a POST request to the API endpoint
    response = requests.post(url, data=json.dumps(payload), headers=headers)

    # Check the response status code
    if response.status_code == 200:
        # Request was successful
        data = response.json()  # Extract the JSON data from the response
        return data
    else:
        # Request was not successful
        print(f"Request failed with status code: {response.status_code}")
        return None

if __name__ == '__main__':        
    result = elm_scan_object(
        url = "http://172.31.39.37:8080/api/clamav/scan/s3/object", \
		stream = True, \
        bucket = 'elm-bucket-virus-scan', \
        key = 'virus_test.txt')
    
    if result:
        print(result)
        print(result['code'])
        print(result['message'])

JavaScript

const axios = require('axios');

async function elmScanObject(url, stream, bucket, key) {
  try {
    const payload = {
	  stream,
      bucket,
      key,
    };

    const headers = {
      'Content-Type': 'application/json',
    };

    const response = await axios.post(url, payload, { headers });

    if (response.status === 200) {
      return response.data;
    } else {
      console.log(`Request failed with status code: ${response.status}`);
      return null;
    }
  } catch (error) {
    console.error('An error occurred:', error.message);
    return null;
  }
}

async function main() {
  const url = 'http://172.31.39.37:8080/api/clamav/scan/s3/object';
  const stream = true;
  const bucket = 'elm-bucket-virus-scan';
  const key = 'virus_test.txt';

  const result = await elmScanObject(url, stream, bucket, key);

  if (result) {
    console.log(result);
    console.log(result.code);
    console.log(result.message);
  }
}

main();

Dart

import 'dart:convert';
import 'package:http/http.dart' as http;

Future<Map<String, dynamic>?> elmScanObject(String url, bool stream, String bucket, String key) async {
  try {
    final payload = {
      'stream': stream,
      'bucket': bucket,
      'key': key,
    };

    final headers = {
      'Content-Type': 'application/json',
    };

    final response = await http.post(Uri.parse(url), headers: headers, body: jsonEncode(payload));

    if (response.statusCode == 200) {
      return jsonDecode(response.body);
    } else {
      print('Request failed with status code: ${response.statusCode}');
      return null;
    }
  } catch (error) {
    print('An error occurred: $error');
    return null;
  }
}

void main() async {
  final url = 'http://172.31.39.37:8080/api/clamav/scan/s3/object';
  final stream = true;
  final bucket = 'elm-bucket-virus-scan';
  final key = 'virus_test.txt';

  final result = await elmScanObject(url, stream, bucket, key);

  if (result != null) {
    print(result);
    print(result['code']);
    print(result['message']);
  }
}

Go

package main

import (
	"bytes"
	"encoding/json"
	"fmt"
	"io/ioutil"
	"net/http"
)

func elmScanObject(url string, stream bool, bucket string, key string) (map[string]interface{}, error) {
	payload := map[string]interface{}{
		"stream": stream,
		"bucket": bucket,
		"key":    key,
	}

	payloadBytes, err := json.Marshal(payload)
	if err != nil {
		return nil, err
	}

	req, err := http.NewRequest("POST", url, bytes.NewBuffer(payloadBytes))
	if err != nil {
		return nil, err
	}

	req.Header.Set("Content-Type", "application/json")

	client := &http.Client{}
	resp, err := client.Do(req)
	if err != nil {
		return nil, err
	}
	defer resp.Body.Close()

	respBody, err := ioutil.ReadAll(resp.Body)
	if err != nil {
		return nil, err
	}

	if resp.StatusCode == http.StatusOK {
		var data map[string]interface{}
		err = json.Unmarshal(respBody, &data)
		if err != nil {
			return nil, err
		}
		return data, nil
	} else {
		return nil, fmt.Errorf("Request failed with status code: %d", resp.StatusCode)
	}
}

func main() {
	url := "http://172.31.39.37:8080/api/clamav/scan/s3/object"
	stream := true
	bucket := "elm-bucket-virus-scan"
	key := "virus_test.txt"

	result, err := elmScanObject(url, stream, bucket, key)
	if err != nil {
		fmt.Println("An error occurred:", err)
		return
	}

	if result != nil {
		fmt.Println(result)
		fmt.Println(result["code"])
		fmt.Println(result["message"])
	}
}

Version 1.2.1.2

  • ClamAV: 1.2.1

  • Enabled detecting OLE2 files containing VBA macros, which were not detected by signatures will be marked as "Heuristics.OLE2.ContainsMacros".

  • Enabled AlertExceedsMax.

    Files exceeding the MaxFileSize (100M), MaxScanSize (400M), or MaxRecursion (10) limit will be flagged with the virus name starting with "Heuristics.Limits.Exceeded".

    If your scan is expected to trigger the alert, please contact us at support@elmcomputing.io

API endpoints

  • http://ip-address:8080/api/clamav/scan/s3/object

  • http://ip-address:8080/api/clamav/scan/file

  • http://ip-address:8080/api/healthcheck

This AMI offers two ways to set up and use:

  1. RStudio IDE with AI Assistant within Linux GUI Desktop
  2. Regular RStudio Server access

1. RStudio IDE with AI Assistant within Linux GUI Desktop

To connect to the Linux GUI Desktop on your EC2 instance using an RDP client:

  1. Use the public IP address of the instance as the PC name.
  2. The default username is ruser.
  3. The password is the EC2 instance ID, which follows the format i-0c7xxxxxxxxxxxxxx. Replace this with your actual instance ID found in the AWS Management Console under the Instances section.
  4. Proceed to connect. You may receive a security warning about the certificate; you can safely choose to continue.

RDP Client Downloads:

This setup allows you to remotely access your instance using the Remote Desktop Protocol (RDP) with the provided credentials.

Connection Steps

Detailed steps for connecting to the Linux GUI Desktop are available here.

Launch RStudio IDE

Once connected, start the RStudio IDE with AI Assistant:

  1. Navigate to:

Applications -> Development -> RStudio

  1. This will launch the RStudio IDE within your Linux environment.

Steps to Start the gptstudio RShiny App in the Viewer Panel

  1. Load the gptstudio Library

    library(gptstudio)
    
  2. Set the OpenAI API Key

    You need an API key from OpenAI to use the gptstudio OpenAI features. You can obtain your key by signing up or logging into your account on the OpenAI website. After obtaining the key, set it using the following command:

    Sys.setenv(OPENAI_API_KEY = "your_openai_api_key")
    
  3. Launch the Chat App

    gptstudio_chat()
    
  4. Check the Port Number in the Error Message:

    If an error occurs, note the port number shown in the error message. For example, the error message might indicate:

    Failed to connect to 127.0.0.1 port 3570 after 0 ms: Connection refused
    

    In this case, the port is 3570.

  5. Open the App in the Viewer Pane

    Replace the port number accordingly:

    rstudioapi::viewer("http://127.0.0.1:<port_number>")
    

    For example, if the port is 3570, use:

    rstudioapi::viewer("http://127.0.0.1:3570")
    

These steps will launch the gptstudio RShiny app and display it in RStudio’s Viewer panel.

main page


2. Regular RStudio Server Access

After the EC2 instance is started, you can access RStudio Server via the public IP address.

For example, if the IP address is 10.11.12.13, enter the following URL in your browser

http://10.11.12.13

to access the login page as below:

main page

Login Credentials

  • Username: ruser
  • Password: The EC2 instance ID (format: i-0c7xxxxxxxxxxxxxx)

Automatic Redirect from HTTP to HTTPS

All HTTP traffic is automatically redirected to HTTPS to ensure encrypted and secure communication.

Self-Signed Certificate

  • The HTTPS connection uses a self-signed certificate.
  • The first time you access the site, you may need to accept the self-signed certificate in your browser.
  • This step is necessary to establish a secure connection.

IP Address Changes

  • If the IP address changes, a new self-signed certificate will be generated.
  • You may need to accept the new certificate in your browser to re-establish a secure connection.

Additional Information

  • SSH Username: ubuntu
  • SSH Port: 22

RStudio Server

    R: 4.4.2

    rstudio-server: 2024.04.2-764

Release Notes

Integrated RStudio Server with Xfce GUI Desktop, featuring an AI Assistant for the RStudio IDE.

This AMI provides thousands of R packages covering various domains such as data science, machine learning, economitrics, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, reproducible research, phylogenetics, web technologies, hydrology, sports analytics, natural language processing, actuarial science, optimization, genomics, proteomics, metabolomics, transcriptomics, and other omics.

R packages (4303)

packageversionpackageversion
abc2.2.1abc.data1.1
ABCoptim0.15.0abcrf1.9
abglasso0.1.1abind1.4-8
abtest1.0.1accrualPlot1.0.7
acebayes1.10acepack1.4.2
ACNE0.9.1acp2.1
acs2.1.4ACSWR1.0
ActivePathways2.0.5actuar3.3-4
actuaRE0.1.5ActuarialM0.1.0
actuaryr1.1.1actxps1.5.0
ada2.0-5adagio0.9.2
adaptivetau2.3-2adaptMCMC1.5
adaptr1.4.0ADAPTS1.0.22
adaptsmoFMRI1.2adaptTest1.2
additivityTests1.1-4.2ade41.7-22
ade4TkGUI0.3-1adegenet2.1.10
adegraphics1.0-21adehabitatHR0.4.22
adehabitatHS0.3.18adehabitatLT0.3.28
adehabitatMA0.3.17adephylo1.1-16
adespatial0.3-24ADGofTest0.3
adimpro0.9.7.2adiv2.2.1
adjclust0.6.10adlift1.4-5
admisc0.36AdMit2.1.9
ads1.5-10AdvancedBasketballStats1.0.1
AER1.2-14affy1.82.0
affyio1.74.0africamonitor0.2.4
agricolae1.3-7agricolaeplotr0.5.0
agridat1.24agriwater1.0.2
agvgd0.1.2AhoCorasickTrie0.1.2
aion1.1.0airGR1.7.6
airGRdatasets0.2.1airGRdatassim0.1.3
airGRiwrm0.7.0airGRteaching0.3.3
airports0.1.0airr1.5.0
ajv1.0.0akima0.6-3.4
alabama2023.1.0alakazam1.3.0
aLFQ1.3.6AlgDesign1.2.1.1
aliases2entrez0.1.2almanac1.0.0
alpaca0.3.4alphavantager0.1.3
altair4.2.3ALTopt0.1.2
Amelia1.8.2ammiBayes1.0-2
ampir1.1.0AMR2.1.1
anabel3.0.1AnaCoDa0.1.4.4
anacor1.1-4analogsea1.0.7.2
analogue0.17-7anesrake0.80
animation2.7anipaths0.10.3
anMC0.2.5annotate1.82.0
AnnotationBustR1.3.0AnnotationDbi1.66.0
AnnuityRIR1.0-0Anthropometry1.19
anytime0.3.9ao1.1.0
aod1.3.3aoos0.5.0
AovBay0.1.0apc2.0.0
apcluster1.4.13ape5.8
apex1.0.6APFr1.0.2
aphid1.3.5aphylo0.3-3
apisensr1.0.0aplot0.2.3
apollo0.3.4approximator1.2-8
apsimx2.8.0ARCensReg3.0.1
arcgislayers0.3.1arcgisutils0.3.1
archetypes2.2-0.1archive1.1.9
archivist2.3.8arcpbf0.1.6
ArDec2.1-1ARDL0.2.4
ardl.nardl1.3.0areal0.1.8
arfima1.8-1argo3.0.2
argparse2.2.3arima23.3.0
arkhe1.7.0arm1.14-4
aroma.affymetrix3.2.2aroma.apd0.7.0
aroma.cn1.7.1aroma.core3.3.1
aroma.light3.34.0arpr0.1.2
arrangements1.1.9arrow17.0.0.1
ars0.8arsenal3.6.3
aRxiv0.10ascii2.6
asd2.2ash1.0-15
ashr2.2-63AsioHeaders1.22.1-2
askpass1.2.1aspect1.0-6
ASSA2.0assertthat0.2.1
AssetCorr1.0.4astsa2.1
asymmetry2.0.4ata1.1.1
atom4R0.3-3atRisk0.1.0
attempt0.3.1attention0.4.0
AUC0.3.2audio0.1-11
autoFRK1.4.3autoimage2.2.3
automap1.1-12autostsm3.1.5
av0.9.2aweek1.0.3
aws2.5-6aws.signature0.6.0
awsMethods1.1-1AzureAppInsights0.3.1
AzureAuth1.3.3AzureCognitive1.0.1
AzureContainers1.3.2AzureCosmosR1.0.0
AzureGraph1.3.4AzureKusto1.1.3
AzureQstor1.0.1AzureRMR2.4.4
AzureStor3.7.0AzureTableStor1.0.0
AzureVision1.0.2AzureVM2.2.2
babelgene22.9babelwhale1.2.0
babette2.3.4BACCO2.1-0
BACCT1.0backports1.5.0
backtest0.3-4bacondecomp0.1.1
baggr0.7.8bain0.2.11
BalancedSampling2.0.6BaM1.0.3
bama1.3.0bamdit3.4.2
bamlss1.2-5BAMMtools2.1.12
bang1.0.4BANOVA1.2.1
BarcodingR1.0-3BART2.9.9
bartCause1.0-9bartcs1.2.2
bartMachine1.3.4.1bartMachineJARs1.2.1
BAS1.7.3basad0.3.0
base642.0.2base64enc0.1-3
base64url1.4baseballr1.6.0
basicMCMCplots0.2.7BASiNET0.0.5
BaSkePro1.1.1BasketballAnalyzeR0.5.0
BASS1.3.1BatchExperiments1.4.3
BatchJobs1.9batchmeans1.0-4
BAwiR1.3.2baycn1.2.0
bayefdr0.2.1bayes4psy1.2.12
bayesAB1.1.3bayesammi0.2.0
bayesanova1.6BayesARIMAX0.1.1
BayesBinMix1.4.1bayesbio1.0.0
bayesboot0.2.2BayesBP1.1
BayesCACE1.2.3BayesCombo1.0
BayesComm0.1-2bayescopulareg0.1.3
bayescount0.9.99-9BayesCR2.1
bayesCT0.99.3BayesCTDesign0.6.1
BayesDA2012.04-1bayesDccGarch3.0.4
bayesdfa1.3.3bayesdistreg0.1.0
bayesDP1.3.6BayesFactor0.9.12-4.7
BayesFM0.1.7bayesforecast1.0.1
bayesGAM0.0.2bayesGARCH2.1.10
BayesGOF5.2BayesGPfit1.1.0
BayesGWQS0.1.1bayesian1.0.1
bayesianETAS1.0.3BayesianFactorZoo0.0.0.3
Bayesiangammareg0.1.0BayesianGLasso0.2.0
BayesianLaterality0.1.2BayesianNetwork0.3.2
BayesianTools0.1.8bayesianVARs0.1.4
bayesImageS0.6-1BayesLCA1.9
bayesLife5.2-0BayesLN0.2.10
BayesLogit2.1bayeslongitudinal0.1.0
bayesm3.1-6BayesMallows2.2.2
BayesMassBal1.1.0bayesmeta3.4
bayesmix0.7-6bayesnec2.1.3.0
bayesplot1.11.1bayesQR2.4
bayesRecon0.3.1bayestestR0.15.0
bayesTFR7.4-2BayesTools0.2.17
BayesTree0.3-1.5BayesVarSel2.2.5
BayesX0.3-3BAYSTAR0.2-10
baytrends2.0.12BB2019.10-1
BBmisc1.13bbmle1.0.25.1
bbotk1.2.0BCBCSF1.0-1
BCC19970.1.1BClustLonG0.1.3
bcpa1.3.2bcrm0.5.4
BDgraph2.73bdrc1.1.0
bdsmatrix1.3-7BE0.2.4
beachmat2.20.0beadarray2.54.0
BeadDataPackR1.56.0beakr0.4.3
bearishTrader1.0.2beastier2.5.2
beautier2.6.12BED1.5.2
beepr2.0beeswarm0.4.0
benchmarkme1.0.8benchmarkmeData1.0.4
BenfordTests1.2.0bentcableAR0.3.1
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TSstudio0.1.7tstests1.0.1
TSTutorial1.2.7tsutils0.9.4
tswge2.1.0tth4.16-0
TTR0.24.4tufterhandout1.2.1
tune1.2.1TUWmodel1.1-1
tvm0.5.2twdtw1.0-1
tweedie2.3.5tweenr2.0.3
twosamples2.0.1TxDb.Hsapiens.UCSC.hg19.knownGene3.2.2
TxDb.Hsapiens.UCSC.hg38.knownGene3.18.0tximport1.32.0
txtq0.2.4tzdb0.4.0
uaparserjs0.3.5ubiquity2.0.3
ucminf1.2.2UComp5.0.4
UCSC.utils1.0.0udpipe0.8.11
ufRisk1.0.7ugatsdb0.2.3
uGMAR3.5.0umap0.2.10.0
uncmbb0.2.2unglue0.1.0
UnifiedDoseFinding0.1.10unifir0.2.4
units0.8-5univOutl0.4
unrepx1.0-2unrtf1.4.7
UpSetR1.4.0uptasticsearch0.4.0
urca1.3-4urlchecker1.0.1
urlshorteneR1.5.7urltools1.7.3
uroot2.1-3usdata0.3.1
usethis3.0.0usmap0.7.1
usmapdata0.3.0utf81.2.4
utility1.4.6uuid1.2-1
uwot0.2.2V86.0.0
VALERIE1.1.0validate1.1.5
validatetools0.5.2valr0.8.2
VAM1.1.0vapour0.10.0
VAR.etp1.1varbvs2.6-10
VARDetect0.1.8vardiag0.2-1
vardpoor0.20.1VaRES1.0.2
vars1.6-1VARshrink0.3.1
varycoef0.3.4VCA1.5.1
vcd1.4-13vcdExtra0.8-5
vcr1.6.0vctrs0.6.5
vdg1.2.3VedicDateTime0.1.9
vegan2.6-8vegawidget0.5.0
vegperiod0.4.0VennDiagram1.7.3
venneuler1.1-4VGAM1.1-12
VGAMdata1.1-12vglmer1.0.5
vhica0.2.8VIC50.2.6
VIM6.2.2VineCopula2.5.1
vines1.1.5vip0.4.1
viridis0.6.5viridisLite0.4.2
visNetwork2.1.2visualize4.5.0
vkR0.2volatilityTrader1.0.1
volcano3D2.0.9volleystat0.2.0
vpc1.2.2vroom1.6.5
vrtest1.2vsn3.72.0
W3CMarkupValidator0.1-7waiter0.2.5
waldo0.5.3warp0.2.1
washdata0.1.4WASP1.4.4
waterData1.0.8waterquality1.0.0
WaveletComp1.1wavelets0.3-0.2
waveslim1.8.5wavethresh4.7.3
wavScalogram1.1.3waywiser0.6.0
wbstats1.0.4wCorr1.9.8
WDI2.7.8wdm0.2.4
wdman0.2.6weatherOz1.0.0
WebAnalytics0.9.12webchem1.3.0
webdriver1.0.6WebGestaltR0.4.6
webmockr1.0.0webreadr0.4.0
webshot0.5.5webshot20.1.1
websocket1.4.2webutils1.2.2
wehoop2.1.0WeightedPortTest1.1
WeightIt1.3.1weights1.0.4
welo0.1.4WeMix4.0.3
WGCNA1.73WH1.1.2
whisker0.4.1whitebox2.4.0
whitening1.4.0whoami1.3.0
widgetframe0.3.1widgetTools1.82.0
WikidataQueryServiceR1.0.0WikidataR2.3.3
WikipediR1.7.1wikitaxa0.4.0
wildlifeDI1.0.0wilson2.4.2
windex2.0.8wINEQ1.2.1
withr3.0.2wk0.9.4
wktmo1.0.5wkutils0.1.3
wnl0.8.1wooldridge1.4-3
worcs0.1.15word2vec0.4.0
wordcloud2.6wordnet0.1-17
workflowr1.7.1workflows1.1.4
workflowsets1.1.0worldfootballR0.6.2
worldmet0.9.8worrms0.4.3
wpp20171.2-3wpp20191.1-1
wql1.0.1WrightMap1.4
writexl1.5.1WriteXLS6.7.0
wrMisc1.15.2wrProteo1.12.0
WRSS3.1wrswoR1.1.1
WRTDStidal1.1.4WufooR1.0.1
x121.10.3x13binary1.1.61
xaringan0.30XBRL0.99.19.1
xfun0.49xgboost1.7.8.1
xgxr1.1.2XLConnect1.1.0
xlsx0.6.5xlsxjars0.6.1
XML3.99-0.17xml21.3.6
XML2R0.0.8xmlrpc21.1
xopen1.0.1xplain0.2.2
xpose0.4.18xpose.nlmixr20.4.0
xpose44.7.3xslt1.4.6
xtable1.8-4xts0.14.1
XVector0.44.0xxIRT2.1.2
yaImpute1.0-34.1yaml2.3.10
yardstick1.3.1yesno0.1.3
yhatr0.15.1ympes1.6.0
yorkr0.0.42ypssc1.1.0
yuima1.15.27yulab.utils0.1.7
zeallot0.1.0zen4R0.10
zic0.9.1ZIM1.1.0
ZINARp0.1.0zip2.3.1
zipfR0.6-70zlib1.0.3
zlibbioc1.50.0zoo1.8-12
ZRA0.2ztable0.2.3
zTree1.0.7zyp0.11-1

After the EC2 instance is started, you can access the RStudio Server with its public IP address. For example, if the IP address is 10.11.12.13, typing http://10.11.12.13 in the browser will bring you to the following startup page:

main page

The default username is ruser and the password is the EC2 instance ID that has the form of i-0c7fadc4dc193eca7.

RStudio Server AMI on AWS Marketplace

Subscribe to the AMI

main page

Continue to configure the EC2 instance

main page

Choose a region close to your location

main page

Choose an instance type

t2.micro is a good starting point for testing. Once everything is confirmed to work, you can switch to other instance types (more CPUs, high memory) that fit your need. main page

Create security group for the Rstudio Server

If you do not already have an SSH key pair, please generate a new one to use when logging into the RStudio Server.

main page

Create SSH key pair with default values

main page

Choose "allow" to download your SSH key pair

main page

Launch your EC2 instance

main page

Go to EC2 console

main page

Select the new EC2 instance

main page

Public IP address and Instance ID

main page

Access the login page

main page

Enter RStudio IDE

main page

Change instance type

To change the instance type once the server is tested, please go to "Actions", "Instance settings", and then "Change instance type".

RStudio Server

    R: 4.4.2

    rstudio-server: 2024.04.2-764

Release Notes

Upgraded R to version 4.4.2, and all R packages to their latest versions.

This AMI provides thousands of R packages covering various domains such as data science, machine learning, economitrics, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, reproducible research, phylogenetics, web technologies, hydrology, sports analytics, natural language processing, actuarial science, optimization, genomics, proteomics, metabolomics, transcriptomics, and other omics.

R packages (4302)

packageversionpackageversion
abc2.2.1abc.data1.1
ABCoptim0.15.0abcrf1.9
abglasso0.1.1abind1.4-8
abtest1.0.1accrualPlot1.0.7
acebayes1.10acepack1.4.2
ACNE0.9.1acp2.1
acs2.1.4ACSWR1.0
ActivePathways2.0.5actuar3.3-4
actuaRE0.1.5ActuarialM0.1.0
actuaryr1.1.1actxps1.5.0
ada2.0-5adagio0.9.2
adaptivetau2.3-2adaptMCMC1.5
adaptr1.4.0ADAPTS1.0.22
adaptsmoFMRI1.2adaptTest1.2
additivityTests1.1-4.2ade41.7-22
ade4TkGUI0.3-1adegenet2.1.10
adegraphics1.0-21adehabitatHR0.4.22
adehabitatHS0.3.18adehabitatLT0.3.28
adehabitatMA0.3.17adephylo1.1-16
adespatial0.3-24ADGofTest0.3
adimpro0.9.7.2adiv2.2.1
adjclust0.6.10adlift1.4-5
admisc0.36AdMit2.1.9
ads1.5-10AdvancedBasketballStats1.0.1
AER1.2-14affy1.82.0
affyio1.74.0africamonitor0.2.4
agricolae1.3-7agricolaeplotr0.5.0
agridat1.24agriwater1.0.2
agvgd0.1.2AhoCorasickTrie0.1.2
aion1.1.0airGR1.7.6
airGRdatasets0.2.1airGRdatassim0.1.3
airGRiwrm0.7.0airGRteaching0.3.3
airports0.1.0airr1.5.0
ajv1.0.0akima0.6-3.4
alabama2023.1.0alakazam1.3.0
aLFQ1.3.6AlgDesign1.2.1.1
aliases2entrez0.1.2almanac1.0.0
alpaca0.3.4alphavantager0.1.3
altair4.2.3ALTopt0.1.2
Amelia1.8.2ammiBayes1.0-2
ampir1.1.0AMR2.1.1
anabel3.0.1AnaCoDa0.1.4.4
anacor1.1-4analogsea1.0.7.2
analogue0.17-7anesrake0.80
animation2.7anipaths0.10.3
anMC0.2.5annotate1.82.0
AnnotationBustR1.3.0AnnotationDbi1.66.0
AnnuityRIR1.0-0Anthropometry1.19
anytime0.3.9ao1.1.0
aod1.3.3aoos0.5.0
AovBay0.1.0apc2.0.0
apcluster1.4.13ape5.8
apex1.0.6APFr1.0.2
aphid1.3.5aphylo0.3-3
apisensr1.0.0aplot0.2.3
apollo0.3.4approximator1.2-8
apsimx2.8.0ARCensReg3.0.1
arcgislayers0.3.1arcgisutils0.3.1
archetypes2.2-0.1archive1.1.9
archivist2.3.8arcpbf0.1.6
ArDec2.1-1ARDL0.2.4
ardl.nardl1.3.0areal0.1.8
arfima1.8-1argo3.0.2
argparse2.2.3arima23.3.0
arkhe1.7.0arm1.14-4
aroma.affymetrix3.2.2aroma.apd0.7.0
aroma.cn1.7.1aroma.core3.3.1
aroma.light3.34.0arpr0.1.2
arrangements1.1.9arrow17.0.0.1
ars0.8arsenal3.6.3
aRxiv0.10ascii2.6
asd2.2ash1.0-15
ashr2.2-63AsioHeaders1.22.1-2
askpass1.2.1aspect1.0-6
ASSA2.0assertthat0.2.1
AssetCorr1.0.4astsa2.1
asymmetry2.0.4ata1.1.1
atom4R0.3-3atRisk0.1.0
attempt0.3.1attention0.4.0
AUC0.3.2audio0.1-11
autoFRK1.4.3autoimage2.2.3
automap1.1-12autostsm3.1.5
av0.9.2aweek1.0.3
aws2.5-6aws.signature0.6.0
awsMethods1.1-1AzureAppInsights0.3.1
AzureAuth1.3.3AzureCognitive1.0.1
AzureContainers1.3.2AzureCosmosR1.0.0
AzureGraph1.3.4AzureKusto1.1.3
AzureQstor1.0.1AzureRMR2.4.4
AzureStor3.7.0AzureTableStor1.0.0
AzureVision1.0.2AzureVM2.2.2
babelgene22.9babelwhale1.2.0
babette2.3.4BACCO2.1-0
BACCT1.0backports1.5.0
backtest0.3-4bacondecomp0.1.1
baggr0.7.8bain0.2.11
BalancedSampling2.0.6BaM1.0.3
bama1.3.0bamdit3.4.2
bamlss1.2-5BAMMtools2.1.12
bang1.0.4BANOVA1.2.1
BarcodingR1.0-3BART2.9.9
bartCause1.0-9bartcs1.2.2
bartMachine1.3.4.1bartMachineJARs1.2.1
BAS1.7.3basad0.3.0
base642.0.2base64enc0.1-3
base64url1.4baseballr1.6.0
basicMCMCplots0.2.7BASiNET0.0.5
BaSkePro1.1.1BasketballAnalyzeR0.5.0
BASS1.3.1BatchExperiments1.4.3
BatchJobs1.9batchmeans1.0-4
BAwiR1.3.2baycn1.2.0
bayefdr0.2.1bayes4psy1.2.12
bayesAB1.1.3bayesammi0.2.0
bayesanova1.6BayesARIMAX0.1.1
BayesBinMix1.4.1bayesbio1.0.0
bayesboot0.2.2BayesBP1.1
BayesCACE1.2.3BayesCombo1.0
BayesComm0.1-2bayescopulareg0.1.3
bayescount0.9.99-9BayesCR2.1
bayesCT0.99.3BayesCTDesign0.6.1
BayesDA2012.04-1bayesDccGarch3.0.4
bayesdfa1.3.3bayesdistreg0.1.0
bayesDP1.3.6BayesFactor0.9.12-4.7
BayesFM0.1.7bayesforecast1.0.1
bayesGAM0.0.2bayesGARCH2.1.10
BayesGOF5.2BayesGPfit1.1.0
BayesGWQS0.1.1bayesian1.0.1
bayesianETAS1.0.3BayesianFactorZoo0.0.0.3
Bayesiangammareg0.1.0BayesianGLasso0.2.0
BayesianLaterality0.1.2BayesianNetwork0.3.2
BayesianTools0.1.8bayesianVARs0.1.4
bayesImageS0.6-1BayesLCA1.9
bayesLife5.2-0BayesLN0.2.10
BayesLogit2.1bayeslongitudinal0.1.0
bayesm3.1-6BayesMallows2.2.2
BayesMassBal1.1.0bayesmeta3.4
bayesmix0.7-6bayesnec2.1.3.0
bayesplot1.11.1bayesQR2.4
bayesRecon0.3.1bayestestR0.15.0
bayesTFR7.4-2BayesTools0.2.17
BayesTree0.3-1.5BayesVarSel2.2.5
BayesX0.3-3BAYSTAR0.2-10
baytrends2.0.12BB2019.10-1
BBmisc1.13bbmle1.0.25.1
bbotk1.2.0BCBCSF1.0-1
BCC19970.1.1BClustLonG0.1.3
bcpa1.3.2bcrm0.5.4
BDgraph2.73bdrc1.1.0
bdsmatrix1.3-7BE0.2.4
beachmat2.20.0beadarray2.54.0
BeadDataPackR1.56.0beakr0.4.3
bearishTrader1.0.2beastier2.5.2
beautier2.6.12BED1.5.2
beepr2.0beeswarm0.4.0
benchmarkme1.0.8benchmarkmeData1.0.4
BenfordTests1.2.0bentcableAR0.3.1
Bergm5.0.7Bernadette1.1.5
berryFunctions1.22.5Bessel0.6-1
BetaBit2.2betafunctions1.9.0
betapart1.6betareg3.2-1
betategarch3.3BETS0.4.9
bets.covid191.0.0beyondWhittle1.2.1
bezier1.1.2bfast1.7.0
BGLR1.1.3BGVAR2.5.8
bgw0.1.3BH1.84.0-0
BHH22016.05.31BiasCorrector0.2.3
BiasedUrn2.0.12bibtex0.5.1
biclust2.0.3.1bidask2.0.6
bife0.7.2BIFIEsurvey3.6-6
biganalytics1.1.22bigchess1.9.1
bigD0.2.0bigleaf0.8.2
biglm0.9-3bigmemory4.6.4
bigmemory.sri0.1.8bigrquery1.5.1
bigsplines1.1-1bigtime0.2.3
BigVAR1.1.2bimets4.0.2
bindr0.1.1bindrcpp0.2.3
binhf1.0-3binman0.1.3
binom1.1-1.1binr1.1.1
binseqtest1.0.4bio3d2.4-5
Biobase2.64.0BiocFileCache2.12.0
BiocGenerics0.50.0BiocIO1.14.0
BiocManager1.30.25BiocParallel1.38.0
BiocSingular1.20.0BiocVersion3.19.1
BioInsight0.3.1biomaRt2.60.1
biomartr1.0.7biomformat1.32.0
bioseq0.1.4Biostrings2.72.1
biotic0.1.2bipartite2.20
birtr1.0.0BisqueRNA1.0.5
bit4.5.0bit644.5.2
bitops1.0-9biwavelet0.20.22
bizdays1.0.16bkmr0.2.2
blaise1.3.11blastula0.3.5
blavaan0.5-6blink1.1.0
BLModel1.0.2blob1.2.4
blocklength0.1.5blockmatrix1.0
blockrand1.5blocksdesign4.9
blockTools0.6.5blogdown1.19
BLR1.6BLRPM1.0
BMA3.18.19bmgarch2.0.0
BMisc1.4.6bmixture1.7
BMS0.3.5BMTAR0.1.1
bnlearn5.0.1BNPTSclust2.0
BNSP2.2.3bnstruct1.0.15
boa1.1.8-2boilerpipeR1.3.2
BOIN2.7.2boiwsa1.1.2
bold1.3.0Bolstad0.2-41
Bolstad21.0-29bondAnalyst1.0.1
bookdown0.41Boom0.9.15
BoomSpikeSlab1.2.6bootnet1.6
BootPR1.0bootstrap2019.6
bootUR1.0.4BoSSA3.7
boussinesq1.0.6boxr0.3.6
bpca1.3-6bqtl1.0-38
BradleyTerry21.1-2brainR1.6.0
brandwatchR0.3.0breakfast2.5
brew1.0-10brglm0.7.2
brglm20.9.2bridgesampling1.1-2
BRINDA0.1.5brio1.1.5
brms2.22.0Brobdingnag1.2-9
broman0.84broom1.0.7
broom.helpers1.17.0brotli1.3.1
bsam1.1.3bsamGP1.2.5
BSgenome1.72.0bsicons0.1.2
bslib0.8.0BsMD2023.920
bspec1.6bspmma0.1-2
bssm2.0.2BSSprep0.1
bsts0.9.10bsvars3.2
bsvarSIGNs1.0.1BTLLasso0.1-13
BTM0.3.7bullishTrader1.0.1
bundesbank0.1-12BurStFin1.3
BurStMisc1.1BVAR1.0.5
bvarsv1.1bvartools0.2.4
bvls1.4C500.1.8
ca0.71.1cabinets0.6.0
cabootcrs2.1.0cachem1.1.0
cacIRT1.4CADFtest0.3-3
caffsim0.2.2Cairo1.6-2
CALANGO1.0.20calculus1.0.1
calibrar0.9.0calibrate1.7.7
CalibrateSSB1.3.0calibrator1.2-8
callr3.7.6cancensus0.5.7
candisc0.9.0CANSIM2R1.14.1
caper1.0.3captr0.3.0
capushe1.1.2car3.1-3
caRamel1.4CARBayes6.1.1
CARBayesdata3.0CARBayesST4.0
carData3.0-5cards0.3.0
caret6.0-94carfima2.0.2
caribou1.1-1carrier0.1.1
cartogram0.3.0Cascade2.1
CascadeData1.4CAST1.0.2
castor1.8.2CatDataAnalysis0.1-5
caTools1.18.3catR3.17
causact0.5.5CausalImpact1.3.0
CAvariants6.0CB21.3.4
cbioportalR1.1.0cbsodataR1.1
ccaPP0.3.4cccp0.3-1
cdlTools1.13CDM8.2-6
cds1.0.3CellNOptR1.50.0
cellranger1.1.0censReg0.5-38
censusapi0.8.0CEoptim1.3
CePa0.8.1CeRNASeek2.1.3
cffr1.1.1cfr0.1.2
CFtime1.4.1ChainLadder0.2.19
chandwich1.1.6changepoint2.2.4
changepoint.geo1.0.2changepoint.np1.0.5
checkLuhn1.1.0checkmate2.3.2
checkpoint1.0.2ChemoSpec6.1.10
ChemoSpecUtils1.0.4cherryblossom0.1.0
chess1.0.1chilemapas0.3.0
chk0.9.2choiceDes0.9-3
cholera0.8.0CholWishart1.1.4
choroplethr3.7.3choroplethrMaps1.0.1
chromoMap4.1.1chromote0.3.1
chron2.3-61cifti0.4.5
cinterpolate1.0.2circlize0.4.16
CircSpaceTime0.9.0CircStats0.2-6
circular0.5-1ciTools0.6.1
Ckmeans.1d.dp4.3.5Claddis0.7.0
clarabel0.9.0.1clarifai0.4.2
classInt0.4-10cleanepi1.0.2
clevr0.1.2cli3.6.3
clifro3.2-5climatol4.1.0
clime0.5.0clinDR2.4.1
clinfun1.1.5clinicalsignificance2.0.0
clinPK0.13.0clinsig1.2
clipr0.8.0clisymbols1.2.0
clmplus1.0.0clock0.7.1
clubSandwich0.5.11clue0.3-65
clusterGeneration1.3.8clustermole1.1.1
clusterProfiler4.12.6clusterSEs2.6.5
clustMixType0.4-2ClustVarLV2.1.1
clv0.3-2.4cmaes1.0-12
cmaesr1.0.3CMLS1.0-1
cmm1.0cmocean0.3-2
cmprsk2.2-12cmrutils1.3.1
CNLTreg0.1-2CNLTtsa0.1-2
cNORM3.3.1CNORode1.46.0
coalescentMCMC0.4-4coarseDataTools0.6-6
cobalt4.5.5cobs1.3-8
coconots1.1.3COCONUT1.0.2
cocor1.1-4cocorresp0.4-5
cocron1.0-1coda0.19-4.1
codebook0.9.5codebookr0.1.8
coin1.4-3cointReg0.2.0
colf0.1.3collapse2.0.16
collapsibleTree0.1.8collections0.3.7
colorr1.0.0colorRamps2.3.4
colorspace2.1-1colourpicker1.3.0
colourvalues0.3.9combinat0.0-8
combinedevents0.1.1CombinS1.1-1
ComICS1.0.4CommonJavaJars1.1-0
commonmark1.9.2compare0.2-6
compas0.1.1complex1.0.0
ComplexHeatmap2.20.0CompQuadForm1.4.3
comprehenr0.6.10conditionz0.1.0
coneproj1.19conf.design2.0.0
config0.3.2confintr1.0.2
conflicted1.2.0conos1.5.2
conquer1.3.3conquestr1.3.4
constrainedKriging0.2-8contactdata1.1.0
contfrac1.1-12ContourFunctions0.1.2
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coop0.6-3cops1.12-1
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sem3.1-16semantic.assets1.1.0
semds0.9-6SemiPar1.0-4.2
semmcmc0.0.6semPlot1.1.6
SEMsens1.5.5semsfa1.1
semTools0.5-6semtree0.9.20
semver0.2.0sendmailR1.4-0
SensoMineR1.27sentencepiece0.2.3
sentiment.ai0.1.1sentometrics1.0.0
separationplot1.4seqDesign1.2
seqgendiff1.2.4seqinr4.2-36
SeqNet1.1.3SequenceSpikeSlab1.0.1
seriation1.5.6servr0.32
sessioninfo1.2.2setartree0.2.1
setRNG2024.2-1sets1.0-25
settings0.2.7Seurat5.1.0
SeuratObject5.0.2sf1.0-18
sfd0.1.0sFFLHD0.1.2
sfheaders0.4.4sfsmisc1.1-19
sftime0.3.0sgeostat1.0-27
shades1.4.0shadowtext0.1.4
shape1.4.6.1shapefiles0.7.2
shapes1.2.7SharpeR1.3.0
shazam1.2.0ShiftConvolvePoibin1.0.0
shiny1.9.1shiny.semantic0.5.1
shinyAce0.4.3shinyalert3.1.0
shinybrms1.8.0shinyBS0.61.1
shinybusy0.3.3shinycssloaders1.1.0
shinydashboard0.7.2shinydashboardPlus2.0.5
shinyFiles0.9.3ShinyItemAnalysis1.5.1
shinyjs2.1.0shinymaterial1.2.0
shinystan2.6.0shinythemes1.2.0
shinyTree0.3.1shinyWidgets0.8.7
showimage1.0.0showtext0.9-7
showtextdb3.0shrinkTVP3.0.1
SIBERG2.0.3sigminer2.3.1
sigmoid1.4.0Signac1.14.0
SignacX2.2.5signal1.8-1
signs0.1.2sigora3.1.1
SigTree1.10.6Sim.DiffProc4.9
simcdm0.1.2SimComp3.3
SimDesign2.17.1simex1.8
simfinapi1.0.0simglm0.8.9
SimilarityMeasures1.4SimInf9.8.1
SIMMS1.3.2SimMultiCorrData0.2.2
simpleboot1.1-8simPop2.1.3
simputation0.2.8simrel2.1.0
SiMRiv1.0.7simsem0.5-16
SimSurvey0.1.6SingleCellExperiment1.26.0
singleCellHaystack1.0.2singleRcapture0.2.1.2
singscore1.24.0siplab1.6
sirt4.1-15sitmo2.0.2
sits1.5.1sjlabelled1.2.0
SkewHyperbolic0.4-2skimr2.1.5
skmeans0.2-17skpr1.7.1
slackr3.3.1slam0.1-54
SlaPMEG1.0.1SLBDD0.0.4
slcm0.1.0sleekts1.0.2
sleeperapi1.1.1Sleuth22.0-7
Sleuth31.0-6slfm1.0.2
SLHD2.1-1slider0.3.2
slippymath0.3.1sm2.2-6.0
smacof2.1-7smacofx1.6-1
smacpod2.6.4SmallCountRounding1.0.8
smam0.7.2SmCCNet2.0.3
SMDIC0.1.6smerc1.8.4
smoof1.6.0.3smooth4.1.0
smoothr1.0.1smoots1.1.4
smovie1.1.6SMPracticals1.4-3.1
sms2.3.1SMVar1.3.4
sn2.1.1sna2.8
snakecase0.11.1snow0.4-4
SnowballC0.7.1snowfall1.84-6.3
snpStats1.54.0snvecR3.9.4
SOAs1.4soc.ca0.8.0
socceR0.1.1socialmixr0.4.0
sodium1.3.2sofa0.4.0
SoilHyP0.1.7soilhypfit0.1-7
soilwater1.0.5solaR0.46
solartime0.0.2solrium1.2.0
solvebio2.15.0soma1.2.0
sonicLength1.4.7sorvi0.8.21
SoupX1.6.2sourcetools0.1.7-1
sp2.1-4sp23design0.9-1
spacefillr0.3.3spacetime1.3-2
spam2.11-0spam642.10-0
spaMM4.5.0spant2.23.0
sparklyr1.8.6sparktex0.1
sparr2.3-15SparseArray1.4.8
sparseDFM1.0sparseinv0.1.3
SparseM1.84-2sparseMatrixStats1.16.0
sparseMVN0.2.2sparsevar0.1.0
spatgraphs3.4spatialCovariance0.6-9
SpatialEpi1.2.8SpatialExperiment1.14.0
SpatialExtremes2.1-0SpatialPosition2.1.2
spatialprobit1.0.4spatialreg1.3-5
spatialsample0.6.0SpatialTools1.0.5
spatialwidget0.2.5spatstat3.2-1
spatstat.data3.1-2spatstat.explore3.3-3
spatstat.geom3.3-3spatstat.linnet3.2-2
spatstat.model3.3-2spatstat.random3.3-2
spatstat.sparse3.1-0spatstat.univar3.0-1
spatstat.utils3.1-0spBayes0.4-8
spBayesSurv1.1.8Spbsampling1.3.5
spd2.0-1spData2.3.3
spdep1.3-6spec0.1.9
spectral2.0speff2trial1.0.5
SPEI1.8.1spelling2.3.1
sperrorest3.0.5sphet2.0
spiderbar0.2.5spikeslab1.1.6
spikeSlabGAM1.1-20spINAR0.2.0
spind2.2.1splancs2.01-45
SPLICE1.1.2splines20.5.3
splitstackshape1.4.8splm1.6-5
spls2.2-3splus2R1.3-5
spmodel0.8.0spmoran0.3.1
SportsTour0.1.0sportyR2.2.2
sps0.5.4spselect0.0.1
spsur1.0.2.5spsurvey5.5.1
spTimer3.3.3sptotal1.0.1
sqldf0.4-11SqlRender1.19.0
SQRL1.0.2SQUAREM2021.1
srvyr1.3.0ssanv1.1
SSBtools1.5.5ssfa1.2.2
ssgraph1.15ssize.fdr1.3
ssizeRNA1.3.2ssMousetrack1.1.6
ssmrob1.0SSN20.2.1
sstvars1.0.1stable1.1.6
stabledist0.7-2stabs0.6-4
staggered1.2.1stampr0.3.1
StanHeaders2.32.10StanMoMo1.2.0
stargazer5.2.3starma1.3
stars0.6-6starter0.1.16
STARTS1.3-8startupmsg0.9.7
statcanR0.2.6statcodelists0.9.2
statcomp0.1.0statebins1.4.0
statespacer0.5.0stationaRy0.5.1
statip0.2.3StatMatch1.4.2
statmod1.5.0statnet.common4.10.0
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steadyICA1.0SteinIV0.1-1
STFTS0.1.0stinepack1.5
stlplus0.5.1stm1.3.7
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stochvol3.2.5stockAnalyst1.0.1
stops1.8-2stopwords2.3
storr1.2.5stplanr1.2.2
stR0.7strand0.2.0
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streamDepletr0.2.0streamR0.4.5
stringdist0.9.12stringfish0.16.0
stringi1.8.4stringmagic1.1.2
stringr1.5.1strucchange1.5-4
strucchangeRcpp1.5-4-1.0.0StructuralDecompose0.1.1
styler1.10.3subplex1.9
subscore3.3sufficientForecasting0.1.0
sugrrants0.2.9SummarizedExperiment1.34.0
SUMMER1.4.0suntools1.0.0
supclust1.1-1SuperLearner2.0-29
superml0.5.7superpc1.12
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surface0.6SurrogateRegression0.6.0.1
suRtex0.9survcomp1.54.0
surveillance1.24.0survey4.4-2
surveybootstrap0.0.3surveydata0.2.7
surveyplanning4.0surveysd1.3.1
survival6660.5survivalROC1.0.3.1
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survPresmooth1.1-11sva3.52.0
svars1.3.11svd0.5.7
svDialogs1.1.0SVDNF0.1.11
svglite2.1.3svGUI1.0.1
svrep0.6.4svs3.1.1
svUnit1.0.6swagger5.17.14.1
sweep0.2.5swephR0.3.1
SwimmeR0.14.2swirl2.4.5
swirlify0.5.3switchr0.14.8
SWTools1.1.0sylly0.1-6
sym.arma1.0symengine0.2.6
symmoments1.2.1synchronicity1.3.10
SYNCSA1.3.4Synth1.1-8
synthACS1.7.1synthesis1.2.5
SynthETIC1.1.0synthpop1.8-0
sys3.4.3sysfonts0.8.9
systemfit1.1-30systemfonts1.1.0
table11.4.3tables0.9.31
tabnet0.6.0tabuSearch1.1.1
TAF4.2.0tagcloud0.6
TailRank3.2.2TAM4.2-21
tanaka0.4.0TAQMNGR2018.5-1
targets1.8.0tau0.0-26
taxize0.9.100tbea1.5.0
TBRDist1.0.2tbrf0.1.5
TCA1.2.1TCGAbiolinks2.32.0
TCGAbiolinksGUI.data1.24.0TCGAretriever1.9.1
TcGSA0.12.10tcltk21.2-11
Tcomp1.0.1tdigest0.4.2
TeachingDemos2.13teamcolors0.0.4
telegram.bot3.0.0tempdisagg1.1.1
tensor1.5tensorA0.36.2.1
tensorflow2.16.0tensorMiss1.1.1
TensorPreAve1.1.0tensorTS1.0.2
TEQR6.0-0tergm4.2.1
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terrainr0.7.5TESS2.1.2
tesseract5.2.2testcorr0.2.0
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tester0.2.0TestFunctions0.2.2
testit0.13TestScorer1.7.2
testthat3.2.1.1TexExamRandomizer1.2.7
texreg1.39.4text2vec0.6.4
textcat1.0-8textir2.0-5
textplot0.2.2textrank0.3.1
textreuse0.1.5textshaping0.4.0
textTinyR1.1.8textutils0.4-1
tfarima0.3.2tfautograph0.3.2
tfdatasets2.17.0tfhub0.8.1
tfio0.4.1TFisher0.2.0
tframe2015.12-1.1tfruns1.5.3
tgp2.4-23TGS1.0.1
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thief0.3ThreeGroups0.21
threejs0.3.3ThreeWay1.1.3
thurstonianIRT0.12.5tibble3.2.1
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tidycensus1.6.7tidyestimate1.1.1
tidygraph1.3.1tidyhydat0.7.0
tidyLPA1.1.0tidymodels1.2.0
tidyquant1.0.9tidyr1.3.1
tidyREDCap1.1.2tidyRSS2.0.7
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timeDate4041.110timeless0.2.3
timeSeries4041.111timeseriesdb1.0.0-1.1.2
timetk2.9.0timsac1.3.8-4
tinyarray2.4.2tinyProject0.6.1
tinytable0.5.0tinytex0.53
tis1.39tkrplot0.0-27
tkWidgets1.82.0TLMoments0.7.5.3
tm0.7-14tm.plugin.alceste1.1.1
tm.plugin.dc0.2-10tm.plugin.europresse1.4
tm.plugin.factiva1.8tm.plugin.lexisnexis1.4.1
tm.plugin.mail0.3-1tmap3.3-4
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tmvnsim1.0-2tmvtnorm1.6
tnet3.0.16tokenizers0.3.0
tokenizers.bpe0.1.3topicdoc0.1.1
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torchaudio0.3.1.9000torchdatasets0.3.1
torchvision0.6.0tpr0.3-3
tracerer2.2.3trackdem0.7.2
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trackeR1.6.0trackeRapp1.2
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traipse0.3.0trajectories0.2-9
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transformr0.1.5transfR1.0.11
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traudem1.0.3tree1.0-43
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treeio1.28.0treemap2.4-4
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treespace1.1.4.3TreeTools1.12.0
trend1.1.6trendeval0.1.0
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triangle1.0triebeard0.4.1
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tripack1.3-9.2tripEstimation0.0-46
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trustOptim0.8.7.3tryCatchLog1.3.1
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tsbox0.4.2tsBSS1.0.0
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tscount1.4.3tsdataleaks2.1.1
tsdb1.1-0tsdecomp0.2
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TSdisaggregation2.0.0TSdist3.7.1
tsdistributions1.0.2tsDyn11.0.5.2
TSEAL0.1.3TSEntropies0.9
tseries0.10-58tseriesChaos0.1-13.1
tseriesEntropy0.7-2tseriesTARMA0.5-1
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tsintermittent1.10tsiR0.4.3
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tsne0.1-3.1tsnet0.1.0
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tsPI1.0.4TSrepr1.1.0
tsrobprep0.3.2tssim0.1.7
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tswge2.1.0tth4.16-0
TTR0.24.4tufterhandout1.2.1
tune1.2.1TUWmodel1.1-1
tvm0.5.2twdtw1.0-1
tweedie2.3.5tweenr2.0.3
twosamples2.0.1TxDb.Hsapiens.UCSC.hg19.knownGene3.2.2
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txtq0.2.4tzdb0.4.0
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uGMAR3.5.0umap0.2.10.0
uncmbb0.2.2unglue0.1.0
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urca1.3-4urlchecker1.0.1
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uroot2.1-3usdata0.3.1
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utility1.4.6uuid1.2-1
uwot0.2.2V86.0.0
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VAM1.1.0vapour0.10.0
VAR.etp1.1varbvs2.6-10
VARDetect0.1.8vardiag0.2-1
vardpoor0.20.1VaRES1.0.2
vars1.6-1VARshrink0.3.1
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vcd1.4-13vcdExtra0.8-5
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vdg1.2.3VedicDateTime0.1.9
vegan2.6-8vegawidget0.5.0
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venneuler1.1-4VGAM1.1-12
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vhica0.2.8VIC50.2.6
VIM6.2.2VineCopula2.5.1
vines1.1.5vip0.4.1
viridis0.6.5viridisLite0.4.2
visNetwork2.1.2visualize4.5.0
vkR0.2volatilityTrader1.0.1
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vpc1.2.2vroom1.6.5
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waldo0.5.3warp0.2.1
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wbstats1.0.4wCorr1.9.8
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webshot0.5.5webshot20.1.1
websocket1.4.2webutils1.2.2
wehoop2.1.0WeightedPortTest1.1
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welo0.1.4WeMix4.0.3
WGCNA1.73WH1.1.2
whisker0.4.1whitebox2.4.0
whitening1.4.0whoami1.3.0
widgetframe0.3.1widgetTools1.82.0
WikidataQueryServiceR1.0.0WikidataR2.3.3
WikipediR1.7.1wikitaxa0.4.0
wildlifeDI1.0.0wilson2.4.2
windex2.0.8wINEQ1.2.1
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workflowsets1.1.0worldfootballR0.6.2
worldmet0.9.8worrms0.4.3
wpp20171.2-3wpp20191.1-1
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wrMisc1.15.2wrProteo1.12.0
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zic0.9.1ZIM1.1.0
ZINARp0.1.0zip2.3.1
zipfR0.6-70zlib1.0.3
zlibbioc1.50.0zoo1.8-12
ZRA0.2ztable0.2.3
zTree1.0.7zyp0.11-1

RStudio Server

R: 4.4.1

rstudio-server: 2024.04.2-764

Release Notes

Since RStudio v1.3, the default authentication timeout configuration was changed to address security concerns about session hijacking, as users could remain signed in for extended periods. The new default automatically signs users out after 60 minutes of inactivity (no interaction with the IDE). This change impacts long-running code that is not started as a background job. To accommodate user preferences, the legacy behavior has been restored, allowing users to stay signed in for several days without being forced to log in again after going idle.

This AMI provides thousands of R packages covering various domains such as data science, machine learning, economitrics, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, reproducible research, phylogenetics, web technologies, hydrology, sports analytics, natural language processing, actuarial science, optimization, genomics, proteomics, metabolomics, transcriptomics, and other omics.

R packages (4293)

packageversionpackageversion
abc2.2.1abc.data1.1
ABCoptim0.15.0abcrf1.9
abglasso0.1.1abind1.4-5
abtest1.0.1accrualPlot1.0.7
acebayes1.10acepack1.4.2
ACNE0.9.1acp2.1
acs2.1.4ACSWR1.0
ActivePathways2.0.5actuar3.3-4
actuaRE0.1.5ActuarialM0.1.0
actuaryr1.1.1actxps1.5.0
ada2.0-5adagio0.9.2
adaptivetau2.3-1adaptMCMC1.5
adaptr1.4.0ADAPTS1.0.22
adaptsmoFMRI1.2adaptTest1.2
additivityTests1.1-4.2ade41.7-22
ade4TkGUI0.3-1adegenet2.1.10
adegraphics1.0-21adehabitatHR0.4.21
adehabitatHS0.3.17adehabitatLT0.3.27
adehabitatMA0.3.16adephylo1.1-16
adespatial0.3-23ADGofTest0.3
adimpro0.9.7adiv2.2.1
adjclust0.6.9adlift1.4-5
admisc0.35AdMit2.1.9
ads1.5-10AdvancedBasketballStats1.0.1
AER1.2-12affy1.82.0
affyio1.74.0africamonitor0.2.4
agricolae1.3-7agricolaeplotr0.5.0
agridat1.23agriwater1.0.2
agvgd0.1.2AhoCorasickTrie0.1.2
aion1.0.4airGR1.7.6
airGRdatasets0.2.1airGRdatassim0.1.3
airGRiwrm0.6.2airGRteaching0.3.3
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ajv1.0.0akima0.6-3.4
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table11.4.3tables0.9.28
tabnet0.6.0tabuSearch1.1.1
TAF4.2.0tagcloud0.6
TailRank3.2.2TAM4.2-21
tanaka0.4.0TAQMNGR2018.5-1
targets1.7.1tau0.0-25
taxize0.9.100tbea1.5.0
TBRDist1.0.2tbrf0.1.5
TCA1.2.1TCGAbiolinks2.32.0
TCGAbiolinksGUI.data1.24.0TCGAretriever1.9.1
TcGSA0.12.10tcltk21.2-11
Tcomp1.0.1tdigest0.4.2
TeachingDemos2.13teamcolors0.0.4
telegram.bot3.0.0tempdisagg1.1.1
tensor1.5tensorA0.36.2.1
tensorflow2.16.0tensorMiss1.1.1
TensorPreAve1.1.0tensorTS1.0.2
TEQR6.0-0tergm4.2.0
Ternary2.3.2terra1.7-78
terrainr0.7.5TESS2.1.2
tesseract5.2.1testcorr0.2.0
TestDataImputation2.3TestDesign1.6.1
tester0.2.0TestFunctions0.2.1
testit0.13TestScorer1.7.2
testthat3.2.1.1TexExamRandomizer1.2.7
texreg1.39.4text2vec0.6.4
textcat1.0-8textir2.0-5
textplot0.2.2textrank0.3.1
textreuse0.1.5textshaping0.4.0
textTinyR1.1.8textutils0.4-1
tfarima0.3.2tfautograph0.3.2
tfdatasets2.17.0tfhub0.8.1
tfio0.4.1TFisher0.2.0
tframe2015.12-1.1tfruns1.5.3
tgp2.4-22TGS1.0.1
TH.data1.1-2theft0.6.1
thief0.3ThreeGroups0.21
threejs0.3.3ThreeWay1.1.3
thurstonianIRT0.12.5tibble3.2.1
tibbletime0.1.8tictoc1.2.1
Tides2.1tidyBdE0.3.6
tidycensus1.6.5tidyestimate1.1.1
tidygraph1.3.1tidyhydat0.6.1
tidyLPA1.1.0tidymodels1.2.0
tidyquant1.0.7tidyr1.3.1
tidyREDCap1.1.1tidyRSS2.0.7
tidyselect1.2.1tidySEM0.2.7
tidysynth0.2.0tidyterra0.6.1
tidytext0.4.2tidytree0.4.6
tidyverse2.0.0tidyvpc1.5.1
tiff0.1-12tigris2.1
tikzDevice0.12.6timechange0.3.0
timeDate4032.109timeless0.2.3
timeSeries4032.109timeseriesdb1.0.0-1.1.2
timetk2.9.0timsac1.3.8-4
tinyarray2.4.2tinyProject0.6.1
tinytable0.3.0tinytex0.52
tis1.39tkrplot0.0-27
tkWidgets1.82.0TLMoments0.7.5.3
tm0.7-14tm.plugin.alceste1.1.1
tm.plugin.dc0.2-10tm.plugin.europresse1.4
tm.plugin.factiva1.8tm.plugin.lexisnexis1.4.1
tm.plugin.mail0.3-0tmap3.3-4
tmaptools3.1-1TMB1.9.14
Tmisc1.0.1tmod0.50.13
tmvnsim1.0-2tmvtnorm1.6
tnet3.0.16tokenizers0.3.0
tokenizers.bpe0.1.3topicdoc0.1.1
topicmodels0.2-17topicmodels.etm0.1.0
topmodel0.7.5topologyGSA1.5.0
toprdata1.0.2torch0.13.0
torchaudio0.3.1.9000torchdatasets0.3.1
torchvision0.6.0tpr0.3-3
tracerer2.2.3trackdem0.7.2
trackdf0.3.3trackdown1.1.1
trackeR1.6.0trackeRapp1.2
TrackReconstruction1.3tractor.base3.4.2
traipse0.3.0trajectories0.2-8
TrajectoryUtils1.12.0trajr1.5.1
transformr0.1.5transfR1.0.11
TransPhylo1.4.5trapezoid2.0-2
traudem1.0.3tree1.0-43
treebalance1.2.0treebase0.1.5
TreeBUGS1.5.0treedater0.5.0
TreeDist2.8.0treefit1.0.2
treeio1.28.0treemap2.4-4
TreeSearch1.5.1TreeSim2.4
treespace1.1.4.3TreeTools1.12.0
trend1.1.6trendeval0.1.0
trending0.1.0TrialSize1.4
triangle1.0triebeard0.4.1
trimcluster0.1-5trip1.10.0
tripack1.3-9.1tripEstimation0.0-46
TripleR1.5.4TruncatedNormal2.3
truncdist1.0-2truncnorm1.0-9
truncreg0.2-5trust0.1-8
trustOptim0.8.7.3tryCatchLog1.3.1
TSA1.3.1TSANN0.1.0
tsbox0.4.1tsBSS1.0.0
TSCAN1.42.0TSclust1.3.1
tscount1.4.3tsdataleaks2.1.1
tsdb1.1-0tsdecomp0.2
TSdeeplearning0.1.0tsdisagg20.1.0
TSdisaggregation2.0.0TSdist3.7.1
tsdistributions1.0.1tsDyn11.0.4.1
TSEAL0.1.3TSEntropies0.9
tseries0.10-57tseriesChaos0.1-13.1
tseriesEntropy0.7-2tseriesTARMA0.3-4
tsfeatures1.1.1tsfknn0.6.0
tsgarch1.0.2tsibble1.1.5
tsibbledata0.4.1tsibbletalk0.1.0
tsintermittent1.10tsiR0.4.3
TSLSTM0.1.0TSLSTMplus1.0.4
tsmethods1.0.1tsModel0.6-2
tsne0.1-3.1tsnet0.1.0
tsoutliers0.6-10TSP1.2-4
tsPI1.0.4TSrepr1.1.0
tsrobprep0.3.2tssim0.1.7
TSstudio0.1.7tstests1.0.0
TSTutorial1.2.7tsutils0.9.4
tswge2.1.0tth4.16-0
TTR0.24.4tufterhandout1.2.1
tune1.2.1TUWmodel1.1-1
tvm0.5.2twdtw1.0-1
tweedie2.3.5tweenr2.0.3
twosamples2.0.1TxDb.Hsapiens.UCSC.hg19.knownGene3.2.2
TxDb.Hsapiens.UCSC.hg38.knownGene3.18.0tximport1.32.0
txtq0.2.4tzdb0.4.0
uaparserjs0.3.5ubiquity2.0.3
ucminf1.2.2UComp5.0.4
UCSC.utils1.0.0udpipe0.8.11
ufRisk1.0.7ugatsdb0.2.3
uGMAR3.5.0umap0.2.10.0
uncmbb0.2.2unglue0.1.0
UnifiedDoseFinding0.1.10unifir0.2.4
units0.8-5univOutl0.4
unrepx1.0-2unrtf1.4.5
UpSetR1.4.0uptasticsearch0.4.0
urca1.3-4urlchecker1.0.1
urlshorteneR1.5.7urltools1.7.3
uroot2.1-3usdata0.3.1
usethis3.0.0usmap0.7.1
usmapdata0.3.0utf81.2.4
utility1.4.6uuid1.2-1
uwot0.2.2V84.4.2
VALERIE1.1.0validate1.1.5
validatetools0.5.2valr0.8.1
VAM1.1.0vapour0.10.0
VAR.etp1.1varbvs2.6-10
VARDetect0.1.8vardiag0.2-1
vardpoor0.20.1VaRES1.0.2
vars1.6-1VARshrink0.3.1
varycoef0.3.4VCA1.5.1
vcd1.4-12vcdExtra0.8-5
vcr1.6.0vctrs0.6.5
vdg1.2.3VedicDateTime0.1.9
vegan2.6-6.1vegawidget0.5.0
vegperiod0.4.0VennDiagram1.7.3
venneuler1.1-4VGAM1.1-11
VGAMdata1.1-9vglmer1.0.3
vhica0.2.8VIC50.2.6
VIM6.2.2VineCopula2.5.0
vines1.1.5vip0.4.1
viridis0.6.5viridisLite0.4.2
visNetwork2.1.2visualize4.5.0
vkR0.2volatilityTrader1.0.1
volcano3D2.0.9volleystat0.2.0
vpc1.2.2vroom1.6.5
vrtest1.2vsn3.72.0
W3CMarkupValidator0.1-7waiter0.2.5
waldo0.5.2warp0.2.1
washdata0.1.4WASP1.4.4
waterData1.0.8waterquality1.0.0
WaveletComp1.1wavelets0.3-0.2
waveslim1.8.5wavethresh4.7.2
wavScalogram1.1.3waywiser0.6.0
wbstats1.0.4wCorr1.9.8
WDI2.7.8wdm0.2.4
wdman0.2.6weatherOz1.0.0
WebAnalytics0.9.12webchem1.3.0
webdriver1.0.6WebGestaltR0.4.6
webmockr1.0.0webreadr0.4.0
webshot0.5.5webshot20.1.1
websocket1.4.2webutils1.2.0
wehoop2.1.0WeightedPortTest1.1
WeightIt1.2.0weights1.0.4
welo0.1.4WeMix4.0.3
WGCNA1.72-5WH1.1.1
whisker0.4.1whitebox2.4.0
whitening1.4.0whoami1.3.0
widgetframe0.3.1widgetTools1.82.0
WikidataQueryServiceR1.0.0WikidataR2.3.3
WikipediR1.7.1wikitaxa0.4.0
wildlifeDI1.0.0wilson2.4.2
windex2.0.8wINEQ1.2.0
withr3.0.1wk0.9.2
wktmo1.0.5wkutils0.1.3
wnl0.8.1wooldridge1.4-3
worcs0.1.14word2vec0.4.0
wordcloud2.6wordnet0.1-17
workflowr1.7.1workflows1.1.4
workflowsets1.1.0worldfootballR0.6.2
worldmet0.9.8worrms0.4.3
wpp20171.2-3wpp20191.1-1
wql1.0.1WrightMap1.3
writexl1.5.0WriteXLS6.7.0
wrMisc1.15.1wrProteo1.12.0
WRSS3.1wrswoR1.1.1
WRTDStidal1.1.4WufooR1.0.1
x121.10.3x13binary1.1.61
xaringan0.30XBRL0.99.19.1
xfun0.46xgboost1.7.8.1
xgxr1.1.2XLConnect1.0.10
xlsx0.6.5xlsxjars0.6.1
XML3.99-0.17xml21.3.6
XML2R0.0.8xmlrpc21.1
xopen1.0.1xplain0.2.2
xpose0.4.18xpose.nlmixr20.4.0
xpose44.7.3xslt1.4.5
xtable1.8-4xts0.14.0
XVector0.44.0xxIRT2.1.2
yaImpute1.0-34yaml2.3.10
yardstick1.3.1yesno0.1.3
yhatr0.15.1yorkr0.0.42
ypssc1.1.0yuima1.15.27
yulab.utils0.1.5zeallot0.1.0
zen4R0.10zic0.9.1
ZIM1.1.0ZINARp0.1.0
zip2.3.1zipfR0.6-70
zlib1.0.3zlibbioc1.50.0
zoo1.8-12ZRA0.2
ztable0.2.3zTree1.0.7
zyp0.11-1

RStudio Server

R: 4.4.1

rstudio-server: 2024.04.2-764

Release Notes

Upgraded the operating system from Ubuntu 20.04 to Ubuntu 22.04, and all R packages to their latest versions.

This AMI provides thousands of R packages covering various domains such as data science, machine learning, economitrics, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, reproducible research, phylogenetics, web technologies, hydrology, sports analytics, natural language processing, actuarial science, optimization, genomics, proteomics, metabolomics, transcriptomics, and other omics.

R packages (4293)

packageversionpackageversion
abc2.2.1abc.data1.1
ABCoptim0.15.0abcrf1.9
abglasso0.1.1abind1.4-5
abtest1.0.1accrualPlot1.0.7
acebayes1.10acepack1.4.2
ACNE0.9.1acp2.1
acs2.1.4ACSWR1.0
ActivePathways2.0.5actuar3.3-4
actuaRE0.1.5ActuarialM0.1.0
actuaryr1.1.1actxps1.5.0
ada2.0-5adagio0.9.2
adaptivetau2.3-1adaptMCMC1.5
adaptr1.4.0ADAPTS1.0.22
adaptsmoFMRI1.2adaptTest1.2
additivityTests1.1-4.2ade41.7-22
ade4TkGUI0.3-1adegenet2.1.10
adegraphics1.0-21adehabitatHR0.4.21
adehabitatHS0.3.17adehabitatLT0.3.27
adehabitatMA0.3.16adephylo1.1-16
adespatial0.3-23ADGofTest0.3
adimpro0.9.7adiv2.2.1
adjclust0.6.9adlift1.4-5
admisc0.35AdMit2.1.9
ads1.5-10AdvancedBasketballStats1.0.1
AER1.2-12affy1.82.0
affyio1.74.0africamonitor0.2.4
agricolae1.3-7agricolaeplotr0.5.0
agridat1.23agriwater1.0.2
agvgd0.1.2AhoCorasickTrie0.1.2
aion1.0.4airGR1.7.6
airGRdatasets0.2.1airGRdatassim0.1.3
airGRiwrm0.6.2airGRteaching0.3.3
airports0.1.0airr1.5.0
ajv1.0.0akima0.6-3.4
alabama2023.1.0alakazam1.3.0
aLFQ1.3.6AlgDesign1.2.1
aliases2entrez0.1.2almanac1.0.0
alpaca0.3.4alphavantager0.1.3
altair4.2.3ALTopt0.1.2
Amelia1.8.2ammiBayes1.0-2
ampir1.1.0AMR2.1.1
anabel3.0.1AnaCoDa0.1.4.4
anacor1.1-4analogsea1.0.7.2
analogue0.17-6anesrake0.80
animation2.7anipaths0.10.3
anMC0.2.5annotate1.82.0
AnnotationBustR1.3.0AnnotationDbi1.66.0
AnnuityRIR1.0-0Anthropometry1.19
anytime0.3.9ao1.1.0
aod1.3.3aoos0.5.0
AovBay0.1.0apc2.0.0
apcluster1.4.13ape5.8
apex1.0.6APFr1.0.2
aphid1.3.5aphylo0.3-3
apisensr1.0.0aplot0.2.3
apollo0.3.3approximator1.2-8
apsimx2.7.7ARCensReg3.0.1
arcgislayers0.3.0arcgisutils0.3.0
archetypes2.2-0.1archive1.1.8
archivist2.3.6arcpbf0.1.4
ArDec2.1-1ARDL0.2.4
ardl.nardl1.3.0areal0.1.8
arfima1.8-1argo3.0.2
argparse2.2.3arima23.1.0
arkhe1.7.0arm1.14-4
aroma.affymetrix3.2.2aroma.apd0.7.0
aroma.cn1.7.1aroma.core3.3.1
aroma.light3.34.0arpr0.1.2
arrangements1.1.9arrow16.1.0
ars0.7arsenal3.6.3
aRxiv0.10ascii2.6
asd2.2ash1.0-15
ashr2.2-63AsioHeaders1.22.1-2
askpass1.2.0aspect1.0-6
ASSA2.0assertthat0.2.1
AssetCorr1.0.4astsa2.1
asymmetry2.0.4ata1.1.1
atom4R0.3-3atRisk0.1.0
attempt0.3.1attention0.4.0
AUC0.3.2audio0.1-11
autoFRK1.4.3autoimage2.2.3
automap1.1-9autostsm3.1.5
av0.9.0aweek1.0.3
aws2.5-5aws.signature0.6.0
awsMethods1.1-1AzureAppInsights0.3.1
AzureAuth1.3.3AzureCognitive1.0.1
AzureContainers1.3.2AzureCosmosR1.0.0
AzureGraph1.3.4AzureKusto1.1.3
AzureQstor1.0.1AzureRMR2.4.4
AzureStor3.7.0AzureTableStor1.0.0
AzureVision1.0.2AzureVM2.2.2
babelgene22.9babelwhale1.2.0
babette2.3.4BACCO2.1-0
BACCT1.0backports1.5.0
backtest0.3-4bacondecomp0.1.1
baggr0.7.8bain0.2.11
BalancedSampling2.0.6BaM1.0.3
bama1.3.0bamdit3.4.1
bamlss1.2-4BAMMtools2.1.11
bang1.0.4BANOVA1.2.1
BarcodingR1.0-3BART2.9.9
bartCause1.0-8bartcs1.2.2
bartMachine1.3.4.1bartMachineJARs1.2.1
BAS1.7.1basad0.3.0
base642.0.1base64enc0.1-3
base64url1.4baseballr1.6.0
basicMCMCplots0.2.7BASiNET0.0.5
BaSkePro1.1.1BasketballAnalyzeR0.5.0
BASS1.3.1BatchExperiments1.4.3
BatchJobs1.9batchmeans1.0-4
BAwiR1.3.2baycn1.2.0
bayefdr0.2.1bayes4psy1.2.12
bayesAB1.1.3bayesammi0.1.0
bayesanova1.6BayesARIMAX0.1.1
BayesBinMix1.4.1bayesbio1.0.0
bayesboot0.2.2BayesBP1.1
BayesCACE1.2.3BayesCombo1.0
BayesComm0.1-2bayescopulareg0.1.3
bayescount0.9.99-9BayesCR2.1
bayesCT0.99.3BayesCTDesign0.6.1
BayesDA2012.04-1bayesDccGarch3.0.4
bayesdfa1.3.3bayesdistreg0.1.0
bayesDP1.3.6BayesFactor0.9.12-4.7
BayesFM0.1.7bayesforecast1.0.1
bayesGAM0.0.2bayesGARCH2.1.10
BayesGOF5.2BayesGPfit1.1.0
BayesGWQS0.1.1bayesian1.0.1
bayesianETAS1.0.3BayesianFactorZoo0.0.0.2
Bayesiangammareg0.1.0BayesianGLasso0.2.0
BayesianLaterality0.1.2BayesianNetwork0.3.2
BayesianTools0.1.8bayesianVARs0.1.3
bayesImageS0.6-1BayesLCA1.9
bayesLife5.2-0BayesLN0.2.10
BayesLogit2.1bayeslongitudinal0.1.0
bayesm3.1-6BayesMallows2.2.1
BayesMassBal1.1.0bayesmeta3.4
bayesmix0.7-6bayesnec2.1.2.0
bayesplot1.11.1bayesQR2.4
bayesRecon0.3.0bayestestR0.14.0
bayesTFR7.4-2BayesTools0.2.17
BayesTree0.3-1.5BayesVarSel2.2.5
BayesX0.3-3BAYSTAR0.2-10
baytrends2.0.12BB2019.10-1
BBmisc1.13bbmle1.0.25.1
bbotk1.0.1BCBCSF1.0-1
BCC19970.1.1BClustLonG0.1.3
bcpa1.3.2bcrm0.5.4
BDgraph2.72bdrc1.1.0
bdsmatrix1.3-7BE0.2.4
beachmat2.20.0beadarray2.54.0
BeadDataPackR1.56.0beakr0.4.3
bearishTrader1.0.2beastier2.5.1
beautier2.6.12BED1.5.2
beepr2.0beeswarm0.4.0
benchmarkme1.0.8benchmarkmeData1.0.4
BenfordTests1.2.0bentcableAR0.3.1
Bergm5.0.7Bernadette1.1.5
berryFunctions1.22.5Bessel0.6-1
BetaBit2.2betafunctions1.9.0
betapart1.6betareg3.2-0
betategarch3.3BETS0.4.9
bets.covid191.0.0beyondWhittle1.2.1
bezier1.1.2bfast1.6.1
BGLR1.1.2BGVAR2.5.7
bgw0.1.3BH1.84.0-0
BHH22016.05.31BiasCorrector0.2.2
BiasedUrn2.0.12bibtex0.5.1
biclust2.0.3.1bidask2.0.4
bife0.7.2BIFIEsurvey3.6-6
biganalytics1.1.22bigchess1.9.1
bigD0.2.0bigleaf0.8.2
biglm0.9-3bigmemory4.6.4
bigmemory.sri0.1.8bigrquery1.5.1
bigsplines1.1-1bigtime0.2.3
BigVAR1.1.2bimets4.0.2
bindr0.1.1bindrcpp0.2.3
binhf1.0-3binman0.1.3
binom1.1-1.1binr1.1.1
binseqtest1.0.4bio3d2.4-4
Biobase2.64.0BiocFileCache2.12.0
BiocGenerics0.50.0BiocIO1.14.0
BiocManager1.30.23BiocParallel1.38.0
BiocSingular1.20.0BiocVersion3.19.1
BioInsight0.3.1biomaRt2.60.1
biomartr1.0.7biomformat1.32.0
bioseq0.1.4Biostrings2.72.1
biotic0.1.2bipartite2.20
birtr1.0.0BisqueRNA1.0.5
bit4.0.5bit644.0.5
bitops1.0-8biwavelet0.20.21
bizdays1.0.16bkmr0.2.2
blaise1.3.11blastula0.3.5
blavaan0.5-5blink1.1.0
BLModel1.0.2blob1.2.4
blocklength0.1.5blockmatrix1.0
blockrand1.5blocksdesign4.9
blockTools0.6.4blogdown1.19
BLR1.6BLRPM1.0
BMA3.18.17bmgarch2.0.0
BMisc1.4.6bmixture1.7
BMS0.3.5BMTAR0.1.1
bnlearn5.0BNPTSclust2.0
BNSP2.2.3bnstruct1.0.15
boa1.1.8-2boilerpipeR1.3.2
BOIN2.7.2boiwsa1.1.1
bold1.3.0Bolstad0.2-41
Bolstad21.0-29bondAnalyst1.0.1
bookdown0.40Boom0.9.15
BoomSpikeSlab1.2.6bootnet1.6
BootPR1.0bootstrap2019.6
bootUR1.0.4BoSSA3.7
boussinesq1.0.6boxr0.3.6
bpca1.3-6bqtl1.0-36
BradleyTerry21.1-2brainR1.6.0
brandwatchR0.3.0breakfast2.4
brew1.0-10brglm0.7.2
brglm20.9.2bridgesampling1.1-2
BRINDA0.1.5brio1.1.5
brms2.21.0Brobdingnag1.2-9
broman0.84broom1.0.6
broom.helpers1.15.0brotli1.3.0
bsam1.1.3bsamGP1.2.5
BSgenome1.72.0bsicons0.1.2
bslib0.8.0BsMD2023.920
bspec1.6bspmma0.1-2
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bsts0.9.10bsvars3.1
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WikidataQueryServiceR1.0.0WikidataR2.3.3
WikipediR1.7.1wikitaxa0.4.0
wildlifeDI1.0.0wilson2.4.2
windex2.0.8wINEQ1.2.0
withr3.0.1wk0.9.2
wktmo1.0.5wkutils0.1.3
wnl0.8.1wooldridge1.4-3
worcs0.1.14word2vec0.4.0
wordcloud2.6wordnet0.1-17
workflowr1.7.1workflows1.1.4
workflowsets1.1.0worldfootballR0.6.2
worldmet0.9.8worrms0.4.3
wpp20171.2-3wpp20191.1-1
wql1.0.1WrightMap1.3
writexl1.5.0WriteXLS6.7.0
wrMisc1.15.1wrProteo1.12.0
WRSS3.1wrswoR1.1.1
WRTDStidal1.1.4WufooR1.0.1
x121.10.3x13binary1.1.61
xaringan0.30XBRL0.99.19.1
xfun0.46xgboost1.7.8.1
xgxr1.1.2XLConnect1.0.10
xlsx0.6.5xlsxjars0.6.1
XML3.99-0.17xml21.3.6
XML2R0.0.8xmlrpc21.1
xopen1.0.1xplain0.2.2
xpose0.4.18xpose.nlmixr20.4.0
xpose44.7.3xslt1.4.5
xtable1.8-4xts0.14.0
XVector0.44.0xxIRT2.1.2
yaImpute1.0-34yaml2.3.10
yardstick1.3.1yesno0.1.3
yhatr0.15.1yorkr0.0.42
ypssc1.1.0yuima1.15.27
yulab.utils0.1.5zeallot0.1.0
zen4R0.10zic0.9.1
ZIM1.1.0ZINARp0.1.0
zip2.3.1zipfR0.6-70
zlib1.0.3zlibbioc1.50.0
zoo1.8-12ZRA0.2
ztable0.2.3zTree1.0.7
zyp0.11-1

RStudio Server

R: 4.4.1

rstudio-server: 2024.04.2-764

Release Notes

Upgraded R to version 4.4.1, rstudio-server to version 2024.04.2-764, and all R packages to their latest versions; removed GPU support that will be integrated into a separate AMI product.

This AMI provides thousands of R packages covering various domains such as data science, machine learning, economitrics, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, reproducible research, phylogenetics, web technologies, hydrology, sports analytics, natural language processing, actuarial science, optimization, genomics, proteomics, metabolomics, transcriptomics, and other omics.

R packages (4410)

packageversionpackageversion
abc2.2.1abc.data1.1
ABCoptim0.15.0abcrf1.9
abglasso0.1.1abind1.4-5
abtest1.0.1accrualPlot1.0.7
acebayes1.10acepack1.4.2
ACNE0.9.1acp2.1
acs2.1.4ACSWR1.0
ActivePathways2.0.4actuar3.3-4
actuaRE0.1.5ActuarialM0.1.0
actuaryr1.1.1actxps1.5.0
ada2.0-5adagio0.9.2
adaptivetau2.3-1adaptMCMC1.5
adaptr1.4.0ADAPTS1.0.22
adaptsmoFMRI1.2adaptTest1.2
additivityTests1.1-4.2ade41.7-22
ade4TkGUI0.3-1adegenet2.1.10
adegraphics1.0-21adehabitatHR0.4.21
adehabitatHS0.3.17adehabitatLT0.3.27
adehabitatMA0.3.16adephylo1.1-16
adespatial0.3-23ADGofTest0.3
adimpro0.9.6adiv2.2.1
adjclust0.6.9adlift1.4-5
admisc0.35AdMit2.1.9
ads1.5-10AdvancedBasketballStats1.0.1
AER1.2-12affy1.82.0
affyio1.74.0africamonitor0.2.4
agricolae1.3-7agricolaeplotr0.5.0
agridat1.23agriwater1.0.2
agvgd0.1.2AhoCorasickTrie0.1.2
aion1.0.2airGR1.7.6
airGRdatasets0.2.1airGRdatassim0.1.3
airGRiwrm0.6.2airGRteaching0.3.2
airports0.1.0airr1.5.0
ajv1.0.0akima0.6-3.4
alabama2023.1.0alakazam1.3.0
aLFQ1.3.6AlgDesign1.2.1
aliases2entrez0.1.2almanac1.0.0
alpaca0.3.4alphavantager0.1.3
altair4.2.3ALTopt0.1.2
Amelia1.8.2AmericanCallOpt0.95
ammiBayes1.0-2ampir1.1.0
AMR2.1.1anabel3.0.1
AnaCoDa0.1.4.4anacor1.1-4
analogsea1.0.7.2analogue0.17-6
anesrake0.80animation2.7
anipaths0.10.3anMC0.2.5
annotate1.82.0AnnotationBustR1.3.0
AnnotationDbi1.66.0AnnuityRIR1.0-0
Anthropometry1.19anytime0.3.9
ao1.0.0aod1.3.3
aoos0.5.0AovBay0.1.0
apc2.0.0apcluster1.4.13
ape5.8apex1.0.6
APFr1.0.2aphid1.3.5
aphylo0.3-3apisensr1.0.0
aplot0.2.3apollo0.3.3
approximator1.2-8apt3.0
ARCensReg3.0.1arcgislayers0.2.0
arcgisutils0.3.0ArchaeoChron0.1
ArchaeoPhases2.0archetypes2.2-0.1
archivist2.3.6ArDec2.1-1
ARDL0.2.4ardl.nardl1.3.0
areal0.1.8arfima1.8-1
argo3.0.2argparse2.2.3
arima23.1.0arkhe1.6.0
arm1.14-4aroma.affymetrix3.2.2
aroma.apd0.7.0aroma.cn1.7.1
aroma.core3.3.1aroma.light3.34.0
arpr0.1.2arrangements1.1.9
arrow16.1.0ars0.7
arsenal3.6.3aRxiv0.10
ascii2.6asd2.2
ash1.0-15ashr2.2-63
AsioHeaders1.22.1-2askpass1.2.0
aspect1.0-6ASSA2.0
assertive.base0.0-9assertive.files0.0-2
assertive.numbers0.0-2assertthat0.2.1
AssetCorr1.0.4astrochron1.3
astsa2.1asymmetry2.0.4
ata1.1.1atom4R0.3-3
atRisk0.1.0aTSA3.1.2.1
attempt0.3.1attention0.4.0
AUC0.3.2audio0.1-11
autoFRK1.4.3autoimage2.2.3
automap1.1-9autostsm3.1.5
av0.9.0aweek1.0.3
aws2.5-5aws.signature0.6.0
awsMethods1.1-1AzureAppInsights0.3.1
AzureAuth1.3.3AzureCognitive1.0.1
AzureContainers1.3.2AzureCosmosR1.0.0
AzureGraph1.3.4AzureKusto1.1.3
AzureQstor1.0.1AzureRMR2.4.4
AzureStor3.7.0AzureTableStor1.0.0
AzureVision1.0.2AzureVM2.2.2
babelgene22.9babelwhale1.2.0
babette2.3.4BACCO2.1-0
BACCT1.0backports1.5.0
backtest0.3-4bacondecomp0.1.1
baggr0.7.8bain0.2.11
BalancedSampling2.0.6BaM1.0.3
bama1.3.0bamdit3.4.0
bamlss1.2-4BAMMtools2.1.11
bang1.0.3BANOVA1.2.1
BarcodingR1.0-3BART2.9.9
bartBMA1.0bartCause1.0-8
bartcs1.2.2bartMachine1.3.4.1
bartMachineJARs1.2.1BAS1.7.1
basad0.3.0base642.0.1
base64enc0.1-3base64url1.4
baseballDBR0.1.2baseballr1.6.0
basicMCMCplots0.2.7BASiNET0.0.5
BaSkePro1.1.1BasketballAnalyzeR0.5.0
BASS1.3.1BatchExperiments1.4.3
BatchJobs1.9batchmeans1.0-4
BAwiR1.3.2baycn1.2.0
bayefdr0.2.1bayes4psy1.2.12
bayesAB1.1.3bayesammi0.1.0
bayesanova1.6BayesARIMAX0.1.1
BayesBinMix1.4.1bayesbio1.0.0
bayesboot0.2.2BayesBP1.1
bayesbr0.0.1.0BayesCACE1.2.3
BayesCombo1.0BayesComm0.1-2
bayescopulareg0.1.3bayescount0.9.99-9
BayesCR2.1bayesCT0.99.3
BayesCTDesign0.6.1BayesDA2012.04-1
bayesDccGarch3.0.4bayesdfa1.3.3
bayesdistreg0.1.0bayesDP1.3.6
BayesFactor0.9.12-4.7BayesFM0.1.7
bayesforecast1.0.1bayesGAM0.0.2
bayesGARCH2.1.10BayesGOF5.2
BayesGPfit1.1.0BayesGWQS0.1.1
bayesian1.0.1bayesianETAS1.0.3
BayesianFactorZoo0.0.0.2Bayesiangammareg0.1.0
BayesianGLasso0.2.0BayesianLaterality0.1.2
BayesianNetwork0.3BayesianTools0.1.8
bayesianVARs0.1.3bayesImageS0.6-1
BayesLCA1.9bayesLife5.2-0
bayeslincom1.3.0BayesLN0.2.10
BayesLogit2.1bayesloglin1.0.1
bayeslongitudinal0.1.0bayesm3.1-6
BayesMallows2.2.1BayesMassBal1.1.0
bayesmeta3.4bayesmix0.7-6
bayesnec2.1.2.0bayesplot1.11.1
bayesQR2.4bayesRecon0.3.0
BayesSAE1.0-2bayestestR0.13.2
bayesTFR7.4-2BayesTools0.2.17
BayesTree0.3-1.5BayesVarSel2.2.5
BayesX0.3-3BAYSTAR0.2-10
baytrends2.0.11BB2019.10-1
BBmisc1.13bbmle1.0.25.1
bbotk1.0.0BCBCSF1.0-1
BCC19970.1.1BCE2.2.0
Bchron4.7.6BClustLonG0.1.3
bcp4.0.3bcpa1.3.2
bcrm0.5.4BDgraph2.72
bdrc1.1.0bdsmatrix1.3-7
BE0.2.4beachmat2.20.0
beadarray2.54.0BeadDataPackR1.56.0
beakr0.4.3bearishTrader1.0.2
beastier2.5.1beautier2.6.12
BED1.5.2beepr1.3
beeswarm0.4.0benchmarkme1.0.8
benchmarkmeData1.0.4BenfordTests1.2.0
bentcableAR0.3.1Bergm5.0.7
Bernadette1.1.5berryFunctions1.22.5
Bessel0.6-0BEST0.5.4
BetaBit2.2betafunctions1.9.0
betapart1.6betareg3.1-4
betategarch3.3BETS0.4.9
bets.covid191.0.0beyondWhittle1.2.1
bezier1.1.2bfast1.6.1
BFpack1.3.0BGGM2.1.2
BGLR1.1.2BGVAR2.5.5
bgw0.1.3BH1.84.0-0
BHH22016.05.31BiasCorrector0.2.2
BiasedUrn2.0.12bibtex0.5.1
biclust2.0.3.1bidask2.0.4
bife0.7.2BIFIEsurvey3.6-6
biganalytics1.1.22bigchess1.9.1
bigD0.2.0bigleaf0.8.2
biglm0.9-3bigmemory4.6.4
bigmemory.sri0.1.8bigrquery1.5.1
bigsplines1.1-1bigtime0.2.3
BigVAR1.1.2bimets3.0.2
bindr0.1.1bindrcpp0.2.3
binhf1.0-3binman0.1.3
binom1.1-1.1binomSamSize0.1-5
binr1.1.1binseqtest1.0.4
bio3d2.4-4Biobase2.64.0
BiocFileCache2.12.0BiocGenerics0.50.0
BiocIO1.14.0BiocManager1.30.23
BiocParallel1.38.0BiocSingular1.20.0
BiocVersion3.19.1bioinactivation1.2.3
BioInsight0.3.1biomaRt2.60.1
biomartr1.0.7biomformat1.32.0
bioOED0.2.1bioseq0.1.4
Biostrings2.72.1biotic0.1.2
bipartite2.20birtr1.0.0
BisqueRNA1.0.5bit4.0.5
bit644.0.5bitops1.0-7
biwavelet0.20.21bizdays1.0.16
bkmr0.2.2blaise1.3.11
blastula0.3.5blavaan0.5-5
blink1.1.0BLModel1.0.2
blob1.2.4blocklength0.1.5
blockmatrix1.0blockrand1.5
blocksdesign4.9blockTools0.6.4
blogdown1.19BLR1.6
BLRPM1.0BMA3.18.17
bmgarch2.0.0BMisc1.4.6
bmixture1.7BMS0.3.5
BMTAR0.1.1bnlearn4.9.4
BNPTSclust2.0BNSP2.2.3
bnstruct1.0.15boa1.1.8-2
boilerpipeR1.3.2BOIN2.7.2
boiwsa1.1.1bold1.3.0
Bolstad0.2-41Bolstad21.0-29
bondAnalyst1.0.1bookdown0.39
Boom0.9.15BoomSpikeSlab1.2.6
bootnet1.6BootPR1.0
bootstrap2019.6bootUR1.0.4
BoSSA3.7boussinesq1.0.6
boxr0.3.6bpca1.3-6
bqtl1.0-36BradleyTerry21.1-2
brainR1.6.0brandwatchR0.3.0
breakfast2.4brew1.0-10
brglm0.7.2brglm20.9.2
bridgesampling1.1-2BRINDA0.1.5
brio1.1.5brms2.21.0
Brobdingnag1.2-9broman0.84
broom1.0.6broom.helpers1.15.0
brotli1.3.0bsam1.1.3
bsamGP1.2.5BSgenome1.72.0
bsicons0.1.2bslib0.7.0
BsMD2023.920bspec1.6
bspmma0.1-2bssm2.0.2
BSSprep0.1bsts0.9.10
bsvars3.0.1BTLLasso0.1-13
BTM0.3.7bullishTrader1.0.1
bundesbank0.1-12BurStFin1.3
BurStMisc1.1BVAR1.0.5
bvarsv1.1bvartools0.2.4
bvls1.4C500.1.8
ca0.71.1cabinets0.6.0
cabootcrs2.1.0cachem1.1.0
cacIRT1.4CADFtest0.3-3
caffsim0.2.2Cairo1.6-2
CALANGO1.0.16calculus1.0.1
calibrar0.9.0calibrate1.7.7
CalibrateSSB1.3.0calibrator1.2-8
callr3.7.6cancensus0.5.7
candisc0.9.0canprot2.0.0
CANSIM2R1.14.1caper1.0.3
captr0.3.0capushe1.1.2
car3.1-2caRamel1.3
CARBayes6.1.1CARBayesdata3.0
CARBayesST4.0carData3.0-5
caret6.0-94carfima2.0.2
caribou1.1-1carrier0.1.1
cartogram0.3.0Cascade2.1
CascadeData1.4CAST1.0.2
castor1.8.0CatDataAnalysis0.1-5
cate1.1.1caTools1.18.2
catR3.17causact0.5.5
CausalImpact1.3.0CAvariants6.0
CB21.3.4cbioportalR1.1.0
cbsodataR1.0.1ccaPP0.3.3
cccp0.3-1cdlTools1.13
CDM8.2-6CDNmoney2012.4-2
cds1.0.3CellNOptR1.50.0
cellranger1.1.0censReg0.5-38
censusapi0.8.0CEoptim1.3
CePa0.8.0CeRNASeek2.1.3
cfbfastR1.9.0cffr1.0.1
cfr0.1.1CFtime1.4.0
ChainLadder0.2.18chandwich1.1.6
changepoint2.2.4changepoint.geo1.0.2
changepoint.np1.0.5checkLuhn1.1.0
checkmate2.3.1checkpoint1.0.2
chem.databases1.0.0ChemoSpec6.1.10
ChemoSpecUtils1.0.4cherryblossom0.1.0
chess1.0.1chilemapas0.3.0
chk0.9.1CHNOSZ2.1.0
choiceDes0.9-3cholera0.8.0
CholWishart1.1.2choroplethr3.7.3
choroplethrMaps1.0.1chromoMap4.1.1
chromote0.2.0chron2.3-61
cifti0.4.5cinterpolate1.0.1
circlize0.4.16CircSpaceTime0.9.0
CircStats0.2-6circular0.5-0
ciTools0.6.1Ckmeans.1d.dp4.3.5
Claddis0.6.3clarabel0.9.0
clarifai0.4.2classInt0.4-10
cleanepi1.0.2clevr0.1.2
cli3.6.3clifro3.2-5
climatol4.1.0clime0.5.0
clinDR2.4.1clinfun1.1.5
clinicalsignificance2.0.0clinPK0.13.0
clinsig1.2clipr0.8.0
clisymbols1.2.0clmplus1.0.0
clock0.7.0clubSandwich0.5.11
clue0.3-65clustDRM0.1-0
clusterGeneration1.3.8clustermole1.1.1
clusterPower0.7.0clusterProfiler4.12.0
clusterSEs2.6.5clustMixType0.3-14
ClustVarLV2.1.1clv0.3-2.4
cmaes1.0-12cmaesr1.0.3
CMLS1.0-1cmm1.0
cmocean0.3-1cmprsk2.2-12
cmrutils1.3.1CNLTreg0.1-2
CNLTtsa0.1-2cNORM3.0.4
CNORode1.46.0coalescentMCMC0.4-4
coalitions0.6.24coarseDataTools0.6-6
cobalt4.5.5cobs1.3-8
coconots1.1.3COCONUT1.0.2
cocor1.1-4cocorresp0.4-4
cocron1.0-1coda0.19-4.1
cOde1.1.1coin1.4-3
cointReg0.2.0colf0.1.3
collapse2.0.14collapsibleTree0.1.8
collections0.3.7colorr1.0.0
colorRamps2.3.4colorspace2.1-0
colourpicker1.3.0colourvalues0.3.9
combinat0.0-8combinedevents0.1.1
CombinS1.1-1ComICS1.0.4
CommonJavaJars1.1-0commonmark1.9.1
compare0.2-6compas0.1.1
complex1.0.0ComplexHeatmap2.20.0
CompQuadForm1.4.3comprehenr0.6.10
conditionz0.1.0coneproj1.19
conf.design2.0.0config0.3.2
confintr1.0.2conflicted1.2.0
conos1.5.2conquer1.3.3
conquestr1.3.0constrainedKriging0.2-7
contactdata1.0.0contfrac1.1-12
convevol2.0.1convey1.0.0
coop0.6-3cops1.11-3
copula1.1-3copulaData0.0-2
copulaedas1.4.3cordillera1.0-0
corHMM2.8coro1.0.4
corona0.3.0coronavirus0.4.1
corpcor1.6.10corpora0.6
corporaexplorer0.8.6corrgram1.14
corrplot0.92cosa2.1.0
CoSMoS2.1.0costat2.4.1
countrycode1.6.0CovCombR1.0
COVID193.0.3covid19.analytics2.1.3.3
covid19br0.1.8covid19dbcand0.1.1
covid19france0.1.0covid19italy0.3.1
covid19sf0.1.2covid19swiss0.1.0
covid19us0.1.9CovidMutations0.1.3
cowplot1.1.3cp4p0.3.6
CPBayes1.1.0cpk1.3-1
cplm0.7-12cpp110.4.7
CptNonPar0.2.1CRABS1.2.0
crawl2.3.0crayon1.5.3
crch1.1-2credentials2.0.1
credule0.1.4crfsuite0.4.2
cricketdata0.2.3cricketr0.0.26
CRM1.2.4crmPack1.0.6
crossdes1.1-2crosslag0.1.0
Crossover0.1-22crosstalk1.2.1
crs0.15-37crseEventStudy1.2.2
crsmeta0.3.0crul1.4.2
crunch1.30.4crunchy0.3.3
cryptoQuotes1.3.1cSEM0.5.0
CSGo0.6.7cshapes2.0
CSHShydRology1.4.0csodata1.5.0
cstab0.2-2csv0.6.2
ctbi2.0.5ctmcmove1.2.9
ctmm1.2.0ctrdata1.18.0
ctsem3.10.0ctsemOMX1.0.6
CTT2.3.3CTTShiny0.1
ctv0.9-5cubature2.1.0
cubble0.3.0cubelyr1.0.2
cubfits0.1-4Cubist0.4.2.1
cumSeg1.3curl5.2.1
cvar0.5cvAUC1.1.4
CVST0.2-3CVXR1.0-14
D3mirt2.0.4d3Network0.5.2.1
DAAG1.25.6dae3.2.28
daewr1.2-11dagitty0.3-4
DAKS2.1-3DALEX2.4.3
DAMOCLES2.3data.table1.15.4
data.tree1.1.0DatabaseConnector6.3.2
DataExplorer0.8.3dataone2.2.2
datapack1.4.1datapasta3.1.0
dataRetrieval2.7.15datarobot2.18.6
dataseries0.2.0dataverse0.3.14
datawizard0.11.0date1.2-42
dateback1.0.5datetimeoffset0.3.1
datetimeutils0.6-4dbarts0.9-28
dbhydroR0.2-8DBI1.2.3
DBItest1.8.1dbmss2.9-0
dbparser2.0.3dbplyr2.5.0
dbscan1.2-0dbx0.3.2
DChaos0.1-7dclone2.3-2
DCluster0.2-10DClusterm1.0-1
dcov0.1.1dCovTS1.4
dcurver0.9.2ddalpha1.3.15
DDD5.2.2dde1.0.5
DDPM0.1.0deBInfer0.4.4
debugme1.2.0decompr6.4.0
deducorrect1.3.7deductive1.0.0
DeductiveR1.0.0deeptime1.1.1
Delaporte8.4.1DelayedArray0.30.1
DelayedMatrixStats1.26.0deldir2.0-4
deltaPlotR1.6demography2.0
dendextend1.17.1dendsort0.3.4
densEstBayes1.0-2.2DEoptim2.2-8
DEoptimR1.1-3depmix0.9.16
depmixS41.5-0DepthProc2.1.5
depthTools0.7Deriv4.1.3
derivmkts0.2.5desc1.4.3
DescTools0.99.54deseats1.0.0
DESeq21.44.0designmatch0.5.4
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simPop2.1.3simputation0.2.8
simrel2.1.0SiMRiv1.0.6
simsem0.5-16SimSurvey0.1.6
SingleCellExperiment1.26.0singleCellHaystack1.0.2
singleRcapture0.2.1.1singscore1.24.0
siplab1.6sirt4.1-15
sitmo2.0.2sits1.5.0
sjlabelled1.2.0sjmisc2.8.10
SkewHyperbolic0.4-2skmeans0.2-16
skpr1.7.1slackr3.3.1
slam0.1-50SlaPMEG1.0.1
SLBDD0.0.4slcm0.1.0
sleekts1.0.2sleeperapi1.1.1
Sleuth22.0-7Sleuth31.0-6
slfm1.0.2SLHD2.1-1
slider0.3.1slippymath0.3.1
sm2.2-6.0smacof2.1-6
smacofx1.5-3smacpod2.6
SmallCountRounding1.0.3smam0.7.2
smapr0.2.1SMDIC0.1.5
smerc1.8.3smoof1.6.0.3
smooth4.0.2smoother1.3
smoothr1.0.1smoots1.1.4
smovie1.1.6SMPracticals1.4-3.1
sms2.3.1SMVar1.3.4
sn2.1.1sna2.7-2
snakecase0.11.1snow0.4-4
SnowballC0.7.1snowfall1.84-6.3
snpStats1.54.0snvecR3.9.4
SOAs1.4soc.ca0.8.0
socceR0.1.1socialmixr0.3.2
sodium1.3.1sofa0.4.0
SoilHyP0.1.7soilhypfit0.1-7
soilwater1.0.5solaR0.46
solartime0.0.2solrium1.2.0
solvebio2.14.0soma1.2.0
sonicLength1.4.7sorvi0.8.21
SoupX1.6.2sourcetools0.1.7-1
sp2.1-4sp23design0.9-1
spacetime1.3-1spam2.10-0
spaMM4.5.0spant2.21.0
sparklyr1.8.6sparktex0.1
sparr2.3-10SparseArray1.4.8
sparseDFM1.0SparseFactorAnalysis1.0
sparseinv0.1.3SparseM1.84
sparseMatrixStats1.16.0sparseMVN0.2.2
sparsevar0.1.0spatgraphs3.4
spatialCovariance0.6-9SpatialEpi1.2.8
SpatialExperiment1.14.0SpatialExtremes2.1-0
SpatialPosition2.1.2spatialprobit1.0.4
spatialreg1.3-4spatialsample0.5.1
SpatialTools1.0.5spatialwidget0.2.5
spatstat3.0-8spatstat.data3.1-2
spatstat.explore3.2-7spatstat.geom3.2-9
spatstat.linnet3.1-5spatstat.model3.2-11
spatstat.random3.2-3spatstat.sparse3.1-0
spatstat.utils3.0-5spBayes0.4-7
spBayesSurv1.1.8Spbsampling1.3.5
spd2.0-1spData2.3.1
spdep1.3-5spec0.1.9
spectral2.0speff2trial1.0.5
SPEI1.8.1spelling2.3.0
sperrorest3.0.5sphet2.0
spiderbar0.2.5spikeslab1.1.6
spikeSlabGAM1.1-19spINAR0.2.0
spind2.2.1splancs2.01-45
SPLICE1.1.2splines20.5.2
splitstackshape1.4.8splm1.6-5
spls2.2-3splus2R1.3-5
spmodel0.6.0spmoran0.2.3
SportsTour0.1.0sportyR2.2.2
SPOT2.11.14SpotSampling0.1.0
spselect0.0.1spsur1.0.2.5
spsurvey5.5.1spTimer3.3.2
sptotal1.0.1sqldf0.4-11
SqlRender1.18.0SQRL1.0.2
SQUAREM2021.1srvyr1.2.0
ssanv1.1SSBtools1.5.2
ssfa1.2.2ssgraph1.15
ssize.fdr1.3ssizeRNA1.3.2
ssMousetrack1.1.6ssmrob1.0
SSN1.1.17SSN20.1.1
sstvars1.0.1stable1.1.6
stabledist0.7-1stabs0.6-4
staggered1.1stampr0.3.1
StanHeaders2.32.9StanMoMo1.2.0
stargazer5.2.3starma1.3
stars0.6-5starter0.1.15
STARTS1.3-8startupmsg0.9.6.1
statcanR0.2.6statcodelists0.9.2
statcomp0.1.0statebins1.4.0
statespacer0.5.0stationaRy0.5.1
statip0.2.3StatMatch1.4.2
statmod1.5.0statnet.common4.9.0
StatRank0.0.6statVisual1.2.1
steadyICA1.0SteinIV0.1-1
STFTS0.1.0stinepack1.5
stlplus0.5.1stm1.3.7
STMedianPolish0.2StMoMo0.4.1
stochprofML2.0.3stochQN0.1.2-1
stochvol3.2.4stockAnalyst1.0.1
stops1.6-2stopwords2.3
storr1.2.5stplanr1.2.1
stR0.6strand0.2.0
strap1.6-1stratification2.2-7
streamDepletr0.2.0streamR0.4.5
stringdist0.9.12stringfish0.16.0
stringi1.8.4stringmagic1.1.2
stringr1.5.1strucchange1.5-3
strucchangeRcpp1.5-3-1.0.4StructuralDecompose0.1.1
styler1.10.3subplex1.8
subscore3.3sufficientForecasting0.1.0
sugrrants0.2.9SummarizedExperiment1.34.0
summclust0.7.2SUMMER1.4.0
suntools1.0.0supclust1.1-1
SuperLearner2.0-29superml0.5.7
superpc1.12SuppDists1.1-9.7
support.CEs0.7-0surface0.5
SurrogateRegression0.6.0.1suRtex0.9
survcomp1.54.0surveillance1.23.0
survey4.4-2surveybootstrap0.0.3
surveydata0.2.7surveyoutliers0.1
surveyplanning4.0surveysd1.3.1
survival6660.5survivalROC1.0.3.1
survminer0.4.9survMisc0.5.6
survPresmooth1.1-11sva3.52.0
svars1.3.11svd0.5.5
svDialogs1.1.0SVDNF0.1.8
svglite2.1.3svGUI1.0.1
svrep0.6.4svs3.1.1
svUnit1.0.6swagger5.17.14.1
sweep0.2.5swephR0.3.1
SwimmeR0.14.2swirl2.4.5
swirlify0.5.3switchr0.14.8
SWTools1.0.3sylly0.1-6
sym.arma1.0symengine0.2.6
symmoments1.2.1synchronicity1.3.10
SYNCSA1.3.4Synth1.1-8
synthACS1.7.1synthesis1.2.4
SynthETIC1.1.0synthpop1.8-0
sys3.4.2sysfonts0.8.9
systemfit1.1-30systemfonts1.1.0
table11.4.3tables0.9.28
tabnet0.6.0tabuSearch1.1.1
TAF4.2.0tagcloud0.6
TailRank3.2.2TAM4.2-21
tanaka0.4.0TAQMNGR2018.5-1
targets1.7.1tau0.0-25
taxize0.9.100tbea1.4.2
TBRDist1.0.2tbrf0.1.5
TCA1.2.1TCGAbiolinks2.32.0
TCGAbiolinksGUI.data1.24.0TcGSA0.12.10
tcltk21.2-11Tcomp1.0.1
tdigest0.4.2TeachingDemos2.13
teamcolors0.0.4telegram.bot3.0.0
telemac0.1.1tempdisagg1.1.1
tensor1.5tensorA0.36.2.1
tensorflow2.16.0TensorPreAve1.1.0
tensorTS1.0.2TEQR6.0-0
tergm4.2.0Ternary2.3.1
terra1.7-78terrainr0.7.5
TESS2.1.2tesseract5.2.1
testcorr0.2.0TestDataImputation2.3
TestDesign1.6.1tester0.2.0
TestFunctions0.2.1testit0.13
TestScorer1.7.2testthat3.2.1.1
TexExamRandomizer1.2.7texreg1.39.3
text2vec0.6.4textcat1.0-8
textir2.0-5textplot0.2.2
textrank0.3.1textreuse0.1.5
textshaping0.4.0textTinyR1.1.8
tfarima0.3.2tfautograph0.3.2
tfdatasets2.9.0tfhub0.8.1
tfio0.4.1TFisher0.2.0
tfplot2021.6-1tframe2015.12-1.1
tfruns1.5.3tgp2.4-22
TGS1.0.1TH.data1.1-2
theft0.6.1thief0.3
ThreeArmedTrials1.0-4threeBrain1.0.1
ThreeGroups0.21threejs0.3.3
ThreeWay1.1.3thurstonianIRT0.12.5
tibble3.2.1tibbletime0.1.8
tictoc1.2.1Tides2.1
tidyBdE0.3.6tidycensus1.6.3
tidyestimate1.1.1tidygraph1.3.1
tidyhydat0.6.1tidyLPA1.1.0
tidymodels1.2.0tidyquant1.0.7
tidyqwi0.1.2tidyr1.3.1
tidyREDCap1.1.1tidyRSS2.0.7
tidyselect1.2.1tidySEM0.2.7
tidysynth0.2.0tidytable0.11.0
tidyterra0.6.1tidytext0.4.2
tidytree0.4.6tidyverse2.0.0
tidyvpc1.5.1tiff0.1-12
tigris2.1tikzDevice0.12.6
timechange0.3.0timeDate4032.109
timeless0.2.1timeSeries4032.109
timeseriesdb1.0.0-1.1.2timetk2.9.0
timsac1.3.8-4tinyarray2.4.2
tinyProject0.6.1tinytable0.3.0
tinytex0.51tis1.39
tkrplot0.0-27tkWidgets1.82.0
TLMoments0.7.5.3tm0.7-13
tm.plugin.alceste1.1.1tm.plugin.dc0.2-10
tm.plugin.europresse1.4tm.plugin.factiva1.8
tm.plugin.lexisnexis1.4.1tm.plugin.mail0.2-2
tmap3.3-4tmaptools3.1-1
TMB1.9.13Tmisc1.0.1
tmod0.50.13tmvnsim1.0-2
tmvtnorm1.6tnet3.0.16
tokenizers0.3.0tokenizers.bpe0.1.3
toOrdinal1.3-0.0topicdoc0.1.1
topicmodels0.2-16topicmodels.etm0.1.0
topmodel0.7.5topologyGSA1.5.0
toprdata1.0.2torch0.13.0
torchaudio0.3.1.9000torchdatasets0.3.1
torchvision0.6.0tpr0.3-3
tracerer2.2.3trackdem0.7.2
trackdf0.3.3trackdown1.1.1
trackeR1.6.0trackeRapp1.2
TrackReconstruction1.3tractor.base3.4.2
traipse0.3.0trajectories0.2-8
TrajectoryUtils1.12.0trajr1.5.1
transformr0.1.5transfR1.0.11
TransPhylo1.4.5trapezoid2.0-2
traudem1.0.3tree1.0-43
treebalance1.2.0treebase0.1.5
TreeBUGS1.5.0treedater0.5.0
TreeDist2.7.0treefit1.0.2
treeio1.28.0treemap2.4-4
TreeSearch1.5.1TreeSim2.4
treespace1.1.4.3TreeTools1.11.1
trend1.1.6trendeval0.1.0
trending0.1.0TrialSize1.4
triangle1.0triebeard0.4.1
trimcluster0.1-5trip1.10.0
tripack1.3-9.1tripEstimation0.0-46
TripleR1.5.4TruncatedNormal2.2.2
truncdist1.0-2truncnorm1.0-9
truncreg0.2-5trust0.1-8
trustOptim0.8.7.3tryCatchLog1.3.1
TSA1.3.1TSANN0.1.0
tsbox0.4.1tsBSS1.0.0
TSCAN1.42.0TSclust1.3.1
tscount1.4.3tsdataleaks2.1.1
tsdb1.1-0tsdecomp0.2
TSdeeplearning0.1.0tsdisagg20.1.0
TSdisaggregation2.0.0TSdist3.7.1
tsdistributions1.0.1tsDyn11.0.4.1
TSEAL0.1.2TSEntropies0.9
tseries0.10-56tseriesChaos0.1-13.1
tseriesEntropy0.7-2tseriesTARMA0.3-4
tsfeatures1.1.1tsfknn0.6.0
tsgarch1.0.2tsibble1.1.5
tsibbledata0.4.1tsibbletalk0.1.0
tsintermittent1.10tsiR0.4.3
TSLSTM0.1.0TSLSTMplus1.0.4
tsmethods1.0.1tsModel0.6-2
tsne0.1-3.1tsnet0.1.0
tsoutliers0.6-10TSP1.2-4
tsPI1.0.4TSrepr1.1.0
tsrobprep0.3.2tssim0.1.7
TSstudio0.1.7tstests1.0.0
TSTutorial1.2.7tsutils0.9.4
tswge2.1.0tth4.16-0
TTR0.24.4tufterhandout1.2.1
tune1.2.1turner0.1.9
TUWmodel1.1-1tvm0.5.2
twdtw1.0-1tweedie2.3.5
tweenr2.0.3twosamples2.0.1
TxDb.Hsapiens.UCSC.hg19.knownGene3.2.2TxDb.Hsapiens.UCSC.hg38.knownGene3.18.0
txtq0.2.4tzdb0.4.0
uaparserjs0.3.5ubiquity2.0.3
ucminf1.2.2UComp5.0.0
UCSC.utils1.0.0udpipe0.8.11
ufRisk1.0.7ugatsdb0.2.3
uGMAR3.4.5umap0.2.10.0
uncmbb0.2.2unglue0.1.0
UnifiedDoseFinding0.1.10unifir0.2.4
units0.8-5univOutl0.4
unrepx1.0-2unrtf1.4.5
UpSetR1.4.0uptasticsearch0.4.0
urca1.3-4urlchecker1.0.1
urlshorteneR1.5.7urltools1.7.3
uroot2.1-3USA.state.boundaries1.0.1
usdata0.3.1usethis2.2.3
usmap0.7.1usmapdata0.3.0
utf81.2.4utility1.4.6
uuid1.2-0uwot0.2.2
V84.4.2VALERIE1.1.0
validate1.1.5validatetools0.5.2
valr0.8.1VAM1.1.0
vapour0.10.0VAR.etp1.1
varbvs2.6-10VARDetect0.1.8
vardiag0.2-1vardpoor0.20.1
VaRES1.0.2vars1.6-1
VARshrink0.3.1varycoef0.3.4
VCA1.5.1vcd1.4-12
vcdExtra0.8-5vcr1.2.2
vctrs0.6.5vdg1.2.3
VedicDateTime0.1.9vegan2.6-6.1
vegawidget0.5.0vegperiod0.4.0
VennDiagram1.7.3venneuler1.1-4
VGAM1.1-11VGAMdata1.1-9
vglmer1.0.3vhica0.2.8
VIC50.2.6VIM6.2.2
VineCopula2.5.0vines1.1.5
vip0.4.1viridis0.6.5
viridisLite0.4.2visNetwork2.1.2
visualize4.5.0vkR0.2
volatilityTrader1.0.1volcano3D2.0.9
volleystat0.2.0vpc1.2.2
vroom1.6.5vrtest1.2
vsn3.72.0W3CMarkupValidator0.1-7
waiter0.2.5waldo0.5.2
warp0.2.1washdata0.1.4
WASP1.4.3waterData1.0.8
waterquality1.0.0Watersheds1.1
WaveletComp1.1wavelets0.3-0.2
WaveSampling0.1.3waveslim1.8.5
wavethresh4.7.2wavScalogram1.1.3
waywiser0.6.0wbstats1.0.4
wCorr1.9.8WDI2.7.8
wdm0.2.4wdman0.2.6
WebAnalytics0.9.12webchem1.3.0
webdriver1.0.6WebGestaltR0.4.6
webmockr0.9.0webreadr0.4.0
webshot0.5.5webshot20.1.1
websocket1.4.1webutils1.2.0
wehoop2.0.0WeightedPortTest1.1
WeightIt1.1.0weights1.0.4
welo0.1.4WeMix4.0.3
WGCNA1.72-5WH1.1.1
whisker0.4.1whitebox2.4.0
whitening1.4.0whoami1.3.0
widgetframe0.3.1widgetTools1.82.0
WikidataQueryServiceR1.0.0WikidataR2.3.3
wikipediatrend2.1.6WikipediR1.7.1
wikitaxa0.4.0wildlifeDI1.0.0
wilson2.4.2windex2.0.8
wINEQ1.2.0withr3.0.0
wk0.9.1wktmo1.0.5
wkutils0.1.3wnl0.8.1
wooldridge1.4-3worcs0.1.14
word2vec0.4.0wordcloud2.6
wordnet0.1-17workflowr1.7.1
workflows1.1.4workflowsets1.1.0
worldfootballR0.6.2worldmet0.9.8
worrms0.4.3wpp20171.2-3
wpp20191.1-1wql1.0.1
WrightMap1.3writexl1.5.0
WriteXLS6.6.0wrMisc1.15.0.3
wrProteo1.11.0.1WRSS3.1
wrswoR1.1.1WRTDStidal1.1.4
WufooR1.0.1x121.10.3
x13binary1.1.61xaringan0.30
XBRL0.99.19.1xfun0.45
xgboost1.7.7.1xgxr1.1.2
XLConnect1.0.10xlsx0.6.5
xlsxjars0.6.1XML3.99-0.17
xml21.3.6XML2R0.0.8
xmlrpc21.1xopen1.0.1
xplain0.2.2xpose0.4.18
xpose.nlmixr20.4.0xpose44.7.3
xslt1.4.5xtable1.8-4
xts0.14.0XVector0.44.0
xxIRT2.1.2yaImpute1.0-34
yaml2.3.8yardstick1.3.1
yesno0.1.2yhatr0.15.1
yorkr0.0.42ypssc1.1.0
yuima1.15.27yulab.utils0.1.4
zeallot0.1.0zen4R0.10
zic0.9.1ZIM1.1.0
ZINARp0.1.0zip2.3.1
zipfR0.6-70zlib1.0.3
zlibbioc1.50.0zoo1.8-12
ZRA0.2ztable0.2.3
zTree1.0.7zyp0.11-1

RStudio Server

R: 4.4.0

rstudio-server: 2023.12.0+369

CUDA Version: 11.7

GPU Driver Version: 515.43.04

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R: 4.4.0; rstudio-server: 2023.12.0+369; CUDA Version: 11.7; GPU Driver Version: 515.43.04

This AMI provides thousands of R packages covering various domains such as data science, machine learning, economitrics, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, reproducible research, phylogenetics, web technologies, hydrology, sports analytics, natural language processing, actuarial science, optimization, genomics, proteomics, metabolomics, transcriptomics, and other omics.

R packages (4170)

packageversionpackageversion
abc2.2.1abc.data1.1
ABCoptim0.15.0abcrf1.9
abglasso0.1.1abind1.4-5
abtest1.0.1accrualPlot1.0.7
acebayes1.10acepack1.4.2
acp2.1acs2.1.4
ACSWR1.0ActivePathways2.0.3
actuar3.3-4actuaRE0.1.5
ActuarialM0.1.0actuaryr1.1.1
actxps1.4.0ada2.0-5
adagio0.9.2adaptivetau2.3-1
adaptMCMC1.5adaptr1.3.2
ADAPTS1.0.22adaptsmoFMRI1.2
adaptTest1.2additivityTests1.1-4.1
ade41.7-22ade4TkGUI0.3-1
adegenet2.1.10adegraphics1.0-21
adehabitatHR0.4.21adehabitatHS0.3.17
adehabitatLT0.3.27adehabitatMA0.3.16
adephylo1.1-16ADGofTest0.3
adimpro0.9.6adiv2.2.1
adjclust0.6.9admisc0.35
AdMit2.1.9ads1.5-10
AdvancedBasketballStats1.0.1AER1.2-12
affy1.78.0affyio1.70.0
africamonitor0.2.4agricolae1.3-7
agricolaeplotr0.5.0agridat1.23
agriwater1.0.2agvgd0.1.2
AhoCorasickTrie0.1.2airGR1.7.6
airGRdatassim0.1.3airGRiwrm0.6.2
airGRteaching0.3.2airports0.1.0
airr1.5.0ajv1.0.0
akima0.6-3.4alabama2023.1.0
alakazam1.3.0aLFQ1.3.6
AlgDesign1.2.1aliases2entrez0.1.2
almanac1.0.0alpaca0.3.4
alphavantager0.1.3ALTopt0.1.2
Amelia1.8.2AmericanCallOpt0.95
ammiBayes1.0-2ampir1.1.0
AMR2.1.1anabel3.0.1
AnaCoDa0.1.4.4anacor1.1-4
analogsea1.0.7.2anesrake0.80
animation2.7anipaths0.10.3
anMC0.2.5annotate1.78.0
AnnotationBustR1.3.0AnnotationDbi1.62.1
AnnuityRIR1.0-0Anthropometry1.19
anytime0.3.9ao0.3.3
aod1.3.3aoos0.5.0
AovBay0.1.0apc2.0.0
apcluster1.4.12ape5.8
APFr1.0.2aphid1.3.5
aphylo0.3-3aplot0.2.2
apollo0.3.2approximator1.2-8
apt3.0ARCensReg3.0.1
arcgislayers0.2.0arcgisutils0.2.0
ArchaeoChron0.1ArchaeoPhases1.8
archetypes2.2-0.1archivist2.3.6
ArDec2.1-1ARDL0.2.4
ardl.nardl1.3.0areal0.1.8
arfima1.8-1argparse2.2.3
arm1.14-4aroma.apd0.7.0
arpr0.1.2arrangements1.1.9
arrow15.0.1ars0.7
aRxiv0.10ascii2.6
asd2.2ash1.0-15
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askpass1.2.0aspect1.0-6
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treespace1.1.4.3TreeTools1.10.0
trend1.1.6trendeval0.1.0
trending0.1.0TrialSize1.4
triangle1.0triebeard0.4.1
trimcluster0.1-5trip1.10.0
tripack1.3-9.1tripEstimation0.0-46
TripleR1.5.4TruncatedNormal2.2.2
truncdist1.0-2truncnorm1.0-9
truncreg0.2-5trust0.1-8
trustOptim0.8.7.3tryCatchLog1.3.1
TSA1.3.1TSANN0.1.0
tsbox0.4.1tsBSS1.0.0
TSCAN1.38.0TSclust1.3.1
tscount1.4.3tsdb1.1-0
tsdecomp0.2TSdeeplearning0.1.0
tsdisagg20.1.0TSdisaggregation2.0.0
TSdist3.7.1tsDyn11.0.4.1
TSEntropies0.9tseries0.10-55
tseriesChaos0.1-13.1tseriesEntropy0.7-2
tseriesTARMA0.3-4tsfeatures1.1.1
tsfknn0.6.0tsibble1.1.4
tsibbledata0.4.1tsibbletalk0.1.0
tsintermittent1.10tsiR0.4.3
TSLSTM0.1.0tsModel0.6-1
tsne0.1-3.1tsoutliers0.6-10
TSP1.2-4tsPI1.0.4
TSrepr1.1.0tsrobprep0.3.2
tssim0.1.7TSstudio0.1.7
TSTutorial1.2.7tsutils0.9.4
tswge2.1.0tth4.12-0-1
TTR0.24.4tufterhandout1.2.1
tune1.2.1turner0.1.9
TUWmodel1.1-1tvm0.5.2
tweedie2.3.5tweenr2.0.3
twosamples2.0.1TxDb.Hsapiens.UCSC.hg19.knownGene3.2.2
TxDb.Hsapiens.UCSC.hg38.knownGene3.17.0txtq0.2.4
tzdb0.4.0uaparserjs0.3.5
ubiquity2.0.3ucminf1.2.1
UComp4.0.2udpipe0.8.11
ufRisk1.0.7ugatsdb0.2.3
uGMAR3.4.5umap0.2.10.0
uncmbb0.2.2unglue0.1.0
UnifiedDoseFinding0.1.10units0.8-5
univOutl0.4unrepx1.0-2
unrtf1.4.5UpSetR1.4.0
uptasticsearch0.4.0urca1.3-3
urlchecker1.0.1urlshorteneR1.5.7
urltools1.7.3uroot2.1-3
USA.state.boundaries1.0.1usdata0.2.0
usethis2.2.3usmap0.7.1
usmapdata0.2.2utf81.2.4
utility1.4.6uuid1.2-0
uwot0.2.2V84.4.2
VALERIE1.1.0validate1.1.5
validatetools0.5.2valr0.8.1
VAM1.1.0vapour0.9.5
VAR.etp1.1varbvs2.6-10
VARDetect0.1.6vardiag0.2-1
vardpoor0.20.1VaRES1.0.2
vars1.6-1VARshrink0.3.1
varycoef0.3.4VCA1.5.1
vcd1.4-12vcdExtra0.8-5
vcr1.2.2vctrs0.6.5
vdg1.2.3VedicDateTime0.1.9
vegan2.6-4vegperiod0.4.0
VennDiagram1.7.3venneuler1.1-4
VGAM1.1-10VGAMdata1.1-9
vglmer1.0.3vhica0.2.8
VIC50.2.6VIM6.2.2
VineCopula2.5.0vines1.1.5
vip0.4.1viridis0.6.5
viridisLite0.4.2visNetwork2.1.2
visualize4.5.0vkR0.2
volatilityTrader1.0.1volcano3D2.0.9
volleystat0.2.0vpc1.2.2
vroom1.6.5vrtest1.2
W3CMarkupValidator0.1-7waiter0.2.5
waldo0.5.2warp0.2.1
washdata0.1.4WASP1.4.3
waterData1.0.8waterquality1.0.0
Watersheds1.1WaveletComp1.1
wavelets0.3-0.2WaveSampling0.1.3
waveslim1.8.4wavethresh4.7.2
wavScalogram1.1.3wbstats1.0.4
wCorr1.9.8WDI2.7.8
wdman0.2.6WebAnalytics0.9.12
webchem1.3.0webdriver1.0.6
WebGestaltR0.4.6webmockr0.9.0
webreadr0.4.0webshot0.5.5
webshot20.1.1websocket1.4.1
webutils1.2.0wehoop2.0.0
WeightIt1.0.0weights1.0.4
welo0.1.4WeMix4.0.3
WGCNA1.72-5WH1.1.1
whisker0.4.1whitebox2.3.4
whitening1.4.0whoami1.3.0
widgetframe0.3.1WikidataQueryServiceR1.0.0
WikidataR2.3.3wikipediatrend2.1.6
WikipediR1.7.1wikitaxa0.4.0
wildlifeDI1.0.0windex2.0.7
wINEQ1.2.0withr3.0.0
wk0.9.1wktmo1.0.5
wkutils0.1.3wnl0.8.0
wooldridge1.4-3worcs0.1.14
word2vec0.4.0wordcloud2.6
wordnet0.1-16workflowr1.7.1
workflows1.1.4workflowsets1.1.0
worldfootballR0.6.2worldmet0.9.8
worrms0.4.3wpp20171.2-3
wpp20191.1-1wql1.0.0
WrightMap1.3writexl1.5.0
WriteXLS6.5.0wrMisc1.14.2
wrProteo1.11.0.1WRSS3.1
wrswoR1.1.1WRTDStidal1.1.4
WufooR1.0.1x121.10.3
x13binary1.1.60xaringan0.30
XBRL0.99.19.1xfun0.43
xgboost1.7.7.1xgxr1.1.2
XLConnect1.0.9xlsx0.6.5
xlsxjars0.6.1XML3.99-0.16.1
xml21.3.6XML2R0.0.6
xmlrpc21.1xopen1.0.0
xplain0.2.2xpose0.4.18
xpose.nlmixr20.4.0xpose44.7.3
xslt1.4.5xtable1.8-4
xts0.13.2XVector0.40.0
xxIRT2.1.2yaImpute1.0-34
yaml2.3.8yardstick1.3.1
yesno0.1.2yhatr0.15.1
yorkr0.0.42ypssc1.1.0
yuima1.15.27yulab.utils0.1.4
zeallot0.1.0zen4R0.9
zic0.9.1ZIM1.1.0
ZINARp0.1.0zip2.3.1
zipfR0.6-70zlib1.0.3
zlibbioc1.46.0zoo1.8-12
ZRA0.2ztable0.2.3
zTree1.0.7zyp0.11-1

RStudio Server

R: 4.4.0

rstudio-server: 2023.12.0+369

CUDA Version: 11.7

GPU Driver Version: 515.43.04

Release Notes

Upgraded R to version 4.4.0 and all R packages to their latest versions.

R: 4.4.0; rstudio-server: 2023.12.0+369; CUDA Version: 11.7; GPU Driver Version: 515.43.04

This AMI provides thousands of R packages covering various domains such as data science, machine learning, economitrics, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, reproducible research, phylogenetics, web technologies, hydrology, sports analytics, natural language processing, actuarial science, optimization, genomics, proteomics, metabolomics, transcriptomics, and other omics.

R packages (4170)

packageversionpackageversion
abc2.2.1abc.data1.1
ABCoptim0.15.0abcrf1.9
abglasso0.1.1abind1.4-5
abtest1.0.1accrualPlot1.0.7
acebayes1.10acepack1.4.2
acp2.1acs2.1.4
ACSWR1.0ActivePathways2.0.3
actuar3.3-4actuaRE0.1.5
ActuarialM0.1.0actuaryr1.1.1
actxps1.4.0ada2.0-5
adagio0.9.2adaptivetau2.3-1
adaptMCMC1.5adaptr1.3.2
ADAPTS1.0.22adaptsmoFMRI1.2
adaptTest1.2additivityTests1.1-4.1
ade41.7-22ade4TkGUI0.3-1
adegenet2.1.10adegraphics1.0-21
adehabitatHR0.4.21adehabitatHS0.3.17
adehabitatLT0.3.27adehabitatMA0.3.16
adephylo1.1-16ADGofTest0.3
adimpro0.9.6adiv2.2.1
adjclust0.6.9admisc0.35
AdMit2.1.9ads1.5-10
AdvancedBasketballStats1.0.1AER1.2-12
affy1.78.0affyio1.70.0
africamonitor0.2.4agricolae1.3-7
agricolaeplotr0.5.0agridat1.23
agriwater1.0.2agvgd0.1.2
AhoCorasickTrie0.1.2airGR1.7.6
airGRdatassim0.1.3airGRiwrm0.6.2
airGRteaching0.3.2airports0.1.0
airr1.5.0ajv1.0.0
akima0.6-3.4alabama2023.1.0
alakazam1.3.0aLFQ1.3.6
AlgDesign1.2.1aliases2entrez0.1.2
almanac1.0.0alpaca0.3.4
alphavantager0.1.3ALTopt0.1.2
Amelia1.8.2AmericanCallOpt0.95
ammiBayes1.0-2ampir1.1.0
AMR2.1.1anabel3.0.1
AnaCoDa0.1.4.4anacor1.1-4
analogsea1.0.7.2anesrake0.80
animation2.7anipaths0.10.3
anMC0.2.5annotate1.78.0
AnnotationBustR1.3.0AnnotationDbi1.62.1
AnnuityRIR1.0-0Anthropometry1.19
anytime0.3.9ao0.3.3
aod1.3.3aoos0.5.0
AovBay0.1.0apc2.0.0
apcluster1.4.12ape5.8
APFr1.0.2aphid1.3.5
aphylo0.3-3aplot0.2.2
apollo0.3.2approximator1.2-8
apt3.0ARCensReg3.0.1
arcgislayers0.2.0arcgisutils0.2.0
ArchaeoChron0.1ArchaeoPhases1.8
archetypes2.2-0.1archivist2.3.6
ArDec2.1-1ARDL0.2.4
ardl.nardl1.3.0areal0.1.8
arfima1.8-1argparse2.2.3
arm1.14-4aroma.apd0.7.0
arpr0.1.2arrangements1.1.9
arrow15.0.1ars0.7
aRxiv0.10ascii2.6
asd2.2ash1.0-15
ashr2.2-63AsioHeaders1.22.1-2
askpass1.2.0aspect1.0-6
ASSA2.0assertive.base0.0-9
assertive.files0.0-2assertive.numbers0.0-2
assertthat0.2.1AssetCorr1.0.4
astrochron1.2astsa2.1
asymmetry2.0.4ata1.1.1
atom4R0.3-3atRisk0.1.0
aTSA3.1.2.1attempt0.3.1
attention0.4.0AUC0.3.2
audio0.1-11autoFRK1.4.3
autoimage2.2.3automap1.1-9
autostsm3.1.4av0.9.0
aweek1.0.3aws2.5-5
aws.signature0.6.0awsMethods1.1-1
AzureAuth1.3.3AzureCognitive1.0.1
AzureContainers1.3.2AzureCosmosR1.0.0
AzureGraph1.3.4AzureKusto1.1.3
AzureQstor1.0.1AzureRMR2.4.4
AzureStor3.7.0AzureTableStor1.0.0
AzureVision1.0.2AzureVM2.2.2
babelgene22.9babelwhale1.2.0
BACCO2.1-0BACCT1.0
backports1.4.1backtest0.3-4
bacondecomp0.1.1baggr0.7.8
bain0.2.10BalancedSampling2.0.6
BaM1.0.3bama1.3.0
bamdit3.4.0bamlss1.2-3
BAMMtools2.1.11bang1.0.3
BANOVA1.2.1BarcodingR1.0-3
BART2.9.7bartBMA1.0
bartCause1.0-6bartMachine1.3.4.1
bartMachineJARs1.2.1BAS1.7.1
basad0.3.0base642.0.1
base64enc0.1-3base64url1.4
baseballDBR0.1.2basicMCMCplots0.2.7
BASiNET0.0.5BaSkePro1.1.1
BasketballAnalyzeR0.5.0BASS1.3.1
BatchExperiments1.4.3BatchJobs1.9
batchmeans1.0-4BAwiR1.3.2
baycn1.2.0bayefdr0.2.1
bayes4psy1.2.12bayesAB1.1.3
bayesammi0.1.0bayesanova1.6
BayesARIMAX0.1.1BayesBinMix1.4.1
bayesbio1.0.0bayesboot0.2.2
BayesBP1.1bayesbr0.0.1.0
BayesCACE1.2.3BayesCombo1.0
BayesComm0.1-2bayescopulareg0.1.3
bayescount0.9.99-9BayesCR2.1
bayesCT0.99.3BayesCTDesign0.6.1
BayesDA2012.04-1bayesDccGarch3.0.4
bayesdfa1.3.3bayesdistreg0.1.0
bayesDP1.3.6BayesFactor0.9.12-4.7
BayesFM0.1.5bayesforecast1.0.1
bayesGAM0.0.2bayesGARCH2.1.10
BayesGOF5.2BayesGPfit1.1.0
BayesGWQS0.1.1bayesian0.0.9
bayesianETAS1.0.3Bayesiangammareg0.1.0
BayesianGLasso0.2.0BayesianLaterality0.1.2
BayesianNetwork0.3BayesianTools0.1.8
bayesImageS0.6-1BayesLCA1.9
bayesLife5.2-0bayeslincom1.3.0
BayesLN0.2.10BayesLogit2.1
bayesloglin1.0.1bayeslongitudinal0.1.0
bayesm3.1-6BayesMallows2.2.1
BayesMassBal1.1.0bayesmeta3.4
bayesmix0.7-6bayesnec2.1.2.0
bayesplot1.11.1bayesQR2.4
BayesSAE1.0-2bayestestR0.13.2
bayesTFR7.4-2BayesTools0.2.17
BayesTree0.3-1.5BayesVarSel2.2.5
BayesX0.3-3BAYSTAR0.2-10
baytrends2.0.11BB2019.10-1
BBmisc1.13bbmle1.0.25.1
bbotk0.8.0BCBCSF1.0-1
BCC19970.1.1BCE2.2.0
Bchron4.7.6BClustLonG0.1.3
bcp4.0.3bcpa1.3.2
bcrm0.5.4BDgraph2.72
bdrc1.1.0bdsmatrix1.3-7
BE0.2.4beachmat2.16.0
beadarray2.50.0BeadDataPackR1.52.0
beakr0.4.3bearishTrader1.0.2
BED1.5.0beepr1.3
beeswarm0.4.0benchmarkme1.0.8
benchmarkmeData1.0.4BenfordTests1.2.0
bentcableAR0.3.1Bergm5.0.7
berryFunctions1.22.5Bessel0.6-0
BEST0.5.4BetaBit2.2
betafunctions1.9.0betapart1.6
betareg3.1-4betategarch3.3
BETS0.4.9bets.covid191.0.0
beyondWhittle1.2.1bezier1.1.2
bfast1.6.1BFpack1.2.3
BGGM2.1.1BGLR1.1.2
BGVAR2.5.5bgw0.1.3
BH1.84.0-0BHH22016.05.31
BiasCorrector0.2.2BiasedUrn2.0.11
bibtex0.5.1biclust2.0.3.1
bidask2.0.2bife0.7.2
BIFIEsurvey3.5-19biganalytics1.1.22
bigchess1.9.1bigD0.2.0
bigleaf0.8.2biglm0.9-2.1
bigmemory4.6.4bigmemory.sri0.1.8
bigrquery1.5.1bigsplines1.1-1
bigtime0.2.3BigVAR1.1.2
bimets3.0.2bindr0.1.1
bindrcpp0.2.3binman0.1.3
binom1.1-1.1binomSamSize0.1-5
binr1.1.1binseqtest1.0.4
bio3d2.4-4Biobase2.60.0
BiocFileCache2.8.0BiocGenerics0.46.0
BiocIO1.10.0BiocManager1.30.22
BiocParallel1.34.1BiocSingular1.16.0
BiocVersion3.17.1bioinactivation1.2.3
BioInsight0.3.1biomaRt2.56.1
biomartr1.0.7biomformat1.28.0
bioOED0.2.1bioseq0.1.4
Biostrings2.68.0biotic0.1.2
bipartite2.19birtr1.0.0
BisqueRNA1.0.5bit4.0.5
bit644.0.5bitops1.0-7
biwavelet0.20.21bizdays1.0.16
bkmr0.2.2blaise1.3.11
blastula0.3.5blavaan0.5-4
BLModel1.0.2blob1.2.4
blocklength0.1.5blockmatrix1.0
blockrand1.5blocksdesign4.9
blockTools0.6.4blogdown1.19
BLR1.6BMA3.18.17
bmgarch2.0.0BMisc1.4.6
bmixture1.7BMS0.3.5
BMTAR0.1.1bnlearn4.9.3
BNPTSclust2.0BNSP2.2.3
bnstruct1.0.15boa1.1.8-2
boilerpipeR1.3.2BOIN2.7.2
bold1.3.0Bolstad0.2-41
Bolstad21.0-29bondAnalyst1.0.1
bookdown0.39Boom0.9.15
BoomSpikeSlab1.2.6bootnet1.6
BootPR1.0bootstrap2019.6
bootUR1.0.3BoSSA3.7
boussinesq1.0.6boxr0.3.6
bpca1.3-6bqtl1.0-36
BradleyTerry21.1-2brainR1.6.0
brandwatchR0.3.0breakfast2.3
brew1.0-10brglm0.7.2
brglm20.9.2bridgesampling1.1-2
BRINDA0.1.5brio1.1.5
brms2.21.0Brobdingnag1.2-9
broman0.80broom1.0.5
broom.helpers1.15.0brotli1.3.0
bsam1.1.3bsamGP1.2.5
BSgenome1.68.0bslib0.7.0
BsMD2023.920bspec1.6
bspmma0.1-2bssm2.0.2
BSSprep0.1bsts0.9.10
bsvars2.1.0BTLLasso0.1-13
BTM0.3.7bullishTrader1.0.1
bundesbank0.1-12BurStFin1.3
BurStMisc1.1BVAR1.0.5
bvartools0.2.4bvls1.4
C500.1.8ca0.71.1
cabinets0.6.0cabootcrs2.1.0
cachem1.0.8cacIRT1.4
CADFtest0.3-3caffsim0.2.2
Cairo1.6-2CALANGO1.0.16
calculus1.0.1calibrate1.7.7
CalibrateSSB1.3.0calibrator1.2-8
callr3.7.6cancensus0.5.7
candisc0.8-6canprot2.0.0
CANSIM2R1.14.1caper1.0.3
captr0.3.0capushe1.1.2
car3.1-2caRamel1.3
CARBayes6.1.1CARBayesdata3.0
CARBayesST4.0carData3.0-5
caret6.0-94carfima2.0.2
caribou1.1-1carrier0.1.1
cartogram0.3.0Cascade2.1
CascadeData1.4CAST1.0.0
castor1.8.0cate1.1.1
caTools1.18.2catR3.17
causact0.5.5CausalImpact1.3.0
CAvariants6.0CB21.3.4
cbioportalR1.1.0cbsodataR1.0.1
ccaPP0.3.3cccp0.3-1
cdlTools1.13CDM8.2-6
CDNmoney2012.4-2cds1.0.3
CellNOptR1.46.0cellranger1.1.0
censReg0.5-36censusapi0.8.0
CEoptim1.3CePa0.8.0
CeRNASeek2.1.3cfbfastR1.9.0
CFtime1.3.0ChainLadder0.2.18
chandwich1.1.6changepoint2.2.4
changepoint.geo1.0.2changepoint.np1.0.5
checkLuhn1.1.0checkmate2.3.1
checkpoint1.0.2chem.databases1.0.0
ChemoSpec6.1.10ChemoSpecUtils1.0.4
cherryblossom0.1.0chess1.0.1
chilemapas0.3.0chk0.9.1
CHNOSZ2.1.0choiceDes0.9-3
CholWishart1.1.2choroplethr3.7.3
choroplethrMaps1.0.1chromoMap4.1.1
chromote0.2.0chron2.3-61
cifti0.4.5cinterpolate1.0.1
circlize0.4.16CircSpaceTime0.9.0
CircStats0.2-6circular0.5-0
ciTools0.6.1Ckmeans.1d.dp4.3.5
Claddis0.6.3clarabel0.5.1
clarifai0.4.2classInt0.4-10
cli3.6.2clifro3.2-5
climatol4.1.0clime0.5.0
clinDR2.4.1clinfun1.1.5
clinicalsignificance2.0.0clinPK0.13.0
clinsig1.2clipr0.8.0
clisymbols1.2.0clmplus0.1.0
clock0.7.0clubSandwich0.5.10
clue0.3-65clustDRM0.1-0
clusterGeneration1.3.8clusterPower0.7.0
clusterSEs2.6.5clustMixType0.3-14
ClustVarLV2.1.1clv0.3-2.4
cmaes1.0-12cmaesr1.0.3
CMLS1.0-1cmm1.0
cmocean0.3-1cmprsk2.2-11
cmrutils1.3.1cNORM3.0.4
CNORode1.42.0coalescentMCMC0.4-4
coalitions0.6.24coarseDataTools0.6-6
cobalt4.5.5cobs1.3-8
coconots1.1.3COCONUT1.0.2
cocor1.1-4cocorresp0.4-4
cocron1.0-1coda0.19-4.1
cOde1.1.1coin1.4-3
cointReg0.2.0colf0.1.3
collapse2.0.13collapsibleTree0.1.8
collections0.3.7colorr1.0.0
colorRamps2.3.4colorspace2.1-0
colourpicker1.3.0colourvalues0.3.9
combinat0.0-8combinedevents0.1.1
CombinS1.1-1ComICS1.0.4
CommonJavaJars1.1-0commonmark1.9.1
compare0.2-6compas0.1.1
CompQuadForm1.4.3comprehenr0.6.10
conditionz0.1.0coneproj1.17
conf.design2.0.0config0.3.2
confintr1.0.2conflicted1.2.0
conquer1.3.3conquestr1.3.0
contactdata1.0.0contfrac1.1-12
convevol2.0.1convey1.0.0
coop0.6-3cops1.3-1
copula1.1-3copulaData0.0-2
copulaedas1.4.3cordillera1.0-0
corHMM2.8coro1.0.4
corona0.3.0coronavirus0.4.1
corpcor1.6.10corpora0.6
corporaexplorer0.8.6corrgram1.14
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SimInf9.7.0SIMMS1.3.2
simpleboot1.1-7simPop2.1.3
simputation0.2.8simrel2.1.0
SiMRiv1.0.6simsem0.5-16
SimSurvey0.1.6SingleCellExperiment1.22.0
singleCellHaystack1.0.2singleRcapture0.2.1.1
singscore1.20.0siplab1.6
sirt4.1-15sitmo2.0.2
sits1.4.2-1sjlabelled1.2.0
sjmisc2.8.9SkewHyperbolic0.4-2
skmeans0.2-16skpr1.7.1
slackr3.3.1slam0.1-50
SLBDD0.0.4sleekts1.0.2
sleeperapi1.0.4Sleuth22.0-7
Sleuth31.0-6slfm1.0.2
SLHD2.1-1slider0.3.1
slippymath0.3.1sm2.2-6.0
smacof2.1-6smacpod2.6
SmallCountRounding1.0.3smam0.7.2
smapr0.2.1smerc1.8.3
smoof1.6.0.3smooth4.0.1
smoother1.3smoothr1.0.1
smoots1.1.4smovie1.1.6
SMPracticals1.4-3.1sms2.3.1
SMVar1.3.4sn2.1.1
sna2.7-2snakecase0.11.1
snow0.4-4SnowballC0.7.1
snowfall1.84-6.3snvecR3.9.3
SOAs1.4soc.ca0.8.0
socceR0.1.1socialmixr0.3.2
sodium1.3.1sofa0.4.0
SoilHyP0.1.7soilhypfit0.1-7
soilwater1.0.5solaR0.46
solartime0.0.2solrium1.2.0
solvebio2.14.0soma1.2.0
sonicLength1.4.7sorvi0.8.21
SoupX1.6.2sourcetools0.1.7-1
sp2.1-3sp23design0.9-1
spacetime1.3-1spam2.10-0
spaMM4.4.16spant2.19.0
sparklyr1.8.5sparktex0.1
sparr2.3-10sparseDFM1.0
SparseFactorAnalysis1.0sparseinv0.1.3
SparseM1.81sparseMatrixStats1.12.2
sparseMVN0.2.2sparsevar0.1.0
spatgraphs3.4spatialCovariance0.6-9
SpatialEpi1.2.8SpatialExtremes2.1-0
SpatialPosition2.1.2spatialprobit1.0.4
spatialreg1.3-2spatialsample0.5.1
SpatialTools1.0.5spatialwidget0.2.5
spatstat3.0-8spatstat.data3.0-4
spatstat.explore3.2-7spatstat.geom3.2-9
spatstat.linnet3.1-5spatstat.model3.2-11
spatstat.random3.2-3spatstat.sparse3.0-3
spatstat.utils3.0-4spBayes0.4-7
spBayesSurv1.1.8Spbsampling1.3.5
spd2.0-1spData2.3.0
spdep1.3-3spec0.1.9
spectral2.0speff2trial1.0.5
SPEI1.8.1spelling2.3.0
sperrorest3.0.5sphet2.0
spiderbar0.2.5spikeslab1.1.6
spikeSlabGAM1.1-19spINAR0.2.0
spind2.2.1splancs2.01-44
SPLICE1.1.2splines20.5.1
splm1.6-5spls2.2-3
splus2R1.3-5spmodel0.6.0
spmoran0.2.3SportsTour0.1.0
sportyR2.2.2SPOT2.11.14
SpotSampling0.1.0spselect0.0.1
spsur1.0.2.5spsurvey5.5.1
spTimer3.3.2sptotal1.0.1
sqldf0.4-11SqlRender1.17.0
SQRL1.0.2SQUAREM2021.1
srvyr1.2.0ssanv1.1
SSBtools1.5.0ssfa1.2.2
ssgraph1.15ssize.fdr1.3
ssizeRNA1.3.2ssMousetrack1.1.6
ssmrob1.0SSN1.1.17
stable1.1.6stabledist0.7-1
stabs0.6-4staggered1.1
stampr0.3.1StanHeaders2.32.6
StanMoMo1.2.0stargazer5.2.3
starma1.3stars0.6-5
starter0.1.15STARTS1.3-8
startupmsg0.9.6.1statcanR0.2.6
statcodelists0.9.2statebins1.4.0
statespacer0.5.0stationaRy0.5.1
statip0.2.3StatMatch1.4.1
statmod1.5.0statnet.common4.9.0
StatRank0.0.6steadyICA1.0
SteinIV0.1-1STFTS0.1.0
stinepack1.5stlplus0.5.1
stm1.3.7STMedianPolish0.2
StMoMo0.4.1stochprofML2.0.3
stochQN0.1.2-1stochvol3.2.4
stockAnalyst1.0.1stopwords2.3
storr1.2.5stplanr1.1.2
stR0.6strand0.2.0
strap1.6-0stratification2.2-7
streamDepletr0.2.0streamR0.4.5
stringdist0.9.12stringfish0.16.0
stringi1.8.3stringmagic1.1.0
stringr1.5.1strucchange1.5-3
strucchangeRcpp1.5-3-1.0.4StructuralDecompose0.1.1
styler1.10.3subplex1.8
subscore3.3sufficientForecasting0.1.0
sugrrants0.2.9SummarizedExperiment1.30.2
summclust0.7.2suntools1.0.0
supclust1.1-1SuperLearner2.0-29
superml0.5.7superpc1.12
SuppDists1.1-9.7support.CEs0.7-0
surface0.5SurrogateRegression0.6.0.1
suRtex0.9survcomp1.50.0
surveillance1.22.1survey4.4-2
surveybootstrap0.0.3surveydata0.2.7
surveyoutliers0.1surveyplanning4.0
surveysd1.3.1survival6660.5
survivalROC1.0.3.1survminer0.4.9
survMisc0.5.6survPresmooth1.1-11
sva3.48.0svars1.3.11
svd0.5.5svDialogs1.1.0
SVDNF0.1.8svglite2.1.3
svGUI1.0.1svrep0.6.3
svs3.0.0svUnit1.0.6
swagger3.33.1swephR0.3.1
SwimmeR0.14.2swirl2.4.5
swirlify0.5.3switchr0.14.8
sylly0.1-6sym.arma1.0
symengine0.2.6symmoments1.2.1
SYNCSA1.3.4Synth1.1-8
synthACS1.7.1synthesis1.2.4
SynthETIC1.1.0synthpop1.8-0
sys3.4.2sysfonts0.8.9
systemfit1.1-30systemfonts1.0.6
table11.4.3tables0.9.25
tabnet0.5.0tabuSearch1.1.1
TAF4.2.0tagcloud0.6
TailRank3.2.2TAM4.2-21
TAQMNGR2018.5-1targets1.7.0
tau0.0-25taxize0.9.100
TBRDist1.0.2tbrf0.1.5
TCA1.2.1TcGSA0.12.10
tcltk21.2-11Tcomp1.0.1
tdigest0.4.1TeachingDemos2.13
teamcolors0.0.4telegram.bot3.0.0
telemac0.1.1tempdisagg1.1.1
tensor1.5tensorA0.36.2.1
tensorflow2.16.0TensorPreAve1.1.0
tensorTS1.0.1TEQR6.0-0
tergm4.2.0Ternary2.3.1
terra1.7-71TESS2.1.2
tesseract5.2.1testcorr0.2.0
TestDataImputation2.3TestDesign1.6.1
tester0.2.0TestFunctions0.2.1
testit0.13TestScorer1.7.2
testthat3.2.1.1TexExamRandomizer1.2.7
texreg1.39.3text2vec0.6.4
textcat1.0-8textir2.0-5
textplot0.2.2textrank0.3.1
textreuse0.1.5textshaping0.3.7
textTinyR1.1.8tfarima0.3.2
tfautograph0.3.2tfdatasets2.9.0
tfio0.4.1TFisher0.2.0
tfplot2021.6-1tframe2015.12-1.1
tfruns1.5.3tgp2.4-22
TH.data1.1-2theft0.6.1
thief0.3ThreeArmedTrials1.0-4
threeBrain1.0.1ThreeGroups0.21
threejs0.3.3ThreeWay1.1.3
thurstonianIRT0.12.5tibble3.2.1
tibbletime0.1.8tictoc1.2.1
Tides2.1tidyBdE0.3.6
tidycensus1.6.3tidyestimate1.1.1
tidygraph1.3.1tidyhydat0.6.1
tidyLPA1.1.0tidymodels1.2.0
tidyquant1.0.7tidyqwi0.1.2
tidyr1.3.1tidyREDCap1.1.1
tidyRSS2.0.7tidyselect1.2.1
tidysynth0.2.0tidytable0.11.0
tidyterra0.6.0tidytext0.4.2
tidytree0.4.6tidyverse2.0.0
tiff0.1-12tigris2.1
tikzDevice0.12.6timechange0.3.0
timeDate4032.109timeSeries4032.109
timeseriesdb1.0.0-1.1.2timetk2.9.0
timsac1.3.8-4tinyProject0.6.1
tinytable0.2.1tinytex0.50
tis1.39tkrplot0.0-27
TLMoments0.7.5.3tm0.7-13
tm.plugin.alceste1.1.1tm.plugin.dc0.2-10
tm.plugin.europresse1.4tm.plugin.factiva1.8
tm.plugin.lexisnexis1.4.1tm.plugin.mail0.2-2
tmap3.3-4tmaptools3.1-1
TMB1.9.11Tmisc1.0.1
tmod0.50.13tmvnsim1.0-2
tmvtnorm1.6tnet3.0.16
tokenizers0.3.0tokenizers.bpe0.1.3
toOrdinal1.3-0.0topicdoc0.1.1
topicmodels0.2-16topicmodels.etm0.1.0
topmodel0.7.5toprdata1.0.2
torch0.12.0torchaudio0.3.1.9000
torchdatasets0.3.0torchvision0.5.1
tpr0.3-3tracerer2.2.3
trackdem0.6trackdf0.3.3
trackdown1.1.1trackeR1.6.0
trackeRapp1.2TrackReconstruction1.3
tractor.base3.4.2traipse0.3.0
trajectories0.2-8TrajectoryUtils1.8.0
trajr1.5.1transformr0.1.5
transfR1.0.11TransPhylo1.4.5
trapezoid2.0-2traudem1.0.3
tree1.0-43treebase0.1.5
TreeBUGS1.5.0treedater0.5.0
TreeDist2.7.0treefit1.0.2
treeio1.24.0treemap2.4-4
TreeSearch1.5.0TreeSim2.4
treespace1.1.4.3TreeTools1.10.0
trend1.1.6trendeval0.1.0
trending0.1.0TrialSize1.4
triangle1.0triebeard0.4.1
trimcluster0.1-5trip1.10.0
tripack1.3-9.1tripEstimation0.0-46
TripleR1.5.4TruncatedNormal2.2.2
truncdist1.0-2truncnorm1.0-9
truncreg0.2-5trust0.1-8
trustOptim0.8.7.3tryCatchLog1.3.1
TSA1.3.1TSANN0.1.0
tsbox0.4.1tsBSS1.0.0
TSCAN1.38.0TSclust1.3.1
tscount1.4.3tsdb1.1-0
tsdecomp0.2TSdeeplearning0.1.0
tsdisagg20.1.0TSdisaggregation2.0.0
TSdist3.7.1tsDyn11.0.4.1
TSEntropies0.9tseries0.10-55
tseriesChaos0.1-13.1tseriesEntropy0.7-2
tseriesTARMA0.3-4tsfeatures1.1.1
tsfknn0.6.0tsibble1.1.4
tsibbledata0.4.1tsibbletalk0.1.0
tsintermittent1.10tsiR0.4.3
TSLSTM0.1.0tsModel0.6-1
tsne0.1-3.1tsoutliers0.6-10
TSP1.2-4tsPI1.0.4
TSrepr1.1.0tsrobprep0.3.2
tssim0.1.7TSstudio0.1.7
TSTutorial1.2.7tsutils0.9.4
tswge2.1.0tth4.12-0-1
TTR0.24.4tufterhandout1.2.1
tune1.2.1turner0.1.9
TUWmodel1.1-1tvm0.5.2
tweedie2.3.5tweenr2.0.3
twosamples2.0.1TxDb.Hsapiens.UCSC.hg19.knownGene3.2.2
TxDb.Hsapiens.UCSC.hg38.knownGene3.17.0txtq0.2.4
tzdb0.4.0uaparserjs0.3.5
ubiquity2.0.3ucminf1.2.1
UComp4.0.2udpipe0.8.11
ufRisk1.0.7ugatsdb0.2.3
uGMAR3.4.5umap0.2.10.0
uncmbb0.2.2unglue0.1.0
UnifiedDoseFinding0.1.10units0.8-5
univOutl0.4unrepx1.0-2
unrtf1.4.5UpSetR1.4.0
uptasticsearch0.4.0urca1.3-3
urlchecker1.0.1urlshorteneR1.5.7
urltools1.7.3uroot2.1-3
USA.state.boundaries1.0.1usdata0.2.0
usethis2.2.3usmap0.7.1
usmapdata0.2.2utf81.2.4
utility1.4.6uuid1.2-0
uwot0.2.2V84.4.2
VALERIE1.1.0validate1.1.5
validatetools0.5.2valr0.8.1
VAM1.1.0vapour0.9.5
VAR.etp1.1varbvs2.6-10
VARDetect0.1.6vardiag0.2-1
vardpoor0.20.1VaRES1.0.2
vars1.6-1VARshrink0.3.1
varycoef0.3.4VCA1.5.1
vcd1.4-12vcdExtra0.8-5
vcr1.2.2vctrs0.6.5
vdg1.2.3VedicDateTime0.1.9
vegan2.6-4vegperiod0.4.0
VennDiagram1.7.3venneuler1.1-4
VGAM1.1-10VGAMdata1.1-9
vglmer1.0.3vhica0.2.8
VIC50.2.6VIM6.2.2
VineCopula2.5.0vines1.1.5
vip0.4.1viridis0.6.5
viridisLite0.4.2visNetwork2.1.2
visualize4.5.0vkR0.2
volatilityTrader1.0.1volcano3D2.0.9
volleystat0.2.0vpc1.2.2
vroom1.6.5vrtest1.2
W3CMarkupValidator0.1-7waiter0.2.5
waldo0.5.2warp0.2.1
washdata0.1.4WASP1.4.3
waterData1.0.8waterquality1.0.0
Watersheds1.1WaveletComp1.1
wavelets0.3-0.2WaveSampling0.1.3
waveslim1.8.4wavethresh4.7.2
wavScalogram1.1.3wbstats1.0.4
wCorr1.9.8WDI2.7.8
wdman0.2.6WebAnalytics0.9.12
webchem1.3.0webdriver1.0.6
WebGestaltR0.4.6webmockr0.9.0
webreadr0.4.0webshot0.5.5
webshot20.1.1websocket1.4.1
webutils1.2.0wehoop2.0.0
WeightIt1.0.0weights1.0.4
welo0.1.4WeMix4.0.3
WGCNA1.72-5WH1.1.1
whisker0.4.1whitebox2.3.4
whitening1.4.0whoami1.3.0
widgetframe0.3.1WikidataQueryServiceR1.0.0
WikidataR2.3.3wikipediatrend2.1.6
WikipediR1.7.1wikitaxa0.4.0
wildlifeDI1.0.0windex2.0.7
wINEQ1.2.0withr3.0.0
wk0.9.1wktmo1.0.5
wkutils0.1.3wnl0.8.0
wooldridge1.4-3worcs0.1.14
word2vec0.4.0wordcloud2.6
wordnet0.1-16workflowr1.7.1
workflows1.1.4workflowsets1.1.0
worldfootballR0.6.2worldmet0.9.8
worrms0.4.3wpp20171.2-3
wpp20191.1-1wql1.0.0
WrightMap1.3writexl1.5.0
WriteXLS6.5.0wrMisc1.14.2
wrProteo1.11.0.1WRSS3.1
wrswoR1.1.1WRTDStidal1.1.4
WufooR1.0.1x121.10.3
x13binary1.1.60xaringan0.30
XBRL0.99.19.1xfun0.43
xgboost1.7.7.1xgxr1.1.2
XLConnect1.0.9xlsx0.6.5
xlsxjars0.6.1XML3.99-0.16.1
xml21.3.6XML2R0.0.6
xmlrpc21.1xopen1.0.0
xplain0.2.2xpose0.4.18
xpose.nlmixr20.4.0xpose44.7.3
xslt1.4.5xtable1.8-4
xts0.13.2XVector0.40.0
xxIRT2.1.2yaImpute1.0-34
yaml2.3.8yardstick1.3.1
yesno0.1.2yhatr0.15.1
yorkr0.0.42ypssc1.1.0
yuima1.15.27yulab.utils0.1.4
zeallot0.1.0zen4R0.9
zic0.9.1ZIM1.1.0
ZINARp0.1.0zip2.3.1
zipfR0.6-70zlib1.0.3
zlibbioc1.46.0zoo1.8-12
ZRA0.2ztable0.2.3
zTree1.0.7zyp0.11-1

RStudio Server

R: 4.3.3

rstudio-server: 2023.12.0+369

CUDA Version: 11.7

GPU Driver Version: 515.43.04

Release Notes

Added GPU support for tensorflow.

R: 4.3.3; rstudio-server: 2023.12.0+369; CUDA Version: 11.7; GPU Driver Version: 515.43.04

This AMI provides thousands of R packages covering various domains such as data science, machine learning, economitrics, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, reproducible research, phylogenetics, web technologies, hydrology, sports analytics, natural language processing, actuarial science, optimization, genomics, proteomics, metabolomics, transcriptomics, and other omics.

R packages (4161)

packageversionpackageversion
abc2.2.1abc.data1.0
ABCoptim0.15.0abcrf1.9
abglasso0.1.1abind1.4-5
abtest1.0.1accrualPlot1.0.7
acebayes1.10acepack1.4.2
acp2.1acs2.1.4
ACSWR1.0ActivePathways2.0.3
actuar3.3-4actuaRE0.1.5
ActuarialM0.1.0actuaryr1.1.1
actxps1.4.0ada2.0-5
adagio0.9.2adaptivetau2.3
adaptMCMC1.5adaptr1.3.2
ADAPTS1.0.22adaptsmoFMRI1.2
adaptTest1.2additivityTests1.1-4.1
ade41.7-22ade4TkGUI0.3-1
adegenet2.1.10adegraphics1.0-21
adehabitatHR0.4.21adehabitatHS0.3.17
adehabitatLT0.3.27adehabitatMA0.3.16
adephylo1.1-16ADGofTest0.3
adimpro0.9.6adiv2.2.1
adjclust0.6.9admisc0.34
AdMit2.1.9ads1.5-10
AdvancedBasketballStats1.0.1AER1.2-12
affy1.78.0affyio1.70.0
africamonitor0.2.4agricolae1.3-7
agricolaeplotr0.5.0agridat1.23
agriwater1.0.2agvgd0.1.2
AhoCorasickTrie0.1.2airGR1.7.6
airGRdatassim0.1.3airGRiwrm0.6.2
airGRteaching0.3.2airports0.1.0
airr1.5.0ajv1.0.0
akima0.6-3.4alabama2023.1.0
alakazam1.3.0aLFQ1.3.6
AlgDesign1.2.1aliases2entrez0.1.2
almanac1.0.0alpaca0.3.4
alphavantager0.1.3ALTopt0.1.2
Amelia1.8.1AmericanCallOpt0.95
ammiBayes1.0-2ampir1.1.0
AMR2.1.1anabel3.0.1
AnaCoDa0.1.4.4anacor1.1-4
analogsea1.0.7.2anesrake0.80
animation2.7anipaths0.10.3
anMC0.2.5annotate1.78.0
AnnotationBustR1.3.0AnnotationDbi1.62.1
AnnuityRIR1.0-0Anthropometry1.19
anytime0.3.9ao0.3.3
aod1.3.3aoos0.5.0
AovBay0.1.0apc2.0.0
apcluster1.4.11ape5.7-1
APFr1.0.2aphid1.3.5
aphylo0.3-3aplot0.2.2
apollo0.3.1approximator1.2-8
apt3.0ARCensReg3.0.1
ArchaeoChron0.1ArchaeoPhases1.8
archetypes2.2-0.1archivist2.3.6
ArDec2.1-1ARDL0.2.4
ardl.nardl1.3.0areal0.1.8
arfima1.8-1argparse2.2.2
arm1.13-1aroma.apd0.7.0
arpr0.1.2arrangements1.1.9
arrow14.0.2.1ars0.6
aRxiv0.10ascii2.6
asd2.2ash1.0-15
ashr2.2-63AsioHeaders1.22.1-2
askpass1.2.0aspect1.0-6
ASSA2.0assertive.base0.0-9
assertive.files0.0-2assertive.numbers0.0-2
assertthat0.2.1AssetCorr1.0.4
astrochron1.2astsa2.1
asymmetry2.0.4ata1.1.1
atom4R0.3-3atRisk0.1.0
aTSA3.1.2.1attempt0.3.1
attention0.4.0AUC0.3.2
audio0.1-11autoFRK1.4.3
autoimage2.2.3automap1.1-9
autostsm3.1.3av0.9.0
aweek1.0.3aws2.5-5
aws.signature0.6.0awsMethods1.1-1
AzureAuth1.3.3AzureCognitive1.0.1
AzureContainers1.3.2AzureCosmosR1.0.0
AzureGraph1.3.4AzureKusto1.1.3
AzureQstor1.0.1AzureRMR2.4.4
AzureStor3.7.0AzureTableStor1.0.0
AzureVision1.0.2AzureVM2.2.2
babelgene22.9babelwhale1.2.0
BACCO2.1-0BACCT1.0
backports1.4.1backtest0.3-4
bacondecomp0.1.1baggr0.7.8
bain0.2.10BalancedSampling2.0.6
BaM1.0.3bama1.3.0
bamdit3.4.0bamlss1.2-2
BAMMtools2.1.11bang1.0.3
BANOVA1.2.1BarcodingR1.0-3
BART2.9.6bartBMA1.0
bartCause1.0-6bartMachine1.3.4.1
bartMachineJARs1.2.1BAS1.7.1
basad0.3.0base642.0.1
base64enc0.1-3base64url1.4
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txtq0.2.4tzdb0.4.0
uaparserjs0.3.5ubiquity2.0.1
ucminf1.2.1UComp4.0.2
udpipe0.8.11ufRisk1.0.7
ugatsdb0.2.3uGMAR3.4.5
umap0.2.10.0uncmbb0.2.2
unglue0.1.0UnifiedDoseFinding0.1.10
units0.8-5univOutl0.4
unrepx1.0-2unrtf1.4.5
UpSetR1.4.0uptasticsearch0.4.0
urca1.3-3urlchecker1.0.1
urlshorteneR1.5.7urltools1.7.3
uroot2.1-3USA.state.boundaries1.0.1
usdata0.2.0usethis2.2.3
usmap0.7.0usmapdata0.2.1
utf81.2.4utility1.4.6
uuid1.2-0uwot0.1.16
V84.4.2VALERIE1.1.0
validate1.1.5validatetools0.5.2
valr0.7.0VAM1.1.0
vapour0.9.5VAR.etp1.1
varbvs2.6-10VARDetect0.1.6
vardiag0.2-1vardpoor0.20.1
VaRES1.0.2vars1.6-0
VARshrink0.3.1varycoef0.3.4
VCA1.5.0vcd1.4-12
vcdExtra0.8-5vcr1.2.2
vctrs0.6.5vdg1.2.2
VedicDateTime0.1.9vegan2.6-4
vegperiod0.4.0VennDiagram1.7.3
venneuler1.1-4VGAM1.1-10
VGAMdata1.1-9vglmer1.0.3
vhica0.2.8VIC50.2.6
VIM6.2.2VineCopula2.5.0
vines1.1.5vip0.4.1
viridis0.6.5viridisLite0.4.2
visNetwork2.1.2visualize4.5.0
vkR0.2volatilityTrader1.0.1
volcano3D2.0.9volleystat0.2.0
vpc1.2.2vroom1.6.5
vrtest1.2W3CMarkupValidator0.1-7
waiter0.2.5waldo0.5.2
warp0.2.1washdata0.1.3
WASP1.4.3waterData1.0.8
waterquality1.0.0Watersheds1.1
WaveletComp1.1wavelets0.3-0.2
WaveSampling0.1.3waveslim1.8.4
wavethresh4.7.2wavScalogram1.1.3
wbstats1.0.4wCorr1.9.8
WDI2.7.8wdman0.2.6
WebAnalytics0.9.12webchem1.3.0
webdriver1.0.6WebGestaltR0.4.6
webmockr0.9.0webreadr0.4.0
webshot0.5.5webshot20.1.1
websocket1.4.1webutils1.2.0
wehoop2.0.0WeightIt0.14.2
weights1.0.4welo0.1.3
WeMix4.0.3WGCNA1.72-5
WH1.1.0whisker0.4.1
whitebox2.3.4whitening1.4.0
whoami1.3.0widgetframe0.3.1
WikidataQueryServiceR1.0.0WikidataR2.3.3
wikipediatrend2.1.6WikipediR1.5.0
wikitaxa0.4.0wildlifeDI0.5.1
windex2.0.7wINEQ1.2.0
withr3.0.0wk0.9.1
wktmo1.0.5wkutils0.1.3
wnl0.8.0wooldridge1.4-3
worcs0.1.14word2vec0.4.0
wordcloud2.6wordnet0.1-16
workflowr1.7.1workflows1.1.4
workflowsets1.0.1worldfootballR0.6.2
worldmet0.9.8worrms0.4.3
wpp20171.2-3wpp20191.1-1
wql1.0.0WrightMap1.3
writexl1.5.0WriteXLS6.5.0
wrMisc1.14.2wrProteo1.11.0.1
WRSS3.1wrswoR1.1.1
WRTDStidal1.1.4WufooR1.0.1
x121.10.3x13binary1.1.60
xaringan0.29XBRL0.99.19.1
xfun0.42xgboost1.7.7.1
xgxr1.1.2XLConnect1.0.8
xlsx0.6.5xlsxjars0.6.1
XML3.99-0.16.1xml21.3.6
XML2R0.0.6xmlrpc21.1
xopen1.0.0xplain0.2.2
xpose0.4.18xpose.nlmixr20.4.0
xpose44.7.3xslt1.4.4
xtable1.8-4xts0.13.2
XVector0.40.0xxIRT2.1.2
yaImpute1.0-34yaml2.3.8
yardstick1.3.0yesno0.1.2
yhatr0.15.1yorkr0.0.41
ypssc1.1.0yuima1.15.27
yulab.utils0.1.4zeallot0.1.0
zen4R0.9zic0.9.1
ZIM1.1.0ZINARp0.1.0
zip2.3.1zipfR0.6-70
zlib1.0.3zlibbioc1.46.0
zoo1.8-12ZRA0.2
ztable0.2.3zTree1.0.7
zyp0.11-1

RStudio Server

R: 4.3.3

rstudio-server: 2023.12.0+369

CUDA Version: 11.7

GPU Driver Version: 515.43.04

Release Notes

Installed tensorflow CPU version.

R: 4.3.3; rstudio-server: 2023.12.0+369; CUDA Version: 11.7; GPU Driver Version: 515.43.04

This AMI provides thousands of R packages covering various domains such as data science, machine learning, economitrics, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, reproducible research, phylogenetics, web technologies, hydrology, sports analytics, natural language processing, actuarial science, optimization, genomics, proteomics, metabolomics, transcriptomics, and other omics.

R packages (4161)

packageversionpackageversion
abc2.2.1abc.data1.0
ABCoptim0.15.0abcrf1.9
abglasso0.1.1abind1.4-5
abtest1.0.1accrualPlot1.0.7
acebayes1.10acepack1.4.2
acp2.1acs2.1.4
ACSWR1.0ActivePathways2.0.3
actuar3.3-4actuaRE0.1.5
ActuarialM0.1.0actuaryr1.1.1
actxps1.4.0ada2.0-5
adagio0.9.2adaptivetau2.3
adaptMCMC1.5adaptr1.3.2
ADAPTS1.0.22adaptsmoFMRI1.2
adaptTest1.2additivityTests1.1-4.1
ade41.7-22ade4TkGUI0.3-1
adegenet2.1.10adegraphics1.0-21
adehabitatHR0.4.21adehabitatHS0.3.17
adehabitatLT0.3.27adehabitatMA0.3.16
adephylo1.1-16ADGofTest0.3
adimpro0.9.6adiv2.2.1
adjclust0.6.9admisc0.34
AdMit2.1.9ads1.5-10
AdvancedBasketballStats1.0.1AER1.2-12
affy1.78.0affyio1.70.0
africamonitor0.2.4agricolae1.3-7
agricolaeplotr0.5.0agridat1.23
agriwater1.0.2agvgd0.1.2
AhoCorasickTrie0.1.2airGR1.7.6
airGRdatassim0.1.3airGRiwrm0.6.2
airGRteaching0.3.2airports0.1.0
airr1.5.0ajv1.0.0
akima0.6-3.4alabama2023.1.0
alakazam1.3.0aLFQ1.3.6
AlgDesign1.2.1aliases2entrez0.1.2
almanac1.0.0alpaca0.3.4
alphavantager0.1.3ALTopt0.1.2
Amelia1.8.1AmericanCallOpt0.95
ammiBayes1.0-2ampir1.1.0
AMR2.1.1anabel3.0.1
AnaCoDa0.1.4.4anacor1.1-4
analogsea1.0.7.2anesrake0.80
animation2.7anipaths0.10.3
anMC0.2.5annotate1.78.0
AnnotationBustR1.3.0AnnotationDbi1.62.1
AnnuityRIR1.0-0Anthropometry1.19
anytime0.3.9ao0.3.3
aod1.3.3aoos0.5.0
AovBay0.1.0apc2.0.0
apcluster1.4.11ape5.7-1
APFr1.0.2aphid1.3.5
aphylo0.3-3aplot0.2.2
apollo0.3.1approximator1.2-8
apt3.0ARCensReg3.0.1
ArchaeoChron0.1ArchaeoPhases1.8
archetypes2.2-0.1archivist2.3.6
ArDec2.1-1ARDL0.2.4
ardl.nardl1.3.0areal0.1.8
arfima1.8-1argparse2.2.2
arm1.13-1aroma.apd0.7.0
arpr0.1.2arrangements1.1.9
arrow14.0.2.1ars0.6
aRxiv0.10ascii2.6
asd2.2ash1.0-15
ashr2.2-63AsioHeaders1.22.1-2
askpass1.2.0aspect1.0-6
ASSA2.0assertive.base0.0-9
assertive.files0.0-2assertive.numbers0.0-2
assertthat0.2.1AssetCorr1.0.4
astrochron1.2astsa2.1
asymmetry2.0.4ata1.1.1
atom4R0.3-3atRisk0.1.0
aTSA3.1.2.1attempt0.3.1
attention0.4.0AUC0.3.2
audio0.1-11autoFRK1.4.3
autoimage2.2.3automap1.1-9
autostsm3.1.3av0.9.0
aweek1.0.3aws2.5-5
aws.signature0.6.0awsMethods1.1-1
AzureAuth1.3.3AzureCognitive1.0.1
AzureContainers1.3.2AzureCosmosR1.0.0
AzureGraph1.3.4AzureKusto1.1.3
AzureQstor1.0.1AzureRMR2.4.4
AzureStor3.7.0AzureTableStor1.0.0
AzureVision1.0.2AzureVM2.2.2
babelgene22.9babelwhale1.2.0
BACCO2.1-0BACCT1.0
backports1.4.1backtest0.3-4
bacondecomp0.1.1baggr0.7.8
bain0.2.10BalancedSampling2.0.6
BaM1.0.3bama1.3.0
bamdit3.4.0bamlss1.2-2
BAMMtools2.1.11bang1.0.3
BANOVA1.2.1BarcodingR1.0-3
BART2.9.6bartBMA1.0
bartCause1.0-6bartMachine1.3.4.1
bartMachineJARs1.2.1BAS1.7.1
basad0.3.0base642.0.1
base64enc0.1-3base64url1.4
baseballDBR0.1.2basicMCMCplots0.2.7
BASiNET0.0.5BaSkePro1.1.1
BasketballAnalyzeR0.5.0BASS1.3.1
BatchExperiments1.4.3BatchJobs1.9
batchmeans1.0-4BAwiR1.3.2
baycn1.2.0bayefdr0.2.1
bayes4psy1.2.12bayesAB1.1.3
bayesammi0.1.0bayesanova1.5
BayesARIMAX0.1.1BayesBinMix1.4.1
bayesbio1.0.0bayesboot0.2.2
BayesBP1.1bayesbr0.0.1.0
BayesCACE1.2.3BayesCombo1.0
BayesComm0.1-2bayescopulareg0.1.3
bayescount0.9.99-9BayesCR2.1
bayesCT0.99.3BayesCTDesign0.6.1
BayesDA2012.04-1bayesDccGarch3.0.4
bayesdfa1.3.3bayesdistreg0.1.0
bayesDP1.3.6BayesFactor0.9.12-4.7
BayesFM0.1.5bayesforecast1.0.1
bayesGAM0.0.2bayesGARCH2.1.10
BayesGOF5.2BayesGPfit1.1.0
BayesGWQS0.1.1bayesian0.0.9
bayesianETAS1.0.3Bayesiangammareg0.1.0
BayesianGLasso0.2.0BayesianLaterality0.1.2
BayesianNetwork0.3BayesianTools0.1.8
bayesImageS0.6-1BayesLCA1.9
bayesLife5.2-0bayeslincom1.3.0
BayesLN0.2.10BayesLogit2.1
bayesloglin1.0.1bayeslongitudinal0.1.0
bayesm3.1-6BayesMallows2.0.1
BayesMassBal1.1.0bayesmeta3.4
bayesmix0.7-6bayesnec2.1.1.0
bayesplot1.11.1bayesQR2.4
BayesSAE1.0-2bayestestR0.13.2
bayesTFR7.4-2BayesTools0.2.17
BayesTree0.3-1.5BayesVarSel2.2.5
BayesX0.3-3BAYSTAR0.2-10
baytrends2.0.11BB2019.10-1
BBmisc1.13bbmle1.0.25.1
bbotk0.8.0BCBCSF1.0-1
BCC19970.1.1BCE2.2.0
Bchron4.7.6BClustLonG0.1.3
bcp4.0.3bcpa1.3.2
bcrm0.5.4BDgraph2.72
bdrc1.1.0bdsmatrix1.3-7
BE0.2.4beachmat2.16.0
beadarray2.50.0BeadDataPackR1.52.0
beakr0.4.3bearishTrader1.0.2
BED1.5.0beepr1.3
beeswarm0.4.0benchmarkme1.0.8
benchmarkmeData1.0.4BenfordTests1.2.0
bentcableAR0.3.1Bergm5.0.7
berryFunctions1.22.5Bessel0.6-0
BEST0.5.4BetaBit2.2
betafunctions1.8.1betapart1.6
betareg3.1-4betategarch3.3
BETS0.4.9bets.covid191.0.0
beyondWhittle1.2.0bezier1.1.2
bfast1.6.1BFpack1.2.3
BGGM2.1.1BGLR1.1.1
BGVAR2.5.5bgw0.1.2
BH1.84.0-0BHH22016.05.31
BiasCorrector0.2.2BiasedUrn2.0.11
bibtex0.5.1biclust2.0.3.1
bidask2.0.2bife0.7.2
BIFIEsurvey3.5-19biganalytics1.1.21
bigchess1.9.1bigD0.2.0
bigleaf0.8.2biglm0.9-2.1
bigmemory4.6.4bigmemory.sri0.1.8
bigrquery1.5.0bigsplines1.1-1
bigtime0.2.3BigVAR1.1.2
bimets3.0.2bindr0.1.1
bindrcpp0.2.3binman0.1.3
binom1.1-1.1binomSamSize0.1-5
binr1.1.1binseqtest1.0.4
bio3d2.4-4Biobase2.60.0
BiocFileCache2.8.0BiocGenerics0.46.0
BiocIO1.10.0BiocManager1.30.22
BiocParallel1.34.1BiocSingular1.16.0
BiocVersion3.17.1bioinactivation1.2.3
BioInsight0.3.1biomaRt2.56.1
biomartr1.0.7biomformat1.28.0
bioOED0.2.1bioseq0.1.4
Biostrings2.68.0biotic0.1.2
bipartite2.19birtr1.0.0
BisqueRNA1.0.5bit4.0.5
bit644.0.5bitops1.0-7
biwavelet0.20.21bizdays1.0.16
bkmr0.2.2blaise1.3.11
blastula0.3.5blavaan0.5-3
BLModel1.0.2blob1.2.4
blocklength0.1.5blockmatrix1.0
blockrand1.5blocksdesign4.9
blockTools0.6.4blogdown1.19
BLR1.6BMA3.18.17
bmgarch2.0.0BMisc1.4.5
bmixture1.7BMS0.3.5
BMTAR0.1.1bnlearn4.9.1
BNPTSclust2.0BNSP2.2.3
bnstruct1.0.15boa1.1.8-2
boilerpipeR1.3.2BOIN2.7.2
bold1.3.0Bolstad0.2-41
Bolstad21.0-29bondAnalyst1.0.1
bookdown0.37Boom0.9.15
BoomSpikeSlab1.2.6bootnet1.6
BootPR1.0bootstrap2019.6
bootUR1.0.3BoSSA3.7
boussinesq1.0.6boxr0.3.6
bpca1.3-6bqtl1.0-36
BradleyTerry21.1-2brainR1.6.0
brandwatchR0.3.0breakfast2.3
brew1.0-10brglm0.7.2
brglm20.9.2bridgesampling1.1-2
BRINDA0.1.5brio1.1.4
brms2.20.4Brobdingnag1.2-9
broman0.80broom1.0.5
broom.helpers1.14.0brotli1.3.0
bsam1.1.3bsamGP1.2.4
BSgenome1.68.0bslib0.6.1
BsMD2023.920bspec1.6
bspmma0.1-2bssm2.0.2
BSSprep0.1bsts0.9.10
bsvars2.1.0BTLLasso0.1-13
BTM0.3.7bullishTrader1.0.1
bundesbank0.1-11BurStFin1.3
BurStMisc1.1BVAR1.0.5
bvartools0.2.4bvls1.4
C500.1.8ca0.71.1
cabinets0.6.0cabootcrs2.1.0
cachem1.0.8cacIRT1.4
CADFtest0.3-3caffsim0.2.2
Cairo1.6-2CALANGO1.0.16
calculus1.0.1calibrate1.7.7
CalibrateSSB1.3.0calibrator1.2-8
callr3.7.5cancensus0.5.7
candisc0.8-6canprot1.1.2
CANSIM2R1.14.1caper1.0.3
captr0.3.0capushe1.1.2
car3.1-2caRamel1.3
CARBayes6.1CARBayesdata3.0
CARBayesST4.0carData3.0-5
caret6.0-94carfima2.0.2
caribou1.1-1carrier0.1.1
cartogram0.3.0Cascade2.1
CascadeData1.4CAST0.9.0
castor1.8.0cate1.1.1
caTools1.18.2catR3.17
causact0.5.4CausalImpact1.3.0
CAvariants6.0CB21.3.4
cbioportalR1.1.0cbsodataR1.0.1
ccaPP0.3.3cccp0.3-1
cdlTools0.15CDM8.2-6
CDNmoney2012.4-2cds1.0.3
CellNOptR1.46.0cellranger1.1.0
censReg0.5-36censusapi0.8.0
CEoptim1.3CePa0.8.0
CeRNASeek2.1.3cfbfastR1.9.0
CFtime1.3.0ChainLadder0.2.18
chandwich1.1.6changepoint2.2.4
changepoint.geo1.0.2changepoint.np1.0.5
checkLuhn1.1.0checkmate2.3.1
checkpoint1.0.2chem.databases1.0.0
ChemoSpec6.1.10ChemoSpecUtils1.0.4
cherryblossom0.1.0chess1.0.1
chilemapas0.3.0chk0.9.1
CHNOSZ2.1.0choiceDes0.9-3
CholWishart1.1.2choroplethr3.7.3
choroplethrMaps1.0.1chromoMap4.1.1
chromote0.2.0chron2.3-61
cifti0.4.5cinterpolate1.0.1
circlize0.4.16CircSpaceTime0.9.0
CircStats0.2-6circular0.5-0
ciTools0.6.1Ckmeans.1d.dp4.3.5
Claddis0.6.3clarabel0.5.1
clarifai0.4.2classInt0.4-10
cli3.6.2clifro3.2-5
climatol4.0.0clime0.5.0
clinDR2.4.1clinfun1.1.5
clinicalsignificance2.0.0clinPK0.13.0
clinsig1.2clipr0.8.0
clisymbols1.2.0clmplus0.1.0
clock0.7.0clubSandwich0.5.10
clue0.3-65clustDRM0.1-0
clusterGeneration1.3.8clusterPower0.7.0
clusterSEs2.6.5clustMixType0.3-14
ClustVarLV2.1.1clv0.3-2.4
cmaes1.0-12cmaesr1.0.3
CMLS1.0-1cmm1.0
cmocean0.3-1cmprsk2.2-11
cmrutils1.3.1cNORM3.0.4
CNORode1.42.0coalescentMCMC0.4-4
coalitions0.6.24coarseDataTools0.6-6
cobalt4.5.4cobs1.3-7
coconots1.1.3COCONUT1.0.2
cocor1.1-4cocorresp0.4-4
cocron1.0-1coda0.19-4.1
cOde1.1.1coin1.4-3
cointReg0.2.0colf0.1.3
collapse2.0.10collapsibleTree0.1.8
collections0.3.7colorr1.0.0
colorRamps2.3.1colorspace2.1-0
colourpicker1.3.0colourvalues0.3.9
combinat0.0-8combinedevents0.1.1
CombinS1.1-1ComICS1.0.4
CommonJavaJars1.0-6commonmark1.9.1
compare0.2-6compas0.1.1
CompQuadForm1.4.3comprehenr0.6.10
conditionz0.1.0coneproj1.17
conf.design2.0.0config0.3.2
confintr1.0.2conflicted1.2.0
conquer1.3.3conquestr1.3.0
contactdata1.0.0contfrac1.1-12
convevol2.0.1convey1.0.0
coop0.6-3cops1.3-1
copula1.1-3copulaData0.0-1
copulaedas1.4.3cordillera1.0-0
corHMM2.8coro1.0.3
corona0.3.0coronavirus0.4.1
corpcor1.6.10corpora0.6
corporaexplorer0.8.6corrgram1.14
corrplot0.92cosa2.1.0
CoSMoS2.1.0costat2.4.1
countrycode1.5.0CovCombR1.0
COVID193.0.3covid19.analytics2.1.3.3
covid19br0.1.8covid19dbcand0.1.1
covid19france0.1.0covid19italy0.3.1
covid19sf0.1.2covid19swiss0.1.0
covid19us0.1.9CovidMutations0.1.3
cowplot1.1.3cp4p0.3.6
CPBayes1.1.0cpk1.3-1
cplm0.7-12cpp110.4.7
CRABS1.2.0crawl2.3.0
crayon1.5.2crch1.1-2
credentials2.0.1credule0.1.4
crfsuite0.4.2cricketdata0.2.3
cricketr0.0.26CRM1.2.4
crmPack1.0.5crossdes1.1-2
Crossover0.1-21crosstalk1.2.1
crs0.15-37crseEventStudy1.2.2
crsmeta0.3.0crul1.4.0
crunch1.30.4crunchy0.3.3
cSEM0.5.0CSGo0.6.7
cshapes2.0csodata1.4.2
cstab0.2-2csv0.6.2
ctbi2.0.5ctmcmove1.2.9
ctmm1.2.0ctrdata1.17.2
ctsem3.9.1ctsemOMX1.0.6
CTT2.3.3CTTShiny0.1
ctv0.9-5cubature2.1.0
cubble0.3.0cubelyr1.0.2
cubfits0.1-4Cubist0.4.2.1
cumSeg1.3curl5.2.1
cvar0.5cvAUC1.1.4
CVST0.2-3CVXR1.0-12
d3Network0.5.2.1DAAG1.25.4
dae3.2.21daewr1.2-11
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sparseDFM1.0SparseFactorAnalysis1.0
sparseinv0.1.3SparseM1.81
sparseMatrixStats1.12.2sparseMVN0.2.2
sparsevar0.1.0spatgraphs3.4
spatialCovariance0.6-9SpatialEpi1.2.8
SpatialExtremes2.1-0SpatialPosition2.1.2
spatialprobit1.0.4spatialreg1.3-2
spatialsample0.5.1SpatialTools1.0.5
spatialwidget0.2.5spatstat3.0-7
spatstat.data3.0-4spatstat.explore3.2-6
spatstat.geom3.2-9spatstat.linnet3.1-4
spatstat.model3.2-10spatstat.random3.2-3
spatstat.sparse3.0-3spatstat.utils3.0-4
spBayes0.4-7spBayesSurv1.1.8
Spbsampling1.3.5spd2.0-1
spData2.3.0spdep1.3-3
spec0.1.9spectral2.0
speff2trial1.0.5SPEI1.8.1
spelling2.2.1sperrorest3.0.5
sphet2.0spiderbar0.2.5
spikeslab1.1.6spikeSlabGAM1.1-19
spINAR0.1.0spind2.2.1
splancs2.01-44SPLICE1.1.2
splines20.5.1splm1.6-5
spls2.2-3splus2R1.3-5
spmodel0.5.1spmoran0.2.3
SportsTour0.1.0sportyR2.2.2
SPOT2.11.14SpotSampling0.1.0
spselect0.0.1spsur1.0.2.5
spsurvey5.5.1spTimer3.3.2
sptotal1.0.1sqldf0.4-11
SqlRender1.16.1SQRL1.0.2
SQUAREM2021.1srvyr1.2.0
ssanv1.1SSBtools1.5.0
ssfa1.2.2ssgraph1.15
ssize.fdr1.3ssizeRNA1.3.2
ssMousetrack1.1.6ssmrob1.0
SSN1.1.17stable1.1.6
stabledist0.7-1stabs0.6-4
staggered1.1stampr0.3.1
StanHeaders2.32.6StanMoMo1.2.0
stargazer5.2.3starma1.3
stars0.6-4starter0.1.14
STARTS1.3-8startupmsg0.9.6.1
statcanR0.2.6statcodelists0.9.2
statebins1.4.0statespacer0.5.0
stationaRy0.5.1statip0.2.3
StatMatch1.4.1statmod1.5.0
statnet.common4.9.0StatRank0.0.6
steadyICA1.0SteinIV0.1-1
STFTS0.1.0stinepack1.4
stlplus0.5.1stm1.3.7
STMedianPolish0.2StMoMo0.4.1
stochprofML2.0.3stochQN0.1.2-1
stochvol3.2.4stockAnalyst1.0.1
stopwords2.3storr1.2.5
stplanr1.1.2stR0.6
strand0.2.0strap1.6-0
stratification2.2-7streamDepletr0.2.0
streamR0.4.5stringdist0.9.12
stringfish0.16.0stringi1.8.3
stringmagic1.0.0stringr1.5.1
strucchange1.5-3strucchangeRcpp1.5-3-1.0.4
StructuralDecompose0.1.1styler1.10.2
subplex1.8subscore3.3
sufficientForecasting0.1.0sugrrants0.2.8
SummarizedExperiment1.30.2summclust0.7.2
suntools1.0.0supclust1.1-1
SuperLearner2.0-29superml0.5.7
superpc1.12SuppDists1.1-9.7
support.CEs0.7-0surface0.5
SurrogateRegression0.6.0.1suRtex0.9
survcomp1.50.0surveillance1.22.1
survey4.2-1surveybootstrap0.0.3
surveydata0.2.7surveyoutliers0.1
surveyplanning4.0surveysd1.3.1
survival6660.5survivalROC1.0.3.1
survminer0.4.9survMisc0.5.6
survPresmooth1.1-11sva3.48.0
svars1.3.11svd0.5.5
svDialogs1.1.0SVDNF0.1.8
svglite2.1.3svGUI1.0.1
svrep0.6.3svs3.0.0
svUnit1.0.6swagger3.33.1
swephR0.3.1SwimmeR0.14.2
swirl2.4.5swirlify0.5.3
switchr0.14.8sylly0.1-6
sym.arma1.0symengine0.2.6
symmoments1.2.1SYNCSA1.3.4
Synth1.1-8synthACS1.7.1
synthesis1.2.4SynthETIC1.1.0
synthpop1.8-0sys3.4.2
sysfonts0.8.9systemfit1.1-30
systemfonts1.0.5table11.4.3
tables0.9.17tabnet0.5.0
tabuSearch1.1.1TAF4.2.0
tagcloud0.6TailRank3.2.2
TAM4.2-21TAQMNGR2018.5-1
targets1.5.1tau0.0-25
taxize0.9.100TBRDist1.0.2
tbrf0.1.5TCA1.2.1
TcGSA0.12.10tcltk21.2-11
Tcomp1.0.1tdigest0.4.1
TeachingDemos2.13teamcolors0.0.4
telegram.bot3.0.0telemac0.1.1
tempdisagg1.1.1tensor1.5
tensorA0.36.2.1tensorflow2.15.0
TensorPreAve1.1.0tensorTS1.0.1
TEQR6.0-0tergm4.2.0
Ternary2.3.1terra1.7-71
TESS2.1.2tesseract5.2.1
testcorr0.2.0TestDataImputation2.3
TestDesign1.5.1tester0.1.7
TestFunctions0.2.1testit0.13
TestScorer1.7.2testthat3.2.1
TexExamRandomizer1.2.7texreg1.39.3
text2vec0.6.4textcat1.0-8
textir2.0-5textplot0.2.2
textrank0.3.1textreuse0.1.5
textshaping0.3.7textTinyR1.1.8
tfarima0.3.2tfautograph0.3.2
tfdatasets2.9.0tfio0.4.1
TFisher0.2.0tfplot2021.6-1
tframe2015.12-1.1tfruns1.5.2
tgp2.4-22TH.data1.1-2
theft0.5.4.1thief0.3
ThreeArmedTrials1.0-4threeBrain1.0.1
ThreeGroups0.21threejs0.3.3
ThreeWay1.1.3thurstonianIRT0.12.4
tibble3.2.1tibbletime0.1.8
tictoc1.2Tides2.1
tidyBdE0.3.5tidycensus1.6
tidyestimate1.1.1tidygraph1.3.1
tidyhydat0.6.1tidyLPA1.1.0
tidymodels1.1.1tidyquant1.0.7
tidyqwi0.1.2tidyr1.3.1
tidyREDCap1.1.1tidyRSS2.0.7
tidyselect1.2.0tidysynth0.2.0
tidytable0.11.0tidytext0.4.1
tidytree0.4.6tidyverse2.0.0
tiff0.1-12tigris2.1
tikzDevice0.12.6timechange0.3.0
timeDate4032.109timeSeries4032.109
timeseriesdb1.0.0-1.1.2timetk2.9.0
timsac1.3.8-4tinyProject0.6.1
tinytable0.0.5tinytex0.49
tis1.39tkrplot0.0-27
TLMoments0.7.5.3tm0.7-11
tm.plugin.alceste1.1tm.plugin.dc0.2-10
tm.plugin.europresse1.4tm.plugin.factiva1.8
tm.plugin.lexisnexis1.4.1tm.plugin.mail0.2-2
tmap3.3-4tmaptools3.1-1
TMB1.9.10Tmisc1.0.1
tmod0.50.13tmvnsim1.0-2
tmvtnorm1.6tnet3.0.16
tokenizers0.3.0tokenizers.bpe0.1.3
toOrdinal1.3-0.0topicdoc0.1.1
topicmodels0.2-16topicmodels.etm0.1.0
topmodel0.7.5toprdata1.0.2
torch0.12.0torchaudio0.3.1.9000
torchdatasets0.3.0torchvision0.5.1
tpr0.3-3tracerer2.2.3
trackdem0.6trackdf0.3.3
trackdown1.1.1trackeR1.6.0
trackeRapp1.2TrackReconstruction1.3
tractor.base3.4.2traipse0.3.0
trajectories0.2-8TrajectoryUtils1.8.0
trajr1.5.1transformr0.1.5
transfR1.0.11TransPhylo1.4.5
trapezoid2.0-2traudem1.0.2
tree1.0-43treebase0.1.5
TreeBUGS1.5.0treedater0.5.0
TreeDist2.7.0treefit1.0.2
treeio1.24.0treemap2.4-4
TreeSearch1.4.0TreeSim2.4
treespace1.1.4.3TreeTools1.10.0
trend1.1.6trendeval0.1.0
trending0.1.0TrialSize1.4
triangle1.0triebeard0.4.1
trimcluster0.1-5trip1.10.0
tripack1.3-9.1tripEstimation0.0-46
TripleR1.5.4TruncatedNormal2.2.2
truncdist1.0-2truncnorm1.0-9
truncreg0.2-5trust0.1-8
trustOptim0.8.7.3TSA1.3.1
TSANN0.1.0tsbox0.4.1
tsBSS1.0.0TSCAN1.38.0
TSclust1.3.1tscount1.4.3
tsdb1.1-0tsdecomp0.2
TSdeeplearning0.1.0tsdisagg20.1.0
TSdisaggregation2.0.0TSdist3.7.1
tsDyn11.0.4.1TSEntropies0.9
tseries0.10-55tseriesChaos0.1-13.1
tseriesEntropy0.7-2tseriesTARMA0.3-4
tsfeatures1.1.1tsfknn0.6.0
tsibble1.1.4tsibbledata0.4.1
tsibbletalk0.1.0tsintermittent1.10
tsiR0.4.3TSLSTM0.1.0
tsModel0.6-1tsne0.1-3.1
tsoutliers0.6-10TSP1.2-4
tsPI1.0.4TSrepr1.1.0
tsrobprep0.3.2tssim0.1.7
TSstudio0.1.7TSTutorial1.2.7
tsutils0.9.4tswge2.1.0
tth4.12-0-1TTR0.24.4
tufterhandout1.2.1tune1.1.2
turner0.1.7TUWmodel1.1-1
tvm0.5.2tweedie2.3.5
tweenr2.0.3twosamples2.0.1
TxDb.Hsapiens.UCSC.hg19.knownGene3.2.2TxDb.Hsapiens.UCSC.hg38.knownGene3.17.0
txtq0.2.4tzdb0.4.0
uaparserjs0.3.5ubiquity2.0.1
ucminf1.2.1UComp4.0.2
udpipe0.8.11ufRisk1.0.7
ugatsdb0.2.3uGMAR3.4.5
umap0.2.10.0uncmbb0.2.2
unglue0.1.0UnifiedDoseFinding0.1.10
units0.8-5univOutl0.4
unrepx1.0-2unrtf1.4.5
UpSetR1.4.0uptasticsearch0.4.0
urca1.3-3urlchecker1.0.1
urlshorteneR1.5.7urltools1.7.3
uroot2.1-3USA.state.boundaries1.0.1
usdata0.2.0usethis2.2.3
usmap0.7.0usmapdata0.2.1
utf81.2.4utility1.4.6
uuid1.2-0uwot0.1.16
V84.4.2VALERIE1.1.0
validate1.1.5validatetools0.5.2
valr0.7.0VAM1.1.0
vapour0.9.5VAR.etp1.1
varbvs2.6-10VARDetect0.1.6
vardiag0.2-1vardpoor0.20.1
VaRES1.0.2vars1.6-0
VARshrink0.3.1varycoef0.3.4
VCA1.5.0vcd1.4-12
vcdExtra0.8-5vcr1.2.2
vctrs0.6.5vdg1.2.2
VedicDateTime0.1.9vegan2.6-4
vegperiod0.4.0VennDiagram1.7.3
venneuler1.1-4VGAM1.1-10
VGAMdata1.1-9vglmer1.0.3
vhica0.2.8VIC50.2.6
VIM6.2.2VineCopula2.5.0
vines1.1.5vip0.4.1
viridis0.6.5viridisLite0.4.2
visNetwork2.1.2visualize4.5.0
vkR0.2volatilityTrader1.0.1
volcano3D2.0.9volleystat0.2.0
vpc1.2.2vroom1.6.5
vrtest1.2W3CMarkupValidator0.1-7
waiter0.2.5waldo0.5.2
warp0.2.1washdata0.1.3
WASP1.4.3waterData1.0.8
waterquality1.0.0Watersheds1.1
WaveletComp1.1wavelets0.3-0.2
WaveSampling0.1.3waveslim1.8.4
wavethresh4.7.2wavScalogram1.1.3
wbstats1.0.4wCorr1.9.8
WDI2.7.8wdman0.2.6
WebAnalytics0.9.12webchem1.3.0
webdriver1.0.6WebGestaltR0.4.6
webmockr0.9.0webreadr0.4.0
webshot0.5.5webshot20.1.1
websocket1.4.1webutils1.2.0
wehoop2.0.0WeightIt0.14.2
weights1.0.4welo0.1.3
WeMix4.0.3WGCNA1.72-5
WH1.1.0whisker0.4.1
whitebox2.3.4whitening1.4.0
whoami1.3.0widgetframe0.3.1
WikidataQueryServiceR1.0.0WikidataR2.3.3
wikipediatrend2.1.6WikipediR1.5.0
wikitaxa0.4.0wildlifeDI0.5.1
windex2.0.7wINEQ1.2.0
withr3.0.0wk0.9.1
wktmo1.0.5wkutils0.1.3
wnl0.8.0wooldridge1.4-3
worcs0.1.14word2vec0.4.0
wordcloud2.6wordnet0.1-16
workflowr1.7.1workflows1.1.4
workflowsets1.0.1worldfootballR0.6.2
worldmet0.9.8worrms0.4.3
wpp20171.2-3wpp20191.1-1
wql1.0.0WrightMap1.3
writexl1.5.0WriteXLS6.5.0
wrMisc1.14.2wrProteo1.11.0.1
WRSS3.1wrswoR1.1.1
WRTDStidal1.1.4WufooR1.0.1
x121.10.3x13binary1.1.60
xaringan0.29XBRL0.99.19.1
xfun0.42xgboost1.7.7.1
xgxr1.1.2XLConnect1.0.8
xlsx0.6.5xlsxjars0.6.1
XML3.99-0.16.1xml21.3.6
XML2R0.0.6xmlrpc21.1
xopen1.0.0xplain0.2.2
xpose0.4.18xpose.nlmixr20.4.0
xpose44.7.3xslt1.4.4
xtable1.8-4xts0.13.2
XVector0.40.0xxIRT2.1.2
yaImpute1.0-34yaml2.3.8
yardstick1.3.0yesno0.1.2
yhatr0.15.1yorkr0.0.41
ypssc1.1.0yuima1.15.27
yulab.utils0.1.4zeallot0.1.0
zen4R0.9zic0.9.1
ZIM1.1.0ZINARp0.1.0
zip2.3.1zipfR0.6-70
zlib1.0.3zlibbioc1.46.0
zoo1.8-12ZRA0.2
ztable0.2.3zTree1.0.7
zyp0.11-1

RStudio Server

R: 4.3.3

rstudio-server: 2023.12.0+369

CUDA Version: 11.7

GPU Driver Version: 515.43.04

Release Notes

Upgraded R to version 4.3.3 and all R packages to their latest versions.

R: 4.3.3; rstudio-server: 2023.12.0+369; CUDA Version: 11.7; GPU Driver Version: 515.43.04

This AMI provides thousands of R packages covering various domains such as data science, machine learning, economitrics, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, reproducible research, phylogenetics, web technologies, hydrology, sports analytics, natural language processing, actuarial science, optimization, genomics, proteomics, metabolomics, transcriptomics, and other omics.

R packages (4161)

packageversionpackageversion
abc2.2.1abc.data1.0
ABCoptim0.15.0abcrf1.9
abglasso0.1.1abind1.4-5
abtest1.0.1accrualPlot1.0.7
acebayes1.10acepack1.4.2
acp2.1acs2.1.4
ACSWR1.0ActivePathways2.0.3
actuar3.3-4actuaRE0.1.5
ActuarialM0.1.0actuaryr1.1.1
actxps1.4.0ada2.0-5
adagio0.9.2adaptivetau2.3
adaptMCMC1.5adaptr1.3.2
ADAPTS1.0.22adaptsmoFMRI1.2
adaptTest1.2additivityTests1.1-4.1
ade41.7-22ade4TkGUI0.3-1
adegenet2.1.10adegraphics1.0-21
adehabitatHR0.4.21adehabitatHS0.3.17
adehabitatLT0.3.27adehabitatMA0.3.16
adephylo1.1-16ADGofTest0.3
adimpro0.9.6adiv2.2.1
adjclust0.6.9admisc0.34
AdMit2.1.9ads1.5-10
AdvancedBasketballStats1.0.1AER1.2-12
affy1.78.0affyio1.70.0
africamonitor0.2.4agricolae1.3-7
agricolaeplotr0.5.0agridat1.23
agriwater1.0.2agvgd0.1.2
AhoCorasickTrie0.1.2airGR1.7.6
airGRdatassim0.1.3airGRiwrm0.6.2
airGRteaching0.3.2airports0.1.0
airr1.5.0ajv1.0.0
akima0.6-3.4alabama2023.1.0
alakazam1.3.0aLFQ1.3.6
AlgDesign1.2.1aliases2entrez0.1.2
almanac1.0.0alpaca0.3.4
alphavantager0.1.3ALTopt0.1.2
Amelia1.8.1AmericanCallOpt0.95
ammiBayes1.0-2ampir1.1.0
AMR2.1.1anabel3.0.1
AnaCoDa0.1.4.4anacor1.1-4
analogsea1.0.7.2anesrake0.80
animation2.7anipaths0.10.3
anMC0.2.5annotate1.78.0
AnnotationBustR1.3.0AnnotationDbi1.62.1
AnnuityRIR1.0-0Anthropometry1.19
anytime0.3.9ao0.3.3
aod1.3.3aoos0.5.0
AovBay0.1.0apc2.0.0
apcluster1.4.11ape5.7-1
APFr1.0.2aphid1.3.5
aphylo0.3-3aplot0.2.2
apollo0.3.1approximator1.2-8
apt3.0ARCensReg3.0.1
ArchaeoChron0.1ArchaeoPhases1.8
archetypes2.2-0.1archivist2.3.6
ArDec2.1-1ARDL0.2.4
ardl.nardl1.3.0areal0.1.8
arfima1.8-1argparse2.2.2
arm1.13-1aroma.apd0.7.0
arpr0.1.2arrangements1.1.9
arrow14.0.2.1ars0.6
aRxiv0.10ascii2.6
asd2.2ash1.0-15
ashr2.2-63AsioHeaders1.22.1-2
askpass1.2.0aspect1.0-6
ASSA2.0assertive.base0.0-9
assertive.files0.0-2assertive.numbers0.0-2
assertthat0.2.1AssetCorr1.0.4
astrochron1.2astsa2.1
asymmetry2.0.4ata1.1.1
atom4R0.3-3atRisk0.1.0
aTSA3.1.2.1attempt0.3.1
attention0.4.0AUC0.3.2
audio0.1-11autoFRK1.4.3
autoimage2.2.3automap1.1-9
autostsm3.1.3av0.9.0
aweek1.0.3aws2.5-5
aws.signature0.6.0awsMethods1.1-1
AzureAuth1.3.3AzureCognitive1.0.1
AzureContainers1.3.2AzureCosmosR1.0.0
AzureGraph1.3.4AzureKusto1.1.3
AzureQstor1.0.1AzureRMR2.4.4
AzureStor3.7.0AzureTableStor1.0.0
AzureVision1.0.2AzureVM2.2.2
babelgene22.9babelwhale1.2.0
BACCO2.1-0BACCT1.0
backports1.4.1backtest0.3-4
bacondecomp0.1.1baggr0.7.8
bain0.2.10BalancedSampling2.0.6
BaM1.0.3bama1.3.0
bamdit3.4.0bamlss1.2-2
BAMMtools2.1.11bang1.0.3
BANOVA1.2.1BarcodingR1.0-3
BART2.9.6bartBMA1.0
bartCause1.0-6bartMachine1.3.4.1
bartMachineJARs1.2.1BAS1.7.1
basad0.3.0base642.0.1
base64enc0.1-3base64url1.4
baseballDBR0.1.2basicMCMCplots0.2.7
BASiNET0.0.5BaSkePro1.1.1
BasketballAnalyzeR0.5.0BASS1.3.1
BatchExperiments1.4.3BatchJobs1.9
batchmeans1.0-4BAwiR1.3.2
baycn1.2.0bayefdr0.2.1
bayes4psy1.2.12bayesAB1.1.3
bayesammi0.1.0bayesanova1.5
BayesARIMAX0.1.1BayesBinMix1.4.1
bayesbio1.0.0bayesboot0.2.2
BayesBP1.1bayesbr0.0.1.0
BayesCACE1.2.3BayesCombo1.0
BayesComm0.1-2bayescopulareg0.1.3
bayescount0.9.99-9BayesCR2.1
bayesCT0.99.3BayesCTDesign0.6.1
BayesDA2012.04-1bayesDccGarch3.0.4
bayesdfa1.3.3bayesdistreg0.1.0
bayesDP1.3.6BayesFactor0.9.12-4.7
BayesFM0.1.5bayesforecast1.0.1
bayesGAM0.0.2bayesGARCH2.1.10
BayesGOF5.2BayesGPfit1.1.0
BayesGWQS0.1.1bayesian0.0.9
bayesianETAS1.0.3Bayesiangammareg0.1.0
BayesianGLasso0.2.0BayesianLaterality0.1.2
BayesianNetwork0.3BayesianTools0.1.8
bayesImageS0.6-1BayesLCA1.9
bayesLife5.2-0bayeslincom1.3.0
BayesLN0.2.10BayesLogit2.1
bayesloglin1.0.1bayeslongitudinal0.1.0
bayesm3.1-6BayesMallows2.0.1
BayesMassBal1.1.0bayesmeta3.4
bayesmix0.7-6bayesnec2.1.1.0
bayesplot1.11.1bayesQR2.4
BayesSAE1.0-2bayestestR0.13.2
bayesTFR7.4-2BayesTools0.2.17
BayesTree0.3-1.5BayesVarSel2.2.5
BayesX0.3-3BAYSTAR0.2-10
baytrends2.0.11BB2019.10-1
BBmisc1.13bbmle1.0.25.1
bbotk0.8.0BCBCSF1.0-1
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Bchron4.7.6BClustLonG0.1.3
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warp0.2.1washdata0.1.3
WASP1.4.3waterData1.0.8
waterquality1.0.0Watersheds1.1
WaveletComp1.1wavelets0.3-0.2
WaveSampling0.1.3waveslim1.8.4
wavethresh4.7.2wavScalogram1.1.3
wbstats1.0.4wCorr1.9.8
WDI2.7.8wdman0.2.6
WebAnalytics0.9.12webchem1.3.0
webdriver1.0.6WebGestaltR0.4.6
webmockr0.9.0webreadr0.4.0
webshot0.5.5webshot20.1.1
websocket1.4.1webutils1.2.0
wehoop2.0.0WeightIt0.14.2
weights1.0.4welo0.1.3
WeMix4.0.3WGCNA1.72-5
WH1.1.0whisker0.4.1
whitebox2.3.4whitening1.4.0
whoami1.3.0widgetframe0.3.1
WikidataQueryServiceR1.0.0WikidataR2.3.3
wikipediatrend2.1.6WikipediR1.5.0
wikitaxa0.4.0wildlifeDI0.5.1
windex2.0.7wINEQ1.2.0
withr3.0.0wk0.9.1
wktmo1.0.5wkutils0.1.3
wnl0.8.0wooldridge1.4-3
worcs0.1.14word2vec0.4.0
wordcloud2.6wordnet0.1-16
workflowr1.7.1workflows1.1.4
workflowsets1.0.1worldfootballR0.6.2
worldmet0.9.8worrms0.4.3
wpp20171.2-3wpp20191.1-1
wql1.0.0WrightMap1.3
writexl1.5.0WriteXLS6.5.0
wrMisc1.14.2wrProteo1.11.0.1
WRSS3.1wrswoR1.1.1
WRTDStidal1.1.4WufooR1.0.1
x121.10.3x13binary1.1.60
xaringan0.29XBRL0.99.19.1
xfun0.42xgboost1.7.7.1
xgxr1.1.2XLConnect1.0.8
xlsx0.6.5xlsxjars0.6.1
XML3.99-0.16.1xml21.3.6
XML2R0.0.6xmlrpc21.1
xopen1.0.0xplain0.2.2
xpose0.4.18xpose.nlmixr20.4.0
xpose44.7.3xslt1.4.4
xtable1.8-4xts0.13.2
XVector0.40.0xxIRT2.1.2
yaImpute1.0-34yaml2.3.8
yardstick1.3.0yesno0.1.2
yhatr0.15.1yorkr0.0.41
ypssc1.1.0yuima1.15.27
yulab.utils0.1.4zeallot0.1.0
zen4R0.9zic0.9.1
ZIM1.1.0ZINARp0.1.0
zip2.3.1zipfR0.6-70
zlib1.0.3zlibbioc1.46.0
zoo1.8-12ZRA0.2
ztable0.2.3zTree1.0.7
zyp0.11-1

RStudio Server

R: 4.3.2

rstudio-server: 2023.12.0+369

CUDA Version: 11.7

GPU Driver Version: 515.43.04

Release Notes

Applied security patching and updated all R packages to their latest versions. Additionally, included essential R packages for Actuarial Science, Optimization, Genomics, Proteomics, Metabolomics, Transcriptomics, and other Omics.

R: 4.3.2; rstudio-server: 2023.12.0+369; CUDA Version: 11.7; GPU Driver Version: 515.43.04

This AMI provides thousands of R packages covering various domains such as data science, machine learning, economitrics, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, reproducible research, phylogenetics, web technologies, hydrology, sports analytics, natural language processing, actuarial science, optimization, genomics, proteomics, metabolomics, transcriptomics, and other omics.

R packages (4156)

packageversionpackageversion
abc2.2.1abc.data1.0
ABCoptim0.15.0abcrf1.9
abglasso0.1.1abind1.4-5
abtest1.0.1accrualPlot1.0.7
acebayes1.10acepack1.4.2
acp2.1acs2.1.4
ACSWR1.0ActivePathways2.0.3
actuar3.3-4actuaRE0.1.5
ActuarialM0.1.0actuaryr1.1.1
actxps1.4.0ada2.0-5
adagio0.9.2adaptivetau2.3
adaptMCMC1.5adaptr1.3.2
ADAPTS1.0.22adaptsmoFMRI1.2
adaptTest1.2additivityTests1.1-4.1
ade41.7-22ade4TkGUI0.3-1
adegenet2.1.10adegraphics1.0-21
adehabitatHR0.4.21adehabitatHS0.3.17
adehabitatLT0.3.27adehabitatMA0.3.16
adephylo1.1-16ADGofTest0.3
adimpro0.9.6adiv2.2
adjclust0.6.8admisc0.34
AdMit2.1.9ads1.5-10
AdvancedBasketballStats1.0.1AER1.2-10
affy1.78.0affyio1.70.0
africamonitor0.2.4agricolae1.3-7
agricolaeplotr0.5.0agridat1.22
agriwater1.0.2agvgd0.1.2
AhoCorasickTrie0.1.2airGR1.7.6
airGRdatassim0.1.3airGRiwrm0.6.2
airGRteaching0.3.2airports0.1.0
airr1.5.0ajv1.0.0
akima0.6-3.4alabama2023.1.0
alakazam1.3.0aLFQ1.3.6
AlgDesign1.2.1aliases2entrez0.1.2
almanac1.0.0alpaca0.3.4
alphavantager0.1.3ALTopt0.1.2
Amelia1.8.1AmericanCallOpt0.95
ammiBayes1.0-1ampir1.1.0
AMR2.1.1anabel3.0.1
AnaCoDa0.1.4.4anacor1.1-4
analogsea1.0.7.2anesrake0.80
animation2.7anipaths0.10.2
anMC0.2.5annotate1.78.0
AnnotationBustR1.3.0AnnotationDbi1.62.1
AnnuityRIR1.0-0Anthropometry1.19
anytime0.3.9ao0.3.1
aod1.3.3aoos0.5.0
AovBay0.1.0apc2.0.0
apcluster1.4.11ape5.7-1
APFr1.0.2aphid1.3.5
aphylo0.3-3aplot0.2.2
apollo0.3.1approximator1.2-8
apt3.0ARCensReg3.0.1
ArchaeoChron0.1ArchaeoPhases1.8
archetypes2.2-0.1archivist2.3.6
ArDec2.1-1ARDL0.2.4
ardl.nardl1.3.0areal0.1.8
arfima1.8-1argparse2.2.2
arm1.13-1aroma.apd0.7.0
arpr0.1.2arrangements1.1.9
arrow14.0.0.2ars0.6
aRxiv0.8ascii2.6
asd2.2ash1.0-15
ashr2.2-63AsioHeaders1.22.1-2
askpass1.2.0aspect1.0-6
ASSA2.0assertive.base0.0-9
assertive.files0.0-2assertive.numbers0.0-2
assertthat0.2.1AssetCorr1.0.4
astrochron1.2astsa2.1
asymmetry2.0.4ata1.1.1
atom4R0.3-3atRisk0.1.0
aTSA3.1.2attempt0.3.1
attention0.4.0AUC0.3.2
audio0.1-11autoFRK1.4.3
autoimage2.2.3automap1.1-9
autostsm3.1.2av0.9.0
aweek1.0.3aws2.5-3
aws.signature0.6.0awsMethods1.1-1
AzureAuth1.3.3AzureCognitive1.0.1
AzureContainers1.3.2AzureCosmosR1.0.0
AzureGraph1.3.4AzureKusto1.1.3
AzureQstor1.0.1AzureRMR2.4.4
AzureStor3.7.0AzureTableStor1.0.0
AzureVision1.0.2AzureVM2.2.2
babelgene22.9babelwhale1.2.0
BACCO2.1-0BACCT1.0
backports1.4.1backtest0.3-4
bacondecomp0.1.1baggr0.7.6
bain0.2.10BalancedSampling1.6.3
BaM1.0.3bama1.3.0
bamdit3.4.0bamlss1.2-2
BAMMtools2.1.11bang1.0.3
BANOVA1.2.1BarcodingR1.0-3
BART2.9.6bartBMA1.0
bartCause1.0-6bartMachine1.3.4.1
bartMachineJARs1.2.1BAS1.7.1
basad0.3.0base642.0.1
base64enc0.1-3base64url1.4
baseballDBR0.1.2basicMCMCplots0.2.7
BASiNET0.0.5BaSkePro1.1.1
BasketballAnalyzeR0.5.0BASS1.3.1
BatchExperiments1.4.3BatchJobs1.9
batchmeans1.0-4BAwiR1.3.2
baycn1.2.0bayefdr0.2.1
bayes4psy1.2.12bayesAB1.1.3
bayesammi0.1.0bayesanova1.5
BayesARIMAX0.1.1BayesBinMix1.4.1
bayesbio1.0.0bayesboot0.2.2
BayesBP1.1bayesbr0.0.1.0
BayesCACE1.2.3BayesCombo1.0
BayesComm0.1-2bayescopulareg0.1.3
bayescount0.9.99-9BayesCR2.1
bayesCT0.99.3BayesCTDesign0.6.1
BayesDA2012.04-1bayesDccGarch3.0.4
bayesdfa1.3.2bayesdistreg0.1.0
bayesDP1.3.6BayesFactor0.9.12-4.7
BayesFM0.1.5bayesforecast1.0.1
bayesGAM0.0.2bayesGARCH2.1.10
BayesGOF5.2BayesGPfit1.1.0
BayesGWQS0.1.1bayesian0.0.9
bayesianETAS1.0.3Bayesiangammareg0.1.0
BayesianGLasso0.2.0BayesianLaterality0.1.2
BayesianNetwork0.3BayesianTools0.1.8
bayesImageS0.6-1BayesLCA1.9
bayesLife5.2-0bayeslincom1.3.0
BayesLN0.2.10BayesLogit2.1
bayesloglin1.0.1bayeslongitudinal0.1.0
bayesm3.1-6BayesMallows2.0.1
BayesMassBal1.1.0bayesmeta3.3
bayesmix0.7-6bayesnec2.1.1.0
bayesplot1.11.0bayesQR2.4
BayesSAE1.0-2bayestestR0.13.1
bayesTFR7.4-2BayesTools0.2.16
BayesTree0.3-1.5BayesVarSel2.2.5
BayesX0.3-3BAYSTAR0.2-10
baytrends2.0.9BB2019.10-1
BBmisc1.13bbmle1.0.25.1
bbotk0.7.3BCBCSF1.0-1
BCC19970.1.1BCE2.2.0
Bchron4.7.6BClustLonG0.1.3
bcp4.0.3bcpa1.3.2
bcrm0.5.4BDgraph2.72
bdrc1.1.0bdsmatrix1.3-6
BE0.2.4beachmat2.16.0
beadarray2.50.0BeadDataPackR1.52.0
beakr0.4.3bearishTrader1.0.2
BED1.5.0beepr1.3
beeswarm0.4.0benchmarkme1.0.8
benchmarkmeData1.0.4BenfordTests1.2.0
bentcableAR0.3.1Bergm5.0.7
berryFunctions1.22.0Bessel0.6-0
BEST0.5.4BetaBit2.2
betafunctions1.8.1betapart1.6
betareg3.1-4betategarch3.3
BETS0.4.9bets.covid191.0.0
beyondWhittle1.2.0bezier1.1.2
bfast1.6.1BFpack1.2.3
BGGM2.0.4BGLR1.1.1
BGVAR2.5.5bgw0.1.2
BH1.84.0-0BHH22016.05.31
BiasCorrector0.2.2BiasedUrn2.0.11
bibtex0.5.1biclust2.0.3.1
bidask2.0.2bife0.7.2
BIFIEsurvey3.4-15biganalytics1.1.21
bigchess1.9.1bigD0.2.0
bigleaf0.8.2biglm0.9-2.1
bigmemory4.6.4bigmemory.sri0.1.8
bigrquery1.5.0bigsplines1.1-1
bigtime0.2.3BigVAR1.1.2
bimets3.0.2bindr0.1.1
bindrcpp0.2.3binman0.1.3
binom1.1-1.1binomSamSize0.1-5
binr1.1.1binseqtest1.0.4
bio3d2.4-4Biobase2.60.0
BiocFileCache2.8.0BiocGenerics0.46.0
BiocIO1.10.0BiocManager1.30.22
BiocParallel1.34.1BiocSingular1.16.0
BiocVersion3.17.1bioinactivation1.2.3
BioInsight0.3.1biomaRt2.56.1
biomartr1.0.7biomformat1.28.0
bioOED0.2.1bioseq0.1.4
Biostrings2.68.0biotic0.1.2
bipartite2.19birtr1.0.0
BisqueRNA1.0.5bit4.0.5
bit644.0.5bitops1.0-7
biwavelet0.20.21bizdays1.0.15
bkmr0.2.2blaise1.3.11
blastula0.3.4blavaan0.5-3
BLModel1.0.2blob1.2.4
blocklength0.1.5blockmatrix1.0
blockrand1.5blocksdesign4.9
blockTools0.6.4blogdown1.19
BLR1.6BMA3.18.17
bmgarch2.0.0BMisc1.4.5
bmixture1.7BMS0.3.5
BMTAR0.1.1bnlearn4.9.1
BNPTSclust2.0BNSP2.2.3
bnstruct1.0.15boa1.1.8-2
boilerpipeR1.3.2BOIN2.7.2
bold1.3.0Bolstad0.2-41
Bolstad21.0-29bondAnalyst1.0.1
bookdown0.37Boom0.9.14
BoomSpikeSlab1.2.6bootnet1.5.6
BootPR1.0bootstrap2019.6
bootUR1.0.3BoSSA3.7
boussinesq1.0.6boxr0.3.6
bpca1.3-6bqtl1.0-36
BradleyTerry21.1-2brainR1.6.0
brandwatchR0.3.0breakfast2.3
brew1.0-10brglm0.7.2
brglm20.9.2bridgesampling1.1-2
BRINDA0.1.5brio1.1.4
brms2.20.4Brobdingnag1.2-9
broman0.80broom1.0.5
broom.helpers1.14.0brotli1.3.0
bsam1.1.3bsamGP1.2.4
BSgenome1.68.0bslib0.6.1
BsMD2023.920bspec1.6
bspmma0.1-2bssm2.0.2
BSSprep0.1bsts0.9.10
bsvars2.1.0BTLLasso0.1-12
BTM0.3.7bullishTrader1.0.1
bundesbank0.1-11BurStFin1.3
BurStMisc1.1BVAR1.0.4
bvartools0.2.4bvls1.4
C500.1.8ca0.71.1
cabinets0.6.0cabootcrs2.1.0
cachem1.0.8cacIRT1.4
CADFtest0.3-3caffsim0.2.2
Cairo1.6-2CALANGO1.0.16
calculus1.0.1calibrate1.7.7
CalibrateSSB1.3.0calibrator1.2-8
callr3.7.3cancensus0.5.6
candisc0.8-6canprot1.1.2
CANSIM2R1.14.1caper1.0.3
captr0.3.0capushe1.1.2
car3.1-2caRamel1.3
CARBayes6.1CARBayesdata3.0
CARBayesST4.0carData3.0-5
caret6.0-94carfima2.0.2
caribou1.1-1carrier0.1.1
cartogram0.3.0Cascade2.1
CascadeData1.4CAST0.9.0
castor1.8.0cate1.1.1
caTools1.18.2catR3.17
causact0.5.3CausalImpact1.3.0
CAvariants6.0CB21.3.4
cbioportalR1.1.0cbsodataR1.0.1
ccaPP0.3.3cccp0.3-1
cdlTools0.15CDM8.2-6
CDNmoney2012.4-2cds1.0.3
CellNOptR1.46.0cellranger1.1.0
censReg0.5-36censusapi0.8.0
CEoptim1.3CePa0.8.0
CeRNASeek2.1.3cfbfastR1.9.0
CFtime1.2.0ChainLadder0.2.18
chandwich1.1.6changepoint2.2.4
changepoint.geo1.0.2changepoint.np1.0.5
checkLuhn1.1.0checkmate2.3.1
checkpoint1.0.2chem.databases1.0.0
ChemoSpec6.1.9ChemoSpecUtils1.0.4
cherryblossom0.1.0chess1.0.1
chilemapas0.3.0chk0.9.1
CHNOSZ2.0.0choiceDes0.9-3
CholWishart1.1.2choroplethr3.7.2
choroplethrMaps1.0.1chromoMap4.1.1
chromote0.1.2chron2.3-61
cifti0.4.5cinterpolate1.0.1
circlize0.4.15CircSpaceTime0.9.0
CircStats0.2-6circular0.5-0
ciTools0.6.1Ckmeans.1d.dp4.3.5
Claddis0.6.3clarabel0.5.1
clarifai0.4.2classInt0.4-10
cli3.6.2clifro3.2-5
climatol4.0.0clime0.5.0
clinDR2.4.1clinfun1.1.5
clinicalsignificance2.0.0clinPK0.11.1
clinsig1.2clipr0.8.0
clisymbols1.2.0clmplus0.1.0
clock0.7.0clubSandwich0.5.10
clue0.3-65clustDRM0.1-0
clusterGeneration1.3.8clusterPower0.7.0
clusterSEs2.6.5clustMixType0.3-14
ClustVarLV2.1.1clv0.3-2.4
cmaes1.0-12cmaesr1.0.3
CMLS1.0-1cmm1.0
cmocean0.3-1cmprsk2.2-11
cmrutils1.3.1cNORM3.0.4
CNORode1.42.0coalescentMCMC0.4-4
coalitions0.6.24coarseDataTools0.6-6
cobalt4.5.3cobs1.3-5
coconots1.1.3COCONUT1.0.2
cocor1.1-4cocorresp0.4-3
cocron1.0-1coda0.19-4.1
cOde1.1.1coin1.4-3
cointReg0.2.0colf0.1.3
collapse2.0.9collapsibleTree0.1.8
collections0.3.7colorr1.0.0
colorRamps2.3.1colorspace2.1-0
colourpicker1.3.0colourvalues0.3.9
combinat0.0-8combinedevents0.1.1
CombinS1.1-1ComICS1.0.4
CommonJavaJars1.0-6commonmark1.9.1
compare0.2-6compas0.1.1
CompQuadForm1.4.3comprehenr0.6.10
conditionz0.1.0coneproj1.17
conf.design2.0.0config0.3.2
confintr1.0.2conflicted1.2.0
conquer1.3.3conquestr1.1.1
contactdata1.0.0contfrac1.1-12
convevol2.0.1convey1.0.0
coop0.6-3cops1.3-1
copula1.1-3copulaData0.0-1
copulaedas1.4.3cordillera1.0-0
corHMM2.8coro1.0.3
corona0.3.0coronavirus0.4.1
corpcor1.6.10corpora0.6
corporaexplorer0.8.6corrgram1.14
corrplot0.92cosa2.1.0
CoSMoS2.1.0costat2.4.1
countrycode1.5.0CovCombR1.0
COVID193.0.3covid19.analytics2.1.3.3
covid19br0.1.8covid19dbcand0.1.1
covid19france0.1.0covid19italy0.3.1
covid19sf0.1.2covid19swiss0.1.0
covid19us0.1.9CovidMutations0.1.3
cowplot1.1.3cp4p0.3.6
CPBayes1.1.0cpk1.3-1
cplm0.7-12cpp110.4.7
CRABS1.2.0crawl2.3.0
crayon1.5.2crch1.1-2
credentials2.0.1credule0.1.4
crfsuite0.4.2cricketdata0.2.3
cricketr0.0.26CRM1.2.4
crmPack1.0.4crossdes1.1-2
Crossover0.1-21crosstalk1.2.1
crs0.15-37crseEventStudy1.2.2
crsmeta0.3.0crul1.4.0
crunch1.30.4crunchy0.3.3
cSEM0.5.0CSGo0.6.7
cshapes2.0csodata1.4.2
cstab0.2-2csv0.6.2
ctbi2.0.5ctmcmove1.2.9
ctmm1.2.0ctrdata1.17.0
ctsem3.9.1ctsemOMX1.0.6
CTT2.3.3CTTShiny0.1
ctv0.9-5cubature2.1.0
cubble0.3.0cubelyr1.0.2
cubfits0.1-4Cubist0.4.2.1
cumSeg1.3curl5.2.0
cvar0.5cvAUC1.1.4
CVST0.2-3CVXR1.0-11
d3Network0.5.2.1DAAG1.25.4
dae3.2.21daewr1.2-11
dagitty0.3-4DAKS2.1-3
DALEX2.4.3DAMOCLES2.3
data.table1.15.0data.tree1.1.0
DatabaseConnector6.3.2DataExplorer0.8.3
dataone2.2.2datapack1.4.1
datapasta3.1.0dataRetrieval2.7.14
datarobot2.18.5dataseries0.2.0
dataverse0.3.13datawizard0.9.1
date1.2-42dateback1.0.3
datetimeutils0.6-3dbarts0.9-25
dbhydroR0.2-8DBI1.2.1
DBItest1.8.0dbmss2.9-0
dbparser2.0.1dbplyr2.4.0
dbscan1.1-12dbx0.3.1
DChaos0.1-7dclone2.3-2
DCluster0.2-9DClusterm1.0-1
dcov0.1.1dCovTS1.4
dcurver0.9.2ddalpha1.3.15
DDD5.2.2dde1.0.5
DDPM0.1.0deBInfer0.4.4
debugme1.1.0decompr6.4.0
deducorrect1.3.7deductive1.0.0
DeductiveR1.0.0deeptime1.0.1
Delaporte8.3.0DelayedArray0.26.7
DelayedMatrixStats1.22.6deldir2.0-2
deltaPlotR1.6demography2.0
dendextend1.17.1dendsort0.3.4
densEstBayes1.0-2.2DEoptim2.2-8
DEoptimR1.1-3depmix0.9.16
depmixS41.5-0DepthProc2.1.5
depthTools0.7Deriv4.1.3
derivmkts0.2.5desc1.4.3
DescTools0.99.53DESeq21.40.2
designmatch0.5.4desiR1.2.2
desirability2.1deSolve1.40
desplot1.10devtools2.4.5
dexter1.4.0dextergui0.2.6
dexterMST0.9.6dfcomb3.1-1
dfcrm0.2-2.1dfidx0.0-5
DFIT1.1dfms0.2.1
dfmta1.7-3dfoptim2023.1.0
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staggered1.1stampr0.3.1
StanHeaders2.32.5StanMoMo1.2.0
stargazer5.2.3starma1.3
stars0.6-4starter0.1.14
STARTS1.3-8startupmsg0.9.6
statcanR0.2.6statcodelists0.9.2
statebins1.4.0statespacer0.5.0
stationaRy0.5.1statip0.2.3
StatMatch1.4.1statmod1.5.0
statnet.common4.9.0StatRank0.0.6
steadyICA1.0SteinIV0.1-1
STFTS0.1.0stinepack1.4
stlplus0.5.1stm1.3.7
STMedianPolish0.2StMoMo0.4.1
stochprofML2.0.3stochQN0.1.2-1
stochvol3.2.3stockAnalyst1.0.1
stopwords2.3storr1.2.5
stplanr1.1.2stR0.6
strand0.2.0strap1.6-0
stratification2.2-7streamDepletr0.2.0
streamR0.4.5stringdist0.9.12
stringfish0.16.0stringi1.8.3
stringmagic1.0.0stringr1.5.1
strucchange1.5-3strucchangeRcpp1.5-3-1.0.4
StructuralDecompose0.1.1styler1.10.2
subplex1.8subscore3.3
sufficientForecasting0.1.0sugrrants0.2.8
SummarizedExperiment1.30.2summclust0.7.2
suntools1.0.0supclust1.1-1
SuperLearner2.0-28.1superml0.5.6
superpc1.12SuppDists1.1-9.7
support.CEs0.7-0surface0.5
SurrogateRegression0.6.0.1suRtex0.9
survcomp1.50.0surveillance1.22.1
survey4.2-1surveybootstrap0.0.3
surveydata0.2.7surveyoutliers0.1
surveyplanning4.0surveysd1.3.1
survival6660.5survivalROC1.0.3.1
survminer0.4.9survMisc0.5.6
survPresmooth1.1-11sva3.48.0
svars1.3.11svd0.5.5
svDialogs1.1.0SVDNF0.1.8
svglite2.1.3svGUI1.0.1
svrep0.6.3svs3.0.0
svUnit1.0.6swagger3.33.1
swephR0.3.1SwimmeR0.14.2
swirl2.4.5swirlify0.5.3
switchr0.14.8sylly0.1-6
sym.arma1.0symengine0.2.4
symmoments1.2.1SYNCSA1.3.4
Synth1.1-8synthACS1.7.1
synthesis1.2.4SynthETIC1.1.0
synthpop1.8-0sys3.4.2
sysfonts0.8.8systemfit1.1-30
systemfonts1.0.5table11.4.3
tables0.9.17tabnet0.5.0
tabuSearch1.1.1TAF4.2.0
tagcloud0.6TailRank3.2.2
TAM4.1-4TAQMNGR2018.5-1
targets1.4.1tau0.0-25
taxize0.9.100TBRDist1.0.2
tbrf0.1.5TCA1.2.1
TcGSA0.12.10tcltk21.2-11
Tcomp1.0.1tdigest0.4.1
TeachingDemos2.12teamcolors0.0.4
telegram.bot3.0.0telemac0.1.1
tempdisagg1.1.1tensor1.5
tensorA0.36.2.1tensorflow2.15.0
TensorPreAve1.1.0tensorTS1.0.1
TEQR6.0-0tergm4.2.0
Ternary2.3.0terra1.7-71
TESS2.1.2tesseract5.2.1
testcorr0.2.0TestDataImputation2.3
TestDesign1.5.1tester0.1.7
TestFunctions0.2.1testit0.13
TestScorer1.7.2testthat3.2.1
TexExamRandomizer1.2.7texreg1.39.3
text2vec0.6.4textcat1.0-8
textir2.0-5textplot0.2.2
textrank0.3.1textreuse0.1.5
textshaping0.3.7textTinyR1.1.8
tfarima0.3.2tfautograph0.3.2
tfdatasets2.9.0tfio0.4.1
TFisher0.2.0tfplot2021.6-1
tframe2015.12-1.1tfruns1.5.2
tgp2.4-22TH.data1.1-2
theft0.5.4.1thief0.3
ThreeArmedTrials1.0-4threeBrain1.0.1
ThreeGroups0.21threejs0.3.3
ThreeWay1.1.3thurstonianIRT0.12.4
tibble3.2.1tibbletime0.1.8
tictoc1.2Tides2.1
tidyBdE0.3.5tidycensus1.6
tidyestimate1.1.1tidygraph1.3.1
tidyhydat0.6.1tidyLPA1.1.0
tidymodels1.1.1tidyquant1.0.7
tidyqwi0.1.2tidyr1.3.1
tidyREDCap1.1.1tidyRSS2.0.7
tidyselect1.2.0tidysynth0.2.0
tidytable0.10.2tidytext0.4.1
tidytree0.4.6tidyverse2.0.0
tiff0.1-12tigris2.1
tikzDevice0.12.6timechange0.3.0
timeDate4032.109timeSeries4032.109
timeseriesdb1.0.0-1.1.2timetk2.9.0
timsac1.3.8-4tinyProject0.6.1
tinytex0.49tis1.39
tkrplot0.0-27TLMoments0.7.5.3
tm0.7-11tm.plugin.alceste1.1
tm.plugin.dc0.2-10tm.plugin.europresse1.4
tm.plugin.factiva1.8tm.plugin.lexisnexis1.4.1
tm.plugin.mail0.2-2tmap3.3-4
tmaptools3.1-1TMB1.9.10
Tmisc1.0.1tmod0.50.13
tmvnsim1.0-2tmvtnorm1.6
tnet3.0.16tokenizers0.3.0
tokenizers.bpe0.1.3toOrdinal1.3-0.0
topicdoc0.1.1topicmodels0.2-16
topicmodels.etm0.1.0topmodel0.7.5
toprdata1.0.2torch0.12.0
torchaudio0.3.1.9000torchdatasets0.3.0
torchvision0.5.1tpr0.3-3
tracerer2.2.3trackdem0.6
trackdf0.3.3trackdown1.1.1
trackeR1.6.0trackeRapp1.2
TrackReconstruction1.3tractor.base3.3.5.1
traipse0.3.0trajectories0.2-8
TrajectoryUtils1.8.0trajr1.5.1
transfR1.0.11TransPhylo1.4.5
trapezoid2.0-2traudem1.0.1
tree1.0-43treebase0.1.4
TreeBUGS1.5.0treedater0.5.0
TreeDist2.7.0treefit1.0.2
treeio1.24.0treemap2.4-4
TreeSearch1.4.0TreeSim2.4
treespace1.1.4.3TreeTools1.10.0
trend1.1.6trendeval0.1.0
trending0.1.0TrialSize1.4
triangle1.0triebeard0.4.1
trimcluster0.1-5trip1.10.0
tripack1.3-9.1tripEstimation0.0-46
TripleR1.5.4TruncatedNormal2.2.2
truncdist1.0-2truncnorm1.0-9
truncreg0.2-5trust0.1-8
trustOptim0.8.7.3TSA1.3.1
TSANN0.1.0tsbox0.4.1
tsBSS1.0.0TSCAN1.38.0
TSclust1.3.1tscount1.4.3
tsdb1.1-0tsdecomp0.2
TSdeeplearning0.1.0tsdisagg20.1.0
TSdisaggregation2.0.0TSdist3.7.1
tsDyn11.0.4.1TSEntropies0.9
tseries0.10-55tseriesChaos0.1-13.1
tseriesEntropy0.7-2tseriesTARMA0.3-4
tsfeatures1.1.1tsfknn0.6.0
tsibble1.1.4tsibbledata0.4.1
tsibbletalk0.1.0tsintermittent1.10
tsiR0.4.3TSLSTM0.1.0
tsModel0.6-1tsne0.1-3.1
tsoutliers0.6-8TSP1.2-4
tsPI1.0.4TSrepr1.1.0
tsrobprep0.3.2tssim0.1.7
TSstudio0.1.7TSTutorial1.2.7
tsutils0.9.4tswge2.1.0
tth4.12-0-1TTR0.24.4
tufterhandout1.2.1tune1.1.2
turner0.1.7TUWmodel1.1-1
tvm0.5.2tweedie2.3.5
tweenr2.0.2twosamples2.0.1
TxDb.Hsapiens.UCSC.hg19.knownGene3.2.2TxDb.Hsapiens.UCSC.hg38.knownGene3.17.0
txtq0.2.4tzdb0.4.0
uaparserjs0.3.5ubiquity2.0.1
ucminf1.2.1UComp4.0.2
udpipe0.8.11ufRisk1.0.7
ugatsdb0.2.3uGMAR3.4.5
umap0.2.10.0uncmbb0.2.2
unglue0.1.0UnifiedDoseFinding0.1.10
units0.8-5univOutl0.4
unrepx1.0-2unrtf1.4.5
UpSetR1.4.0uptasticsearch0.4.0
urca1.3-3urlchecker1.0.1
urlshorteneR1.5.7urltools1.7.3
uroot2.1-3USA.state.boundaries1.0.1
usdata0.2.0usethis2.2.2
usmap0.7.0usmapdata0.2.0
utf81.2.4utility1.4.6
uuid1.2-0uwot0.1.16
V84.4.1VALERIE1.1.0
validate1.1.3validatetools0.5.2
valr0.7.0VAM1.1.0
vapour0.9.5VAR.etp1.1
varbvs2.6-10VARDetect0.1.6
vardiag0.2-1vardpoor0.20.1
VaRES1.0.2vars1.6-0
VARshrink0.3.1varycoef0.3.4
VCA1.5.0vcd1.4-12
vcdExtra0.8-5vcr1.2.2
vctrs0.6.5vdg1.2.2
VedicDateTime0.1.9vegan2.6-4
vegperiod0.4.0VennDiagram1.7.3
venneuler1.1-4VGAM1.1-9
VGAMdata1.1-9vglmer1.0.3
vhica0.2.8VIC50.2.6
VIM6.2.2VineCopula2.5.0
vines1.1.5vip0.4.1
viridis0.6.5viridisLite0.4.2
visNetwork2.1.2visualize4.5.0
vkR0.2volatilityTrader1.0.1
volcano3D2.0.9volleystat0.2.0
vpc1.2.2vroom1.6.5
vrtest1.2W3CMarkupValidator0.1-7
waiter0.2.5waldo0.5.2
warp0.2.1washdata0.1.3
WASP1.4.3waterData1.0.8
waterquality1.0.0Watersheds1.1
WaveletComp1.1wavelets0.3-0.2
WaveSampling0.1.3waveslim1.8.4
wavethresh4.7.2wavScalogram1.1.2
wbstats1.0.4wCorr1.9.8
WDI2.7.8wdman0.2.6
WebAnalytics0.9.12webchem1.3.0
webdriver1.0.6WebGestaltR0.4.6
webmockr0.9.0webreadr0.4.0
webshot0.5.5webshot20.1.1
websocket1.4.1webutils1.2.0
wehoop2.0.0WeightIt0.14.2
weights1.0.4welo0.1.3
WeMix4.0.3WGCNA1.72-5
WH1.1.0whisker0.4.1
whitebox2.3.4whitening1.4.0
whoami1.3.0widgetframe0.3.1
WikidataQueryServiceR1.0.0WikidataR2.3.3
wikipediatrend2.1.6WikipediR1.5.0
wikitaxa0.4.0wildlifeDI0.5.1
windex2.0.7wINEQ1.2.0
withr3.0.0wk0.9.1
wktmo1.0.5wkutils0.1.3
wnl0.7.3wooldridge1.4-3
worcs0.1.14word2vec0.4.0
wordcloud2.6wordnet0.1-16
workflowr1.7.1workflows1.1.3
workflowsets1.0.1worldfootballR0.6.2
worldmet0.9.8worrms0.4.3
wpp20171.2-3wpp20191.1-1
wql1.0.0WrightMap1.3
writexl1.4.2WriteXLS6.5.0
wrMisc1.14.0wrProteo1.10.1
WRSS3.1wrswoR1.1.1
WRTDStidal1.1.4WufooR1.0.1
x121.10.3x13binary1.1.60
xaringan0.28XBRL0.99.19.1
xfun0.41xgboost1.7.7.1
xgxr1.1.2XLConnect1.0.8
xlsx0.6.5xlsxjars0.6.1
XML3.99-0.16.1xml21.3.6
XML2R0.0.6xmlrpc21.1
xopen1.0.0xplain0.2.2
xpose0.4.18xpose.nlmixr20.4.0
xpose44.7.2xslt1.4.4
xtable1.8-4xts0.13.2
XVector0.40.0xxIRT2.1.2
yaImpute1.0-34yaml2.3.8
yardstick1.3.0yesno0.1.2
yhatr0.15.1yorkr0.0.41
ypssc1.1.0yuima1.15.22
yulab.utils0.1.4zeallot0.1.0
zen4R0.9zic0.9.1
ZIM1.1.0ZINARp0.1.0
zip2.3.1zipfR0.6-70
zlibbioc1.46.0zoo1.8-12
ZRA0.2ztable0.2.3
zTree1.0.7zyp0.11-1

RStudio Server

R: 4.3.2

rstudio-server: 2023.12.0+369

CUDA Version: 11.7

GPU Driver Version: 515.43.04

Release Notes

Upgraded rstudio-server to version 2023.12.0+369, and all R packages to their latest versions. Additionally, included essential R packages for Econometrics.

R: 4.3.2; rstudio-server: 2023.12.0+369; CUDA Version: 11.7; GPU Driver Version: 515.43.04

This AMI provides thousands of R packages covering various domains such as data science, machine learning, economitrics, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, reproducible research, phylogenetics, web technologies, hydrology, sports analytics and natural language processing.

R packages (3638)

packageversionpackageversion
abc2.2.1abc.data1.0
abcrf1.9abglasso0.1.1
abind1.4-5abtest1.0.1
accrualPlot1.0.7acebayes1.10
acepack1.4.2acp2.1
acs2.1.4ACSWR1.0
actuar3.3-4ada2.0-5
adagio0.9.2adaptivetau2.3
adaptMCMC1.4adaptr1.3.2
adaptsmoFMRI1.2adaptTest1.2
additivityTests1.1-4.1ade41.7-22
ade4TkGUI0.3-1adegenet2.1.10
adegraphics1.0-21adehabitatHR0.4.21
adehabitatHS0.3.17adehabitatLT0.3.27
adehabitatMA0.3.16adephylo1.1-16
ADGofTest0.3adimpro0.9.6
adiv2.2admisc0.34
AdMit2.1.9ads1.5-10
AdvancedBasketballStats1.0.1AER1.2-10
affy1.78.0affyio1.70.0
africamonitor0.2.3agricolae1.3-7
agricolaeplotr0.3.1agridat1.22
agriwater1.0.2airGR1.7.6
airGRdatassim0.1.3airGRiwrm0.6.2
airGRteaching0.3.2airports0.1.0
ajv1.0.0akima0.6-3.4
alabama2023.1.0AlgDesign1.2.1
almanac1.0.0alpaca0.3.4
alphavantager0.1.3ALTopt0.1.2
Amelia1.8.1AmericanCallOpt0.95
ammiBayes1.0-1AMR2.1.1
AnaCoDa0.1.4.4anacor1.1-4
analogsea1.0.7.2anesrake0.80
animation2.7anipaths0.10.2
AnnotationDbi1.62.1Anthropometry1.19
anytime0.3.9aod1.3.3
aoos0.5.0AovBay0.1.0
ape5.7-1APFr1.0.2
aphid1.3.5aphylo0.3-3
aplot0.2.2apollo0.3.1
approximator1.2-8apt3.0
ARCensReg3.0.1ArchaeoChron0.1
ArchaeoPhases1.8archetypes2.2-0.1
archivist2.3.6ArDec2.1-1
ARDL0.2.4ardl.nardl1.2.3
areal0.1.8arfima1.8-1
argparse2.2.2arm1.13-1
aroma.apd0.7.0arpr0.1.2
arrangements1.1.9arrow14.0.0.2
ars0.6aRxiv0.6
ascii2.4asd2.2
ash1.0-15ashr2.2-63
AsioHeaders1.22.1-2askpass1.2.0
aspect1.0-6ASSA2.0
assertthat0.2.1AssetCorr1.0.4
astsa2.1asymmetry2.0.4
ata1.1.1atom4R0.3-3
aTSA3.1.2attempt0.3.1
attention0.4.0AUC0.3.2
audio0.1-11autoFRK1.4.3
autoimage2.2.3automap1.1-9
autostsm3.1.2av0.9.0
aweek1.0.3aws2.5-3
aws.signature0.6.0awsMethods1.1-1
AzureAuth1.3.3AzureCognitive1.0.1
AzureContainers1.3.2AzureCosmosR1.0.0
AzureGraph1.3.4AzureKusto1.1.3
AzureQstor1.0.1AzureRMR2.4.4
AzureStor3.7.0AzureTableStor1.0.0
AzureVision1.0.2AzureVM2.2.2
BACCO2.1-0BACCT1.0
backports1.4.1backtest0.3-4
bacondecomp0.1.1baggr0.7.6
bain0.2.10BalancedSampling1.6.3
BaM1.0.3bama1.3.0
bamdit3.4.0bamlss1.2-2
BAMMtools2.1.11bang1.0.3
BANOVA1.2.1BART2.9.6
bartBMA1.0bartCause1.0-6
bartMachine1.3.4.1bartMachineJARs1.2.1
BAS1.7.1basad0.3.0
base642.0.1base64enc0.1-3
base64url1.4baseballDBR0.1.2
basicMCMCplots0.2.7BaSkePro1.1.1
BasketballAnalyzeR0.5.0BASS1.3.1
BatchExperiments1.4.3BatchJobs1.9
batchmeans1.0-4BAwiR1.3.2
baycn1.2.0bayefdr0.2.1
bayes4psy1.2.12bayesAB1.1.3
bayesammi0.1.0bayesanova1.5
BayesARIMAX0.1.1BayesBinMix1.4.1
bayesbio1.0.0bayesboot0.2.2
BayesBP1.1bayesbr0.0.1.0
BayesCACE1.2.3BayesCombo1.0
BayesComm0.1-2bayescopulareg0.1.3
bayescount0.9.99-9BayesCR2.1
bayesCT0.99.3BayesCTDesign0.6.1
BayesDA2012.04-1bayesDccGarch3.0.4
bayesdfa1.3.1bayesdistreg0.1.0
bayesDP1.3.6BayesFactor0.9.12-4.6
BayesFM0.1.5bayesforecast1.0.1
bayesGAM0.0.2bayesGARCH2.1.10
BayesGOF5.2BayesGPfit1.1.0
BayesGWQS0.1.1bayesian0.0.9
bayesianETAS1.0.3Bayesiangammareg0.1.0
BayesianGLasso0.2.0BayesianLaterality0.1.2
BayesianNetwork0.3BayesianTools0.1.8
bayesImageS0.6-1BayesLCA1.9
bayesLife5.2-0bayeslincom1.3.0
BayesLN0.2.10BayesLogit2.1
bayesloglin1.0.1bayeslongitudinal0.1.0
bayesm3.1-6BayesMallows1.5.0
BayesMassBal1.1.0bayesmeta3.3
bayesmix0.7-6bayesnec2.1.1.0
bayesplot1.10.0bayesQR2.4
BayesSAE1.0-2bayestestR0.13.1
bayesTFR7.4-2BayesTools0.2.16
BayesTree0.3-1.4BayesVarSel2.2.5
BayesX0.3-3BAYSTAR0.2-10
baytrends2.0.9BB2019.10-1
BBmisc1.13bbmle1.0.25.1
bbotk0.7.3BCBCSF1.0-1
BCC19970.1.1BCE2.2.0
Bchron4.7.6bcp4.0.3
bcpa1.3.2bcrm0.5.4
BDgraph2.72bdrc1.1.0
bdsmatrix1.3-6BE0.2.4
beadarray2.50.0BeadDataPackR1.52.0
beakr0.4.3bearishTrader1.0.2
beepr1.3beeswarm0.4.0
benchmarkme1.0.8benchmarkmeData1.0.4
BenfordTests1.2.0bentcableAR0.3.1
Bergm5.0.7berryFunctions1.22.0
Bessel0.6-0BEST0.5.4
BetaBit2.2betafunctions1.8.1
betapart1.6betareg3.1-4
betategarch3.3BETS0.4.9
bets.covid191.0.0beyondWhittle1.2.0
bezier1.1.2bfast1.6.1
BFpack1.2.3BGGM2.0.4
BGLR1.1.1BGVAR2.5.5
bgw0.1.2BH1.84.0-0
BHH22016.05.31BiasedUrn2.0.11
bibtex0.5.1biclust2.0.3.1
bidask2.0.2bife0.7.2
BIFIEsurvey3.4-15biganalytics1.1.21
bigchess1.9.1bigD0.2.0
bigleaf0.8.2biglm0.9-2.1
bigmemory4.6.4bigmemory.sri0.1.8
bigrquery1.4.2bigsplines1.1-1
bigtime0.2.3BigVAR1.1.2
bimets3.0.2bindr0.1.1
bindrcpp0.2.3binman0.1.3
binom1.1-1.1binomSamSize0.1-5
binr1.1.1binseqtest1.0.4
Biobase2.60.0BiocGenerics0.46.0
BiocManager1.30.22BiocParallel1.34.1
BiocVersion3.17.1bioinactivation1.2.3
biomformat1.28.0bioOED0.2.1
Biostrings2.68.0biotic0.1.2
bipartite2.19birtr1.0.0
bit4.0.5bit644.0.5
bitops1.0-7biwavelet0.20.21
bizdays1.0.13bkmr0.2.2
blaise1.3.11blastula0.3.4
blavaan0.5-2BLModel1.0.2
blob1.2.4blocklength0.1.5
blockmatrix1.0blockrand1.5
blocksdesign4.9blockTools0.6.4
blogdown1.18BLR1.6
BMA3.18.17bmgarch2.0.0
BMisc1.4.5bmixture1.7
BMS0.3.5BMTAR0.1.1
bnlearn4.9.1BNPTSclust2.0
BNSP2.2.3boa1.1.8-2
boilerpipeR1.3.2BOIN2.7.2
bold1.3.0Bolstad0.2-41
Bolstad21.0-29bondAnalyst1.0.1
bookdown0.37Boom0.9.14
BoomSpikeSlab1.2.6bootnet1.5.6
BootPR1.0bootstrap2019.6
bootUR1.0.2BoSSA3.7
boussinesq1.0.6boxr0.3.6
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SuppDists1.1-9.7support.CEs0.7-0
surface0.5suRtex0.9
survcomp1.50.0surveillance1.22.1
survey4.2-1surveybootstrap0.0.3
surveydata0.2.7surveyoutliers0.1
surveyplanning4.0surveysd1.3.1
survivalROC1.0.3.1survPresmooth1.1-11
svars1.3.11svd0.5.5
SVDNF0.1.8svglite2.1.3
svrep0.6.3svs3.0.0
svUnit1.0.6swagger3.33.1
swephR0.3.1SwimmeR0.14.2
swirl2.4.5swirlify0.5.3
switchr0.14.8sylly0.1-6
sym.arma1.0symengine0.2.4
symmoments1.2.1SYNCSA1.3.4
Synth1.1-8synthACS1.7.1
synthesis1.2.4synthpop1.8-0
sys3.4.2sysfonts0.8.8
systemfit1.1-30systemfonts1.0.5
table11.4.3tables0.9.17
tabnet0.5.0TAF4.2.0
TAM4.1-4TAQMNGR2018.5-1
targets1.4.1tau0.0-25
taxize0.9.100TBRDist1.0.2
tbrf0.1.5tcltk21.2-11
Tcomp1.0.1tdigest0.4.1
TeachingDemos2.12teamcolors0.0.4
telegram.bot3.0.0telemac0.1.1
tempdisagg1.1.1tensor1.5
tensorA0.36.2.1tensorflow2.14.0
TensorPreAve1.1.0tensorTS1.0.1
TEQR6.0-0tergm4.2.0
Ternary2.3.0terra1.7-65
TESS2.1.2tesseract5.2.1
testcorr0.2.0TestDataImputation2.3
TestDesign1.5.1tester0.1.7
testit0.13TestScorer1.7.2
testthat3.2.1TexExamRandomizer1.2.3
texreg1.39.3text2vec0.6.4
textcat1.0-8textir2.0-5
textplot0.2.2textrank0.3.1
textreuse0.1.5textshaping0.3.7
textTinyR1.1.8tfarima0.3.2
tfautograph0.3.2tfdatasets2.9.0
tfio0.4.1tfplot2021.6-1
tframe2015.12-1.1tfruns1.5.1
tgp2.4-22TH.data1.1-2
theft0.5.4.1thief0.3
ThreeArmedTrials1.0-4threeBrain1.0.1
ThreeGroups0.21threejs0.3.3
ThreeWay1.1.3thurstonianIRT0.12.4
tibble3.2.1tibbletime0.1.8
tictoc1.2Tides2.1
tidyBdE0.3.4tidycensus1.5
tidygraph1.3.0tidyhydat0.6.1
tidyLPA1.1.0tidymodels1.1.1
tidyquant1.0.7tidyqwi0.1.2
tidyr1.3.0tidyREDCap1.1.1
tidyRSS2.0.7tidyselect1.2.0
tidysynth0.2.0tidytable0.10.2
tidytext0.4.1tidytree0.4.6
tidyverse2.0.0tiff0.1-12
tigris2.0.4tikzDevice0.12.6
timechange0.2.0timeDate4032.109
timeSeries4032.108timeseriesdb1.0.0-1.1.2
timetk2.9.0timsac1.3.8-4
tinyProject0.6.1tinytex0.49
tis1.39tkrplot0.0-27
TLMoments0.7.5.3tm0.7-11
tm.plugin.alceste1.1tm.plugin.dc0.2-10
tm.plugin.europresse1.4tm.plugin.factiva1.8
tm.plugin.lexisnexis1.4.1tm.plugin.mail0.2-2
tmap3.3-4tmaptools3.1-1
TMB1.9.10tmvnsim1.0-2
tmvtnorm1.6tokenizers0.3.0
tokenizers.bpe0.1.3toOrdinal1.3-0.0
topicdoc0.1.1topicmodels0.2-16
topicmodels.etm0.1.0topmodel0.7.5
torch0.12.0torchaudio0.3.1.9000
torchdatasets0.3.0torchvision0.5.1
tpr0.3-3tracerer2.2.3
trackdem0.6trackdf0.3.2
trackdown1.1.1trackeR1.5.2
trackeRapp1.2TrackReconstruction1.3
tractor.base3.3.5.1traipse0.3.0
trajectories0.2-8trajr1.5.1
transfR1.0.11TransPhylo1.4.5
trapezoid2.0-2traudem1.0.1
tree1.0-43treebase0.1.4
TreeBUGS1.5.0treedater0.5.0
TreeDist2.7.0treeio1.24.0
treemap2.4-4TreeSearch1.4.0
TreeSim2.4treespace1.1.4.3
TreeTools1.10.0trend1.1.6
trendeval0.1.0trending0.1.0
TrialSize1.4triangle1.0
triebeard0.4.1trimcluster0.1-5
trip1.10.0tripack1.3-9.1
tripEstimation0.0-46TripleR1.5.4
TruncatedNormal2.2.2truncdist1.0-2
truncnorm1.0-9truncreg0.2-5
trust0.1-8TSA1.3.1
TSANN0.1.0tsbox0.4.1
tsBSS1.0.0TSclust1.3.1
tscount1.4.3tsdb1.1-0
tsdecomp0.2TSdeeplearning0.1.0
tsdisagg20.1.0TSdisaggregation2.0.0
TSdist3.7.1tsDyn11.0.4
TSEntropies0.9tseries0.10-55
tseriesChaos0.1-13.1tseriesEntropy0.7-2
tseriesTARMA0.3-4tsfeatures1.1.1
tsfknn0.6.0tsibble1.1.3
tsibbledata0.4.1tsibbletalk0.1.0
tsintermittent1.10tsiR0.4.3
TSLSTM0.1.0tsModel0.6-1
tsoutliers0.6-8TSP1.2-4
tsPI1.0.4TSrepr1.1.0
tsrobprep0.3.2tssim0.1.7
TSstudio0.1.7TSTutorial1.2.7
tsutils0.9.4tswge2.1.0
tth4.12-0-1TTR0.24.4
tufterhandout1.2.1tune1.1.2
turner0.1.7TUWmodel1.1-1
tvm0.5.2tweedie2.3.5
tweenr2.0.2twosamples2.0.1
txtq0.2.4tzdb0.4.0
uaparserjs0.3.5ubiquity2.0.1
ucminf1.2.1UComp4.0.2
udpipe0.8.11ufRisk1.0.7
ugatsdb0.2.3uGMAR3.4.5
uncmbb0.2.2unglue0.1.0
UnifiedDoseFinding0.1.10units0.8-5
univOutl0.4unrepx1.0-2
unrtf1.4.3uptasticsearch0.4.0
urca1.3-3urlchecker1.0.1
urlshorteneR1.5.7urltools1.7.3
uroot2.1-3USA.state.boundaries1.0.1
usdata0.2.0usethis2.2.2
usmap0.6.4usmapdata0.1.2
utf81.2.4utility1.4.6
uuid1.1-1uwot0.1.16
V84.4.1validate1.1.3
validatetools0.5.2vapour0.9.5
VAR.etp1.1VARDetect0.1.6
vardiag0.2-1vardpoor0.20.1
VaRES1.0.2vars1.6-0
VARshrink0.3.1varycoef0.3.4
VCA1.4.5vcd1.4-12
vcdExtra0.8-5vcr1.2.2
vctrs0.6.5vdg1.2.2
VedicDateTime0.1.9vegan2.6-4
vegperiod0.4.0VennDiagram1.7.3
venneuler1.1-3VGAM1.1-9
VGAMdata1.1-9vglmer1.0.3
VIC50.2.6VIM6.2.2
VineCopula2.5.0vip0.4.1
viridis0.6.4viridisLite0.4.2
visNetwork2.1.2visualize4.5.0
vkR0.2volatilityTrader1.0.1
volleystat0.2.0vpc1.2.2
vroom1.6.5vrtest1.2
W3CMarkupValidator0.1-7waiter0.2.5
waldo0.5.2warp0.2.1
washdata0.1.3WASP1.4.3
waterData1.0.8waterquality1.0.0
Watersheds1.1WaveletComp1.1
wavelets0.3-0.2WaveSampling0.1.3
waveslim1.8.4wavethresh4.7.2
wavScalogram1.1.2wbstats1.0.4
wCorr1.9.8WDI2.7.8
wdman0.2.6WebAnalytics0.9.12
webdriver1.0.6webmockr0.9.0
webreadr0.4.0webshot0.5.5
webshot20.1.1websocket1.4.1
webutils1.2.0wehoop2.0.0
WeightIt0.14.2weights1.0.4
welo0.1.3WeMix4.0.3
whisker0.4.1whitebox2.3.4
whoami1.3.0widgetframe0.3.1
WikidataQueryServiceR1.0.0WikidataR2.3.3
wikipediatrend2.1.6WikipediR1.5.0
wikitaxa0.4.0wildlifeDI0.5.1
windex2.0.7wINEQ1.2.0
withr2.5.2wk0.9.1
wktmo1.0.5wkutils0.1.3
wnl0.7.3wooldridge1.4-3
worcs0.1.14word2vec0.4.0
wordcloud2.6wordnet0.1-16
workflowr1.7.1workflows1.1.3
workflowsets1.0.1worldfootballR0.6.2
worldmet0.9.8worrms0.4.3
wpp20171.2-3wpp20191.1-1
wql1.0.0WrightMap1.3
writexl1.4.2WriteXLS6.5.0
WRSS3.1wrswoR1.1.1
WRTDStidal1.1.4WufooR1.0.1
x121.10.3x13binary1.1.57-4
xaringan0.28XBRL0.99.19.1
xfun0.41xgboost1.7.6.1
xgxr1.1.2XLConnect1.0.7
xlsx0.6.5xlsxjars0.6.1
XML3.99-0.16xml21.3.6
XML2R0.0.6xopen1.0.0
xplain0.2.2xpose0.4.17
xpose.nlmixr20.4.0xpose44.7.2
xslt1.4.4xtable1.8-4
xts0.13.1XVector0.40.0
xxIRT2.1.2yaImpute1.0-34
yaml2.3.8yardstick1.2.0
yesno0.1.2yhatr0.15.1
yorkr0.0.41yuima1.15.22
yulab.utils0.1.3zeallot0.1.0
zen4R0.9zic0.9.1
ZIM1.1.0ZINARp0.1.0
zip2.3.0zipfR0.6-70
zlibbioc1.46.0zoo1.8-12
ZRA0.2ztable0.2.3
zTree1.0.7zyp0.11-1

RStudio Server

R: 4.3.2

rstudio-server: 2023.09.01-494

CUDA Version: 11.7

GPU Driver Version: 515.43.04

Release Notes

Upgraded R to version 4.3.2, rstudio-server to version 2023.09.01-494, and all R packages to their latest versions. Additionally, included essential R packages for Reproducible Research, Phylogenetics, Web Technologies, Hydrology, and Sports Analytics.

R: 4.3.2; rstudio-server: 2023.09.1-494; CUDA Version: 11.7; GPU Driver Version: 515.43.04

This AMI provides thousands of R packages covering various domains such as data science, machine learning, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, reproducible research, phylogenetics, web technologies, hydrology, sports analytics and natural language processing.

R packages (3518)

packageversionpackageversion
abc2.2.1abc.data1.0
abcrf1.9abglasso0.1.1
abind1.4-5abtest1.0.1
accrualPlot1.0.7acebayes1.10
acepack1.4.2acp2.1
acs2.1.4ACSWR1.0
actuar3.3-3ada2.0-5
adagio0.9.2adaptivetau2.2-3
adaptMCMC1.4adaptr1.3.2
adaptsmoFMRI1.2adaptTest1.2
additivityTests1.1-4.1ade41.7-22
ade4TkGUI0.3-1adegenet2.1.10
adegraphics1.0-21adehabitatHR0.4.21
adehabitatHS0.3.17adehabitatLT0.3.27
adehabitatMA0.3.16adephylo1.1-16
ADGofTest0.3adimpro0.9.6
adiv2.2admisc0.33
AdMit2.1.9ads1.5-9
AdvancedBasketballStats1.0.1AER1.2-10
affy1.78.0affyio1.70.0
africamonitor0.2.3agricolae1.3-7
agricolaeplotr0.3.1agridat1.22
agriwater1.0.2airGR1.7.6
airGRdatassim0.1.3airGRiwrm0.6.2
airGRteaching0.3.2airports0.1.0
ajv1.0.0akima0.6-3.4
alabama2023.1.0AlgDesign1.2.1
almanac1.0.0alphavantager0.1.3
ALTopt0.1.2Amelia1.8.1
AmericanCallOpt0.95ammiBayes1.0-1
AMR2.1.1AnaCoDa0.1.4.4
anacor1.1-4analogsea1.0.7.2
anesrake0.80animation2.7
anipaths0.10.2AnnotationDbi1.62.1
Anthropometry1.19anytime0.3.9
aod1.3.2aoos0.5.0
AovBay0.1.0ape5.7-1
APFr1.0.2aphid1.3.5
aphylo0.3-3aplot0.2.2
approximator1.2-8ARCensReg3.0.1
ArchaeoChron0.1ArchaeoPhases1.8
archetypes2.2-0.1archivist2.3.6
ArDec2.1-1ARDL0.2.4
ardl.nardl1.2.3areal0.1.8
arfima1.8-1argparse2.2.2
arm1.13-1aroma.apd0.7.0
arpr0.1.2arrangements1.1.9
arrow13.0.0.1ars0.6
aRxiv0.6ascii2.4
asd2.2ash1.0-15
ashr2.2-63AsioHeaders1.22.1-2
askpass1.2.0aspect1.0-6
ASSA2.0assertthat0.2.1
AssetCorr1.0.4astsa2.0
asymmetry2.0.4ata1.1.1
atom4R0.3-3aTSA3.1.2
attempt0.3.1attention0.3.0
AUC0.3.2audio0.1-11
autoFRK1.4.3autoimage2.2.3
automap1.1-9autostsm3.1.2
av0.8.6aweek1.0.3
aws2.5-3aws.signature0.6.0
awsMethods1.1-1AzureAuth1.3.3
AzureCognitive1.0.1AzureContainers1.3.2
AzureCosmosR1.0.0AzureGraph1.3.4
AzureKusto1.1.3AzureQstor1.0.1
AzureRMR2.4.4AzureStor3.7.0
AzureTableStor1.0.0AzureVision1.0.2
AzureVM2.2.2BACCO2.1-0
BACCT1.0backports1.4.1
backtest0.3-4baggr0.7.6
bain0.2.10BalancedSampling1.6.3
BaM1.0.3bama1.3.0
bamdit3.4.0bamlss1.2-2
BAMMtools2.1.10bang1.0.2
BANOVA1.2.1BART2.9.4
bartBMA1.0bartCause1.0-6
bartMachine1.3.4.1bartMachineJARs1.2.1
BAS1.6.4basad0.3.0
base642.0.1base64enc0.1-3
base64url1.4baseballDBR0.1.2
basicMCMCplots0.2.7BaSkePro0.1.0
BasketballAnalyzeR0.5.0BASS1.3.1
BatchExperiments1.4.3BatchJobs1.9
batchmeans1.0-4BAwiR1.3
baycn1.2.0bayefdr0.2.1
bayes4psy1.2.12bayesAB1.1.3
bayesammi0.1.0bayesanova1.5
BayesARIMAX0.1.1BayesBinMix1.4.1
bayesbio1.0.0bayesboot0.2.2
BayesBP1.1bayesbr0.0.1.0
BayesCACE1.2.3BayesCombo1.0
BayesComm0.1-2bayescopulareg0.1.3
bayescount0.9.99-8BayesCR2.1
bayesCT0.99.3BayesCTDesign0.6.1
BayesDA2012.04-1bayesDccGarch3.0.4
bayesdfa1.3.1bayesdistreg0.1.0
bayesDP1.3.6BayesFactor0.9.12-4.5
BayesFM0.1.5bayesforecast1.0.1
bayesGAM0.0.2bayesGARCH2.1.10
BayesGOF5.2BayesGPfit1.1.0
BayesGWQS0.1.1bayesian0.0.9
bayesianETAS1.0.3Bayesiangammareg0.1.0
BayesianGLasso0.2.0BayesianLaterality0.1.2
BayesianNetwork0.3BayesianTools0.1.8
bayesImageS0.6-1BayesLCA1.9
bayesLife5.2-0bayeslincom1.3.0
BayesLN0.2.8BayesLogit2.1
bayesloglin1.0.1bayeslongitudinal0.1.0
bayesm3.1-6BayesMallows1.4.0
BayesMassBal1.1.0bayesmeta3.3
bayesmix0.7-6bayesnec2.1.1.0
bayesplot1.10.0bayesQR2.4
BayesSAE1.0-2bayestestR0.13.1
bayesTFR7.4-2BayesTools0.2.16
BayesTree0.3-1.4BayesVarSel2.2.5
BayesX0.3-3BAYSTAR0.2-10
baytrends2.0.9BB2019.10-1
BBmisc1.13bbmle1.0.25
BCBCSF1.0-1BCC19970.1.1
BCE2.2.0Bchron4.7.6
bcp4.0.3bcpa1.3.2
bcrm0.5.4BDgraph2.72
bdrc1.1.0bdsmatrix1.3-6
BE0.2.4beadarray2.50.0
BeadDataPackR1.52.0beakr0.4.3
bearishTrader1.0.2beepr1.3
beeswarm0.4.0benchmarkme1.0.8
benchmarkmeData1.0.4BenfordTests1.2.0
bentcableAR0.3.1Bergm5.0.6
berryFunctions1.22.0Bessel0.6-0
BEST0.5.4BetaBit2.2
betafunctions1.8.1betapart1.6
betareg3.1-4betategarch3.3
BETS0.4.9bets.covid191.0.0
beyondWhittle1.2.0bezier1.1.2
bfast1.6.1BFpack1.2.3
BGGM2.0.4BGLR1.1.0
BGVAR2.5.2BH1.81.0-1
BHH22016.05.31BiasedUrn2.0.11
bibtex0.5.1biclust2.0.3.1
bidask1.0.0BIFIEsurvey3.4-15
biganalytics1.1.21bigchess1.9.1
bigD0.2.0bigleaf0.8.2
biglm0.9-2.1bigmemory4.6.1
bigmemory.sri0.1.6bigrquery1.4.2
bigsplines1.1-1bigtime0.2.3
BigVAR1.1.2bindr0.1.1
bindrcpp0.2.2binman0.1.3
binom1.1-1.1binomSamSize0.1-5
binr1.1.1binseqtest1.0.4
Biobase2.60.0BiocGenerics0.46.0
BiocManager1.30.22BiocParallel1.34.1
BiocVersion3.17.1bioinactivation1.2.3
biomformat1.28.0bioOED0.2.1
Biostrings2.68.0biotic0.1.2
bipartite2.18birtr1.0.0
bit4.0.5bit644.0.5
bitops1.0-7biwavelet0.20.21
bizdays1.0.13bkmr0.2.2
blaise1.3.10blastula0.3.4
blavaan0.5-2BLModel1.0.2
blob1.2.4blocklength0.1.5
blockmatrix1.0blockrand1.5
blocksdesign4.9blockTools0.6.4
blogdown1.18BLR1.6
BMA3.18.17bmgarch2.0.0
bmixture1.7BMS0.3.5
BMTAR0.1.1bnlearn4.9
BNPTSclust2.0BNSP2.2.3
boa1.1.8-2boilerpipeR1.3.2
BOIN2.7.2bold1.3.0
Bolstad0.2-41Bolstad21.0-29
bondAnalyst1.0.1bookdown0.36
Boom0.9.11BoomSpikeSlab1.2.5
bootnet1.5.6BootPR1.0
bootstrap2019.6bootUR1.0.2
BoSSA3.7boussinesq1.0.6
boxr0.3.6bpca1.3-4
bqtl1.0-35BradleyTerry21.1-2
brainR1.6.0brandwatchR0.3.0
breakfast2.3brew1.0-8
brglm0.7.2brglm20.9.2
bridgesampling1.1-2brio1.1.3
brms2.20.4Brobdingnag1.2-9
broman0.80broom1.0.5
broom.helpers1.14.0brotli1.3.0
bsam1.1.3bsamGP1.2.4
bslib0.5.1BsMD2023.920
bspec1.6bspmma0.1-2
bssm2.0.2BSSprep0.1
bsts0.9.9bsvars2.0.0
BTLLasso0.1-11BTM0.3.7
bullishTrader1.0.1bundesbank0.1-11
BurStFin1.3BurStMisc1.1
BVAR1.0.4bvartools0.2.3
ca0.71.1cabinets0.6.0
cabootcrs2.1.0cachem1.0.8
cacIRT1.4CADFtest0.3-3
caffsim0.2.2Cairo1.6-1
CALANGO1.0.16calculus1.0.1
CalibrateSSB1.3.0calibrator1.2-8
callr3.7.3cancensus0.5.6
candisc0.8-6CANSIM2R1.14.1
caper1.0.3captr0.3.0
car3.1-2CARBayes6.0
CARBayesdata3.0CARBayesST4.0
carData3.0-5caret6.0-94
carfima2.0.2caribou1.1-1
cartogram0.3.0CAST0.8.1
castor1.7.11caTools1.18.2
catR3.17causact0.5.3
CausalImpact1.3.0CAvariants6.0
cbsodataR0.5.1cccp0.2-9
cdlTools0.15CDM8.2-6
cds1.0.3CellNOptR1.46.0
cellranger1.1.0censusapi0.8.0
cfbfastR1.9.0CFtime1.2.0
ChainLadder0.2.18chandwich1.1.6
changepoint2.2.4changepoint.geo1.0.2
changepoint.np1.0.5checkLuhn1.1.0
checkmate2.3.0checkpoint1.0.2
chem.databases1.0.0cherryblossom0.1.0
chess1.0.1chilemapas0.3.0
chk0.9.1choiceDes0.9-3
CholWishart1.1.2choroplethr3.7.2
choroplethrMaps1.0.1chron2.3-61
cifti0.4.5cinterpolate1.0.0
circlize0.4.15CircSpaceTime0.9.0
CircStats0.2-6circular0.5-0
ciTools0.6.1Claddis0.6.3
clarifai0.4.2classInt0.4-10
cli3.6.1clifro3.2-5
climatol4.0.0clime0.5.0
clinDR2.4.1clinfun1.1.5
clinicalsignificance1.2.0clinPK0.11.1
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tseriesChaos0.1-13.1tseriesEntropy0.7-2
tseriesTARMA0.3-4tsfeatures1.1.1
tsfknn0.5.2tsibble1.1.3
tsibbledata0.4.1tsibbletalk0.1.0
tsintermittent1.10tsiR0.4.3
TSLSTM0.1.0tsModel0.6-1
tsoutliers0.6-8TSP1.2-4
tsPI1.0.4TSrepr1.1.0
tsrobprep0.3.2tssim0.1.7
TSstudio0.1.7TSTutorial1.2.7
tsutils0.9.3tswge2.1.0
tth4.12-0-1TTR0.24.3
tufterhandout1.2.1tune1.1.2
turner0.1.7TUWmodel1.1-1
tvm0.5.2tweedie2.3.5
tweenr2.0.2twosamples2.0.1
txtq0.2.4tzdb0.4.0
uaparserjs0.3.5ubiquity2.0.1
ucminf1.2.0UComp4.0.2
udpipe0.8.11ufRisk1.0.7
ugatsdb0.2.3uGMAR3.4.5
uncmbb0.2.2unglue0.1.0
UnifiedDoseFinding0.1.10units0.8-4
univOutl0.4unrepx1.0-2
unrtf1.4.3uptasticsearch0.4.0
urca1.3-3urlchecker1.0.1
urlshorteneR1.5.7urltools1.7.3
uroot2.1-2USA.state.boundaries1.0.1
usdata0.2.0usethis2.2.2
usmap0.6.3usmapdata0.1.1
utf81.2.4utility1.4.6
uuid1.1-1uwot0.1.16
V84.4.0validate1.1.3
validatetools0.5.2vapour0.9.5
VAR.etp1.1VARDetect0.1.6
vardiag0.2-1vardpoor0.20.1
VaRES1.0.2vars1.5-9
VARshrink0.3.1varycoef0.3.4
VCA1.4.5vcd1.4-11
vcdExtra0.8-5vcr1.2.2
vctrs0.6.4vdg1.2.2
VedicDateTime0.1.9vegan2.6-4
vegperiod0.4.0VennDiagram1.7.3
venneuler1.1-3VGAM1.1-9
VGAMdata1.1-9vglmer1.0.3
VIC50.2.6VIM6.2.2
VineCopula2.5.0vip0.4.1
viridis0.6.4viridisLite0.4.2
visNetwork2.1.2visualize4.4.0
vkR0.2volatilityTrader1.0.1
volleystat0.2.0vpc1.2.2
vroom1.6.4vrtest1.2
W3CMarkupValidator0.1-7waiter0.2.5
waldo0.5.2warp0.2.1
washdata0.1.3WASP1.4.3
waterData1.0.8waterquality1.0.0
Watersheds1.1WaveletComp1.1
wavelets0.3-0.2WaveSampling0.1.3
waveslim1.8.4wavethresh4.7.2
wavScalogram1.1.2wCorr1.9.8
WDI2.7.8wdman0.2.6
WebAnalytics0.9.12webdriver1.0.6
webmockr0.9.0webreadr0.4.0
webshot0.5.5webutils1.1
wehoop1.5.0WeightIt0.14.2
weights1.0.4welo0.1.3
WeMix4.0.0whisker0.4.1
whitebox2.3.1whoami1.3.0
widgetframe0.3.1WikidataQueryServiceR1.0.0
WikidataR2.3.3wikipediatrend2.1.6
WikipediR1.5.0wikitaxa0.4.0
wildlifeDI0.5.0windex2.0.6
wINEQ1.2.0withr2.5.2
wk0.9.0wktmo1.0.5
wkutils0.1.3wnl0.7.3
wooldridge1.4-3worcs0.1.14
word2vec0.4.0wordcloud2.6
wordnet0.1-16workflowr1.7.1
workflows1.1.3workflowsets1.0.1
worldfootballR0.6.2worldmet0.9.8
worrms0.4.3wpp20171.2-3
wpp20191.1-1wql1.0.0
WrightMap1.3writexl1.4.2
WriteXLS6.4.0WRSS3.1
wrswoR1.1.1WRTDStidal1.1.4
WufooR1.0.1x121.10.3
x13binary1.1.57-4xaringan0.28
XBRL0.99.19.1xfun0.41
xgboost1.7.5.1xgxr1.1.2
XLConnect1.0.7xlsx0.6.5
xlsxjars0.6.1XML3.99-0.15
xml21.3.5XML2R0.0.6
xopen1.0.0xplain0.2.2
xpose0.4.17xpose.nlmixr20.4.0
xpose44.7.2xslt1.4.4
xtable1.8-4xts0.13.1
XVector0.40.0xxIRT2.1.2
yaImpute1.0-33yaml2.3.7
yardstick1.2.0yesno0.1.2
yhatr0.15.1yorkr0.0.41
yuima1.15.22yulab.utils0.1.0
zeallot0.1.0zen4R0.9
zic0.9.1ZIM1.1.0
ZINARp0.1.0zip2.3.0
zipfR0.6-70zlibbioc1.46.0
zoo1.8-12ZRA0.2
ztable0.2.3zyp0.11-1

RStudio Server

R: 4.3.1

rstudio-server: 2023.06.2+561

CUDA Version: 11.7

GPU Driver Version: 515.43.04

Release Notes

Added package flock

R: 4.3.1; rstudio-server: 2023.06.2+561; CUDA Version: 11.7; GPU Driver Version: 515.43.04

This AMI provides thousands of R packages covering various domains such as data science, machine learning, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, and natural language processing.

R packages (2904)

packageversionpackageversion
abc2.2.1abc.data1.0
abcrf1.9abglasso0.1.1
abind1.4-5abtest1.0.1
accrualPlot1.0.7acebayes1.10
acepack1.4.2acp2.1
acs2.1.4ACSWR1.0
actuar3.3-2ada2.0-5
adagio0.8.5adaptivetau2.2-3
adaptMCMC1.4adaptr1.3.2
adaptsmoFMRI1.2adaptTest1.1
ade41.7-22ade4TkGUI0.3-1
adegenet2.1.10adegraphics1.0-18
adehabitatHR0.4.21adehabitatHS0.3.17
adehabitatLT0.3.27adehabitatMA0.3.16
ADGofTest0.3adimpro0.9.6
admisc0.33AdMit2.1.9
ads1.5-9AER1.2-10
affy1.78.0affyio1.70.0
africamonitor0.2.3agricolae1.3-6
agricolaeplotr0.3.1agridat1.22
airports0.1.0akima0.6-3.4
alabama2023.1.0AlgDesign1.2.1
almanac1.0.0alphavantager0.1.3
ALTopt0.1.2Amelia1.8.1
AmericanCallOpt0.95ammiBayes1.0-1
AMR2.1.0AnaCoDa0.1.4.4
anacor1.1-4anesrake0.80
animation2.7anipaths0.10.2
AnnotationDbi1.62.1anytime0.3.9
aod1.3.2aoos0.5.0
AovBay0.1.0ape5.7-1
APFr1.0.2aplot0.2.1
approximator1.2-8ARCensReg3.0.1
ArchaeoChron0.1ArchaeoPhases1.8
ArDec2.1-1ARDL0.2.4
ardl.nardl1.2.3areal0.1.8
arfima1.8-1argparse2.2.2
arm1.13-1aroma.apd0.7.0
arrangements1.1.9arrow13.0.0
ars0.6ascii2.4
asd2.2ash1.0-15
ashr2.2-63askpass1.2.0
aspect1.0-6ASSA2.0
assertthat0.2.1AssetCorr1.0.4
astsa2.0asymmetry2.0.4
ata1.1.1aTSA3.1.2
attempt0.3.1attention0.3.0
AUC0.3.2audio0.1-11
autoFRK1.4.3autoimage2.2.3
automap1.1-9autostsm3.1.0
av0.8.4aweek1.0.3
aws2.5-3awsMethods1.1-1
BACCO2.1-0BACCT1.0
backports1.4.1backtest0.3-4
baggr0.7.6bain0.2.9
BalancedSampling1.6.3BaM1.0.3
bama1.3.0bamdit3.4.0
bamlss1.2-1bang1.0.2
BANOVA1.2.1BART2.9.4
bartBMA1.0bartCause1.0-6
bartMachine1.3.4.1bartMachineJARs1.2.1
BAS1.6.4basad0.3.0
base642.0.1base64enc0.1-3
base64url1.4basicMCMCplots0.2.7
BaSkePro0.1.0BASS1.3.1
BatchExperiments1.4.3BatchJobs1.9
batchmeans1.0-4baycn1.2.0
bayefdr0.2.1bayes4psy1.2.11
bayesAB1.1.3bayesammi0.1.0
bayesanova1.5BayesARIMAX0.1.1
BayesBinMix1.4.1bayesbio1.0.0
bayesboot0.2.2BayesBP1.1
bayesbr0.0.1.0BayesCACE1.2.3
BayesCombo1.0BayesComm0.1-2
bayescopulareg0.1.3bayescount0.9.99-8
BayesCR2.1bayesCT0.99.3
BayesCTDesign0.6.1BayesDA2012.04-1
bayesDccGarch3.0.4bayesdfa1.2.0
bayesdistreg0.1.0bayesDP1.3.6
BayesFactor0.9.12-4.4BayesFM0.1.5
bayesforecast1.0.1bayesGAM0.0.2
bayesGARCH2.1.10BayesGOF5.2
BayesGPfit1.1.0BayesGWQS0.1.1
bayesian0.0.9bayesianETAS1.0.3
Bayesiangammareg0.1.0BayesianGLasso0.2.0
BayesianLaterality0.1.2BayesianNetwork0.3
BayesianTools0.1.8bayesImageS0.6-1
BayesLCA1.9bayesLife5.1-1
bayeslincom1.3.0BayesLN0.2.8
BayesLogit2.1bayesloglin1.0.1
bayeslongitudinal0.1.0bayesm3.1-5
BayesMallows1.3.2BayesMassBal1.1.0
bayesmeta3.3bayesmix0.7-6
bayesnec2.1.0.3bayesplot1.10.0
bayesQR2.4BayesSAE1.0-2
bayestestR0.13.1bayesTFR7.4-0
BayesTools0.2.16BayesTree0.3-1.4
BayesVarSel2.2.5BayesX0.3-2
BAYSTAR0.2-10BB2019.10-1
BBmisc1.13BCBCSF1.0-1
BCC19970.1.1BCE2.2.0
Bchron4.7.6bcp4.0.3
bcpa1.3.2bcrm0.5.4
BDgraph2.72bdsmatrix1.3-6
BE0.2.4beadarray2.50.0
BeadDataPackR1.52.0bearishTrader1.0.2
beepr1.3beeswarm0.4.0
benchmarkme1.0.8benchmarkmeData1.0.4
BenfordTests1.2.0bentcableAR0.3.1
Bergm5.0.6Bessel0.6-0
BEST0.5.4BetaBit2.2
betafunctions1.8.1betareg3.1-4
betategarch3.3BETS0.4.9
bets.covid191.0.0beyondWhittle1.2.0
bezier1.1.2bfast1.6.1
BFpack1.0.0BGGM2.0.4
BGLR1.1.0BGVAR2.5.2
BH1.81.0-1BHH22016.05.31
BiasedUrn2.0.11bibtex0.5.1
bidask1.0.0BIFIEsurvey3.4-15
biganalytics1.1.21bigD0.2.0
biglm0.9-2.1bigmemory4.6.1
bigmemory.sri0.1.6bigrquery1.4.2
bigsplines1.1-1bigtime0.2.3
BigVAR1.1.2bindr0.1.1
bindrcpp0.2.2binom1.1-1.1
binomSamSize0.1-5binr1.1.1
binseqtest1.0.4Biobase2.60.0
BiocGenerics0.46.0BiocManager1.30.22
BiocParallel1.34.1BiocVersion3.17.1
bioinactivation1.2.3biomformat1.28.0
bioOED0.2.1Biostrings2.68.0
birtr1.0.0bit4.0.5
bit644.0.5bitops1.0-7
biwavelet0.20.21bizdays1.0.13
bkmr0.2.2blaise1.3.10
blastula0.3.3blavaan0.5-1
BLModel1.0.2blob1.2.4
blocklength0.1.5blockrand1.5
blocksdesign4.9blockTools0.6.4
BLR1.6BMA3.18.17
bmgarch2.0.0bmixture1.7
BMS0.3.5BMTAR0.1.1
bnlearn4.9BNPTSclust2.0
BNSP2.2.3boa1.1.8-2
boilerpipeR1.3.2BOIN2.7.2
bold1.3.0Bolstad0.2-41
Bolstad21.0-29bondAnalyst1.0.1
bookdown0.35Boom0.9.11
BoomSpikeSlab1.2.5bootnet1.5.5
BootPR1.0bootstrap2019.6
bootUR1.0.2bpca1.3-4
bqtl1.0-35BradleyTerry21.1-2
brainR1.6.0breakfast2.3
brew1.0-8brglm0.7.2
brglm20.9bridgesampling1.1-2
brio1.1.3brms2.20.3
Brobdingnag1.2-9broman0.80
broom1.0.5bsam1.1.3
bsamGP1.2.4bslib0.5.1
BsMD2023.707bspec1.6
bspmma0.1-2bssm2.0.1
BSSprep0.1bsts0.9.9
bsvars1.0.0BTLLasso0.1-11
BTM0.3.7bullishTrader1.0.1
bundesbank0.1-9BurStFin1.3
BurStMisc1.1BVAR1.0.4
bvartools0.2.3ca0.71.1
cabootcrs2.1.0cachem1.0.8
cacIRT1.4CADFtest0.3-3
caffsim0.2.2Cairo1.6-1
calculus1.0.1CalibrateSSB1.3.0
calibrator1.2-8callr3.7.3
cancensus0.5.5candisc0.8-6
CANSIM2R1.14.1car3.1-2
CARBayes6.0CARBayesdata3.0
CARBayesST3.3.1carData3.0-5
caret6.0-94carfima2.0.2
caribou1.1-1cartogram0.3.0
caTools1.18.2catR3.17
causact0.5.3CausalImpact1.3.0
CAvariants5.9cbsodataR0.5.1
cccp0.2-9cdlTools0.15
CDM8.2-6cds1.0.3
CellNOptR1.46.0cellranger1.1.0
censusapi0.8.0CFtime1.0.0
ChainLadder0.2.18chandwich1.1.6
changepoint2.2.4changepoint.geo1.0.1
changepoint.np1.0.5checkLuhn1.1.0
checkmate2.2.0cherryblossom0.1.0
chilemapas0.3.0chk0.9.0
choiceDes0.9-3CholWishart1.1.2
chron2.3-61cifti0.4.5
cinterpolate1.0.0CircSpaceTime0.9.0
CircStats0.2-6circular0.5-0
ciTools0.6.1classInt0.4-10
cli3.6.1clime0.5.0
clinDR2.4.1clinfun1.1.3
clinicalsignificance1.2.0clinPK0.11.1
clinsig1.2clipr0.8.0
clisymbols1.2.0clock0.7.0
clue0.3-64clustDRM0.1-0
clusterGeneration1.3.8clusterPower0.7.0
ClustVarLV2.1.1clv0.3-2.3
cmaes1.0-12CMLS1.0-1
cmm1.0cmocean0.3-1
cmprsk2.2-11cmrutils1.3.1
cNORM3.0.3CNORode1.42.0
coalescentMCMC0.4-4coalitions0.6.24
coarseDataTools0.6-6cobalt4.5.1
coconots1.1.2cocor1.1-4
cocorresp0.4-3cocron1.0-1
coda0.19-4coin1.4-2
cointReg0.2.0collapse1.9.6
collapsibleTree0.1.7colorRamps2.3.1
colorspace2.1-0colourpicker1.3.0
colourvalues0.3.9combinat0.0-8
CombinS1.1-1CommonJavaJars1.0-6
commonmark1.9.0compare0.2-6
CompQuadForm1.4.3conditionz0.1.0
conf.design2.0.0config0.3.2
conflicted1.2.0conquer1.3.3
conquestr1.0.7contactdata1.0.0
contfrac1.1-12convey0.2.5
cops1.3-1copula1.1-2
copulaData0.0-1cordillera1.0-0
coro1.0.3corona0.3.0
coronavirus0.4.1corpcor1.6.10
corpora0.6corporaexplorer0.8.6
corrgram1.14corrplot0.92
cosa2.1.0costat2.4.1
countrycode1.5.0COVID193.0.3
covid19.analytics2.1.3.1covid19br0.1.6
covid19dbcand0.1.1covid19france0.1.0
covid19italy0.3.1covid19sf0.1.2
covid19swiss0.1.0covid19us0.1.9
CovidMutations0.1.3cowplot1.1.1
CPBayes1.1.0cpk1.3-1
cplm0.7-11cpp110.4.6
crawl2.3.0crayon1.5.2
credentials2.0.1credule0.1.4
crfsuite0.4.1CRM1.2.4
crmPack1.0.3crossdes1.1-2
Crossover0.1-21crosstalk1.2.0
crs0.15-37crseEventStudy1.2.2
crsmeta0.3.0crul1.4.0
cSEM0.5.0cshapes2.0
csodata1.4.2cstab0.2-2
csv0.6.2ctbi2.0.5
ctmcmove1.2.9ctmm1.1.0
ctrdata1.15.1CTT2.3.3
CTTShiny0.1ctv0.9-5
cubature2.1.0cubble0.3.0
Cubist0.4.2.1curl5.0.2
cvar0.5cvAUC1.1.4
CVST0.2-3CVXR1.0-11
d3Network0.5.2.1DAAG1.25.4
dae3.2.19daewr1.2-11
dagitty0.3-1DAKS2.1-3
DALEX2.4.3data.table1.14.8
data.tree1.0.0DatabaseConnector6.2.4
DataExplorer0.8.2datapasta3.1.0
dataseries0.2.0datawizard0.9.0
date1.2-42datetimeutils0.6-1
dbarts0.9-23DBI1.1.3
DBItest1.7.3dbmss2.8-2
dbparser2.0.1dbplyr2.3.3
dbscan1.1-11dbx0.2.8
DChaos0.1-7dclone2.3-2
DCluster0.2-9DClusterm1.0-1
dcov0.1.1dCovTS1.3
dcurver0.9.2dde1.0.4
deBInfer0.4.4debugme1.1.0
deducorrect1.3.7deductive1.0.0
deldir1.0-9deltaPlotR1.6
dendextend1.17.1densEstBayes1.0-2.2
DEoptim2.2-8DEoptimR1.1-2
depmix0.9.16depmixS41.5-0
DepthProc2.1.5Deriv4.1.3
derivmkts0.2.5desc1.4.2
DescTools0.99.50designmatch0.5.4
desirability2.1deSolve1.38
desplot1.10devtools2.4.5
dexter1.2.2dextergui0.2.6
dexterMST0.9.3dfcomb3.1-1
dfcrm0.2-2.1dfidx0.0-5
DFIT1.1dfms0.2.1
dfmta1.7-3dfoptim2023.1.0
dfped1.1dfpk3.5.1
DHARMa0.4.6DHS.rates0.9.1
diagis0.2.3diagonals6.4.0
diagram1.6.5DiagrammeR1.0.10
dials1.2.0DiceDesign1.9
DiceEval1.5.1DiceKriging1.6.0
DiceView2.1-0dichromat2.0-0.1
DICOMread0.0.0.3DIFboost0.3
diffobj0.3.5diffpriv0.4.2
diffusion0.2.7DIFlasso1.0-4
difNLR1.4.2-1DIFplus1.1
difR5.1DIFtree3.1.6
digest0.6.33DIMORA0.3.5
dimRed0.2.6dina2.0.0
dipsaus0.2.8diptest0.76-0
Dire2.1.1DIRECT1.1.0
directlabels2023.8.25dirichletprocess0.4.2
disaggR1.0.5discretization1.0-1.1
DistatisR1.1.1distcrete1.0.3
distfree.cr1.5.1distr2.9.2
distrEx2.9.0distributional0.3.2
distributions30.2.1DistributionUtils0.6-1
distrom1.0.1distrTeach2.9.0
dittodb0.1.7divest0.10.3
divseg0.0.5dLagM1.1.12
dlm1.1-6dlnm2.4.7
dlstats0.1.7dmri.tracking0.1.0
doBy4.6.18doc2vec0.2.0
docopulae0.4.0DoE.base1.2-2
DoE.MIParray1.0-1DoE.wrapper0.12
doMC1.3.8doParallel1.0.17
doRNG1.8.6DoseFinding1.0-5
doSNOW1.0.20DOSPortfolio0.1.0
dotCall641.0-2Dowd0.12
downlit0.4.3downloader0.4
dparser1.3.1-10dplyr1.1.3
dqrng0.3.1dr4pl2.0.0
DriftBurstHypothesis0.4.0.1DRR0.0.4
dsa1.0.12DSAIDE0.9.6
dse2020.2-1DSI1.5.0
DSL0.1-7DT0.29
DTAT0.3-6DtD0.2.2
dti1.5.4dtplyr1.3.1
DTSg1.1.1dtt0.1-2
dtts0.1.1dtw1.23-1
dtwclust5.5.12duckdb0.8.1-3
dygraphs1.1.1.6dyn0.2-9.6
dynamicTreeCut1.63-1dynaTree1.2-16
dynlm0.3-6e10711.7-13
earlyR0.0.5earth5.3.2
easypower1.0.1easySdcTable1.0.7
eba1.10-0EbayesThresh1.4-12
ebdbNet1.2.8EBImage4.42.0
EBMAforecast1.0.3ecb0.4.2
Ecdat0.4-2ecespa1.1-17
Ecfun0.3-2ecm7.0.0
ecodist2.0.9ECOSolveR0.5.5
ecp3.1.5edfReader1.2.1
edgeR3.42.2edina0.1.1
editrules2.9.3edmdata1.2.0
edstan1.0.6EdSurvey4.0.1
eegkit1.0-4eegkitdata1.1
EFAutilities2.1.3effects4.2-2
EGAnet2.0.1egg0.4.5
egor1.23.3eha2.11.0
eigenmodel1.11elastic1.2.0
elasticnet1.3elevatr0.99.0
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tensorTS1.0.1TEQR6.0-0
tergm4.2.0terra1.7-46
tesseract5.1.0testcorr0.2.0
TestDataImputation2.3TestDesign1.5.1
tester0.1.7testit0.13
TestScorer1.7.2testthat3.1.10
TexExamRandomizer1.2.3texreg1.38.6
text2vec0.6.3textcat1.0-8
textir2.0-5textplot0.2.2
textrank0.3.1textreuse0.1.5
textshaping0.3.6textTinyR1.1.7
tfarima0.3.2tfautograph0.3.2
tfdatasets2.9.0tfio0.4.1
tfplot2021.6-1tframe2015.12-1.1
tfruns1.5.1tgp2.4-21
TH.data1.1-2theft0.5.3
thief0.3ThreeArmedTrials1.0-4
threeBrain1.0.1ThreeGroups0.21
threejs0.3.3ThreeWay1.1.3
thurstonianIRT0.12.3tibble3.2.1
tibbletime0.1.8tictoc1.2
Tides2.1tidyBdE0.3.4
tidycensus1.4.4tidygraph1.2.3
tidyLPA1.1.0tidymodels1.1.1
tidyquant1.0.7tidyqwi0.1.2
tidyr1.3.0tidyselect1.2.0
tidytext0.4.1tidytree0.4.5
tidyverse2.0.0tiff0.1-11
tigris2.0.3timechange0.2.0
timeDate4022.108timeSeries4031.107
timeseriesdb1.0.0-1.1.2timetk2.8.3
timsac1.3.8-2tinytex0.46
tis1.39tkrplot0.0-27
tm0.7-11tm.plugin.alceste1.1
tm.plugin.dc0.2-10tm.plugin.europresse1.4
tm.plugin.factiva1.8tm.plugin.lexisnexis1.4.1
tm.plugin.mail0.2-2tmap3.3-4
tmaptools3.1-1TMB1.9.6
tmvnsim1.0-2tmvtnorm1.5
tokenizers0.3.0tokenizers.bpe0.1.3
toOrdinal1.3-0.0topicdoc0.1.1
topicmodels0.2-14topicmodels.etm0.1.0
torch0.11.0torchaudio0.3.1.9000
torchdatasets0.3.0torchvision0.5.1
tpr0.3-3trackdem0.6
trackdf0.3.2trackeR1.5.2
trackeRapp1.2TrackReconstruction1.3
tractor.base3.3.5.1traipse0.3.0
trajectories0.2-7trajr1.5.0
TransPhylo1.4.5trapezoid2.0-2
tree1.0-43TreeBUGS1.5.0
treeio1.24.0treemap2.4-4
trend1.1.5trendeval0.1.0
trending0.1.0TrialSize1.4
triangle1.0triebeard0.4.1
trimcluster0.1-5trip1.10.0
tripack1.3-9.1tripEstimation0.0-46
TripleR1.5.4TruncatedNormal2.2.2
truncdist1.0-2truncnorm1.0-9
truncreg0.2-5trust0.1-8
TSA1.3.1TSANN0.1.0
tsbox0.4.1tsBSS1.0.0
TSclust1.3.1tscount1.4.3
tsdb1.1-0tsdecomp0.2
TSdeeplearning0.1.0tsdisagg20.1.0
TSdisaggregation2.0.0TSdist3.7.1
tsDyn11.0.4TSEntropies0.9
tseries0.10-54tseriesChaos0.1-13.1
tseriesEntropy0.7-2tseriesTARMA0.3-2
tsfeatures1.1.1tsfknn0.5.2
tsibble1.1.3tsibbledata0.4.1
tsibbletalk0.1.0tsintermittent1.10
tsiR0.4.3TSLSTM0.1.0
tsModel0.6-1tsoutliers0.6-8
TSP1.2-4tsPI1.0.4
TSrepr1.1.0tsrobprep0.3.2
tssim0.1.7TSstudio0.1.7
TSTutorial1.2.7tsutils0.9.3
tswge2.1.0TTR0.24.3
tune1.1.2turner0.1.7
tvm0.5.2tweedie2.3.5
tweenr2.0.2twosamples2.0.1
tzdb0.4.0ubiquity2.0.0
ucminf1.2.0UComp4.0.2
udpipe0.8.11ufRisk1.0.6
ugatsdb0.2.3uGMAR3.4.5
UnifiedDoseFinding0.1.10units0.8-4
univOutl0.4unrepx1.0-2
uptasticsearch0.4.0urca1.3-3
urlchecker1.0.1urltools1.7.3
uroot2.1-2usdata0.2.0
usethis2.2.2usmap0.6.2
usmapdata0.1.0utf81.2.3
uuid1.1-1uwot0.1.16
V84.3.3validate1.1.3
validatetools0.5.0vapour0.9.5
VAR.etp1.1VARDetect0.1.6
vardiag0.2-1vardpoor0.20.1
VaRES1.0.2vars1.5-9
VARshrink0.3.1varycoef0.3.4
VCA1.4.5vcd1.4-11
vcdExtra0.8-5vctrs0.6.3
vdg1.2.2VedicDateTime0.1.7
vegan2.6-4VennDiagram1.7.3
venneuler1.1-3VGAM1.1-8
VGAMdata1.1-8vglmer1.0.3
VIM6.2.2VineCopula2.5.0
viridis0.6.4viridisLite0.4.2
visNetwork2.1.2visualize4.4.0
volatilityTrader1.0.1vpc1.2.2
vroom1.6.3vrtest1.2
waiter0.2.5waldo0.5.1
warp0.2.0Watersheds1.1
WaveletComp1.1wavelets0.3-0.2
WaveSampling0.1.3waveslim1.8.4
wavethresh4.7.2wavScalogram1.1.2
wCorr1.9.8WDI2.7.8
webdriver1.0.6webshot0.5.5
WeightIt0.14.2weights1.0.4
WeMix4.0.0whisker0.4.1
whitebox2.3.1widgetframe0.3.1
WikidataQueryServiceR1.0.0WikidataR2.3.3
WikipediR1.5.0wikitaxa0.4.0
wildlifeDI0.5.0wINEQ1.2.0
withr2.5.0wk0.8.0
wktmo1.0.5wkutils0.1.3
wnl0.7.3wooldridge1.4-3
word2vec0.3.4wordcloud2.6
wordnet0.1-16workflows1.1.3
workflowsets1.0.1worrms0.4.3
wpp20171.2-3wpp20191.1-1
WrightMap1.3writexl1.4.2
wrswoR1.1.1x121.10.3
x13binary1.1.57-4XBRL0.99.19.1
xfun0.40xgboost1.7.5.1
xgxr1.1.2XLConnect1.0.7
xlsx0.6.5xlsxjars0.6.1
XML3.99-0.14xml21.3.5
xopen1.0.0xplain0.2.2
xpose0.4.17xpose.nlmixr20.4.0
xpose44.7.2xtable1.8-4
xts0.13.1XVector0.40.0
xxIRT2.1.2yaImpute1.0-33
yaml2.3.7yardstick1.2.0
yesno0.1.2yuima1.15.22
yulab.utils0.0.9zeallot0.1.0
zic0.9.1ZIM1.1.0
ZINARp0.1.0zip2.3.0
zipfR0.6-70zlibbioc1.46.0
zoo1.8-12ZRA0.2

RStudio Server

R: 4.3.1

rstudio-server: 2023.06.2+561

CUDA Version: 11.7

GPU Driver Version: 515.43.04

Release Notes

Added packages argparse, lpSolveAPI and telegram.bot

R: 4.3.1; rstudio-server: 2023.06.2+561; CUDA Version: 11.7; GPU Driver Version: 515.43.04

This AMI provides thousands of R packages covering various domains such as data science, machine learning, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, and natural language processing.

R packages (2903)

packageversionpackageversion
abc2.2.1abc.data1.0
abcrf1.9abglasso0.1.1
abind1.4-5abtest1.0.1
accrualPlot1.0.7acebayes1.10
acepack1.4.2acp2.1
acs2.1.4ACSWR1.0
actuar3.3-2ada2.0-5
adagio0.8.5adaptivetau2.2-3
adaptMCMC1.4adaptr1.3.2
adaptsmoFMRI1.2adaptTest1.1
ade41.7-22ade4TkGUI0.3-1
adegenet2.1.10adegraphics1.0-18
adehabitatHR0.4.21adehabitatHS0.3.17
adehabitatLT0.3.27adehabitatMA0.3.16
ADGofTest0.3adimpro0.9.6
admisc0.33AdMit2.1.9
ads1.5-9AER1.2-10
affy1.78.0affyio1.70.0
africamonitor0.2.3agricolae1.3-6
agricolaeplotr0.3.1agridat1.22
airports0.1.0akima0.6-3.4
alabama2023.1.0AlgDesign1.2.1
almanac1.0.0alphavantager0.1.3
ALTopt0.1.2Amelia1.8.1
AmericanCallOpt0.95ammiBayes1.0-1
AMR2.1.0AnaCoDa0.1.4.4
anacor1.1-4anesrake0.80
animation2.7anipaths0.10.2
AnnotationDbi1.62.1anytime0.3.9
aod1.3.2aoos0.5.0
AovBay0.1.0ape5.7-1
APFr1.0.2aplot0.2.1
approximator1.2-8ARCensReg3.0.1
ArchaeoChron0.1ArchaeoPhases1.8
ArDec2.1-1ARDL0.2.4
ardl.nardl1.2.3areal0.1.8
arfima1.8-1argparse2.2.2
arm1.13-1aroma.apd0.7.0
arrangements1.1.9arrow13.0.0
ars0.6ascii2.4
asd2.2ash1.0-15
ashr2.2-63askpass1.2.0
aspect1.0-6ASSA2.0
assertthat0.2.1AssetCorr1.0.4
astsa2.0asymmetry2.0.4
ata1.1.1aTSA3.1.2
attempt0.3.1attention0.3.0
AUC0.3.2audio0.1-11
autoFRK1.4.3autoimage2.2.3
automap1.1-9autostsm3.1.0
av0.8.4aweek1.0.3
aws2.5-3awsMethods1.1-1
BACCO2.1-0BACCT1.0
backports1.4.1backtest0.3-4
baggr0.7.6bain0.2.9
BalancedSampling1.6.3BaM1.0.3
bama1.3.0bamdit3.4.0
bamlss1.2-1bang1.0.2
BANOVA1.2.1BART2.9.4
bartBMA1.0bartCause1.0-6
bartMachine1.3.4.1bartMachineJARs1.2.1
BAS1.6.4basad0.3.0
base642.0.1base64enc0.1-3
base64url1.4basicMCMCplots0.2.7
BaSkePro0.1.0BASS1.3.1
BatchExperiments1.4.3BatchJobs1.9
batchmeans1.0-4baycn1.2.0
bayefdr0.2.1bayes4psy1.2.11
bayesAB1.1.3bayesammi0.1.0
bayesanova1.5BayesARIMAX0.1.1
BayesBinMix1.4.1bayesbio1.0.0
bayesboot0.2.2BayesBP1.1
bayesbr0.0.1.0BayesCACE1.2.3
BayesCombo1.0BayesComm0.1-2
bayescopulareg0.1.3bayescount0.9.99-8
BayesCR2.1bayesCT0.99.3
BayesCTDesign0.6.1BayesDA2012.04-1
bayesDccGarch3.0.4bayesdfa1.2.0
bayesdistreg0.1.0bayesDP1.3.6
BayesFactor0.9.12-4.4BayesFM0.1.5
bayesforecast1.0.1bayesGAM0.0.2
bayesGARCH2.1.10BayesGOF5.2
BayesGPfit1.1.0BayesGWQS0.1.1
bayesian0.0.9bayesianETAS1.0.3
Bayesiangammareg0.1.0BayesianGLasso0.2.0
BayesianLaterality0.1.2BayesianNetwork0.3
BayesianTools0.1.8bayesImageS0.6-1
BayesLCA1.9bayesLife5.1-1
bayeslincom1.3.0BayesLN0.2.8
BayesLogit2.1bayesloglin1.0.1
bayeslongitudinal0.1.0bayesm3.1-5
BayesMallows1.3.2BayesMassBal1.1.0
bayesmeta3.3bayesmix0.7-6
bayesnec2.1.0.3bayesplot1.10.0
bayesQR2.4BayesSAE1.0-2
bayestestR0.13.1bayesTFR7.4-0
BayesTools0.2.16BayesTree0.3-1.4
BayesVarSel2.2.5BayesX0.3-2
BAYSTAR0.2-10BB2019.10-1
BBmisc1.13BCBCSF1.0-1
BCC19970.1.1BCE2.2.0
Bchron4.7.6bcp4.0.3
bcpa1.3.2bcrm0.5.4
BDgraph2.72bdsmatrix1.3-6
BE0.2.4beadarray2.50.0
BeadDataPackR1.52.0bearishTrader1.0.2
beepr1.3beeswarm0.4.0
benchmarkme1.0.8benchmarkmeData1.0.4
BenfordTests1.2.0bentcableAR0.3.1
Bergm5.0.6Bessel0.6-0
BEST0.5.4BetaBit2.2
betafunctions1.8.1betareg3.1-4
betategarch3.3BETS0.4.9
bets.covid191.0.0beyondWhittle1.2.0
bezier1.1.2bfast1.6.1
BFpack1.0.0BGGM2.0.4
BGLR1.1.0BGVAR2.5.2
BH1.81.0-1BHH22016.05.31
BiasedUrn2.0.11bibtex0.5.1
bidask1.0.0BIFIEsurvey3.4-15
biganalytics1.1.21bigD0.2.0
biglm0.9-2.1bigmemory4.6.1
bigmemory.sri0.1.6bigrquery1.4.2
bigsplines1.1-1bigtime0.2.3
BigVAR1.1.2bindr0.1.1
bindrcpp0.2.2binom1.1-1.1
binomSamSize0.1-5binr1.1.1
binseqtest1.0.4Biobase2.60.0
BiocGenerics0.46.0BiocManager1.30.22
BiocParallel1.34.1BiocVersion3.17.1
bioinactivation1.2.3biomformat1.28.0
bioOED0.2.1Biostrings2.68.0
birtr1.0.0bit4.0.5
bit644.0.5bitops1.0-7
biwavelet0.20.21bizdays1.0.13
bkmr0.2.2blaise1.3.10
blastula0.3.3blavaan0.5-1
BLModel1.0.2blob1.2.4
blocklength0.1.5blockrand1.5
blocksdesign4.9blockTools0.6.4
BLR1.6BMA3.18.17
bmgarch2.0.0bmixture1.7
BMS0.3.5BMTAR0.1.1
bnlearn4.9BNPTSclust2.0
BNSP2.2.3boa1.1.8-2
boilerpipeR1.3.2BOIN2.7.2
bold1.3.0Bolstad0.2-41
Bolstad21.0-29bondAnalyst1.0.1
bookdown0.35Boom0.9.11
BoomSpikeSlab1.2.5bootnet1.5.5
BootPR1.0bootstrap2019.6
bootUR1.0.2bpca1.3-4
bqtl1.0-35BradleyTerry21.1-2
brainR1.6.0breakfast2.3
brew1.0-8brglm0.7.2
brglm20.9bridgesampling1.1-2
brio1.1.3brms2.20.3
Brobdingnag1.2-9broman0.80
broom1.0.5bsam1.1.3
bsamGP1.2.4bslib0.5.1
BsMD2023.707bspec1.6
bspmma0.1-2bssm2.0.1
BSSprep0.1bsts0.9.9
bsvars1.0.0BTLLasso0.1-11
BTM0.3.7bullishTrader1.0.1
bundesbank0.1-9BurStFin1.3
BurStMisc1.1BVAR1.0.4
bvartools0.2.3ca0.71.1
cabootcrs2.1.0cachem1.0.8
cacIRT1.4CADFtest0.3-3
caffsim0.2.2Cairo1.6-1
calculus1.0.1CalibrateSSB1.3.0
calibrator1.2-8callr3.7.3
cancensus0.5.5candisc0.8-6
CANSIM2R1.14.1car3.1-2
CARBayes6.0CARBayesdata3.0
CARBayesST3.3.1carData3.0-5
caret6.0-94carfima2.0.2
caribou1.1-1cartogram0.3.0
caTools1.18.2catR3.17
causact0.5.3CausalImpact1.3.0
CAvariants5.9cbsodataR0.5.1
cccp0.2-9cdlTools0.15
CDM8.2-6cds1.0.3
CellNOptR1.46.0cellranger1.1.0
censusapi0.8.0CFtime1.0.0
ChainLadder0.2.18chandwich1.1.6
changepoint2.2.4changepoint.geo1.0.1
changepoint.np1.0.5checkLuhn1.1.0
checkmate2.2.0cherryblossom0.1.0
chilemapas0.3.0chk0.9.0
choiceDes0.9-3CholWishart1.1.2
chron2.3-61cifti0.4.5
cinterpolate1.0.0CircSpaceTime0.9.0
CircStats0.2-6circular0.5-0
ciTools0.6.1classInt0.4-10
cli3.6.1clime0.5.0
clinDR2.4.1clinfun1.1.3
clinicalsignificance1.2.0clinPK0.11.1
clinsig1.2clipr0.8.0
clisymbols1.2.0clock0.7.0
clue0.3-64clustDRM0.1-0
clusterGeneration1.3.8clusterPower0.7.0
ClustVarLV2.1.1clv0.3-2.3
cmaes1.0-12CMLS1.0-1
cmm1.0cmocean0.3-1
cmprsk2.2-11cmrutils1.3.1
cNORM3.0.3CNORode1.42.0
coalescentMCMC0.4-4coalitions0.6.24
coarseDataTools0.6-6cobalt4.5.1
coconots1.1.2cocor1.1-4
cocorresp0.4-3cocron1.0-1
coda0.19-4coin1.4-2
cointReg0.2.0collapse1.9.6
collapsibleTree0.1.7colorRamps2.3.1
colorspace2.1-0colourpicker1.3.0
colourvalues0.3.9combinat0.0-8
CombinS1.1-1CommonJavaJars1.0-6
commonmark1.9.0compare0.2-6
CompQuadForm1.4.3conditionz0.1.0
conf.design2.0.0config0.3.2
conflicted1.2.0conquer1.3.3
conquestr1.0.7contactdata1.0.0
contfrac1.1-12convey0.2.5
cops1.3-1copula1.1-2
copulaData0.0-1cordillera1.0-0
coro1.0.3corona0.3.0
coronavirus0.4.1corpcor1.6.10
corpora0.6corporaexplorer0.8.6
corrgram1.14corrplot0.92
cosa2.1.0costat2.4.1
countrycode1.5.0COVID193.0.3
covid19.analytics2.1.3.1covid19br0.1.6
covid19dbcand0.1.1covid19france0.1.0
covid19italy0.3.1covid19sf0.1.2
covid19swiss0.1.0covid19us0.1.9
CovidMutations0.1.3cowplot1.1.1
CPBayes1.1.0cpk1.3-1
cplm0.7-11cpp110.4.6
crawl2.3.0crayon1.5.2
credentials2.0.1credule0.1.4
crfsuite0.4.1CRM1.2.4
crmPack1.0.3crossdes1.1-2
Crossover0.1-21crosstalk1.2.0
crs0.15-37crseEventStudy1.2.2
crsmeta0.3.0crul1.4.0
cSEM0.5.0cshapes2.0
csodata1.4.2cstab0.2-2
csv0.6.2ctbi2.0.5
ctmcmove1.2.9ctmm1.1.0
ctrdata1.15.1CTT2.3.3
CTTShiny0.1ctv0.9-5
cubature2.1.0cubble0.3.0
Cubist0.4.2.1curl5.0.2
cvar0.5cvAUC1.1.4
CVST0.2-3CVXR1.0-11
d3Network0.5.2.1DAAG1.25.4
dae3.2.19daewr1.2-11
dagitty0.3-1DAKS2.1-3
DALEX2.4.3data.table1.14.8
data.tree1.0.0DatabaseConnector6.2.4
DataExplorer0.8.2datapasta3.1.0
dataseries0.2.0datawizard0.9.0
date1.2-42datetimeutils0.6-1
dbarts0.9-23DBI1.1.3
DBItest1.7.3dbmss2.8-2
dbparser2.0.1dbplyr2.3.3
dbscan1.1-11dbx0.2.8
DChaos0.1-7dclone2.3-2
DCluster0.2-9DClusterm1.0-1
dcov0.1.1dCovTS1.3
dcurver0.9.2dde1.0.4
deBInfer0.4.4debugme1.1.0
deducorrect1.3.7deductive1.0.0
deldir1.0-9deltaPlotR1.6
dendextend1.17.1densEstBayes1.0-2.2
DEoptim2.2-8DEoptimR1.1-2
depmix0.9.16depmixS41.5-0
DepthProc2.1.5Deriv4.1.3
derivmkts0.2.5desc1.4.2
DescTools0.99.50designmatch0.5.4
desirability2.1deSolve1.38
desplot1.10devtools2.4.5
dexter1.2.2dextergui0.2.6
dexterMST0.9.3dfcomb3.1-1
dfcrm0.2-2.1dfidx0.0-5
DFIT1.1dfms0.2.1
dfmta1.7-3dfoptim2023.1.0
dfped1.1dfpk3.5.1
DHARMa0.4.6DHS.rates0.9.1
diagis0.2.3diagonals6.4.0
diagram1.6.5DiagrammeR1.0.10
dials1.2.0DiceDesign1.9
DiceEval1.5.1DiceKriging1.6.0
DiceView2.1-0dichromat2.0-0.1
DICOMread0.0.0.3DIFboost0.3
diffobj0.3.5diffpriv0.4.2
diffusion0.2.7DIFlasso1.0-4
difNLR1.4.2-1DIFplus1.1
difR5.1DIFtree3.1.6
digest0.6.33DIMORA0.3.5
dimRed0.2.6dina2.0.0
dipsaus0.2.8diptest0.76-0
Dire2.1.1DIRECT1.1.0
directlabels2023.8.25dirichletprocess0.4.2
disaggR1.0.5discretization1.0-1.1
DistatisR1.1.1distcrete1.0.3
distfree.cr1.5.1distr2.9.2
distrEx2.9.0distributional0.3.2
distributions30.2.1DistributionUtils0.6-1
distrom1.0.1distrTeach2.9.0
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STARTS1.3-8startupmsg0.9.6
statcanR0.2.6statcodelists0.9.2
statebins1.4.0statespacer0.5.0
StatMatch1.4.1statmod1.5.0
statnet.common4.9.0StatRank0.0.6
steadyICA1.0STFTS0.1.0
stinepack1.4stlplus0.5.1
stm1.3.6.1STMedianPolish0.2
stochvol3.2.1stockAnalyst1.0.1
stopwords2.3storr1.2.5
stR0.6strand0.2.0
stratification2.2-7stringdist0.9.10
stringfish0.15.8stringi1.7.12
stringr1.5.0strucchange1.5-3
strucchangeRcpp1.5-3-1.0.4StructuralDecompose0.1.1
styler1.10.2subplex1.8
subscore3.3sufficientForecasting0.1.0
sugrrants0.2.8SuperLearner2.0-28.1
superml0.5.6SuppDists1.1-9.7
support.CEs0.6-0survcomp1.50.0
surveillance1.21.1survey4.2-1
surveybootstrap0.0.3surveydata0.2.7
surveyoutliers0.1surveyplanning4.0
surveysd1.3.1survivalROC1.0.3.1
survPresmooth1.1-11svars1.3.11
svd0.5.4.1SVDNF0.1.8
svglite2.1.1svrep0.6.3
svs3.0.0svUnit1.0.6
swephR0.3.1swirl2.4.5
swirlify0.5.3sylly0.1-6
sym.arma1.0symengine0.2.2
symmoments1.2.1synthACS1.7.1
synthesis1.2.3synthpop1.8-0
sys3.4.2systemfit1.1-30
systemfonts1.0.4tables0.9.17
tabnet0.4.0TAM4.1-4
TAQMNGR2018.5-1targets1.3.0
tau0.0-24taxize0.9.100
tbrf0.1.5tcltk21.2-11
Tcomp1.0.1tdigest0.4.1
TeachingDemos2.12telegram.bot3.0.0
tempdisagg1.1.1tensor1.5
tensorA0.36.2tensorflow2.13.0
TensorPreAve1.1.0tensorTS1.0.1
TEQR6.0-0tergm4.2.0
terra1.7-46tesseract5.1.0
testcorr0.2.0TestDataImputation2.3
TestDesign1.5.1tester0.1.7
testit0.13TestScorer1.7.2
testthat3.1.10TexExamRandomizer1.2.3
texreg1.38.6text2vec0.6.3
textcat1.0-8textir2.0-5
textplot0.2.2textrank0.3.1
textreuse0.1.5textshaping0.3.6
textTinyR1.1.7tfarima0.3.2
tfautograph0.3.2tfdatasets2.9.0
tfio0.4.1tfplot2021.6-1
tframe2015.12-1.1tfruns1.5.1
tgp2.4-21TH.data1.1-2
theft0.5.3thief0.3
ThreeArmedTrials1.0-4threeBrain1.0.1
ThreeGroups0.21threejs0.3.3
ThreeWay1.1.3thurstonianIRT0.12.3
tibble3.2.1tibbletime0.1.8
tictoc1.2Tides2.1
tidyBdE0.3.4tidycensus1.4.4
tidygraph1.2.3tidyLPA1.1.0
tidymodels1.1.1tidyquant1.0.7
tidyqwi0.1.2tidyr1.3.0
tidyselect1.2.0tidytext0.4.1
tidytree0.4.5tidyverse2.0.0
tiff0.1-11tigris2.0.3
timechange0.2.0timeDate4022.108
timeSeries4031.107timeseriesdb1.0.0-1.1.2
timetk2.8.3timsac1.3.8-2
tinytex0.46tis1.39
tkrplot0.0-27tm0.7-11
tm.plugin.alceste1.1tm.plugin.dc0.2-10
tm.plugin.europresse1.4tm.plugin.factiva1.8
tm.plugin.lexisnexis1.4.1tm.plugin.mail0.2-2
tmap3.3-4tmaptools3.1-1
TMB1.9.6tmvnsim1.0-2
tmvtnorm1.5tokenizers0.3.0
tokenizers.bpe0.1.3toOrdinal1.3-0.0
topicdoc0.1.1topicmodels0.2-14
topicmodels.etm0.1.0torch0.11.0
torchaudio0.3.1.9000torchdatasets0.3.0
torchvision0.5.1tpr0.3-3
trackdem0.6trackdf0.3.2
trackeR1.5.2trackeRapp1.2
TrackReconstruction1.3tractor.base3.3.5.1
traipse0.3.0trajectories0.2-7
trajr1.5.0TransPhylo1.4.5
trapezoid2.0-2tree1.0-43
TreeBUGS1.5.0treeio1.24.0
treemap2.4-4trend1.1.5
trendeval0.1.0trending0.1.0
TrialSize1.4triangle1.0
triebeard0.4.1trimcluster0.1-5
trip1.10.0tripack1.3-9.1
tripEstimation0.0-46TripleR1.5.4
TruncatedNormal2.2.2truncdist1.0-2
truncnorm1.0-9truncreg0.2-5
trust0.1-8TSA1.3.1
TSANN0.1.0tsbox0.4.1
tsBSS1.0.0TSclust1.3.1
tscount1.4.3tsdb1.1-0
tsdecomp0.2TSdeeplearning0.1.0
tsdisagg20.1.0TSdisaggregation2.0.0
TSdist3.7.1tsDyn11.0.4
TSEntropies0.9tseries0.10-54
tseriesChaos0.1-13.1tseriesEntropy0.7-2
tseriesTARMA0.3-2tsfeatures1.1.1
tsfknn0.5.2tsibble1.1.3
tsibbledata0.4.1tsibbletalk0.1.0
tsintermittent1.10tsiR0.4.3
TSLSTM0.1.0tsModel0.6-1
tsoutliers0.6-8TSP1.2-4
tsPI1.0.4TSrepr1.1.0
tsrobprep0.3.2tssim0.1.7
TSstudio0.1.7TSTutorial1.2.7
tsutils0.9.3tswge2.1.0
TTR0.24.3tune1.1.2
turner0.1.7tvm0.5.2
tweedie2.3.5tweenr2.0.2
twosamples2.0.1tzdb0.4.0
ubiquity2.0.0ucminf1.2.0
UComp4.0.2udpipe0.8.11
ufRisk1.0.6ugatsdb0.2.3
uGMAR3.4.5UnifiedDoseFinding0.1.10
units0.8-4univOutl0.4
unrepx1.0-2uptasticsearch0.4.0
urca1.3-3urlchecker1.0.1
urltools1.7.3uroot2.1-2
usdata0.2.0usethis2.2.2
usmap0.6.2usmapdata0.1.0
utf81.2.3uuid1.1-1
uwot0.1.16V84.3.3
validate1.1.3validatetools0.5.0
vapour0.9.5VAR.etp1.1
VARDetect0.1.6vardiag0.2-1
vardpoor0.20.1VaRES1.0.2
vars1.5-9VARshrink0.3.1
varycoef0.3.4VCA1.4.5
vcd1.4-11vcdExtra0.8-5
vctrs0.6.3vdg1.2.2
VedicDateTime0.1.7vegan2.6-4
VennDiagram1.7.3venneuler1.1-3
VGAM1.1-8VGAMdata1.1-8
vglmer1.0.3VIM6.2.2
VineCopula2.5.0viridis0.6.4
viridisLite0.4.2visNetwork2.1.2
visualize4.4.0volatilityTrader1.0.1
vpc1.2.2vroom1.6.3
vrtest1.2waiter0.2.5
waldo0.5.1warp0.2.0
Watersheds1.1WaveletComp1.1
wavelets0.3-0.2WaveSampling0.1.3
waveslim1.8.4wavethresh4.7.2
wavScalogram1.1.2wCorr1.9.8
WDI2.7.8webdriver1.0.6
webshot0.5.5WeightIt0.14.2
weights1.0.4WeMix4.0.0
whisker0.4.1whitebox2.3.1
widgetframe0.3.1WikidataQueryServiceR1.0.0
WikidataR2.3.3WikipediR1.5.0
wikitaxa0.4.0wildlifeDI0.5.0
wINEQ1.2.0withr2.5.0
wk0.8.0wktmo1.0.5
wkutils0.1.3wnl0.7.3
wooldridge1.4-3word2vec0.3.4
wordcloud2.6wordnet0.1-16
workflows1.1.3workflowsets1.0.1
worrms0.4.3wpp20171.2-3
wpp20191.1-1WrightMap1.3
writexl1.4.2wrswoR1.1.1
x121.10.3x13binary1.1.57-4
XBRL0.99.19.1xfun0.40
xgboost1.7.5.1xgxr1.1.2
XLConnect1.0.7xlsx0.6.5
xlsxjars0.6.1XML3.99-0.14
xml21.3.5xopen1.0.0
xplain0.2.2xpose0.4.17
xpose.nlmixr20.4.0xpose44.7.2
xtable1.8-4xts0.13.1
XVector0.40.0xxIRT2.1.2
yaImpute1.0-33yaml2.3.7
yardstick1.2.0yesno0.1.2
yuima1.15.22yulab.utils0.0.9
zeallot0.1.0zic0.9.1
ZIM1.1.0ZINARp0.1.0
zip2.3.0zipfR0.6-70
zlibbioc1.46.0zoo1.8-12
ZRA0.2

RStudio Server

R: 4.3.1

rstudio-server: 2023.06.2+561

CUDA Version: 11.7

GPU Driver Version: 515.43.04

Release Notes

Applied security patching; Updated R packages to newer versions; Added R packages for spatial and spatiotemporal analysis; Updated rstudio-server to 2023.06.2+561

R: 4.3.1; rstudio-server: 2023.06.2+561; CUDA Version: 11.7; GPU Driver Version: 515.43.04

This AMI provides thousands of R packages covering various domains such as data science, machine learning, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, and natural language processing.

R packages (2900)

packageversionpackageversion
abc2.2.1abc.data1.0
abcrf1.9abglasso0.1.1
abind1.4-5abtest1.0.1
accrualPlot1.0.7acebayes1.10
acepack1.4.2acp2.1
acs2.1.4ACSWR1.0
actuar3.3-2ada2.0-5
adagio0.8.5adaptivetau2.2-3
adaptMCMC1.4adaptr1.3.2
adaptsmoFMRI1.2adaptTest1.1
ade41.7-22ade4TkGUI0.3-1
adegenet2.1.10adegraphics1.0-18
adehabitatHR0.4.21adehabitatHS0.3.17
adehabitatLT0.3.27adehabitatMA0.3.16
ADGofTest0.3adimpro0.9.6
admisc0.33AdMit2.1.9
ads1.5-9AER1.2-10
affy1.78.0affyio1.70.0
africamonitor0.2.3agricolae1.3-6
agricolaeplotr0.3.1agridat1.22
airports0.1.0akima0.6-3.4
alabama2023.1.0AlgDesign1.2.1
almanac1.0.0alphavantager0.1.3
ALTopt0.1.2Amelia1.8.1
AmericanCallOpt0.95ammiBayes1.0-1
AMR2.1.0AnaCoDa0.1.4.4
anacor1.1-4anesrake0.80
animation2.7anipaths0.10.2
AnnotationDbi1.62.1anytime0.3.9
aod1.3.2aoos0.5.0
AovBay0.1.0ape5.7-1
APFr1.0.2aplot0.2.1
approximator1.2-8ARCensReg3.0.1
ArchaeoChron0.1ArchaeoPhases1.8
ArDec2.1-1ARDL0.2.4
ardl.nardl1.2.3areal0.1.8
arfima1.8-1arm1.13-1
aroma.apd0.7.0arrangements1.1.9
arrow13.0.0ars0.6
ascii2.4asd2.2
ash1.0-15ashr2.2-63
askpass1.2.0aspect1.0-6
ASSA2.0assertthat0.2.1
AssetCorr1.0.4astsa2.0
asymmetry2.0.4ata1.1.1
aTSA3.1.2attempt0.3.1
attention0.3.0AUC0.3.2
audio0.1-11autoFRK1.4.3
autoimage2.2.3automap1.1-9
autostsm3.1.0av0.8.4
aweek1.0.3aws2.5-3
awsMethods1.1-1BACCO2.1-0
BACCT1.0backports1.4.1
backtest0.3-4baggr0.7.6
bain0.2.9BalancedSampling1.6.3
BaM1.0.3bama1.3.0
bamdit3.4.0bamlss1.2-1
bang1.0.2BANOVA1.2.1
BART2.9.4bartBMA1.0
bartCause1.0-6bartMachine1.3.4.1
bartMachineJARs1.2.1BAS1.6.4
basad0.3.0base642.0.1
base64enc0.1-3base64url1.4
basicMCMCplots0.2.7BaSkePro0.1.0
BASS1.3.1BatchExperiments1.4.3
BatchJobs1.9batchmeans1.0-4
baycn1.2.0bayefdr0.2.1
bayes4psy1.2.11bayesAB1.1.3
bayesammi0.1.0bayesanova1.5
BayesARIMAX0.1.1BayesBinMix1.4.1
bayesbio1.0.0bayesboot0.2.2
BayesBP1.1bayesbr0.0.1.0
BayesCACE1.2.3BayesCombo1.0
BayesComm0.1-2bayescopulareg0.1.3
bayescount0.9.99-8BayesCR2.1
bayesCT0.99.3BayesCTDesign0.6.1
BayesDA2012.04-1bayesDccGarch3.0.4
bayesdfa1.2.0bayesdistreg0.1.0
bayesDP1.3.6BayesFactor0.9.12-4.4
BayesFM0.1.5bayesforecast1.0.1
bayesGAM0.0.2bayesGARCH2.1.10
BayesGOF5.2BayesGPfit1.1.0
BayesGWQS0.1.1bayesian0.0.9
bayesianETAS1.0.3Bayesiangammareg0.1.0
BayesianGLasso0.2.0BayesianLaterality0.1.2
BayesianNetwork0.3BayesianTools0.1.8
bayesImageS0.6-1BayesLCA1.9
bayesLife5.1-1bayeslincom1.3.0
BayesLN0.2.8BayesLogit2.1
bayesloglin1.0.1bayeslongitudinal0.1.0
bayesm3.1-5BayesMallows1.3.2
BayesMassBal1.1.0bayesmeta3.3
bayesmix0.7-6bayesnec2.1.0.3
bayesplot1.10.0bayesQR2.4
BayesSAE1.0-2bayestestR0.13.1
bayesTFR7.4-0BayesTools0.2.16
BayesTree0.3-1.4BayesVarSel2.2.5
BayesX0.3-2BAYSTAR0.2-10
BB2019.10-1BBmisc1.13
BCBCSF1.0-1BCC19970.1.1
BCE2.2.0Bchron4.7.6
bcp4.0.3bcpa1.3.2
bcrm0.5.4BDgraph2.72
bdsmatrix1.3-6BE0.2.4
beadarray2.50.0BeadDataPackR1.52.0
bearishTrader1.0.2beepr1.3
beeswarm0.4.0benchmarkme1.0.8
benchmarkmeData1.0.4BenfordTests1.2.0
bentcableAR0.3.1Bergm5.0.6
Bessel0.6-0BEST0.5.4
BetaBit2.2betafunctions1.8.1
betareg3.1-4betategarch3.3
BETS0.4.9bets.covid191.0.0
beyondWhittle1.2.0bezier1.1.2
bfast1.6.1BFpack1.0.0
BGGM2.0.4BGLR1.1.0
BGVAR2.5.2BH1.81.0-1
BHH22016.05.31BiasedUrn2.0.11
bibtex0.5.1bidask1.0.0
BIFIEsurvey3.4-15biganalytics1.1.21
bigD0.2.0biglm0.9-2.1
bigmemory4.6.1bigmemory.sri0.1.6
bigrquery1.4.2bigsplines1.1-1
bigtime0.2.3BigVAR1.1.2
bindr0.1.1bindrcpp0.2.2
binom1.1-1.1binomSamSize0.1-5
binr1.1.1binseqtest1.0.4
Biobase2.60.0BiocGenerics0.46.0
BiocManager1.30.22BiocParallel1.34.1
BiocVersion3.17.1bioinactivation1.2.3
biomformat1.28.0bioOED0.2.1
Biostrings2.68.0birtr1.0.0
bit4.0.5bit644.0.5
bitops1.0-7biwavelet0.20.21
bizdays1.0.13bkmr0.2.2
blaise1.3.10blastula0.3.3
blavaan0.5-1BLModel1.0.2
blob1.2.4blocklength0.1.5
blockrand1.5blocksdesign4.9
blockTools0.6.4BLR1.6
BMA3.18.17bmgarch2.0.0
bmixture1.7BMS0.3.5
BMTAR0.1.1bnlearn4.9
BNPTSclust2.0BNSP2.2.3
boa1.1.8-2boilerpipeR1.3.2
BOIN2.7.2bold1.3.0
Bolstad0.2-41Bolstad21.0-29
bondAnalyst1.0.1bookdown0.35
Boom0.9.11BoomSpikeSlab1.2.5
bootnet1.5.5BootPR1.0
bootstrap2019.6bootUR1.0.2
bpca1.3-4bqtl1.0-35
BradleyTerry21.1-2brainR1.6.0
breakfast2.3brew1.0-8
brglm0.7.2brglm20.9
bridgesampling1.1-2brio1.1.3
brms2.20.3Brobdingnag1.2-9
broman0.80broom1.0.5
bsam1.1.3bsamGP1.2.4
bslib0.5.1BsMD2023.707
bspec1.6bspmma0.1-2
bssm2.0.1BSSprep0.1
bsts0.9.9bsvars1.0.0
BTLLasso0.1-11BTM0.3.7
bullishTrader1.0.1bundesbank0.1-9
BurStFin1.3BurStMisc1.1
BVAR1.0.4bvartools0.2.3
ca0.71.1cabootcrs2.1.0
cachem1.0.8cacIRT1.4
CADFtest0.3-3caffsim0.2.2
Cairo1.6-1calculus1.0.1
CalibrateSSB1.3.0calibrator1.2-8
callr3.7.3cancensus0.5.5
candisc0.8-6CANSIM2R1.14.1
car3.1-2CARBayes6.0
CARBayesdata3.0CARBayesST3.3.1
carData3.0-5caret6.0-94
carfima2.0.2caribou1.1-1
cartogram0.3.0caTools1.18.2
catR3.17causact0.5.3
CausalImpact1.3.0CAvariants5.9
cbsodataR0.5.1cccp0.2-9
cdlTools0.15CDM8.2-6
cds1.0.3CellNOptR1.46.0
cellranger1.1.0censusapi0.8.0
CFtime1.0.0ChainLadder0.2.18
chandwich1.1.6changepoint2.2.4
changepoint.geo1.0.1changepoint.np1.0.5
checkLuhn1.1.0checkmate2.2.0
cherryblossom0.1.0chilemapas0.3.0
chk0.9.0choiceDes0.9-3
CholWishart1.1.2chron2.3-61
cifti0.4.5cinterpolate1.0.0
CircSpaceTime0.9.0CircStats0.2-6
circular0.5-0ciTools0.6.1
classInt0.4-10cli3.6.1
clime0.5.0clinDR2.4.1
clinfun1.1.3clinicalsignificance1.2.0
clinPK0.11.1clinsig1.2
clipr0.8.0clisymbols1.2.0
clock0.7.0clue0.3-64
clustDRM0.1-0clusterGeneration1.3.8
clusterPower0.7.0ClustVarLV2.1.1
clv0.3-2.3cmaes1.0-12
CMLS1.0-1cmm1.0
cmocean0.3-1cmprsk2.2-11
cmrutils1.3.1cNORM3.0.3
CNORode1.42.0coalescentMCMC0.4-4
coalitions0.6.24coarseDataTools0.6-6
cobalt4.5.1coconots1.1.2
cocor1.1-4cocorresp0.4-3
cocron1.0-1coda0.19-4
coin1.4-2cointReg0.2.0
collapse1.9.6collapsibleTree0.1.7
colorRamps2.3.1colorspace2.1-0
colourpicker1.3.0colourvalues0.3.9
combinat0.0-8CombinS1.1-1
CommonJavaJars1.0-6commonmark1.9.0
compare0.2-6CompQuadForm1.4.3
conditionz0.1.0conf.design2.0.0
config0.3.2conflicted1.2.0
conquer1.3.3conquestr1.0.7
contactdata1.0.0contfrac1.1-12
convey0.2.5cops1.3-1
copula1.1-2copulaData0.0-1
cordillera1.0-0coro1.0.3
corona0.3.0coronavirus0.4.1
corpcor1.6.10corpora0.6
corporaexplorer0.8.6corrgram1.14
corrplot0.92cosa2.1.0
costat2.4.1countrycode1.5.0
COVID193.0.3covid19.analytics2.1.3.1
covid19br0.1.6covid19dbcand0.1.1
covid19france0.1.0covid19italy0.3.1
covid19sf0.1.2covid19swiss0.1.0
covid19us0.1.9CovidMutations0.1.3
cowplot1.1.1CPBayes1.1.0
cpk1.3-1cplm0.7-11
cpp110.4.6crawl2.3.0
crayon1.5.2credentials2.0.1
credule0.1.4crfsuite0.4.1
CRM1.2.4crmPack1.0.3
crossdes1.1-2Crossover0.1-21
crosstalk1.2.0crs0.15-37
crseEventStudy1.2.2crsmeta0.3.0
crul1.4.0cSEM0.5.0
cshapes2.0csodata1.4.2
cstab0.2-2csv0.6.2
ctbi2.0.5ctmcmove1.2.9
ctmm1.1.0ctrdata1.15.1
CTT2.3.3CTTShiny0.1
ctv0.9-5cubature2.1.0
cubble0.3.0Cubist0.4.2.1
curl5.0.2cvar0.5
cvAUC1.1.4CVST0.2-3
CVXR1.0-11d3Network0.5.2.1
DAAG1.25.4dae3.2.19
daewr1.2-11dagitty0.3-1
DAKS2.1-3DALEX2.4.3
data.table1.14.8data.tree1.0.0
DatabaseConnector6.2.4DataExplorer0.8.2
datapasta3.1.0dataseries0.2.0
datawizard0.9.0date1.2-42
datetimeutils0.6-1dbarts0.9-23
DBI1.1.3DBItest1.7.3
dbmss2.8-2dbparser2.0.1
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dbx0.2.8DChaos0.1-7
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socialmixr0.2.0sodium1.2.1
sofa0.4.0solaR0.46
solrium1.2.0sorvi0.8.21
sourcetools0.1.7-1sp2.0-0
sp23design0.9-1spacetime1.3-0
spam2.9-1spaMM4.4.0
spant2.15.0sparklyr1.8.3
sparr2.3-10sparseDFM1.0
SparseFactorAnalysis1.0sparseinv0.1.3
SparseM1.81sparseMVN0.2.2
sparsevar0.1.0spatgraphs3.4
spatialCovariance0.6-9SpatialEpi1.2.8
SpatialExtremes2.1-0SpatialPosition2.1.2
spatialprobit1.0.1spatialreg1.2-9
spatialsample0.4.0SpatialTools1.0.5
spatialwidget0.2.3spatstat3.0-6
spatstat.data3.0-1spatstat.explore3.2-3
spatstat.geom3.2-5spatstat.linnet3.1-1
spatstat.model3.2-6spatstat.random3.1-6
spatstat.sparse3.0-2spatstat.utils3.0-3
spBayes0.4-6spBayesSurv1.1.7
Spbsampling1.3.5spd2.0-1
spData2.3.0spdep1.2-8
spec0.1.7spectral2.0
speff2trial1.0.5sperrorest3.0.5
sphet2.0spikeslab1.1.6
spikeSlabGAM1.1-19spINAR0.1.0
spind2.2.1splancs2.01-44
splines20.5.1splm1.6-3
spmodel0.4.0spmoran0.2.2.9
SpotSampling0.1.0spselect0.0.1
spsur1.0.2.5spsurvey5.5.0
spTimer3.3.2sptotal1.0.1
sqldf0.4-11SqlRender1.15.2
SQRL1.0.1SQUAREM2021.1
srvyr1.2.0ssanv1.1
SSBtools1.4.8ssgraph1.15
ssize.fdr1.3ssizeRNA1.3.2
ssMousetrack1.1.6SSN1.1.17
stabledist0.7-1stabs0.6-4
stampr0.3.0StanHeaders2.26.28
starma1.3stars0.6-4
STARTS1.3-8startupmsg0.9.6
statcanR0.2.6statcodelists0.9.2
statebins1.4.0statespacer0.5.0
StatMatch1.4.1statmod1.5.0
statnet.common4.9.0StatRank0.0.6
steadyICA1.0STFTS0.1.0
stinepack1.4stlplus0.5.1
stm1.3.6.1STMedianPolish0.2
stochvol3.2.1stockAnalyst1.0.1
stopwords2.3storr1.2.5
stR0.6strand0.2.0
stratification2.2-7stringdist0.9.10
stringfish0.15.8stringi1.7.12
stringr1.5.0strucchange1.5-3
strucchangeRcpp1.5-3-1.0.4StructuralDecompose0.1.1
styler1.10.2subplex1.8
subscore3.3sufficientForecasting0.1.0
sugrrants0.2.8SuperLearner2.0-28.1
superml0.5.6SuppDists1.1-9.7
support.CEs0.6-0survcomp1.50.0
surveillance1.21.1survey4.2-1
surveybootstrap0.0.3surveydata0.2.7
surveyoutliers0.1surveyplanning4.0
surveysd1.3.1survivalROC1.0.3.1
survPresmooth1.1-11svars1.3.11
svd0.5.4.1SVDNF0.1.8
svglite2.1.1svrep0.6.3
svs3.0.0svUnit1.0.6
swephR0.3.1swirl2.4.5
swirlify0.5.3sylly0.1-6
sym.arma1.0symengine0.2.2
symmoments1.2.1synthACS1.7.1
synthesis1.2.3synthpop1.8-0
sys3.4.2systemfit1.1-30
systemfonts1.0.4tables0.9.17
tabnet0.4.0TAM4.1-4
TAQMNGR2018.5-1targets1.3.0
tau0.0-24taxize0.9.100
tbrf0.1.5tcltk21.2-11
Tcomp1.0.1tdigest0.4.1
TeachingDemos2.12tempdisagg1.1.1
tensor1.5tensorA0.36.2
tensorflow2.13.0TensorPreAve1.1.0
tensorTS1.0.1TEQR6.0-0
tergm4.2.0terra1.7-46
tesseract5.1.0testcorr0.2.0
TestDataImputation2.3TestDesign1.5.1
tester0.1.7testit0.13
TestScorer1.7.2testthat3.1.10
TexExamRandomizer1.2.3texreg1.38.6
text2vec0.6.3textcat1.0-8
textir2.0-5textplot0.2.2
textrank0.3.1textreuse0.1.5
textshaping0.3.6textTinyR1.1.7
tfarima0.3.2tfautograph0.3.2
tfdatasets2.9.0tfio0.4.1
tfplot2021.6-1tframe2015.12-1.1
tfruns1.5.1tgp2.4-21
TH.data1.1-2theft0.5.3
thief0.3ThreeArmedTrials1.0-4
threeBrain1.0.1ThreeGroups0.21
threejs0.3.3ThreeWay1.1.3
thurstonianIRT0.12.3tibble3.2.1
tibbletime0.1.8tictoc1.2
Tides2.1tidyBdE0.3.4
tidycensus1.4.4tidygraph1.2.3
tidyLPA1.1.0tidymodels1.1.1
tidyquant1.0.7tidyqwi0.1.2
tidyr1.3.0tidyselect1.2.0
tidytext0.4.1tidytree0.4.5
tidyverse2.0.0tiff0.1-11
tigris2.0.3timechange0.2.0
timeDate4022.108timeSeries4031.107
timeseriesdb1.0.0-1.1.2timetk2.8.3
timsac1.3.8-2tinytex0.46
tis1.39tkrplot0.0-27
tm0.7-11tm.plugin.alceste1.1
tm.plugin.dc0.2-10tm.plugin.europresse1.4
tm.plugin.factiva1.8tm.plugin.lexisnexis1.4.1
tm.plugin.mail0.2-2tmap3.3-4
tmaptools3.1-1TMB1.9.6
tmvnsim1.0-2tmvtnorm1.5
tokenizers0.3.0tokenizers.bpe0.1.3
toOrdinal1.3-0.0topicdoc0.1.1
topicmodels0.2-14topicmodels.etm0.1.0
torch0.11.0torchaudio0.3.1.9000
torchdatasets0.3.0torchvision0.5.1
tpr0.3-3trackdem0.6
trackdf0.3.2trackeR1.5.2
trackeRapp1.2TrackReconstruction1.3
tractor.base3.3.5.1traipse0.3.0
trajectories0.2-7trajr1.5.0
TransPhylo1.4.5trapezoid2.0-2
tree1.0-43TreeBUGS1.5.0
treeio1.24.0treemap2.4-4
trend1.1.5trendeval0.1.0
trending0.1.0TrialSize1.4
triangle1.0triebeard0.4.1
trimcluster0.1-5trip1.10.0
tripack1.3-9.1tripEstimation0.0-46
TripleR1.5.4TruncatedNormal2.2.2
truncdist1.0-2truncnorm1.0-9
truncreg0.2-5trust0.1-8
TSA1.3.1TSANN0.1.0
tsbox0.4.1tsBSS1.0.0
TSclust1.3.1tscount1.4.3
tsdb1.1-0tsdecomp0.2
TSdeeplearning0.1.0tsdisagg20.1.0
TSdisaggregation2.0.0TSdist3.7.1
tsDyn11.0.4TSEntropies0.9
tseries0.10-54tseriesChaos0.1-13.1
tseriesEntropy0.7-2tseriesTARMA0.3-2
tsfeatures1.1.1tsfknn0.5.2
tsibble1.1.3tsibbledata0.4.1
tsibbletalk0.1.0tsintermittent1.10
tsiR0.4.3TSLSTM0.1.0
tsModel0.6-1tsoutliers0.6-8
TSP1.2-4tsPI1.0.4
TSrepr1.1.0tsrobprep0.3.2
tssim0.1.7TSstudio0.1.7
TSTutorial1.2.7tsutils0.9.3
tswge2.1.0TTR0.24.3
tune1.1.2turner0.1.7
tvm0.5.2tweedie2.3.5
tweenr2.0.2twosamples2.0.1
tzdb0.4.0ubiquity2.0.0
ucminf1.2.0UComp4.0.2
udpipe0.8.11ufRisk1.0.6
ugatsdb0.2.3uGMAR3.4.5
UnifiedDoseFinding0.1.10units0.8-4
univOutl0.4unrepx1.0-2
uptasticsearch0.4.0urca1.3-3
urlchecker1.0.1urltools1.7.3
uroot2.1-2usdata0.2.0
usethis2.2.2usmap0.6.2
usmapdata0.1.0utf81.2.3
uuid1.1-1uwot0.1.16
V84.3.3validate1.1.3
validatetools0.5.0vapour0.9.5
VAR.etp1.1VARDetect0.1.6
vardiag0.2-1vardpoor0.20.1
VaRES1.0.2vars1.5-9
VARshrink0.3.1varycoef0.3.4
VCA1.4.5vcd1.4-11
vcdExtra0.8-5vctrs0.6.3
vdg1.2.2VedicDateTime0.1.7
vegan2.6-4VennDiagram1.7.3
venneuler1.1-3VGAM1.1-8
VGAMdata1.1-8vglmer1.0.3
VIM6.2.2VineCopula2.5.0
viridis0.6.4viridisLite0.4.2
visNetwork2.1.2visualize4.4.0
volatilityTrader1.0.1vpc1.2.2
vroom1.6.3vrtest1.2
waiter0.2.5waldo0.5.1
warp0.2.0Watersheds1.1
WaveletComp1.1wavelets0.3-0.2
WaveSampling0.1.3waveslim1.8.4
wavethresh4.7.2wavScalogram1.1.2
wCorr1.9.8WDI2.7.8
webdriver1.0.6webshot0.5.5
WeightIt0.14.2weights1.0.4
WeMix4.0.0whisker0.4.1
whitebox2.3.1widgetframe0.3.1
WikidataQueryServiceR1.0.0WikidataR2.3.3
WikipediR1.5.0wikitaxa0.4.0
wildlifeDI0.5.0wINEQ1.2.0
withr2.5.0wk0.8.0
wktmo1.0.5wkutils0.1.3
wnl0.7.3wooldridge1.4-3
word2vec0.3.4wordcloud2.6
wordnet0.1-16workflows1.1.3
workflowsets1.0.1worrms0.4.3
wpp20171.2-3wpp20191.1-1
WrightMap1.3writexl1.4.2
wrswoR1.1.1x121.10.3
x13binary1.1.57-4XBRL0.99.19.1
xfun0.40xgboost1.7.5.1
xgxr1.1.2XLConnect1.0.7
xlsx0.6.5xlsxjars0.6.1
XML3.99-0.14xml21.3.5
xopen1.0.0xplain0.2.2
xpose0.4.17xpose.nlmixr20.4.0
xpose44.7.2xtable1.8-4
xts0.13.1XVector0.40.0
xxIRT2.1.2yaImpute1.0-33
yaml2.3.7yardstick1.2.0
yesno0.1.2yuima1.15.22
yulab.utils0.0.9zeallot0.1.0
zic0.9.1ZIM1.1.0
ZINARp0.1.0zip2.3.0
zipfR0.6-70zlibbioc1.46.0
zoo1.8-12ZRA0.2

RStudio Server

R: 4.3.1

rstudio-server: 2023.06.0+421

CUDA Version: 11.7

GPU Driver Version: 515.43.04

Release Notes

Applied patching, updated R packages, and added R packages used in finance, official statistics, and survey statistics.

This AMI provides thousands of R packages covering various domains such as data science, machine learning, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, and natural language processing.

R packages (2659)

packageversionpackageversion
abc2.2.1abc.data1.0
abcrf1.9abglasso0.1.1
abind1.4-5abtest1.0.1
accrualPlot1.0.7acebayes1.10
acepack1.4.1acp2.1
acs2.1.4ACSWR1.0
actuar3.3-2ada2.0-5
adagio0.8.5adaptivetau2.2-3
adaptMCMC1.4adaptr1.3.1
adaptsmoFMRI1.2adaptTest1.1
ade41.7-22ade4TkGUI0.3-1
adegenet2.1.10adegraphics1.0-18
adehabitatLT0.3.27adehabitatMA0.3.16
ADGofTest0.3adimpro0.9.5
admisc0.33AdMit2.1.9
AER1.2-10affy1.78.0
affyio1.70.0africamonitor0.2.3
agricolae1.3-6agricolaeplotr0.3.1
agridat1.21airports0.1.0
akima0.6-3.4alabama2022.4-1
AlgDesign1.2.1almanac1.0.0
alphavantager0.1.3ALTopt0.1.2
Amelia1.8.1AmericanCallOpt0.95
ammiBayes1.0-1AMR2.1.0
AnaCoDa0.1.4.4anacor1.1-4
anesrake0.80animation2.7
AnnotationDbi1.62.1anytime0.3.9
aod1.3.2aoos0.5.0
AovBay0.1.0ape5.7-1
APFr1.0.2aplot0.1.10
approximator1.2-7ARCensReg2.1
ArchaeoChron0.1ArchaeoPhases1.8
ArDec2.1-1ARDL0.2.3
ardl.nardl1.2.3arfima1.8-1
arm1.13-1aroma.apd0.7.0
arrangements1.1.9arrow12.0.1.1
ars0.6ascii2.4
asd2.2ash1.0-15
ashr2.2-54askpass1.1
aspect1.0-6ASSA2.0
assertthat0.2.1AssetCorr1.0.4
astsa2.0asymmetry2.0.4
ata1.1.1aTSA3.1.2
attempt0.3.1attention0.3.0
AUC0.3.2audio0.1-10
automap1.1-9autostsm3.1.0
av0.8.3aweek1.0.3
aws2.5-3awsMethods1.1-1
BACCO2.0-9BACCT1.0
backports1.4.1backtest0.3-4
baggr0.7.6bain0.2.8
BalancedSampling1.6.3BaM1.0.3
bama1.3.0bamdit3.4.0
bamlss1.2-1bang1.0.1
BANOVA1.2.1BART2.9.4
bartBMA1.0bartCause1.0-6
bartMachine1.3.4.1bartMachineJARs1.2.1
BAS1.6.4basad0.3.0
base642.0.1base64enc0.1-3
base64url1.4basicMCMCplots0.2.7
BaSkePro0.1.0BASS1.3.1
BatchExperiments1.4.3BatchJobs1.9
baycn1.2.0bayefdr0.2.1
bayes4psy1.2.11bayesAB1.1.3
bayesammi0.1.0bayesanova1.5
BayesARIMAX0.1.1BayesBinMix1.4.1
bayesbio1.0.0bayesboot0.2.2
BayesBP1.1bayesbr0.0.1.0
BayesCACE1.2.3BayesCombo1.0
BayesComm0.1-2bayescopulareg0.1.3
bayescount0.9.99-8BayesCR2.1
bayesCT0.99.3BayesCTDesign0.6.1
BayesDA2012.04-1bayesDccGarch3.0.4
bayesdfa1.2.0bayesdistreg0.1.0
bayesDP1.3.6BayesFactor0.9.12-4.4
BayesFM0.1.5bayesforecast1.0.1
bayesGAM0.0.2bayesGARCH2.1.10
BayesGOF5.2BayesGPfit1.1.0
BayesGWQS0.1.1bayesian0.0.9
bayesianETAS1.0.3Bayesiangammareg0.1.0
BayesianGLasso0.2.0BayesianLaterality0.1.1
BayesianNetwork0.3BayesianTools0.1.8
bayesImageS0.6-1BayesLCA1.9
bayesLife5.1-1bayeslincom1.3.0
BayesLN0.2.8BayesLogit2.1
bayesloglin1.0.1bayeslongitudinal0.1.0
bayesm3.1-5BayesMallows1.3.0
BayesMassBal1.1.0bayesmeta3.3
bayesmix0.7-6bayesnec2.1.0.3
bayesplot1.10.0bayesQR2.3
BayesSAE1.0-2bayestestR0.13.1
bayesTFR7.3-2BayesTools0.2.16
BayesTree0.3-1.4BayesVarSel2.2.5
BayesX0.3-2BAYSTAR0.2-10
BB2019.10-1BBmisc1.13
BCBCSF1.0-1BCC19970.1.1
BCE2.2.0Bchron4.7.6
bcp4.0.3bcrm0.5.4
BDgraph2.72bdsmatrix1.3-6
BE0.2.4beadarray2.50.0
BeadDataPackR1.52.0bearishTrader1.0.2
beepr1.3beeswarm0.4.0
BenfordTests1.2.0bentcableAR0.3.1
Bergm5.0.5Bessel0.6-0
BEST0.5.4BetaBit2.1
betafunctions1.8.1betareg3.1-4
betategarch3.3BETS0.4.9
bets.covid191.0.0beyondWhittle1.2.0
bezier1.1.2bfast1.6.1
BGLR1.1.0BGVAR2.5.2
BH1.81.0-1BHH22016.05.31
BiasedUrn2.0.10bibtex0.5.1
bidask1.0.0BIFIEsurvey3.4-15
biganalytics1.1.21bigD0.2.0
biglm0.9-2.1bigmemory4.6.1
bigmemory.sri0.1.6bigrquery1.4.2
bigsplines1.1-1bigtime0.2.2
BigVAR1.1.2bindr0.1.1
bindrcpp0.2.2binom1.1-1.1
binomSamSize0.1-5binr1.1.1
binseqtest1.0.3Biobase2.60.0
BiocGenerics0.46.0BiocManager1.30.21.1
BiocParallel1.34.1BiocVersion3.17.1
bioinactivation1.2.3biomformat1.28.0
bioOED0.2.1Biostrings2.68.0
birtr1.0.0bit4.0.5
bit644.0.5bitops1.0-7
biwavelet0.20.21bizdays1.0.13
bkmr0.2.2blaise1.3.9
blastula0.3.3blavaan0.4-8
BLModel1.0.2blob1.2.4
blocklength0.1.5blockrand1.5
blocksdesign4.9blockTools0.6.4
BLR1.6BMA3.18.17
bmgarch1.1.0bmixture1.7
BMS0.3.5BMTAR0.1.1
bnlearn4.8.3BNPTSclust2.0
BNSP2.2.3boa1.1.8-2
boilerpipeR1.3.2BOIN2.7.2
bold1.3.0Bolstad0.2-41
Bolstad21.0-29bondAnalyst1.0.1
bookdown0.34Boom0.9.11
BoomSpikeSlab1.2.5bootnet1.5.3
BootPR0.70bootstrap2019.6
bootUR1.0.2bpca1.3-4
bqtl1.0-34BradleyTerry21.1-2
brainR1.6.0breakfast2.3
brew1.0-8brglm0.7.2
brglm20.9bridgesampling1.1-2
brio1.1.3brms2.19.0
Brobdingnag1.2-9broman0.80
broom1.0.5bsamGP1.2.4
bslib0.5.0BsMD2023.707
bspec1.6bspmma0.1-2
bssm2.0.1BSSprep0.1
bsts0.9.9bsvars1.0.0
BTLLasso0.1-11BTM0.3.7
bullishTrader1.0.1bundesbank0.1-9
BurStFin1.3BurStMisc1.1
BVAR1.0.4bvartools0.2.2
ca0.71.1cabootcrs2.1.0
cachem1.0.8cacIRT1.4
CADFtest0.3-3caffsim0.2.2
Cairo1.6-0calculus1.0.1
CalibrateSSB1.3.0calibrator1.2-8
callr3.7.3cancensus0.5.5
candisc0.8-6CANSIM2R1.14.1
car3.1-2CARBayes5.3
CARBayesdata3.0CARBayesST3.3.1
carData3.0-5caret6.0-94
carfima2.0.2caTools1.18.2
catR3.17causact0.4.2
CausalImpact1.3.0CAvariants5.9
cbsodataR0.5.1cccp0.2-9
cdlTools0.15CDM8.2-6
cds1.0.3CellNOptR1.46.0
cellranger1.1.0censusapi0.8.0
ChainLadder0.2.18chandwich1.1.5
changepoint2.2.4changepoint.geo1.0.1
changepoint.np1.0.5checkLuhn1.1.0
checkmate2.2.0cherryblossom0.1.0
chk0.9.0choiceDes0.9-3
CholWishart1.1.2chron2.3-61
cifti0.4.5cinterpolate1.0.0
CircSpaceTime0.9.0CircStats0.2-6
circular0.4-95ciTools0.6.1
classInt0.4-9cli3.6.1
clime0.5.0clinDR2.3.5
clinfun1.1.3clinicalsignificance1.2.0
clinPK0.11.1clinsig1.2
clipr0.8.0clisymbols1.2.0
clock0.7.0clue0.3-64
clustDRM0.1-0clusterGeneration1.3.7
clusterPower0.7.0ClustVarLV2.1.1
clv0.3-2.3cmaes1.0-12
CMLS1.0-1cmm0.12
cmprsk2.2-11cmrutils1.3.1
cNORM3.0.3CNORode1.42.0
coalescentMCMC0.4-4coalitions0.6.24
coarseDataTools0.6-6cobalt4.5.1
coconots1.1.1cocor1.1-4
cocorresp0.4-3cocron1.0-1
coda0.19-4coin1.4-2
cointReg0.2.0collapse1.9.6
collapsibleTree0.1.7colorRamps2.3.1
colorspace2.1-0colourpicker1.2.0
combinat0.0-8CombinS1.1-1
CommonJavaJars1.0-6commonmark1.9.0
compare0.2-6CompQuadForm1.4.3
conditionz0.1.0conf.design2.0.0
config0.3.1conflicted1.2.0
conquestr1.0.7contactdata1.0.0
contfrac1.1-12convey0.2.5
cops1.3-1copula1.1-2
copulaData0.0-1cordillera1.0-0
coro1.0.3corona0.3.0
coronavirus0.4.1corpcor1.6.10
corpora0.5-1corporaexplorer0.8.6
corrgram1.14corrplot0.92
cosa2.1.0costat2.4
countrycode1.5.0COVID193.0.3
covid19.analytics2.1.3.1covid19br0.1.6
covid19dbcand0.1.1covid19france0.1.0
covid19italy0.3.1covid19sf0.1.2
covid19swiss0.1.0covid19us0.1.9
CovidMutations0.1.3cowplot1.1.1
CPBayes1.1.0cpk1.3-1
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swirl2.4.5swirlify0.5.3
sylly0.1-6sym.arma1.0
symengine0.2.2symmoments1.2.1
synthesis1.2.3synthpop1.8-0
sys3.4.2systemfit1.1-30
systemfonts1.0.4tables0.9.17
tabnet0.4.0TAM4.1-4
TAQMNGR2018.5-1targets1.2.0
tau0.0-24taxize0.9.100
tbrf0.1.5tcltk21.2-11
Tcomp1.0.1tdigest0.4.1
TeachingDemos2.12tempdisagg1.1
tensor1.5tensorA0.36.2
tensorflow2.11.0TensorPreAve1.1.0
tensorTS1.0.1TEQR6.0-0
tergm4.2.0terra1.7-39
tesseract5.1.0testcorr0.2.0
TestDataImputation2.3TestDesign1.5.1
tester0.1.7testit0.13
TestScorer1.7.2testthat3.1.10
TexExamRandomizer1.2.3texreg1.38.6
text2vec0.6.3textcat1.0-8
textir2.0-5textplot0.2.2
textrank0.3.1textreuse0.1.5
textshaping0.3.6textTinyR1.1.7
tfarima0.3.2tfautograph0.3.2
tfdatasets2.9.0tfio0.4.1
tfplot2021.6-1tframe2015.12-1.1
tfruns1.5.1tgp2.4-21
TH.data1.1-2theft0.5.1
thief0.3ThreeArmedTrials1.0-4
threeBrain1.0.1ThreeGroups0.21
threejs0.3.3ThreeWay1.1.3
thurstonianIRT0.12.1tibble3.2.1
tibbletime0.1.8tictoc1.2
Tides2.1tidyBdE0.3.4
tidycensus1.4.1tidygraph1.2.3
tidyLPA1.1.0tidymodels1.1.0
tidyquant1.0.7tidyqwi0.1.2
tidyr1.3.0tidyselect1.2.0
tidytext0.4.1tidytree0.4.4
tidyverse2.0.0tiff0.1-11
tigris2.0.3timechange0.2.0
timeDate4022.108timeSeries4030.106
timeseriesdb1.0.0-1.1.2timetk2.8.3
timsac1.3.8-2tinytex0.45
tis1.39tkrplot0.0-27
tm0.7-11tm.plugin.alceste1.1
tm.plugin.dc0.2-10tm.plugin.europresse1.4
tm.plugin.factiva1.8tm.plugin.lexisnexis1.4.1
tm.plugin.mail0.2-2tmap3.3-3
tmaptools3.1-1TMB1.9.5
tmvnsim1.0-2tmvtnorm1.5
tokenizers0.3.0tokenizers.bpe0.1.1
toOrdinal1.3-0.0topicdoc0.1.1
topicmodels0.2-14topicmodels.etm0.1.0
torch0.11.0torchaudio0.3.1.9000
torchdatasets0.3.0torchvision0.5.1
tpr0.3-3tractor.base3.3.5.1
TransPhylo1.4.5trapezoid2.0-2
tree1.0-43TreeBUGS1.5.0
treeio1.24.0treemap2.4-4
trend1.1.5trendeval0.1.0
trending0.1.0TrialSize1.4
triangle1.0triebeard0.4.1
trimcluster0.1-5tripack1.3-9.1
TripleR1.5.4TruncatedNormal2.2.2
truncdist1.0-2truncnorm1.0-9
truncreg0.2-5trust0.1-8
TSA1.3.1TSANN0.1.0
tsbox0.4.1tsBSS1.0.0
TSclust1.3.1tscount1.4.3
tsdb1.1-0tsdecomp0.2
TSdeeplearning0.1.0tsdisagg20.1.0
TSdisaggregation2.0.0TSdist3.7.1
tsDyn11.0.4TSEntropies0.9
tseries0.10-54tseriesChaos0.1-13.1
tseriesEntropy0.6-0tseriesTARMA0.3-2
tsfeatures1.1tsfknn0.5.1
tsibble1.1.3tsibbledata0.4.1
tsibbletalk0.1.0tsintermittent1.10
tsiR0.4.3TSLSTM0.1.0
tsModel0.6-1tsoutliers0.6-8
TSP1.2-4tsPI1.0.3
TSrepr1.1.0tsrobprep0.3.2
tssim0.1.7TSstudio0.1.6
TSTutorial1.2.6tsutils0.9.3
tswge2.1.0TTR0.24.3
tune1.1.1turner0.1.7
tvm0.5.1tweedie2.3.5
tweenr2.0.2tzdb0.4.0
ubiquity2.0.0ucminf1.2.0
UComp4.0.2udpipe0.8.11
ufRisk1.0.6ugatsdb0.2.3
uGMAR3.4.4UnifiedDoseFinding0.1.10
units0.8-2univOutl0.4
unrepx1.0-2uptasticsearch0.4.0
urca1.3-3urlchecker1.0.1
urltools1.7.3uroot2.1-2
usdata0.2.0usethis2.2.2
usmap0.6.2usmapdata0.1.0
utf81.2.3uuid1.1-0
uwot0.1.16V84.3.3
validate1.1.3validatetools0.5.0
VAR.etp1.0VARDetect0.1.6
vardpoor0.20.1VaRES1.0.2
vars1.5-9VARshrink0.3.1
VCA1.4.5vcd1.4-11
vcdExtra0.8-4vctrs0.6.3
vdg1.2.2VedicDateTime0.1.7
vegan2.6-4VennDiagram1.7.3
venneuler1.1-3VGAM1.1-8
VGAMdata1.1-8vglmer1.0.3
VIM6.2.2VineCopula2.5.0
viridis0.6.4viridisLite0.4.2
visNetwork2.1.2visualize4.4.0
volatilityTrader1.0.1vpc1.2.2
vroom1.6.3vrtest1.1
waiter0.2.5waldo0.5.1
warp0.2.0WaveletComp1.1
wavelets0.3-0.2waveslim1.8.4
wavethresh4.7.2wavScalogram1.1.2
wCorr1.9.6WDI2.7.8
webdriver1.0.6webshot0.5.5
WeightIt0.14.2weights1.0.4
WeMix4.0.0whisker0.4.1
widgetframe0.3.1WikidataQueryServiceR1.0.0
WikidataR2.3.3WikipediR1.5.0
wikitaxa0.4.0wINEQ1.2.0
withr2.5.0wk0.7.3
wktmo1.0.5wnl0.7.3
wooldridge1.4-3word2vec0.3.4
wordcloud2.6wordnet0.1-16
workflows1.1.3workflowsets1.0.1
worrms0.4.3wpp20171.2-3
wpp20191.1-1WrightMap1.3
writexl1.4.2wrswoR1.1.1
x121.10.3x13binary1.1.57-3
XBRL0.99.19.1xfun0.39
xgboost1.7.5.1xgxr1.1.2
XLConnect1.0.7xlsx0.6.5
xlsxjars0.6.1XML3.99-0.14
xml21.3.5xopen1.0.0
xplain0.2.2xpose0.4.17
xpose.nlmixr20.4.0xpose44.7.2
xtable1.8-4xts0.13.1
XVector0.40.0xxIRT2.1.2
yaImpute1.0-33yaml2.3.7
yardstick1.2.0yesno0.1.2
yuima1.15.22yulab.utils0.0.6
zeallot0.1.0zic0.9.1
ZIM1.1.0ZINARp0.1.0
zip2.3.0zipfR0.6-70
zlibbioc1.46.0zoo1.8-12
ZRA0.2

RStudio Server

R: 4.3.1

rstudio-server: 2023.06.0+421

CUDA Version: 11.7

GPU Driver Version: 515.43.04

Release Notes

Installed R packages used for interacting with databases.

This AMI provides thousands of R packages covering various domains such as data science, machine learning, databases, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, and natural language processing.

R packages (2349)

packageversionpackageversion
abc2.2.1abc.data1.0
abcrf1.9abglasso0.1.1
abind1.4-5abtest1.0.1
accrualPlot1.0.7acebayes1.10
acepack1.4.1acp2.1
ACSWR1.0actuar3.3-2
ada2.0-5adaptivetau2.2-3
adaptMCMC1.4adaptr1.3.1
adaptsmoFMRI1.2adaptTest1.1
ade41.7-22ade4TkGUI0.3-1
adegenet2.1.10adegraphics1.0-18
adehabitatLT0.3.27adehabitatMA0.3.16
ADGofTest0.3adimpro0.9.5
admisc0.32AdMit2.1.9
AER1.2-10affy1.78.0
affyio1.70.0africamonitor0.2.3
agricolae1.3-5agricolaeplotr0.2.2
agridat1.21airports0.1.0
akima0.6-3.4alabama2022.4-1
AlgDesign1.2.1almanac1.0.0
alphavantager0.1.3ALTopt0.1.2
Amelia1.8.1ammiBayes1.0-1
AMR2.0.0AnaCoDa0.1.4.4
anacor1.1-4animation2.7
AnnotationDbi1.62.1anytime0.3.9
aod1.3.2AovBay0.1.0
ape5.7-1APFr1.0.2
aplot0.1.10approximator1.2-7
ARCensReg2.1ArchaeoChron0.1
ArchaeoPhases1.8ArDec2.1-1
ARDL0.2.3ardl.nardl1.2.3
arfima1.8-1arm1.13-1
aroma.apd0.6.1arrangements1.1.9
ars0.6ascii2.4
asd2.2ash1.0-15
ashr2.2-54askpass1.1
aspect1.0-6ASSA2.0
assertthat0.2.1astsa2.0
asymmetry2.0.4ata1.1.1
aTSA3.1.2attention0.3.0
AUC0.3.2audio0.1-10
automap1.1-9autostsm3.1.0
av0.8.3aweek1.0.3
aws2.5-1awsMethods1.1-1
BACCO2.0-9BACCT1.0
backports1.4.1baggr0.7.6
bain0.2.8BaM1.0.3
bama1.3.0bamdit3.4.0
bamlss1.2-0bang1.0.1
BANOVA1.2.1BART2.9.4
bartBMA1.0bartCause1.0-6
bartMachine1.3.3.1bartMachineJARs1.2.1
BAS1.6.4basad0.3.0
base642.0.1base64enc0.1-3
base64url1.4basicMCMCplots0.2.7
BaSkePro0.1.0BASS1.2.2
BatchExperiments1.4.3BatchJobs1.9
baycn1.2.0bayefdr0.2.1
bayes4psy1.2.11bayesAB1.1.3
bayesammi0.1.0bayesanova1.5
BayesARIMAX0.1.1BayesBinMix1.4.1
bayesbio1.0.0bayesboot0.2.2
BayesBP1.1bayesbr0.0.1.0
BayesCACE1.2.3BayesCombo1.0
BayesComm0.1-2bayescopulareg0.1.3
bayescount0.9.99-8BayesCR2.1
bayesCT0.99.3BayesCTDesign0.6.1
BayesDA2012.04-1bayesDccGarch3.0.4
bayesdfa1.2.0bayesdistreg0.1.0
bayesDP1.3.6BayesFactor0.9.12-4.4
BayesFM0.1.5bayesforecast1.0.1
bayesGAM0.0.2bayesGARCH2.1.10
BayesGOF5.2BayesGPfit1.1.0
BayesGWQS0.1.1bayesian0.0.9
bayesianETAS1.0.3Bayesiangammareg0.1.0
BayesianGLasso0.2.0BayesianLaterality0.1.1
BayesianNetwork0.1.5BayesianTools0.1.8
bayesImageS0.6-1BayesLCA1.9
bayesLife5.1-1bayeslincom1.3.0
BayesLN0.2.8BayesLogit2.1
bayesloglin1.0.1bayeslongitudinal0.1.0
bayesm3.1-5BayesMallows1.3.0
BayesMassBal1.1.0bayesmeta3.2
bayesmix0.7-6bayesnec2.1.0.3
bayesplot1.10.0bayesQR2.3
bayestestR0.13.1bayesTFR7.3-2
BayesTools0.2.14BayesTree0.3-1.4
BayesVarSel2.2.5BayesX0.3-2
BAYSTAR0.2-10BB2019.10-1
BBmisc1.13BCBCSF1.0-1
BCE2.2.0Bchron4.7.6
bcp4.0.3bcrm0.5.4
BDgraph2.72bdsmatrix1.3-6
BE0.2.4beadarray2.50.0
BeadDataPackR1.52.0beepr1.3
beeswarm0.4.0bentcableAR0.3.1
Bergm5.0.5BEST0.5.4
BetaBit2.1betafunctions1.8.1
betareg3.1-4BETS0.4.9
bets.covid191.0.0beyondWhittle1.2.0
bezier1.1.2bfast1.6.1
BGLR1.1.0BGVAR2.5.2
BH1.81.0-1BHH22016.05.31
BiasedUrn2.0.10biganalytics1.1.21
bigD0.2.0biglm0.9-2.1
bigmemory4.6.1bigmemory.sri0.1.6
bigrquery1.4.2bigsplines1.1-1
bigtime0.2.1BigVAR1.1.2
bindr0.1.1bindrcpp0.2.2
binom1.1-1.1binomSamSize0.1-5
binr1.1.1binseqtest1.0.3
Biobase2.60.0BiocGenerics0.46.0
BiocManager1.30.21BiocParallel1.34.1
BiocVersion3.17.1bioinactivation1.2.3
biomformat1.28.0bioOED0.2.1
Biostrings2.68.0birtr1.0.0
bit4.0.5bit644.0.5
bitops1.0-7biwavelet0.20.21
bkmr0.2.2blastula0.3.3
blavaan0.4-8blob1.2.4
blocklength0.1.5blockrand1.5
blocksdesign4.9blockTools0.6.4
BLR1.6BMA3.18.17
bmixture1.7BMS0.3.5
BMTAR0.1.1bnlearn4.8.3
BNPTSclust2.0BNSP2.2.3
boa1.1.8-2boilerpipeR1.3.2
BOIN2.7.2bold1.3.0
Bolstad0.2-41Bolstad21.0-29
bookdown0.34Boom0.9.11
BoomSpikeSlab1.2.5bootnet1.5.3
BootPR0.70bootstrap2019.6
bootUR1.0.2bpca1.3-4
bqtl1.0-34BradleyTerry21.1-2
brainR1.6.0breakfast2.3
brew1.0-8brglm0.7.2
brglm20.9bridgesampling1.1-2
brio1.1.3brms2.19.0
Brobdingnag1.2-9broom1.0.5
bsamGP1.2.4bslib0.5.0
BsMD2020.4.30bspec1.6
bspmma0.1-2bssm2.0.1
BSSprep0.1bsts0.9.9
bsvars1.0.0BTLLasso0.1-11
BTM0.3.7bundesbank0.1-9
BVAR1.0.4bvartools0.2.2
ca0.71.1cabootcrs2.1.0
cachem1.0.8cacIRT1.4
CADFtest0.3-3caffsim0.2.2
Cairo1.6-0calculus1.0.1
calibrator1.2-8callr3.7.3
candisc0.8-6car3.1-2
CARBayes5.3CARBayesdata3.0
CARBayesST3.3.1carData3.0-5
caret6.0-94carfima2.0.2
caTools1.18.2catR3.17
causact0.4.2CausalImpact1.3.0
CAvariants5.8CDM8.2-6
cds1.0.3CellNOptR1.46.0
cellranger1.1.0chandwich1.1.5
changepoint2.2.4changepoint.geo1.0.1
changepoint.np1.0.5checkmate2.2.0
cherryblossom0.1.0chk0.9.0
choiceDes0.9-3CholWishart1.1.2
chron2.3-61cifti0.4.5
cinterpolate1.0.0CircSpaceTime0.9.0
CircStats0.2-6circular0.4-95
ciTools0.6.1classInt0.4-9
cli3.6.1clime0.5.0
clinDR2.3.5clinfun1.1.2
clinicalsignificance1.2.0clinPK0.11.1
clinsig1.2clipr0.8.0
clisymbols1.2.0clock0.7.0
clue0.3-64clustDRM0.1-0
clusterGeneration1.3.7clusterPower0.7.0
ClustVarLV2.1.1clv0.3-2.3
cmaes1.0-12CMLS1.0-1
cmprsk2.2-11cmrutils1.3.1
cNORM3.0.3CNORode1.42.0
coalescentMCMC0.4-4coalitions0.6.24
coarseDataTools0.6-6coconots1.1.1
cocor1.1-4cocorresp0.4-3
cocron1.0-1coda0.19-4
coin1.4-2cointReg0.2.0
collapse1.9.6collapsibleTree0.1.7
colorRamps2.3.1colorspace2.1-0
colourpicker1.2.0combinat0.0-8
CombinS1.1-1CommonJavaJars1.0-6
commonmark1.9.0compare0.2-6
CompQuadForm1.4.3conditionz0.1.0
conf.design2.0.0config0.3.1
conflicted1.2.0conquestr1.0.7
contactdata1.0.0contfrac1.1-12
cops1.3-1copula1.1-2
cordillera1.0-0coro1.0.3
corona0.3.0coronavirus0.4.1
corpcor1.6.10corpora0.5-1
corporaexplorer0.8.6corrgram1.14
corrplot0.92cosa2.1.0
costat2.4countrycode1.5.0
COVID193.0.3covid19.analytics2.1.3.1
covid19br0.1.5covid19dbcand0.1.1
covid19france0.1.0covid19italy0.3.1
covid19sf0.1.2covid19swiss0.1.0
covid19us0.1.9CovidMutations0.1.3
cowplot1.1.1CPBayes1.1.0
cpk1.3-1cpp110.4.3
crayon1.5.2credentials1.3.2
crfsuite0.4.1CRM1.2.4
crmPack1.0.3crossdes1.1-2
Crossover0.1-21crosstalk1.2.0
crs0.15-37crul1.4.0
cSEM0.5.0csv0.6.2
ctbi2.0.5ctrdata1.13.2
CTT2.3.3CTTShiny0.1
ctv0.9-5cubature2.1.0
Cubist0.4.2.1curl5.0.1
cvar0.5cvAUC1.1.4
CVST0.2-3CVXR1.0-11
d3Network0.5.2.1DAAG1.25.4
dae3.2.15daewr1.2-10
dagitty0.3-1DAKS2.1-3
DALEX2.4.3data.table1.14.8
data.tree1.0.0DatabaseConnector6.2.2
DataExplorer0.8.2datapasta3.1.0
dataseries0.2.0datawizard0.8.0
date1.2-42datetimeutils0.6-1
dbarts0.9-23DBI1.1.3
DBItest1.7.3dbparser2.0.1
dbplyr2.3.2dbscan1.1-11
dbx0.2.8DChaos0.1-7
dclone2.3-0dcov0.1.1
dCovTS1.3dcurver0.9.2
dde1.0.4deBInfer0.4.4
debugme1.1.0deldir1.0-9
deltaPlotR1.6dendextend1.17.1
densEstBayes1.0-2.2DEoptim2.2-8
DEoptimR1.0-14depmix0.9.16
depmixS41.5-0DepthProc2.1.5
Deriv4.1.3desc1.4.2
DescTools0.99.49designmatch0.4.1
desirability2.1deSolve1.35
desplot1.10devtools2.4.5
dexter1.2.2dextergui0.2.6
dexterMST0.9.3dfcomb3.1-1
dfcrm0.2-2.1dfidx0.0-5
DFIT1.1dfms0.2.1
dfmta1.7-3dfoptim2020.10-1
dfped1.1dfpk3.5.1
DHARMa0.4.6diagis0.2.2
diagram1.6.5DiagrammeR1.0.10
dials1.2.0DiceDesign1.9
DiceEval1.5.1DiceKriging1.6.0
DiceView2.1-0dichromat2.0-0.1
DICOMread0.0.0.3DIFboost0.3
diffobj0.3.5diffusion0.2.7
DIFlasso1.0-4difNLR1.4.2-1
DIFplus1.1difR5.1
DIFtree3.1.6digest0.6.31
DIMORA0.3.5dimRed0.2.6
dina2.0.0dipsaus0.2.7
diptest0.76-0Dire2.1.1
DIRECT1.0.1directlabels2021.1.13
dirichletprocess0.4.1disaggR1.0.5
discretization1.0-1.1DistatisR1.1.1
distcrete1.0.3distfree.cr1.5.1
distr2.9.2distrEx2.9.0
distributional0.3.2DistributionUtils0.6-0
distrom1.0.1distrTeach2.9.0
dittodb0.1.6divest0.10.3
dLagM1.1.8dlm1.1-6
dlnm2.4.7dmri.tracking0.1.0
doBy4.6.16doc2vec0.2.0
docopulae0.4.0DoE.base1.2-2
DoE.MIParray1.0DoE.wrapper0.11
doMC1.3.8doParallel1.0.17
doRNG1.8.6DoseFinding1.0-4
doSNOW1.0.20dotCall641.0-2
downlit0.4.2downloader0.4
dparser1.3.1-10dplyr1.1.2
dqrng0.3.0dr4pl2.0.0
DRR0.0.4dsa1.0.12
DSAIDE0.9.3dse2020.2-1
DSL0.1-7DT0.28
DTAT0.3-6dti1.5.1
dtplyr1.3.1DTSg1.1.1
dtt0.1-2dtts0.1.0
dtw1.23-1dtwclust5.5.12
duckdb0.8.1dygraphs1.1.1.6
dyn0.2-9.6dynamicTreeCut1.63-1
dynaTree1.2-15dynlm0.3-6
e10711.7-13earlyR0.0.5
earth5.3.2easypower1.0.1
eba1.10-0EbayesThresh1.4-12
ebdbNet1.2.7EBImage4.42.0
EBMAforecast1.0.3ecb0.4.2
Ecdat0.4-2Ecfun0.3-2
ecm6.3.0ecodist2.0.9
ECOSolveR0.5.5ecp3.1.4
edfReader1.2.1edgeR3.42.2
edina0.1.1edmdata1.2.0
edstan1.0.6eegkit1.0-4
eegkitdata1.1EFAutilities2.1.3
effects4.2-2EGAnet1.2.3
egg0.4.5egor1.23.3
eha2.10.3eigenmodel1.11
elastic1.2.0elasticnet1.3
ellipse0.4.5ellipsis0.3.2
elliptic1.4-0EMD1.5.9
emg1.0.9emmeans1.8.6
emulator1.2-21encode0.3.6
endtoend2.29EngrExpt0.1-8
enrichwith0.3.1ensembleBMA5.1.8
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psychonetrics0.11psychotools0.7-3
psychotree0.16-0psychTools2.3.6
psyphy0.2-3PTAk2.0.0
PTSR0.1.2ptw1.9-16
purrr1.0.1pwr1.3-0
PwrGSD2.3.6pwrRasch0.1-2
qap0.1-2Qardl0.1.1
qcv1.0qdap2.4.6
qdapDictionaries1.0.7qdapRegex0.7.5
qdapTools1.3.7qgam1.3.4
qgraph1.9.5qicharts20.7.2
qMRI1.2qpdf1.3.2
qpNCA1.1.6qs0.25.5
qtl1.60quadprog1.5-8
Quandl2.11.0quanteda3.3.1
quantmod0.4.23quantreg5.95
quantspec1.2-3questionr0.7.8
quickpsy0.1.5.1qvalue2.32.0
qvcalc1.0.3R.cache0.16.0
R.devices2.17.1R.filesets2.15.0
R.huge0.9.0R.matlab3.7.0
R.methodsS31.8.2R.oo1.25.0
R.rsp0.45.0R.utils2.12.2
R01.2-10r2d30.2.6
R2HTML2.3.3R2jags0.7-1
R2OpenBUGS3.2-3.2.1R2WinBUGS2.1-21
R4CouchDB0.7.5R62.5.1
radarchart0.3.1ragg1.2.5
rainbow3.7rAmCharts2.1.15
ramcmc0.1.2ramps0.6.18
randomForest4.7-1.1randomForestSRC3.2.2
randomizeR3.0.1randomLCA1.1-2
randtoolbox2.0.4ranger0.15.1
rankdist1.1.4RANN2.6.1
rapidjsonr1.2.0RApiSerialize0.1.2
rappdirs0.3.3rARPACK0.11-0
RaschSampler0.8-8raster3.6-20
rasterImage0.4.0ratelimitr0.4.1
raveio0.1.0ravetools0.1.1
Rbeast0.9.9rbenchmark1.0.0
RBGL1.76.0rbibutils2.2.13
rbmi1.2.3Rcatch220.2.1
rcdd1.5-2Rcgmin2022-4.30
rcmdcheck1.4.0Rcmdr2.8-0
RcmdrMisc2.7-2RcmdrPlugin.DoE0.12-4
RcmdrPlugin.temis0.7.10RColorBrewer1.1-3
Rcpp1.0.10RcppAnnoy0.0.20
RcppArmadillo0.12.4.1.0RcppCCTZ0.2.12
RcppDate0.0.3RcppDE0.1.7
RcppDist0.1.1RcppEigen0.3.3.9.3
RcppGSL0.3.13RcppParallel5.1.7
RcppProgress0.4.2RcppRedis0.2.3
RcppRoll0.3.0RcppThread2.1.3
RcppTN0.2-2RcppTOML0.2.2
RcppZiggurat0.1.6Rcsdp0.1.57.5
RCurl1.98-1.12rdbnomics0.6.4
Rdpack2.4Rdsdp1.0.5.2.1
re20.1.2reactable0.4.4
reactR0.4.4readabs0.4.13
readODS1.8.0readr2.1.4
readstata130.10.1readxl1.4.2
REBayes2.51recipes1.0.6
redux1.1.3registry0.5-1
regress1.3-21regsem1.9.5
regspec2.6regtools1.7.0
relations0.6-13relimp1.0-5
rematch1.0.1rematch22.1.2
remotes2.4.2rentrez1.2.3
renv0.17.3replicateBE1.1.3
reportr1.3.0reprex2.0.2
REQS0.8-13resampledata0.3.1
resde1.1reshape0.8.9
reshape21.4.4reticulate1.30
revdbayes1.5.1rex1.2.1
Rfast2.0.7Rfast20.1.4
rgen0.0.1RGENERATE1.3.7
rgenoud5.9-0.3rgeos0.6-3
rgl1.1.3Rglpk0.6-5
RgoogleMaps1.4.5.3RGraphics3.0-2
Rgraphviz2.44.0RGreenplum0.1.2
RH20.2.4rhandsontable0.3.8
rhdf52.44.0rhdf5filters1.12.1
Rhdf5lib1.22.0rhosa0.2.0
RhpcBLASctl0.23-42riingo0.3.1
ring1.0.4RInside0.2.18
rintrojs0.3.2rio0.5.29
Rirt0.0.2riskCommunicator1.0.1
ritis1.0.0rjags4-14
rJava1.0-6RJDBC0.2-10
RJDemetra0.2.3rje1.12.1
rjson0.2.21RJSONIO1.3-1.8
RKEA0.0-6RKEAjars5.0-4
rlang1.1.1rle0.9.2
rlecuyer0.3-7Rlgt0.1-4
Rlibeemd1.4.2rlist0.4.6.2
RMariaDB1.2.2rmarkdown2.22
RMAWGEN1.3.7rmeta3.0
Rmpfr0.9-2rms6.7-0
rmutil1.1.10RMySQL0.10.25
rncl0.8.7rngtools1.5.2
rngWELL0.10-9RNifti1.5.0
RNiftyReg2.7.1rnn1.9.0
robfilter4.1.3RobKF1.0.2
RoBMA3.0.1robustbase0.99-0
rockchalk1.8.157rocker0.3.1
ROCR1.0-11RODBC1.3-20
rodd0.2-1roll1.1.6
Rook1.2ROOPSD0.3.8
rootSolve1.8.2.3roptim0.1.6
rotl3.1.0roxygen27.2.3
rpact3.3.4rpanel1.1-5.2
rpart.plot3.1.1rpf1.0.11
RPMG2.2-3rpostgis1.4.4
RPostgres1.4.5RPostgreSQL0.7-5
RPPairwiseDesign1.0RPresto1.4.5
rprojroot2.0.3rrcov1.7-3
rredlist0.7.1rrum0.2.0
rsample1.1.1rsdmx0.6-2
RSEIS4.1-4rsem0.5.0
Rsfar0.0.1RSGHB1.2.2
rsm2.10.3Rsolnp1.16
rsparse0.5.1RSpectra0.16-1
RSQLite2.3.1Rssa1.0.5
rstan2.21.8rstanarm2.21.4
rstantools2.3.1rstatix0.7.2
rstiefel1.0.1rstudioapi0.14
rsurface1.1.0RSurveillance0.2.1
rTensor1.4.8rtf0.4-14.1
RTFA0.1.0rticles0.25
RTransferEntropy0.2.21rts1.1-8
Rtsne0.16Rttf2pt11.3.12
rucrdtw0.1.4rugarch1.4-9
ruimtehol0.3.1rules1.0.2
RUnit0.4.32runjags2.2.1-7
runner0.4.3runstats1.1.0
Runuran0.38rust1.4.0
Rvcg0.22.1rversions2.1.2
rvest1.0.3Rvmmin2018-4.17.1
Rwave2.6-5RWeka0.4-46
RWekajars3.9.3-2rxode22.0.13
rxode2et2.0.10rxode2ll2.0.11
rxode2parse2.0.16rxode2random2.0.11
s21.1.4S4Vectors0.38.1
samadb0.2.6samplesize0.2-4
sandwich3.0-2sarima0.9.1
sass0.4.6satellite1.0.4
sazedR2.0.2sbgcop0.980
scales1.2.1scatterplot3d0.3-44
scoringRules1.1.1scoringutils1.1.0
ScottKnott1.3-0scs3.2.4
sde2.0.18sealasso0.1-3
seas0.6-0season0.3.15
seasonal1.9.0seasonalview0.3
seastests0.15.4seer1.1.8
segmented1.6-4selectr0.4-2
sem3.1-15semds0.9-6
SemiPar1.0-4.2semPlot1.1.6
SEMsens1.5.5semTools0.5-6
semtree0.9.18sendmailR1.4-0
SensoMineR1.26sentencepiece0.2.3
separationplot1.4seqDesign1.2
seqinr4.2-30seriation1.4.2
servr0.27sessioninfo1.2.2
setartree0.1.0setRNG2022.4-1
sets1.0-24sf1.0-13
sFFLHD0.1.2sfheaders0.4.2
sfsmisc1.1-15sftime0.2-0
sgd1.1.1sgeostat1.0-27
shades1.4.0shape1.4.6
shapefiles0.7.2shapes1.2.7
shiny1.7.4shiny.semantic0.4.3
shinyAce0.4.2shinybrms1.8.0
shinyBS0.61.1shinycssloaders1.0.0
shinydashboard0.7.2shinydashboardPlus2.0.3
shinyFiles0.9.3ShinyItemAnalysis1.5.0
shinyjs2.1.0shinystan2.6.0
shinytest1.5.3shinythemes1.2.0
shinyWidgets0.7.6showimage1.0.0
sigmoid1.4.0signal0.7-7
Sim.DiffProc4.8simcdm0.1.1
SimComp3.3simex1.8
simglm0.8.9SimInf9.5.0
simrel2.1.0simsem0.5-16
sirt3.12-66sitmo2.0.2
SkewHyperbolic0.4-0skmeans0.2-15
skpr1.4.0slam0.1-50
SLBDD0.0.4sleekts1.0.2
Sleuth22.0-5Sleuth31.0-3
SLHD2.1-1slider0.3.0
sm2.2-5.7.1smacof2.1-5
smooth3.2.1smoother1.1
smoots1.1.3smovie1.1.4
SMPracticals1.4-3sn2.1.1
sna2.7-1snakecase0.11.0
snow0.4-4SnowballC0.7.1
snowfall1.84-6.2SOAs1.3
soc.ca0.8.0socialmixr0.2.0
sodium1.2.1sofa0.4.0
solrium1.2.0sourcetools0.1.7-1
sp1.6-1sp23design0.9-1
spacetime1.3-0spam2.9-1
spant2.12.0sparklyr1.8.1
sparseDFM1.0SparseFactorAnalysis1.0
SparseM1.81sparsevar0.1.0
SpatialEpi1.2.8SpatialExtremes2.1-0
spatialreg1.2-9spatstat3.0-6
spatstat.data3.0-1spatstat.explore3.2-1
spatstat.geom3.2-1spatstat.linnet3.1-1
spatstat.model3.2-4spatstat.random3.1-5
spatstat.sparse3.0-1spatstat.utils3.0-3
spBayes0.4-6spd2.0-1
spData2.2.2spdep1.2-8
spec0.1.7spectral2.0
speff2trial1.0.5spikeslab1.1.6
spikeSlabGAM1.1-19spINAR0.1.0
splancs2.01-43splines20.5.0
spTimer3.3.2sqldf0.4-11
SqlRender1.15.0SQRL1.0.1
SQUAREM2021.1srvyr1.2.0
ssanv1.1ssgraph1.15
ssize.fdr1.3ssizeRNA1.3.2
ssMousetrack1.1.6stabledist0.7-1
stabs0.6-4StanHeaders2.26.27
stars0.6-1STARTS1.3-8
startupmsg0.9.6statespacer0.5.0
statmod1.5.0statnet.common4.9.0
StatRank0.0.6steadyICA1.0
STFTS0.1.0stinepack1.4
stlplus0.5.1stm1.3.6
stochvol3.2.1stopwords2.3
storr1.2.5stR0.5
stringdist0.9.10stringfish0.15.8
stringi1.7.12stringr1.5.0
strucchange1.5-3strucchangeRcpp1.5-3-1.0.4
StructuralDecompose0.1.1styler1.10.1
subplex1.8subscore3.3
sufficientForecasting0.1.0sugrrants0.2.8
SuperLearner2.0-28superml0.5.6
SuppDists1.1-9.7support.CEs0.5-0
survcomp1.50.0surveillance1.21.1
survey4.2-1survivalROC1.0.3.1
survPresmooth1.1-11svars1.3.11
svd0.5.4svglite2.1.1
svs3.0.0svUnit1.0.6
swephR0.3.1swirl2.4.5
swirlify0.5.3sylly0.1-6
sym.arma1.0symengine0.2.2
symmoments1.2.1synthesis1.2.3
sys3.4.2systemfit1.1-30
systemfonts1.0.4tables0.9.17
tabnet0.4.0TAM4.1-4
targets1.1.3tau0.0-24
taxize0.9.100tbrf0.1.5
tcltk21.2-11Tcomp1.0.1
tdigest0.4.1TeachingDemos2.12
tempdisagg1.1tensor1.5
tensorA0.36.2tensorflow2.11.0
TensorPreAve1.1.0tensorTS1.0.1
TEQR6.0-0tergm4.2.0
terra1.7-37tesseract5.1.0
testcorr0.2.0TestDataImputation2.3
TestDesign1.5.1testit0.13
TestScorer1.7.2testthat3.1.9
TexExamRandomizer1.2.3texreg1.38.6
text2vec0.6.3textcat1.0-8
textir2.0-5textplot0.2.2
textrank0.3.1textreuse0.1.5
textshaping0.3.6textTinyR1.1.7
tfarima0.3.2tfautograph0.3.2
tfdatasets2.9.0tfio0.4.1
tfplot2021.6-1tframe2015.12-1.1
tfruns1.5.1tgp2.4-21
TH.data1.1-2theft0.4.2.4
thief0.3ThreeArmedTrials1.0-4
threeBrain1.0.0ThreeGroups0.21
threejs0.3.3ThreeWay1.1.3
thurstonianIRT0.12.1tibble3.2.1
tictoc1.2Tides2.1
tidygraph1.2.3tidyLPA1.1.0
tidymodels1.1.0tidyquant1.0.7
tidyr1.3.0tidyselect1.2.0
tidytext0.4.1tidytree0.4.2
tidyverse2.0.0tiff0.1-11
timechange0.2.0timeDate4022.108
timeSeries4030.106timeseriesdb1.0.0-1.1.2
timetk2.8.3timsac1.3.8
tinytex0.45tis1.39
tkrplot0.0-27tm0.7-11
tm.plugin.alceste1.1tm.plugin.dc0.2-10
tm.plugin.europresse1.4tm.plugin.factiva1.8
tm.plugin.lexisnexis1.4.1tm.plugin.mail0.2-2
TMB1.9.4tmvnsim1.0-2
tmvtnorm1.5tokenizers0.3.0
tokenizers.bpe0.1.1toOrdinal1.3-0.0
topicdoc0.1.1topicmodels0.2-14
topicmodels.etm0.1.0torch0.11.0
torchaudio0.3.1.9000torchdatasets0.3.0
torchvision0.5.1tpr0.3-3
tractor.base3.3.5.1TransPhylo1.4.5
trapezoid2.0-2tree1.0-43
TreeBUGS1.5.0treeio1.24.0
trend1.1.5trendeval0.1.0
trending0.1.0TrialSize1.4
triangle1.0triebeard0.4.1
trimcluster0.1-5tripack1.3-9.1
TripleR1.5.4TruncatedNormal2.2.2
truncdist1.0-2truncnorm1.0-9
truncreg0.2-5trust0.1-8
TSA1.3.1TSANN0.1.0
tsbox0.4.1tsBSS1.0.0
TSclust1.3.1tscount1.4.3
tsdb1.1-0tsdecomp0.2
TSdeeplearning0.1.0tsdisagg20.1.0
TSdisaggregation2.0.0TSdist3.7.1
tsDyn11.0.4TSEntropies0.9
tseries0.10-54tseriesChaos0.1-13.1
tseriesEntropy0.6-0tseriesTARMA0.3-2
tsfeatures1.1tsfknn0.5.1
tsibble1.1.3tsibbledata0.4.1
tsibbletalk0.1.0tsintermittent1.10
tsiR0.4.3TSLSTM0.1.0
tsModel0.6-1tsoutliers0.6-8
TSP1.2-4tsPI1.0.3
TSrepr1.1.0tsrobprep0.3.2
tssim0.1.7TSstudio0.1.6
TSTutorial1.2.6tsutils0.9.3
tswge2.1.0TTR0.24.3
tune1.1.1tweenr2.0.2
tzdb0.4.0ubiquity2.0.0
ucminf1.2.0UComp4.0.2
udpipe0.8.11ugatsdb0.2.3
uGMAR3.4.4UnifiedDoseFinding0.1.10
units0.8-2unrepx1.0-2
uptasticsearch0.4.0urca1.3-3
urlchecker1.0.1urltools1.7.3
uroot2.1-2usdata0.2.0
usethis2.2.0utf81.2.3
uuid1.1-0uwot0.1.14
V84.3.0VAR.etp1.0
VARDetect0.1.6vars1.5-9
VARshrink0.3.1VCA1.4.5
vcd1.4-11vcdExtra0.8-4
vctrs0.6.3vdg1.2.2
VedicDateTime0.1.4vegan2.6-4
VennDiagram1.7.3venneuler1.1-3
VGAM1.1-8VGAMdata1.1-8
vglmer1.0.3viridis0.6.3
viridisLite0.4.2visNetwork2.1.2
visualize4.4.0vpc1.2.2
vroom1.6.3waiter0.2.5
waldo0.5.1warp0.2.0
WaveletComp1.1wavelets0.3-0.2
waveslim1.8.4wavethresh4.7.2
wavScalogram1.1.2wCorr1.9.6
webdriver1.0.6webshot0.5.4
weights1.0.4whisker0.4.1
WikidataQueryServiceR1.0.0WikidataR2.3.3
WikipediR1.5.0wikitaxa0.4.0
withr2.5.0wk0.7.3
wktmo1.0.5wnl0.7.3
wooldridge1.4-3word2vec0.3.4
wordcloud2.6wordnet0.1-16
workflows1.1.3workflowsets1.0.1
worrms0.4.3wpp20171.2-3
wpp20191.1-1WrightMap1.3
writexl1.4.2x121.10.3
x13binary1.1.57-3xfun0.39
xgboost1.7.5.1xgxr1.1.2
XLConnect1.0.7xlsx0.6.5
xlsxjars0.6.1XML3.99-0.14
xml21.3.4xopen1.0.0
xplain0.2.2xpose0.4.16
xpose.nlmixr20.4.0xpose44.7.2
xtable1.8-4xts0.13.1
XVector0.40.0xxIRT2.1.2
yaImpute1.0-33yaml2.3.7
yardstick1.2.0yesno0.1.2
yuima1.15.22yulab.utils0.0.6
zeallot0.1.0zic0.9.1
ZIM1.1.0ZINARp0.1.0
zip2.3.0zipfR0.6-70
zlibbioc1.46.0zoo1.8-12
ZRA0.2

RStudio Server

R: 4.3.1

rstudio-server: 2023.06.0+421

CUDA Version: 11.7

GPU Driver Version: 515.43.04

Release Notes

Updated R from 4.3.0 to 4.3.1 and R packages to newer versions.

This AMI provides thousands of R packages covering various domains such as data science, machine learning, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, and natural language processing.

R packages (2295)

packageversionpackageversion
abc2.2.1abc.data1.0
abcrf1.9abglasso0.1.1
abind1.4-5abtest1.0.1
accrualPlot1.0.7acebayes1.10
acepack1.4.1acp2.1
ACSWR1.0actuar3.3-2
ada2.0-5adaptivetau2.2-3
adaptMCMC1.4adaptr1.3.1
adaptsmoFMRI1.2adaptTest1.1
ade41.7-22ade4TkGUI0.3-1
adegenet2.1.10adegraphics1.0-18
adehabitatLT0.3.27adehabitatMA0.3.16
ADGofTest0.3adimpro0.9.5
admisc0.32AdMit2.1.9
AER1.2-10affy1.78.0
affyio1.70.0africamonitor0.2.3
agricolae1.3-5agricolaeplotr0.2.2
agridat1.21airports0.1.0
akima0.6-3.4alabama2022.4-1
AlgDesign1.2.1almanac1.0.0
alphavantager0.1.3ALTopt0.1.2
Amelia1.8.1ammiBayes1.0-1
AMR2.0.0AnaCoDa0.1.4.4
anacor1.1-4animation2.7
AnnotationDbi1.62.1anytime0.3.9
aod1.3.2AovBay0.1.0
ape5.7-1APFr1.0.2
aplot0.1.10approximator1.2-7
ARCensReg2.1ArchaeoChron0.1
ArchaeoPhases1.8ArDec2.1-1
ARDL0.2.3ardl.nardl1.2.3
arfima1.8-1arm1.13-1
aroma.apd0.6.1arrangements1.1.9
ars0.6ascii2.4
asd2.2ash1.0-15
ashr2.2-54askpass1.1
aspect1.0-6ASSA2.0
assertthat0.2.1astsa2.0
asymmetry2.0.4ata1.1.1
aTSA3.1.2attention0.3.0
AUC0.3.2audio0.1-10
automap1.1-9autostsm3.1.0
av0.8.3aweek1.0.3
aws2.5-1awsMethods1.1-1
BACCO2.0-9BACCT1.0
backports1.4.1baggr0.7.6
bain0.2.8BaM1.0.3
bama1.3.0bamdit3.4.0
bamlss1.2-0bang1.0.1
BANOVA1.2.1BART2.9.4
bartBMA1.0bartCause1.0-6
bartMachine1.3.3.1bartMachineJARs1.2.1
BAS1.6.4basad0.3.0
base642.0.1base64enc0.1-3
base64url1.4basicMCMCplots0.2.7
BaSkePro0.1.0BASS1.2.2
BatchExperiments1.4.3BatchJobs1.9
baycn1.2.0bayefdr0.2.1
bayes4psy1.2.11bayesAB1.1.3
bayesammi0.1.0bayesanova1.5
BayesARIMAX0.1.1BayesBinMix1.4.1
bayesbio1.0.0bayesboot0.2.2
BayesBP1.1bayesbr0.0.1.0
BayesCACE1.2.3BayesCombo1.0
BayesComm0.1-2bayescopulareg0.1.3
bayescount0.9.99-8BayesCR2.1
bayesCT0.99.3BayesCTDesign0.6.1
BayesDA2012.04-1bayesDccGarch3.0.4
bayesdfa1.2.0bayesdistreg0.1.0
bayesDP1.3.6BayesFactor0.9.12-4.4
BayesFM0.1.5bayesforecast1.0.1
bayesGAM0.0.2bayesGARCH2.1.10
BayesGOF5.2BayesGPfit1.1.0
BayesGWQS0.1.1bayesian0.0.9
bayesianETAS1.0.3Bayesiangammareg0.1.0
BayesianGLasso0.2.0BayesianLaterality0.1.1
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bayesImageS0.6-1BayesLCA1.9
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texreg1.38.6text2vec0.6.3
textcat1.0-8textir2.0-5
textplot0.2.2textrank0.3.1
textreuse0.1.5textshaping0.3.6
textTinyR1.1.7tfarima0.3.2
tfautograph0.3.2tfplot2021.6-1
tframe2015.12-1.1tfruns1.5.1
tgp2.4-21TH.data1.1-2
theft0.4.2.4thief0.3
ThreeArmedTrials1.0-4threeBrain1.0.0
ThreeGroups0.21threejs0.3.3
ThreeWay1.1.3thurstonianIRT0.12.1
tibble3.2.1tictoc1.2
Tides2.1tidygraph1.2.3
tidyLPA1.1.0tidymodels1.1.0
tidyquant1.0.7tidyr1.3.0
tidyselect1.2.0tidytext0.4.1
tidytree0.4.2tidyverse2.0.0
tiff0.1-11timechange0.2.0
timeDate4022.108timeSeries4030.106
timeseriesdb1.0.0-1.1.2timetk2.8.3
timsac1.3.8tinytex0.45
tis1.39tkrplot0.0-27
tm0.7-11tm.plugin.alceste1.1
tm.plugin.dc0.2-10tm.plugin.europresse1.4
tm.plugin.factiva1.8tm.plugin.lexisnexis1.4.1
tm.plugin.mail0.2-2TMB1.9.4
tmvnsim1.0-2tmvtnorm1.5
tokenizers0.3.0tokenizers.bpe0.1.1
toOrdinal1.3-0.0topicdoc0.1.1
topicmodels0.2-14topicmodels.etm0.1.0
torch0.11.0torchaudio0.3.1.9000
torchdatasets0.3.0torchvision0.5.1
tpr0.3-3tractor.base3.3.5.1
TransPhylo1.4.5trapezoid2.0-2
tree1.0-43TreeBUGS1.5.0
treeio1.24.0trend1.1.5
trendeval0.1.0trending0.1.0
TrialSize1.4triangle1.0
triebeard0.4.1trimcluster0.1-5
tripack1.3-9.1TripleR1.5.4
TruncatedNormal2.2.2truncdist1.0-2
truncnorm1.0-9truncreg0.2-5
trust0.1-8TSA1.3.1
TSANN0.1.0tsbox0.4.1
tsBSS1.0.0TSclust1.3.1
tscount1.4.3tsdb1.1-0
tsdecomp0.2TSdeeplearning0.1.0
tsdisagg20.1.0TSdisaggregation2.0.0
TSdist3.7.1tsDyn11.0.4
TSEntropies0.9tseries0.10-54
tseriesChaos0.1-13.1tseriesEntropy0.6-0
tseriesTARMA0.3-2tsfeatures1.1
tsfknn0.5.1tsibble1.1.3
tsibbledata0.4.1tsibbletalk0.1.0
tsintermittent1.10tsiR0.4.3
TSLSTM0.1.0tsModel0.6-1
tsoutliers0.6-8TSP1.2-4
tsPI1.0.3TSrepr1.1.0
tsrobprep0.3.2tssim0.1.7
TSstudio0.1.6TSTutorial1.2.6
tsutils0.9.3tswge2.1.0
TTR0.24.3tune1.1.1
tweenr2.0.2tzdb0.4.0
ubiquity2.0.0ucminf1.2.0
UComp4.0.2udpipe0.8.11
ugatsdb0.2.3uGMAR3.4.4
UnifiedDoseFinding0.1.10units0.8-2
unrepx1.0-2urca1.3-3
urlchecker1.0.1urltools1.7.3
uroot2.1-2usdata0.2.0
usethis2.2.0utf81.2.3
uuid1.1-0uwot0.1.14
V84.3.0VAR.etp1.0
VARDetect0.1.6vars1.5-9
VARshrink0.3.1VCA1.4.5
vcd1.4-11vcdExtra0.8-4
vctrs0.6.3vdg1.2.2
VedicDateTime0.1.4vegan2.6-4
VennDiagram1.7.3venneuler1.1-3
VGAM1.1-8VGAMdata1.1-8
vglmer1.0.3viridis0.6.3
viridisLite0.4.2visNetwork2.1.2
visualize4.4.0vpc1.2.2
vroom1.6.3waiter0.2.5
waldo0.5.1warp0.2.0
WaveletComp1.1wavelets0.3-0.2
waveslim1.8.4wavethresh4.7.2
wavScalogram1.1.2wCorr1.9.6
webdriver1.0.6webshot0.5.4
weights1.0.4whisker0.4.1
WikidataQueryServiceR1.0.0WikidataR2.3.3
WikipediR1.5.0wikitaxa0.4.0
withr2.5.0wk0.7.3
wktmo1.0.5wnl0.7.3
wooldridge1.4-3word2vec0.3.4
wordcloud2.6wordnet0.1-16
workflows1.1.3workflowsets1.0.1
worrms0.4.3wpp20171.2-3
wpp20191.1-1WrightMap1.3
writexl1.4.2x121.10.3
x13binary1.1.57-3xfun0.39
xgboost1.7.5.1xgxr1.1.2
XLConnect1.0.7xlsx0.6.5
xlsxjars0.6.1XML3.99-0.14
xml21.3.4xopen1.0.0
xplain0.2.2xpose0.4.16
xpose.nlmixr20.4.0xpose44.7.2
xtable1.8-4xts0.13.1
XVector0.40.0xxIRT2.1.2
yaImpute1.0-33yaml2.3.7
yardstick1.2.0yesno0.1.2
yuima1.15.22yulab.utils0.0.6
zeallot0.1.0zic0.9.1
ZIM1.1.0ZINARp0.1.0
zip2.3.0zipfR0.6-70
zlibbioc1.46.0zoo1.8-12
ZRA0.2

RStudio Server

R: 4.3.0

rstudio-server: 2023.06.0+421

CUDA Version: 11.7

GPU Driver Version: 515.43.04

Release Notes

Set cairo as the default graphics backend; Installed flexdashboard and rticles to provide versatile R Markdown templates; Updated rstudio-server to 2023.06.0+421

This AMI provides thousands of R packages covering various domains such as data science, machine learning, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, and natural language processing.

R packages (2291)

packageversionpackageversion
abc2.2.1abc.data1.0
abcrf1.9abglasso0.1.1
abind1.4-5abtest1.0.1
accrualPlot1.0.7acebayes1.10
acepack1.4.1acp2.1
ACSWR1.0actuar3.3-2
ada2.0-5adaptivetau2.2-3
adaptMCMC1.4adaptr1.3.1
adaptsmoFMRI1.2adaptTest1.1
ade41.7-22ade4TkGUI0.3-1
adegenet2.1.10adegraphics1.0-18
adehabitatLT0.3.27adehabitatMA0.3.16
ADGofTest0.3adimpro0.9.5
admisc0.31AdMit2.1.9
AER1.2-10affy1.78.0
affyio1.70.0africamonitor0.2.3
agricolae1.3-5agricolaeplotr0.2.2
agridat1.21airports0.1.0
akima0.6-3.4alabama2022.4-1
AlgDesign1.2.1almanac1.0.0
alphavantager0.1.3ALTopt0.1.2
Amelia1.8.1ammiBayes1.0-1
AMR2.0.0AnaCoDa0.1.4.4
anacor1.1-4animation2.7
AnnotationDbi1.62.1anytime0.3.9
aod1.3.2AovBay0.1.0
ape5.7-1APFr1.0.2
aplot0.1.10approximator1.2-7
ARCensReg2.1ArchaeoChron0.1
ArchaeoPhases1.8ArDec2.1-1
ARDL0.2.3ardl.nardl1.2.3
arfima1.8-1arm1.13-1
aroma.apd0.6.1arrangements1.1.9
ars0.6ascii2.4
asd2.2ash1.0-15
ashr2.2-54askpass1.1
aspect1.0-6ASSA2.0
assertthat0.2.1astsa2.0
asymmetry2.0.4ata1.1.1
aTSA3.1.2attention0.3.0
AUC0.3.2audio0.1-10
automap1.1-9autostsm3.1.0
av0.8.3aweek1.0.3
aws2.5-1awsMethods1.1-1
BACCO2.0-9BACCT1.0
backports1.4.1baggr0.7.6
bain0.2.8BaM1.0.3
bama1.3.0bamdit3.4.0
bamlss1.1-9bang1.0.1
BANOVA1.2.1BART2.9.4
bartBMA1.0bartCause1.0-6
bartMachine1.3.3.1bartMachineJARs1.2.1
BAS1.6.4basad0.3.0
base642.0.1base64enc0.1-3
base64url1.4basicMCMCplots0.2.7
BaSkePro0.1.0BASS1.2.2
BatchExperiments1.4.3BatchJobs1.9
baycn1.2.0bayefdr0.2.1
bayes4psy1.2.11bayesAB1.1.3
bayesammi0.1.0bayesanova1.5
BayesARIMAX0.1.1BayesBinMix1.4.1
bayesbio1.0.0bayesboot0.2.2
BayesBP1.1bayesbr0.0.1.0
BayesCACE1.2.3BayesCombo1.0
BayesComm0.1-2bayescopulareg0.1.3
bayescount0.9.99-8BayesCR2.1
bayesCT0.99.3BayesCTDesign0.6.1
BayesDA2012.04-1bayesDccGarch3.0.4
bayesdfa1.2.0bayesdistreg0.1.0
bayesDP1.3.6BayesFactor0.9.12-4.4
BayesFM0.1.5bayesforecast1.0.1
bayesGAM0.0.2bayesGARCH2.1.10
BayesGOF5.2BayesGPfit1.1.0
BayesGWQS0.1.1bayesian0.0.9
bayesianETAS1.0.3Bayesiangammareg0.1.0
BayesianGLasso0.2.0BayesianLaterality0.1.1
BayesianNetwork0.1.5BayesianTools0.1.8
bayesImageS0.6-1BayesLCA1.9
bayesLife5.1-1bayeslincom1.3.0
BayesLN0.2.8BayesLogit2.1
bayesloglin1.0.1bayeslongitudinal0.1.0
bayesm3.1-5BayesMallows1.3.0
BayesMassBal1.1.0bayesmeta3.2
bayesmix0.7-6bayesnec2.1.0.3
bayesplot1.10.0bayesQR2.3
bayestestR0.13.1bayesTFR7.3-2
BayesTools0.2.13BayesTree0.3-1.4
BayesVarSel2.2.5BayesX0.3-1.1
BAYSTAR0.2-10BB2019.10-1
BBmisc1.13BCBCSF1.0-1
BCE2.2.0Bchron4.7.6
bcp4.0.3bcrm0.5.4
BDgraph2.72bdsmatrix1.3-6
BE0.2.4beadarray2.50.0
BeadDataPackR1.52.0beepr1.3
beeswarm0.4.0bentcableAR0.3.1
Bergm5.0.5BEST0.5.4
BetaBit2.1betafunctions1.8.1
betareg3.1-4BETS0.4.9
bets.covid191.0.0beyondWhittle1.1.3
bezier1.1.2bfast1.6.1
BGLR1.1.0BGVAR2.5.2
BH1.81.0-1BHH22016.05.31
BiasedUrn2.0.9biganalytics1.1.21
bigD0.2.0biglm0.9-2.1
bigmemory4.6.1bigmemory.sri0.1.6
bigsplines1.1-1bigtime0.2.1
BigVAR1.1.2bindr0.1.1
bindrcpp0.2.2binom1.1-1.1
binomSamSize0.1-5binr1.1.1
binseqtest1.0.3Biobase2.60.0
BiocGenerics0.46.0BiocManager1.30.20
BiocParallel1.34.1BiocVersion3.17.1
bioinactivation1.2.3biomformat1.28.0
bioOED0.2.1Biostrings2.68.0
birtr1.0.0bit4.0.5
bit644.0.5bitops1.0-7
biwavelet0.20.21bkmr0.2.2
blavaan0.4-7blob1.2.4
blocklength0.1.5blockrand1.5
blocksdesign4.9blockTools0.6.4
BLR1.6BMA3.18.17
bmixture1.7BMS0.3.5
BMTAR0.1.1bnlearn4.8.3
BNPTSclust2.0BNSP2.2.2
boa1.1.8-2boilerpipeR1.3.2
BOIN2.7.2bold1.3.0
Bolstad0.2-41Bolstad21.0-29
bookdown0.34Boom0.9.11
BoomSpikeSlab1.2.5bootnet1.5.1
BootPR0.70bootstrap2019.6
bootUR1.0.2bpca1.3-4
bqtl1.0-34BradleyTerry21.1-2
brainR1.6.0breakfast2.3
brew1.0-8brglm0.7.2
brglm20.9bridgesampling1.1-2
brio1.1.3brms2.19.0
Brobdingnag1.2-9broom1.0.4
bsamGP1.2.4bslib0.4.2
BsMD2020.4.30bspec1.6
bspmma0.1-2bssm2.0.1
BSSprep0.1bsts0.9.9
bsvars1.0.0BTLLasso0.1-11
BTM0.3.7bundesbank0.1-9
BVAR1.0.4bvartools0.2.1
ca0.71.1cabootcrs2.1.0
cachem1.0.8cacIRT1.4
CADFtest0.3-3caffsim0.2.2
Cairo1.6-0calculus1.0.1
calibrator1.2-8callr3.7.3
candisc0.8-6car3.1-2
CARBayes5.3CARBayesdata3.0
CARBayesST3.3.1carData3.0-5
caret6.0-94carfima2.0.2
caTools1.18.2catR3.17
causact0.4.2CausalImpact1.3.0
CAvariants5.8CDM8.2-6
cds1.0.3CellNOptR1.46.0
cellranger1.1.0chandwich1.1.5
changepoint2.2.4changepoint.geo1.0.1
changepoint.np1.0.5checkmate2.2.0
cherryblossom0.1.0chk0.8.1
choiceDes0.9-3CholWishart1.1.2
chron2.3-61cifti0.4.5
cinterpolate1.0.0CircSpaceTime0.9.0
CircStats0.2-6circular0.4-95
ciTools0.6.1classInt0.4-9
cli3.6.1clime0.5.0
clinDR2.3.5clinfun1.1.1
clinicalsignificance1.2.0clinPK0.11.1
clinsig1.2clipr0.8.0
clisymbols1.2.0clock0.7.0
clue0.3-64clustDRM0.1-0
clusterGeneration1.3.7clusterPower0.7.0
ClustVarLV2.1.1clv0.3-2.3
cmaes1.0-12CMLS1.0-1
cmprsk2.2-11cmrutils1.3.1
cNORM3.0.3CNORode1.42.0
coalescentMCMC0.4-4coalitions0.6.24
coarseDataTools0.6-6coconots1.1.1
cocor1.1-4cocorresp0.4-3
cocron1.0-1coda0.19-4
coin1.4-2cointReg0.2.0
collapse1.9.5collapsibleTree0.1.7
colorRamps2.3.1colorspace2.1-0
colourpicker1.2.0combinat0.0-8
CombinS1.1-1CommonJavaJars1.0-6
commonmark1.9.0compare0.2-6
CompQuadForm1.4.3conditionz0.1.0
conf.design2.0.0config0.3.1
conflicted1.2.0conquestr1.0.7
contactdata1.0.0contfrac1.1-12
cops1.3-1copula1.1-2
cordillera1.0-0coro1.0.3
corona0.3.0coronavirus0.4.1
corpcor1.6.10corpora0.5-1
corporaexplorer0.8.6corrgram1.14
corrplot0.92cosa2.1.0
costat2.4countrycode1.4.0
COVID193.0.3covid19.analytics2.1.3
covid19br0.1.5covid19dbcand0.1.1
covid19france0.1.0covid19italy0.3.1
covid19sf0.1.2covid19swiss0.1.0
covid19us0.1.9CovidMutations0.1.3
cowplot1.1.1CPBayes1.1.0
cpk1.3-1cpp110.4.3
crayon1.5.2credentials1.3.2
crfsuite0.4.1CRM1.2.4
crmPack1.0.3crossdes1.1-2
Crossover0.1-21crosstalk1.2.0
crs0.15-37crul1.3
cSEM0.5.0csv0.6.2
ctbi2.0.5ctrdata1.13.1
CTT2.3.3CTTShiny0.1
ctv0.9-4cubature2.0.4.6
Cubist0.4.2.1curl5.0.0
cvar0.5cvAUC1.1.4
CVST0.2-3CVXR1.0-11
d3Network0.5.2.1DAAG1.25.4
dae3.2.15daewr1.2-10
dagitty0.3-1DAKS2.1-3
DALEX2.4.3data.table1.14.8
data.tree1.0.0DataExplorer0.8.2
datapasta3.1.0dataseries0.2.0
datawizard0.7.1date1.2-42
datetimeutils0.6-1dbarts0.9-23
DBI1.1.3dbparser2.0.1
dbplyr2.3.2dbscan1.1-11
DChaos0.1-7dclone2.3-0
dcov0.1.1dCovTS1.3
dcurver0.9.2dde1.0.4
deBInfer0.4.4debugme1.1.0
deldir1.0-6deltaPlotR1.6
dendextend1.17.1densEstBayes1.0-2.2
DEoptim2.2-8DEoptimR1.0-13
depmix0.9.16depmixS41.5-0
DepthProc2.1.5Deriv4.1.3
desc1.4.2DescTools0.99.49
designmatch0.4.1desirability2.1
deSolve1.35desplot1.10
devtools2.4.5dexter1.2.2
dextergui0.2.6dexterMST0.9.3
dfcomb3.1-1dfcrm0.2-2.1
dfidx0.0-5DFIT1.1
dfms0.2.1dfmta1.7-3
dfoptim2020.10-1dfped1.1
dfpk3.5.1DHARMa0.4.6
diagis0.2.2diagram1.6.5
DiagrammeR1.0.9dials1.2.0
DiceDesign1.9DiceEval1.5.1
DiceKriging1.6.0DiceView2.1-0
dichromat2.0-0.1DICOMread0.0.0.3
DIFboost0.3diffobj0.3.5
diffusion0.2.7DIFlasso1.0-4
difNLR1.4.2-1DIFplus1.1
difR5.1DIFtree3.1.6
digest0.6.31DIMORA0.3.4
dimRed0.2.6dina2.0.0
dipsaus0.2.6diptest0.76-0
Dire2.1.1DIRECT1.0.1
directlabels2021.1.13dirichletprocess0.4.1
disaggR1.0.5discretization1.0-1.1
DistatisR1.1.1distcrete1.0.3
distfree.cr1.5.1distr2.9.2
distrEx2.9.0distributional0.3.2
DistributionUtils0.6-0distrom1.0.1
distrTeach2.9.0divest0.10.3
dLagM1.1.8dlm1.1-6
dlnm2.4.7dmri.tracking0.1.0
doBy4.6.16doc2vec0.2.0
docopulae0.4.0DoE.base1.2-2
DoE.MIParray1.0DoE.wrapper0.11
doMC1.3.8doParallel1.0.17
doRNG1.8.6DoseFinding1.0-4
doSNOW1.0.20dotCall641.0-2
downlit0.4.2downloader0.4
dparser1.3.1-10dplyr1.1.2
dqrng0.3.0dr4pl2.0.0
DRR0.0.4dsa1.0.12
DSAIDE0.9.3dse2020.2-1
DSL0.1-7DT0.27
DTAT0.3-6dti1.5.1
dtplyr1.3.1DTSg1.1.1
dtt0.1-2dtts0.1.0
dtw1.23-1dtwclust5.5.12
dygraphs1.1.1.6dyn0.2-9.6
dynamicTreeCut1.63-1dynaTree1.2-15
dynlm0.3-6e10711.7-13
earlyR0.0.5earth5.3.2
easypower1.0.1eba1.10-0
EbayesThresh1.4-12ebdbNet1.2.7
EBImage4.42.0EBMAforecast1.0.3
ecb0.4.2Ecdat0.4-2
Ecfun0.3-2ecm6.3.0
ecodist2.0.9ECOSolveR0.5.5
ecp3.1.4edfReader1.2.1
edgeR3.42.2edina0.1.1
edmdata1.2.0edstan1.0.6
eegkit1.0-4eegkitdata1.1
EFAutilities2.1.2effects4.2-2
EGAnet1.2.3egg0.4.5
egor1.23.3eha2.10.3
eigenmodel1.11elasticnet1.3
ellipse0.4.5ellipsis0.3.2
elliptic1.4-0EMD1.5.9
emg1.0.9emmeans1.8.6
emulator1.2-21encode0.3.6
endtoend2.29EngrExpt0.1-8
enrichwith0.3.1ensembleBMA5.1.8
EntropyMCMC1.0.4EnvStats2.7.0
Epi2.47.1epibasix1.5
epicontacts1.1.3EpiContactTrace0.17.0
EpiCurve2.4-2epiDisplay3.5.0.2
EpiEstim2.2-4epiflows0.2.1
EpiILM1.5.2EpiILMCT1.1.7
epimdr0.6-5EpiModel2.3.2
epinet2.1.8epiR2.0.61
EpiReport1.0.2episensr1.2.0
epitools0.5-10.1epitrix0.4.0
equate2.0.8equateIRT2.3.0
equateMultiple0.1.1equivalence0.7.2
era0.4.1ergm4.4.0
ergm.ego1.0.1eRm1.0-2
errum0.0.3esaBcv1.2.1.1
esemifar1.0.1EstCRM1.6
estimability1.4.1EstimateGroupNetwork0.3.1
ETLUtils1.5etm1.1.1
etrunct0.1evaluate0.21
evd2.3-6.1evgam1.0.0
ewoc0.3.0Exact3.2
exams2.4-0exdex1.2.1
experiment1.2.1expint0.1-8
expm0.999-7ExPosition2.8.23
expsmooth2.3extraDistr1.9.1
extrafont0.19extrafontdb1.0
ez4.4-0fable0.3.3
fable.prophet0.1.0fabletools0.3.3
FactoMineR2.8factorstochvol1.0.1
fanplot4.0.0fansi1.0.4
faoutlier0.7.6faraway1.0.8
farver2.1.1fastDummies1.6.3
fastGHQuad1.0.1fastICA1.2-3
fastmap1.1.1fastmatch1.1-3
FAVAR0.1.3fBasics4022.94
fda6.0.5fdaACF1.0.0
fdapace0.5.9fdrtool1.2.17
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RcppTN0.2-2RcppTOML0.2.2
RcppZiggurat0.1.6Rcsdp0.1.57.5
RCurl1.98-1.12rdbnomics0.6.4
Rdpack2.4Rdsdp1.0.5.2.1
re20.1.2reactable0.4.4
reactR0.4.4readabs0.4.13
readODS1.8.0readr2.1.4
readstata130.10.1readxl1.4.2
REBayes2.51recipes1.0.6
registry0.5-1regress1.3-21
regsem1.9.3regspec2.6
regtools1.7.0relations0.6-13
relimp1.0-5rematch1.0.1
rematch22.1.2remotes2.4.2
rentrez1.2.3renv0.17.3
replicateBE1.1.3reportr1.3.0
reprex2.0.2REQS0.8-13
resampledata0.3.1resde1.1
reshape0.8.9reshape21.4.4
reticulate1.28revdbayes1.5.1
rex1.2.1Rfast2.0.7
Rfast20.1.4rgen0.0.1
RGENERATE1.3.7rgenoud5.9-0.3
rgl1.1.3Rglpk0.6-5
RgoogleMaps1.4.5.3RGraphics3.0-2
Rgraphviz2.44.0rhandsontable0.3.8
rhdf52.44.0rhdf5filters1.12.1
Rhdf5lib1.22.0rhosa0.2.0
RhpcBLASctl0.23-42riingo0.3.1
ring1.0.4RInside0.2.18
rintrojs0.3.2Rirt0.0.2
riskCommunicator1.0.1ritis1.0.0
rjags4-14rJava1.0-6
RJDBC0.2-10RJDemetra0.2.2
rje1.12.1rjson0.2.21
RJSONIO1.3-1.8RKEA0.0-6
RKEAjars5.0-4rlang1.1.1
rle0.9.2rlecuyer0.3-7
Rlgt0.1-4Rlibeemd1.4.2
rlist0.4.6.2rmarkdown2.21
RMAWGEN1.3.7rmeta3.0
Rmpfr0.9-2rms6.7-0
rmutil1.1.10RMySQL0.10.25
rncl0.8.7rngtools1.5.2
rngWELL0.10-9RNifti1.5.0
RNiftyReg2.7.1rnn1.9.0
robfilter4.1.3RobKF1.0.2
RoBMA2.3.2robustbase0.95-1
rockchalk1.8.157ROCR1.0-11
rodd0.2-1roll1.1.6
Rook1.2ROOPSD0.3.8
rootSolve1.8.2.3roptim0.1.6
rotl3.0.14roxygen27.2.3
rpact3.3.4rpanel1.1-5.2
rpart.plot3.1.1rpf1.0.11
RPMG2.2-3RPostgres1.4.5
RPostgreSQL0.7-5RPPairwiseDesign1.0
rprojroot2.0.3rrcov1.7-3
rredlist0.7.1rrum0.2.0
rsample1.1.1rsdmx0.6-2
RSEIS4.1-4rsem0.5.0
Rsfar0.0.1RSGHB1.2.2
rsm2.10.3Rsolnp1.16
rsparse0.5.1RSpectra0.16-1
RSQLite2.3.1Rssa1.0.5
rstan2.21.8rstanarm2.21.4
rstantools2.3.1rstatix0.7.2
rstiefel1.0.1rstudioapi0.14
rsurface1.1.0RSurveillance0.2.1
rTensor1.4.8rtf0.4-14.1
RTFA0.1.0rticles0.25
RTransferEntropy0.2.21rts1.1-8
Rtsne0.16Rttf2pt11.3.12
rucrdtw0.1.4rugarch1.4-9
ruimtehol0.3.1rules1.0.2
RUnit0.4.32runjags2.2.1-7
runner0.4.3runstats1.1.0
Runuran0.38rust1.4.0
Rvcg0.22.1rversions2.1.2
rvest1.0.3Rvmmin2018-4.17.1
Rwave2.6-5RWeka0.4-46
RWekajars3.9.3-2rxode22.0.13
rxode2et2.0.10rxode2ll2.0.11
rxode2parse2.0.16rxode2random2.0.11
s21.1.3S4Vectors0.38.1
samadb0.2.6samplesize0.2-4
sandwich3.0-2sarima0.9.1
sass0.4.6satellite1.0.4
sazedR2.0.2sbgcop0.980
scales1.2.1scatterplot3d0.3-44
scoringRules1.1.1scoringutils1.1.0
ScottKnott1.3-0scs3.2.4
sde2.0.18sealasso0.1-3
seas0.6-0season0.3.15
seasonal1.9.0seasonalview0.3
seastests0.15.4seer1.1.8
segmented1.6-4selectr0.4-2
sem3.1-15semds0.9-6
SemiPar1.0-4.2semPlot1.1.6
SEMsens1.5.5semTools0.5-6
semtree0.9.18sendmailR1.4-0
SensoMineR1.26sentencepiece0.2.3
separationplot1.4seqDesign1.2
seqinr4.2-30seriation1.4.2
servr0.27sessioninfo1.2.2
setartree0.1.0setRNG2022.4-1
sets1.0-24sf1.0-12
sFFLHD0.1.2sfheaders0.4.2
sfsmisc1.1-15sftime0.2-0
sgd1.1.1sgeostat1.0-27
shades1.4.0shape1.4.6
shapefiles0.7.2shapes1.2.7
shiny1.7.4shiny.semantic0.4.3
shinyAce0.4.2shinybrms1.8.0
shinyBS0.61.1shinycssloaders1.0.0
shinydashboard0.7.2shinydashboardPlus2.0.3
shinyFiles0.9.3ShinyItemAnalysis1.5.0
shinyjs2.1.0shinystan2.6.0
shinytest1.5.3shinythemes1.2.0
shinyWidgets0.7.6showimage1.0.0
sigmoid1.4.0signal0.7-7
Sim.DiffProc4.8simcdm0.1.1
SimComp3.3simex1.8
simglm0.8.9SimInf9.5.0
simrel2.1.0simsem0.5-16
sirt3.12-66sitmo2.0.2
SkewHyperbolic0.4-0skmeans0.2-15
skpr1.3.0slam0.1-50
SLBDD0.0.4sleekts1.0.2
Sleuth22.0-5Sleuth31.0-3
SLHD2.1-1slider0.3.0
sm2.2-5.7.1smacof2.1-5
smooth3.2.0smoother1.1
smoots1.1.3smovie1.1.4
SMPracticals1.4-3sn2.1.1
sna2.7-1snakecase0.11.0
snow0.4-4SnowballC0.7.1
snowfall1.84-6.2SOAs1.3
soc.ca0.8.0socialmixr0.2.0
sodium1.2.1solrium1.2.0
sourcetools0.1.7-1sp1.6-0
sp23design0.9-1spacetime1.3-0
spam2.9-1spant2.12.0
sparseDFM1.0SparseFactorAnalysis1.0
SparseM1.81sparsevar0.1.0
SpatialEpi1.2.8SpatialExtremes2.1-0
spatialreg1.2-8spatstat3.0-5
spatstat.data3.0-1spatstat.explore3.1-0
spatstat.geom3.1-0spatstat.linnet3.1-0
spatstat.model3.2-3spatstat.random3.1-4
spatstat.sparse3.0-1spatstat.utils3.0-2
spBayes0.4-6spd2.0-1
spData2.2.2spdep1.2-8
spec0.1.7spectral2.0
speff2trial1.0.5spikeslab1.1.6
spikeSlabGAM1.1-19spINAR0.1.0
splancs2.01-43splines20.4.8
spTimer3.3.2sqldf0.4-11
SQUAREM2021.1srvyr1.2.0
ssanv1.1ssgraph1.15
ssize.fdr1.3ssizeRNA1.3.2
ssMousetrack1.1.6stabledist0.7-1
stabs0.6-4StanHeaders2.21.0-7
stars0.6-1STARTS1.3-8
startupmsg0.9.6statespacer0.5.0
statmod1.5.0statnet.common4.8.0
StatRank0.0.6steadyICA1.0
STFTS0.1.0stinepack1.4
stlplus0.5.1stm1.3.6
stochvol3.2.1stopwords2.3
stR0.5stringdist0.9.10
stringfish0.15.7stringi1.7.12
stringr1.5.0strucchange1.5-3
strucchangeRcpp1.5-3-1.0.4StructuralDecompose0.1.1
styler1.9.1subplex1.8
subscore3.3sufficientForecasting0.1.0
sugrrants0.2.8SuperLearner2.0-28
superml0.5.6SuppDists1.1-9.7
support.CEs0.5-0survcomp1.50.0
surveillance1.21.1survey4.2-1
survivalROC1.0.3.1survPresmooth1.1-11
svars1.3.11svd0.5.4
svglite2.1.1svs3.0.0
svUnit1.0.6swephR0.3.1
swirl2.4.5swirlify0.5.3
sylly0.1-6sym.arma1.0
symengine0.2.2symmoments1.2.1
synthesis1.2.3sys3.4.1
systemfit1.1-30systemfonts1.0.4
tables0.9.17tabnet0.3.0
TAM4.1-4targets1.1.3
tau0.0-24taxize0.9.100
tbrf0.1.5tcltk21.2-11
Tcomp1.0.1tdigest0.4.1
TeachingDemos2.12tempdisagg1.1
tensor1.5tensorA0.36.2
tensorflow2.11.0TensorPreAve1.1.0
tensorTS1.0.1TEQR6.0-0
tergm4.1.1terra1.7-29
tesseract5.1.0testcorr0.2.0
TestDataImputation2.3TestDesign1.5.1
testit0.13TestScorer1.7.2
testthat3.1.8TexExamRandomizer1.2.3
texreg1.38.6text2vec0.6.3
textcat1.0-8textir2.0-5
textplot0.2.2textrank0.3.1
textreuse0.1.5textshaping0.3.6
textTinyR1.1.7tfarima0.3.2
tfautograph0.3.2tfplot2021.6-1
tframe2015.12-1.1tfruns1.5.1
tgp2.4-21TH.data1.1-2
theft0.4.2.4thief0.3
ThreeArmedTrials1.0-4threeBrain0.2.9
ThreeGroups0.21threejs0.3.3
ThreeWay1.1.3thurstonianIRT0.12.1
tibble3.2.1tictoc1.2
Tides2.1tidygraph1.2.3
tidyLPA1.1.0tidymodels1.1.0
tidyquant1.0.7tidyr1.3.0
tidyselect1.2.0tidytext0.4.1
tidytree0.4.2tidyverse2.0.0
tiff0.1-11timechange0.2.0
timeDate4022.108timeSeries4030.106
timeseriesdb1.0.0-1.1.2timetk2.8.3
timsac1.3.8tinytex0.45
tis1.39tkrplot0.0-27
tm0.7-11tm.plugin.alceste1.1
tm.plugin.dc0.2-10tm.plugin.europresse1.4
tm.plugin.factiva1.8tm.plugin.lexisnexis1.4.1
tm.plugin.mail0.2-2TMB1.9.4
tmvnsim1.0-2tmvtnorm1.5
tokenizers0.3.0tokenizers.bpe0.1.1
toOrdinal1.3-0.0topicdoc0.1.1
topicmodels0.2-14topicmodels.etm0.1.0
torch0.10.0torchaudio0.3.1.9000
torchdatasets0.3.0torchvision0.5.1
tpr0.3-3tractor.base3.3.5.1
TransPhylo1.4.5trapezoid2.0-2
tree1.0-43TreeBUGS1.5.0
treeio1.24.0trend1.1.5
trendeval0.1.0trending0.1.0
TrialSize1.4triangle1.0
triebeard0.4.1trimcluster0.1-5
tripack1.3-9.1TripleR1.5.4
TruncatedNormal2.2.2truncdist1.0-2
truncnorm1.0-9truncreg0.2-5
trust0.1-8TSA1.3.1
TSANN0.1.0tsbox0.4.1
tsBSS1.0.0TSclust1.3.1
tscount1.4.3tsdb1.1-0
tsdecomp0.2TSdeeplearning0.1.0
tsdisagg20.1.0TSdisaggregation2.0.0
TSdist3.7.1tsDyn11.0.4
TSEntropies0.9tseries0.10-54
tseriesChaos0.1-13.1tseriesEntropy0.6-0
tseriesTARMA0.3-2tsfeatures1.1
tsfknn0.5.1tsibble1.1.3
tsibbledata0.4.1tsibbletalk0.1.0
tsintermittent1.10tsiR0.4.3
TSLSTM0.1.0tsModel0.6-1
tsoutliers0.6-8TSP1.2-4
tsPI1.0.3TSrepr1.1.0
tsrobprep0.3.2tssim0.1.7
TSstudio0.1.6TSTutorial1.2.6
tsutils0.9.3tswge2.1.0
TTR0.24.3tune1.1.1
tweenr2.0.2tzdb0.4.0
ubiquity2.0.0ucminf1.1-4.1
UComp4.0.2udpipe0.8.11
ugatsdb0.2.3uGMAR3.4.4
UnifiedDoseFinding0.1.10units0.8-2
unrepx1.0-2urca1.3-3
urlchecker1.0.1urltools1.7.3
uroot2.1-2usdata0.2.0
usethis2.1.6utf81.2.3
uuid1.1-0uwot0.1.14
V84.3.0VAR.etp1.0
VARDetect0.1.6vars1.5-9
VARshrink0.3.1VCA1.4.5
vcd1.4-11vcdExtra0.8-4
vctrs0.6.2vdg1.2.2
VedicDateTime0.1.4vegan2.6-4
VennDiagram1.7.3venneuler1.1-3
VGAM1.1-8VGAMdata1.1-8
vglmer1.0.3viridis0.6.3
viridisLite0.4.2visNetwork2.1.2
visualize4.4.0vpc1.2.2
vroom1.6.3waiter0.2.5
waldo0.5.1warp0.2.0
WaveletComp1.1wavelets0.3-0.2
waveslim1.8.4wavethresh4.7.2
wavScalogram1.1.2wCorr1.9.6
webdriver1.0.6webshot0.5.4
weights1.0.4whisker0.4.1
WikidataQueryServiceR1.0.0WikidataR2.3.3
WikipediR1.5.0wikitaxa0.4.0
withr2.5.0wk0.7.3
wktmo1.0.5wnl0.7.3
wooldridge1.4-3word2vec0.3.4
wordcloud2.6wordnet0.1-16
workflows1.1.3workflowsets1.0.1
worrms0.4.2wpp20171.2-3
wpp20191.1-1WrightMap1.3
writexl1.4.2x121.10.3
x13binary1.1.57-3xfun0.39
xgboost1.7.5.1xgxr1.1.2
XLConnect1.0.7xlsx0.6.5
xlsxjars0.6.1XML3.99-0.14
xml21.3.4xopen1.0.0
xplain0.2.2xpose0.4.16
xpose.nlmixr20.4.0xpose44.7.2
xtable1.8-4xts0.13.1
XVector0.40.0xxIRT2.1.2
yaImpute1.0-33yaml2.3.7
yardstick1.2.0yesno0.1.2
yuima1.15.22yulab.utils0.0.6
zeallot0.1.0zic0.9.1
ZIM1.1.0ZINARp0.1.0
zip2.3.0zipfR0.6-70
zlibbioc1.46.0zoo1.8-12
ZRA0.2

RStudio Server

R: 4.3.0

rstudio-server: 2023.03.0

CUDA Version: 11.7

GPU Driver Version: 515.43.04

Release Notes

Installed additional R packages covering various domains such as Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, and natural language processing.

R packages (2289)

packageversionpackageversion
abc2.2.1abc.data1.0
abcrf1.9abglasso0.1.1
abind1.4-5abtest1.0.1
accrualPlot1.0.7acebayes1.10
acepack1.4.1acp2.1
ACSWR1.0actuar3.3-2
ada2.0-5adaptivetau2.2-3
adaptMCMC1.4adaptr1.3.1
adaptsmoFMRI1.2adaptTest1.1
ade41.7-22ade4TkGUI0.3-1
adegenet2.1.10adegraphics1.0-18
adehabitatLT0.3.27adehabitatMA0.3.16
ADGofTest0.3adimpro0.9.5
admisc0.31AdMit2.1.9
AER1.2-10affy1.78.0
affyio1.70.0africamonitor0.2.3
agricolae1.3-5agricolaeplotr0.2.2
agridat1.21airports0.1.0
akima0.6-3.4alabama2022.4-1
AlgDesign1.2.1almanac1.0.0
alphavantager0.1.3ALTopt0.1.2
Amelia1.8.1ammiBayes1.0-1
AMR2.0.0AnaCoDa0.1.4.4
anacor1.1-4animation2.7
AnnotationDbi1.62.1anytime0.3.9
aod1.3.2AovBay0.1.0
ape5.7-1APFr1.0.2
aplot0.1.10approximator1.2-7
ARCensReg2.1ArchaeoChron0.1
ArchaeoPhases1.8ArDec2.1-1
ARDL0.2.3ardl.nardl1.2.3
arfima1.8-1arm1.13-1
aroma.apd0.6.1arrangements1.1.9
ars0.6ascii2.4
asd2.2ash1.0-15
ashr2.2-54askpass1.1
aspect1.0-6ASSA2.0
assertthat0.2.1astsa2.0
asymmetry2.0.4ata1.1.1
aTSA3.1.2attention0.3.0
AUC0.3.2audio0.1-10
automap1.1-9autostsm3.1.0
av0.8.3aweek1.0.3
aws2.5-1awsMethods1.1-1
BACCO2.0-9BACCT1.0
backports1.4.1baggr0.7.6
bain0.2.8BaM1.0.3
bama1.3.0bamdit3.4.0
bamlss1.1-9bang1.0.1
BANOVA1.2.1BART2.9.4
bartBMA1.0bartCause1.0-6
bartMachine1.3.3.1bartMachineJARs1.2.1
BAS1.6.4basad0.3.0
base642.0.1base64enc0.1-3
base64url1.4basicMCMCplots0.2.7
BaSkePro0.1.0BASS1.2.2
BatchExperiments1.4.3BatchJobs1.9
baycn1.2.0bayefdr0.2.1
bayes4psy1.2.11bayesAB1.1.3
bayesammi0.1.0bayesanova1.5
BayesARIMAX0.1.1BayesBinMix1.4.1
bayesbio1.0.0bayesboot0.2.2
BayesBP1.1bayesbr0.0.1.0
BayesCACE1.2.3BayesCombo1.0
BayesComm0.1-2bayescopulareg0.1.3
bayescount0.9.99-8BayesCR2.1
bayesCT0.99.3BayesCTDesign0.6.1
BayesDA2012.04-1bayesDccGarch3.0.4
bayesdfa1.2.0bayesdistreg0.1.0
bayesDP1.3.6BayesFactor0.9.12-4.4
BayesFM0.1.5bayesforecast1.0.1
bayesGAM0.0.2bayesGARCH2.1.10
BayesGOF5.2BayesGPfit1.1.0
BayesGWQS0.1.1bayesian0.0.9
bayesianETAS1.0.3Bayesiangammareg0.1.0
BayesianGLasso0.2.0BayesianLaterality0.1.1
BayesianNetwork0.1.5BayesianTools0.1.8
bayesImageS0.6-1BayesLCA1.9
bayesLife5.1-1bayeslincom1.3.0
BayesLN0.2.8BayesLogit2.1
bayesloglin1.0.1bayeslongitudinal0.1.0
bayesm3.1-5BayesMallows1.3.0
BayesMassBal1.1.0bayesmeta3.2
bayesmix0.7-6bayesnec2.1.0.3
bayesplot1.10.0bayesQR2.3
bayestestR0.13.1bayesTFR7.3-2
BayesTools0.2.13BayesTree0.3-1.4
BayesVarSel2.2.5BayesX0.3-1.1
BAYSTAR0.2-10BB2019.10-1
BBmisc1.13BCBCSF1.0-1
BCE2.2.0Bchron4.7.6
bcp4.0.3bcrm0.5.4
BDgraph2.72bdsmatrix1.3-6
BE0.2.4beadarray2.50.0
BeadDataPackR1.52.0beepr1.3
beeswarm0.4.0bentcableAR0.3.1
Bergm5.0.5BEST0.5.4
BetaBit2.1betafunctions1.8.1
betareg3.1-4BETS0.4.9
bets.covid191.0.0beyondWhittle1.1.3
bezier1.1.2bfast1.6.1
BGLR1.1.0BGVAR2.5.2
BH1.81.0-1BHH22016.05.31
BiasedUrn2.0.9biganalytics1.1.21
bigD0.2.0biglm0.9-2.1
bigmemory4.6.1bigmemory.sri0.1.6
bigsplines1.1-1bigtime0.2.1
BigVAR1.1.2bindr0.1.1
bindrcpp0.2.2binom1.1-1.1
binomSamSize0.1-5binr1.1.1
binseqtest1.0.3Biobase2.60.0
BiocGenerics0.46.0BiocManager1.30.20
BiocParallel1.34.1BiocVersion3.17.1
bioinactivation1.2.3biomformat1.28.0
bioOED0.2.1Biostrings2.68.0
birtr1.0.0bit4.0.5
bit644.0.5bitops1.0-7
biwavelet0.20.21bkmr0.2.2
blavaan0.4-7blob1.2.4
blocklength0.1.5blockrand1.5
blocksdesign4.9blockTools0.6.4
BLR1.6BMA3.18.17
bmixture1.7BMS0.3.5
BMTAR0.1.1bnlearn4.8.3
BNPTSclust2.0BNSP2.2.2
boa1.1.8-2boilerpipeR1.3.2
BOIN2.7.2bold1.3.0
Bolstad0.2-41Bolstad21.0-29
bookdown0.34Boom0.9.11
BoomSpikeSlab1.2.5bootnet1.5.1
BootPR0.70bootstrap2019.6
bootUR1.0.2bpca1.3-4
bqtl1.0-34BradleyTerry21.1-2
brainR1.6.0breakfast2.3
brew1.0-8brglm0.7.2
brglm20.9bridgesampling1.1-2
brio1.1.3brms2.19.0
Brobdingnag1.2-9broom1.0.4
bsamGP1.2.4bslib0.4.2
BsMD2020.4.30bspec1.6
bspmma0.1-2bssm2.0.1
BSSprep0.1bsts0.9.9
bsvars1.0.0BTLLasso0.1-11
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UnifiedDoseFinding0.1.10units0.8-2
unrepx1.0-2urca1.3-3
urlchecker1.0.1urltools1.7.3
uroot2.1-2usdata0.2.0
usethis2.1.6utf81.2.3
uuid1.1-0uwot0.1.14
V84.3.0VAR.etp1.0
VARDetect0.1.6vars1.5-9
VARshrink0.3.1VCA1.4.5
vcd1.4-11vcdExtra0.8-4
vctrs0.6.2vdg1.2.2
VedicDateTime0.1.4vegan2.6-4
VennDiagram1.7.3venneuler1.1-3
VGAM1.1-8VGAMdata1.1-8
vglmer1.0.3viridis0.6.3
viridisLite0.4.2visNetwork2.1.2
visualize4.4.0vpc1.2.2
vroom1.6.3waiter0.2.5
waldo0.5.1warp0.2.0
WaveletComp1.1wavelets0.3-0.2
waveslim1.8.4wavethresh4.7.2
wavScalogram1.1.2wCorr1.9.6
webdriver1.0.6webshot0.5.4
weights1.0.4whisker0.4.1
WikidataQueryServiceR1.0.0WikidataR2.3.3
WikipediR1.5.0wikitaxa0.4.0
withr2.5.0wk0.7.3
wktmo1.0.5wnl0.7.3
wooldridge1.4-3word2vec0.3.4
wordcloud2.6wordnet0.1-16
workflows1.1.3workflowsets1.0.1
worrms0.4.2wpp20171.2-3
wpp20191.1-1WrightMap1.3
writexl1.4.2x121.10.3
x13binary1.1.57-3xfun0.39
xgboost1.7.5.1xgxr1.1.2
XLConnect1.0.7xlsx0.6.5
xlsxjars0.6.1XML3.99-0.14
xml21.3.4xopen1.0.0
xplain0.2.2xpose0.4.16
xpose.nlmixr20.4.0xpose44.7.2
xtable1.8-4xts0.13.1
XVector0.40.0xxIRT2.1.2
yaImpute1.0-33yaml2.3.7
yardstick1.2.0yesno0.1.2
yuima1.15.22yulab.utils0.0.6
zeallot0.1.0zic0.9.1
ZIM1.1.0ZINARp0.1.0
zip2.3.0zipfR0.6-70
zlibbioc1.46.0zoo1.8-12
ZRA0.2

RStudio Server

R: 4.3.0

rstudio-server: 2023.03.0

CUDA Version: 11.7

GPU Driver Version: 515.43.04

Release Notes

Updated R to 4.3.0, rstudio-server to 2023.03.0, and R packages to newer versions.

R packages

packageversionpackageversion
abc2.2.1abc.data1.0
abind1.4-5acepack1.4.1
actuar3.3-2ada2.0-5
ade41.7-22ade4TkGUI0.3-1
adegraphics1.0-18adehabitatLT0.3.27
adehabitatMA0.3.16admisc0.31
affy1.78.0affyio1.70.0
agricolae1.3-5akima0.6-3.4
AlgDesign1.2.1alphavantager0.1.3
Amelia1.8.1AnnotationDbi1.62.1
anytime0.3.9ape5.7-1
aplot0.1.10arm1.13-1
aroma.apd0.6.1ascii2.4
ash1.0-15askpass1.1
assertthat0.2.1AUC0.3.2
av0.8.3backports1.4.1
base642.0.1base64enc0.1-3
bayesplot1.10.0BB2019.10-1
BDgraph2.72bdsmatrix1.3-6
beadarray2.50.0BeadDataPackR1.52.0
BGLR1.1.0BH1.81.0-1
biganalytics1.1.21bigD0.2.0
biglm0.9-2.1bigmemory4.6.1
bigmemory.sri0.1.6bindr0.1.1
bindrcpp0.2.2Biobase2.60.0
BiocGenerics0.46.0BiocManager1.30.20
BiocParallel1.34.1BiocVersion3.17.1
biomformat1.28.0Biostrings2.68.0
bit4.0.5bit644.0.5
bitops1.0-7blob1.2.4
BLR1.6bold1.3.0
bootstrap2019.6bpca1.3-4
BradleyTerry21.1-2brew1.0-8
brglm0.7.2brglm20.9
bridgesampling1.1-2brio1.1.3
brms2.19.0Brobdingnag1.2-9
broom1.0.4bslib0.4.2
BsMD2020.4.30ca0.71.1
cachem1.0.8calibrator1.2-8
callr3.7.3car3.1-2
carData3.0-5caret6.0-94
caTools1.18.2CellNOptR1.46.0
cellranger1.1.0checkmate2.2.0
chk0.8.1chron2.3-61
CircStats0.2-6classInt0.4-9
cli3.6.1clipr0.8.0
clock0.6.1clusterGeneration1.3.7
CNORode1.42.0coda0.19-4
coin1.4-2collapse1.9.5
colorspace2.1-0colourpicker1.2.0
combinat0.0-8commonmark1.9.0
conditionz0.1.0conf.design2.0.0
conflicted1.2.0contfrac1.1-12
coro1.0.3corpcor1.6.10
corrgram1.14corrplot0.92
cpp110.4.3crayon1.5.2
credentials1.3.2crosstalk1.2.0
crul1.3ctv0.9-4
cubature2.0.4.6curl5.0.0
CVST0.2-3d3Network0.5.2.1
DAAG1.25.4data.table1.14.8
DataExplorer0.8.2datapasta3.1.0
DBI1.1.3dbplyr2.3.2
deldir1.0-6dendextend1.17.1
DEoptimR1.0-13Deriv4.1.3
desc1.4.2deSolve1.35
devtools2.4.5dfidx0.0-5
dfoptim2020.10-1diagram1.6.5
DiagrammeR1.0.9dials1.2.0
DiceDesign1.9dichromat2.0-0.1
diffobj0.3.5digest0.6.31
dimRed0.2.6diptest0.76-0
discretization1.0-1.1distributional0.3.2
doBy4.6.16doc2vec0.2.0
DoE.base1.2-2doMC1.3.8
doParallel1.0.17dotCall641.0-2
downlit0.4.2downloader0.4
dplyr1.1.2dqrng0.3.0
DRR0.0.4DT0.27
dtplyr1.3.1dygraphs1.1.1.6
dynamicTreeCut1.63-1e10711.7-13
EbayesThresh1.4-12EBImage4.42.0
effects4.2-2ellipse0.4.5
ellipsis0.3.2elliptic1.4-0
emulator1.2-21enrichwith0.3.1
equivalence0.7.2estimability1.4.1
ETLUtils1.5evaluate0.21
expint0.1-8expm0.999-7
extraDistr1.9.1extrafont0.19
extrafontdb1.0fansi1.0.4
farver2.1.1fastICA1.2-3
fastmap1.1.1fastmatch1.1-3
fda6.0.5fdrtool1.2.17
fds1.8fdth1.2-6
ff4.0.9fftwtools0.9-11
fields14.1filehash2.4-5
filelock1.0.2flashClust1.01-2
flexmix2.3-19FNN1.1.3.2
fontawesome0.5.1forcats1.0.0
foreach1.5.2forecast8.21
formatR1.14Formula1.2-5
fpc2.2-10fracdiff1.5-2
fs1.6.2functional0.6
furrr0.3.1futile.logger1.4.3
futile.options1.0.1future1.32.0
future.apply1.10.0gam1.22-2
gamlss5.4-12gamlss.data6.0-2
gamlss.dist6.0-5gargle1.4.0
gclus1.3.2gdata2.19.0
geepack1.3.9genalg0.2.1
generics0.1.3genetics1.3.8.1.3
GenomeInfoDb1.36.0GenomeInfoDbData1.2.10
GenomicRanges1.52.0GEOquery2.68.0
geosphere1.5-18gert1.9.2
ggalt0.4.0ggdendro0.1.23
ggforce0.4.1ggformula0.10.4
ggfun0.0.9ggmap3.0.2
ggplot23.4.2ggplotify0.1.0
ggrepel0.9.3ggridges0.5.4
ggstance0.3.6ggtree3.8.0
ggvis0.4.8gh1.4.0
git2r0.32.0gitcreds0.1.2
glassoFast1.0gld2.6.6
glmnet4.1-7globals0.16.2
glue1.6.2gmm1.7
gmodels2.18.1.1gmp0.7-1
GO.db3.17.0goftest1.2-3
googledrive2.1.0googlesheets41.1.0
googleVis0.7.1gower1.0.1
GPArotation2023.3-1GPfit1.0-8
gplots3.1.3gradethis0.2.12.9004
graph1.78.0gridBase0.4-7
gridExtra2.3gridGraphics0.5-1
gridSVG1.7-5grImport0.9-7
grImport20.2-0gsubfn0.7
gt0.9.0gtable0.3.3
gtools3.9.4HaploSim1.8.4.2
hardhat1.3.0haven2.5.2
hdrcde3.4hexbin1.28.3
hflights0.1HH3.1-49
highlight0.5.1highr0.10
Hmisc5.1-0hms1.1.3
htmlTable2.4.1htmltools0.5.5
htmlwidgets1.6.2httpcode0.3.0
httpuv1.6.10httr1.4.6
httr20.2.3HydroMe2.0-1
HyperbolicDist0.6-4hypergeo1.2-13
ICC2.4.0Icens1.72.0
ids1.0.1igraph1.4.2
igraphdata1.0.1illuminaio0.42.0
impute1.74.1ineq0.2-13
infer1.0.4influenceR0.1.0.2
ini0.3.1inline0.3.19
insight0.19.1interp1.1-4
intervals0.15.3inum1.0-5
ipred0.9-14IRanges2.34.0
irlba2.3.5.1Iso0.0-18.1
isoband0.2.7iterators1.0.14
itertools0.1-3janitor2.2.0
jpeg0.1-10jquerylib0.1.4
jsonlite1.8.4juicyjuice0.1.0
KEGGREST1.40.0kernelFactory0.3.0
kernlab0.9-32klaR1.7-2
knitr1.42ks1.14.0
labeling0.4.2labelled2.11.0
LaF0.8.4Lahman11.0-0
lambda.r1.2.4lars1.3
later1.3.1latticeExtra0.6-30
lava1.7.2.1lavaan0.6-15
lavaan.survey1.1.3.1lazyeval0.2.2
lcda0.3.1leaflet2.1.2
leaflet.providers1.9.0leaps3.1
LearnBayes2.15.1learnr0.11.3.9000
lgr0.4.4lhs1.1.6
libcoin1.0-9lifecycle1.0.3
LIM1.4.7limma3.56.1
limSolve1.5.6lisrelToR0.1.5
listenv0.9.0lme41.1-33
lmom2.9lmtest0.9-40
locfit1.5-9.7lokern1.1-10
loo2.6.0lpSolve5.6.18
lubridate1.9.2luz0.4.0
magic1.6-1magrittr2.0.3
manipulateWidget0.11.1mapproj1.2.11
maps3.4.1maptools1.1-6
markdown1.6MassSpecWavelet1.66.0
Matching4.10-8MatchIt4.5.3
mathjaxr1.6-0matrixcalc1.0-6
MatrixModels0.5-1matrixStats0.63.0
maxLik1.5-2mboost2.9-7
mclust6.0.0mcmc0.9-7
MCMCglmm2.34MEIGOR1.33.0
memoise2.0.1MEMSS0.9-3
Metrics0.1.4mi1.1
mice3.15.0microbenchmark1.4.10
mime0.12miniUI0.1.1.1
minpack.lm1.2-3minqa1.2.5
misc3d0.9-1miscTools0.6-28
mitools2.4mixOmics6.24.0
mlbench2.1-3.1mlmRev1.0-8
mlogit1.1-1mlr30.16.0
mlr3measures0.5.0mlr3misc0.11.0
mnormt2.1.1modeldata1.1.0
modelenv0.1.1ModelMetrics1.2.2.2
modelr0.1.11modeltime1.2.6
modeltools0.2-23moments0.14.1
mondate0.10.02mosaic1.8.4.2
mosaicCore0.9.2.1mosaicData0.20.3
mratios1.4.2multcomp1.4-23
multicool0.1-12multtest2.56.0
munsell0.5.0mvMORPH1.1.7
mvtnorm1.1-3natserv1.0.0
network1.18.1networkD30.4
NISTnls0.9-13nleqslv3.3.4
nloptr2.0.3nls20.3-3
nlstools2.0-0nnls1.4
nortest1.0-4np0.60-17
numbers0.8-5numDeriv2016.8-1.1
odbc1.3.4openssl2.0.6
openxlsx4.2.5.2optextras2019-12.4
optimParallel1.0-2ordinal2022.11-16
padr0.6.2PairedData1.1.1
palmerpenguins0.1.1paradox0.11.1
parallelly1.35.0parsnip1.1.0
partitions1.10-7party1.3-13
partykit1.2-20pastecs1.3.21
patchwork1.1.2pbapply1.7-0
pbivnorm0.6.0pbkrtest0.5.2
pbmcapply1.5.1PBSmapping2.73.2
pcaMethods1.92.0pcaPP2.0-3
pedigree1.4.2PerformanceAnalytics2.0.4
permute0.9-7phangorn2.11.1
phyloseq1.44.0phytools1.5-1
pillar1.9.0pins1.1.0
pixmap0.4-12pkgbuild1.4.0
pkgconfig2.0.3pkgdown2.0.7
pkgload1.3.2plm2.6-3
plogr0.2.0plot3D1.4
plotly4.10.1plotrix3.8-2
pls2.8-1plyr1.8.8
png0.1-8poLCA1.6.0.1
polspline1.1.22polyclip1.10-4
polycor0.8-1polynom1.4-1
posterior1.4.1prabclus2.3-2
pracma2.4.2praise1.0.0
preprocessCore1.62.1prettyunits1.1.1
princurve2.1.6pROC1.18.0
processx3.8.1prodlim2023.03.31
profileModel0.6.1profvis0.3.8
progress1.2.2progressr0.13.0
proj41.0-12promises1.2.0.1
prophet1.0proto1.0.0
proxy0.4-27PRROC1.3.1
ps1.7.5pscl1.5.5
psy1.2psych2.3.3
purrr1.0.1qap0.1-2
qtl1.60quadprog1.5-8
Quandl2.11.0quantmod0.4.22
quantreg5.95questionr0.7.8
qvalue2.32.0qvcalc1.0.2
R.cache0.16.0R.devices2.17.1
R.filesets2.15.0R.huge0.9.0
R.matlab3.7.0R.methodsS31.8.2
R.oo1.25.0R.rsp0.45.0
R.utils2.12.2R2HTML2.3.3
R2OpenBUGS3.2-3.2.1R2WinBUGS2.1-21
R62.5.1ragg1.2.5
rainbow3.7randomForest4.7-1.1
rappdirs0.3.3rARPACK0.11-0
raster3.6-20ratelimitr0.4.1
rbenchmark1.0.0RBGL1.76.0
rbibutils2.2.13Rcgmin2022-4.30
rcmdcheck1.4.0RColorBrewer1.1-3
Rcpp1.0.10RcppAnnoy0.0.20
RcppArmadillo0.12.2.0.0RcppEigen0.3.3.9.3
RcppParallel5.1.7RcppProgress0.4.2
RcppRoll0.3.0Rcsdp0.1.57.5
RCurl1.98-1.12Rdpack2.4
reactable0.4.4reactR0.4.4
readr2.1.4readstata130.10.1
readxl1.4.2recipes1.0.6
registry0.5-1regress1.3-21
relimp1.0-5rematch1.0.1
rematch22.1.2remotes2.4.2
rentrez1.2.3renv0.17.3
reprex2.0.2reshape0.8.9
reshape21.4.4rex1.2.1
rgl1.1.3RgoogleMaps1.4.5.3
RGraphics3.0-2Rgraphviz2.44.0
rhdf52.44.0rhdf5filters1.12.1
Rhdf5lib1.22.0riingo0.3.1
ritis1.0.0rJava1.0-6
RJDBC0.2-10rjson0.2.21
RJSONIO1.3-1.8rlang1.1.1
rlecuyer0.3-7rmarkdown2.21
rmeta3.0Rmpfr0.9-2
rms6.7-0RMySQL0.10.25
rncl0.8.7robustbase0.95-1
ROCR1.0-11Rook1.2
rotl3.0.14roxygen27.2.3
RPostgreSQL0.7-5rprojroot2.0.3
rredlist0.7.1rsample1.1.1
Rsolnp1.16RSpectra0.16-1
RSQLite2.3.1rstan2.21.8
rstantools2.3.1rstudioapi0.14
Rttf2pt11.3.12RUnit0.4.32
rversions2.1.2rvest1.0.3
Rvmmin2018-4.17.1s21.1.3
S4Vectors0.38.1sandwich3.0-2
sass0.4.6scales1.2.1
scatterplot3d0.3-44ScottKnott1.3-0
sealasso0.1-3segmented1.6-4
selectr0.4-2sem3.1-15
SemiPar1.0-4.2semTools0.5-6
seqinr4.2-30seriation1.4.2
sessioninfo1.2.2setRNG2022.4-1
sets1.0-24sf1.0-12
sfsmisc1.1-15shape1.4.6
shapefiles0.7.2shiny1.7.4
shiny.semantic0.4.3shinyjs2.1.0
shinystan2.6.0shinythemes1.2.0
SimComp3.3simsem0.5-16
sitmo2.0.2slam0.1-50
slider0.3.0sn2.1.1
sna2.7-1snakecase0.11.0
snow0.4-4snowfall1.84-6.2
solrium1.2.0sourcetools0.1.7-1
sp1.6-0spam2.9-1
SparseM1.81SpatialExtremes2.1-0
spatstat3.0-5spatstat.data3.0-1
spatstat.explore3.1-0spatstat.geom3.1-0
spatstat.linnet3.1-0spatstat.model3.2-3
spatstat.random3.1-4spatstat.sparse3.0-1
spatstat.utils3.0-2spData2.2.2
spdep1.2-8SQUAREM2021.1
ssgraph1.15stabs0.6-4
StanHeaders2.21.0-7statmod1.5.0
statnet.common4.8.0stringi1.7.12
stringr1.5.0strucchange1.5-3
styler1.9.1subplex1.8
superml0.5.6SuppDists1.1-9.7
survcomp1.50.0survey4.2-1
survivalROC1.0.3.1survPresmooth1.1-11
svUnit1.0.6sys3.4.1
systemfonts1.0.4tables0.9.17
tabnet0.3.0taxize0.9.100
tensor1.5tensorA0.36.2
terra1.7-29testit0.13
testthat3.1.8textplot0.2.2
textshaping0.3.6TH.data1.1-2
threejs0.3.3tibble3.2.1
tidymodels1.1.0tidyquant1.0.7
tidyr1.3.0tidyselect1.2.0
tidytree0.4.2tidyverse2.0.0
tiff0.1-11timechange0.2.0
timeDate4022.108timeSeries4021.105
timetk2.8.3tinytex0.45
tis1.39tkrplot0.0-27
tmvtnorm1.5topicmodels.etm0.1.0
torch0.10.0torchaudio0.3.1.9000
torchdatasets0.3.0torchvision0.5.1
treeio1.24.0triebeard0.4.1
trimcluster0.1-5tripack1.3-9.1
truncnorm1.0-9truncreg0.2-5
tseries0.10-54tsfeatures1.1
TSP1.2-4TTR0.24.3
tune1.1.1tweenr2.0.2
tzdb0.3.0ucminf1.1-4.1
udpipe0.8.11units0.8-2
urca1.3-3urlchecker1.0.1
urltools1.7.3usethis2.1.6
utf81.2.3uuid1.1-0
uwot0.1.14V84.3.0
vcd1.4-11vctrs0.6.2
vegan2.6-4VGAM1.1-8
VGAMdata1.1-8viridis0.6.3
viridisLite0.4.2visNetwork2.1.2
vroom1.6.3waldo0.5.1
warp0.2.0waveslim1.8.4
wavethresh4.7.2webshot0.5.4
whisker0.4.1WikidataQueryServiceR1.0.0
WikidataR2.3.3WikipediR1.5.0
wikitaxa0.4.0withr2.5.0
wk0.7.3word2vec0.3.4
workflows1.1.3workflowsets1.0.1
worrms0.4.2xfun0.39
xgboost1.7.5.1XLConnect1.0.7
xlsx0.6.5xlsxjars0.6.1
XML3.99-0.14xml21.3.4
xopen1.0.0xtable1.8-4
xts0.13.1XVector0.40.0
yaml2.3.7yardstick1.2.0
yulab.utils0.0.6zeallot0.1.0
zip2.3.0zlibbioc1.46.0
zoo1.8-12

RStudio Server

R: 4.2.3

rstudio-server: 2022.12.0-353

CUDA Version: 12.0

GPU Driver Version: 525.85.12

Release Notes

Increased the maximum number of open connections to 1024, with three of them allocated for stdin, stdout, and stderr.

R packages

packageversionpackageversion
abc2.2.1abc.data1.0
abind1.4-5ACD1.5.3
acepack1.4.1actuar3.3-2
ada2.0-5ade41.7-22
ade4TkGUI0.3-1adegraphics1.0-18
adehabitatLT0.3.26adehabitatMA0.3.15
admisc0.31affxparser1.70.0
affy1.76.0affyio1.68.0
agricolae1.3-5akima0.6-3.4
AlgDesign1.2.1alphavantager0.1.2
Amelia1.8.1AnnotationDbi1.60.2
anytime0.3.9ape5.7-1
aplot0.1.10arm1.13-1
aroma.apd0.6.1ascii2.4
ash1.0-15askpass1.1
assertthat0.2.1AUC0.3.2
av0.8.3backports1.4.1
base642.0.1base64enc0.1-3
baseballr1.3.0bayesplot1.10.0
BB2019.10-1BDgraph2.72
bdsmatrix1.3-6beadarray2.48.0
BeadDataPackR1.50.0BGLR1.1.0
BH1.81.0-1biganalytics1.1.21
bigD0.2.0biglars1.0.2
biglm0.9-2.1bigmemory4.6.1
bigmemory.sri0.1.6bigml0.1.2
bindr0.1.1bindrcpp0.2.2
Biobase2.58.0BiocGenerics0.44.0
BiocManager1.30.20BiocParallel1.32.5
BiocVersion3.16.0biomformat1.26.0
Biostrings2.66.0bit4.0.5
bit644.0.5bitops1.0-7
blob1.2.4BLR1.6
bold1.2.0bootstrap2019.6
bpca1.3-4BradleyTerry21.1-2
brew1.0-8brglm0.7.2
brglm20.9bridgesampling1.1-2
brio1.1.3brms2.19.0
Brobdingnag1.2-9broom1.0.4
bslib0.4.2BsMD2020.4.30
ca0.71.1cachem1.0.7
calibrator1.2-8callr3.7.3
car3.1-1carData3.0-5
caret6.0-93caTools1.18.2
CellNOptR1.44.0cellranger1.1.0
checkmate2.1.0chron2.3-60
CircStats0.2-6classInt0.4-9
cli3.6.0clipr0.8.0
clock0.6.1clusterGeneration1.3.7
CNORode1.40.0coda0.19-4
coin1.4-2collapse1.9.3
colorspace2.1-0colourpicker1.2.0
combinat0.0-8commonmark1.9.0
conditionz0.1.0conf.design2.0.0
conflicted1.2.0contfrac1.1-12
coro1.0.3corpcor1.6.10
corrgram1.14corrplot0.92
cpp110.4.3crayon1.5.2
credentials1.3.2crosstalk1.2.0
crul1.3ctv0.9-4
cubature2.0.4.6curl5.0.0
CVST0.2-3d3Network0.5.2.1
DAAG1.25.4data.table1.14.8
DataExplorer0.8.2datapasta3.1.0
DBI1.1.3dbplyr2.3.1
deldir1.0-6dendextend1.16.0
DEoptimR1.0-11Deriv4.1.3
desc1.4.2deSolve1.35
devtools2.4.5dfidx0.0-5
dfoptim2020.10-1diagram1.6.5
DiagrammeR1.0.9dials1.1.0
DiceDesign1.9dichromat2.0-0.1
diffobj0.3.5digest0.6.31
dimRed0.2.6diptest0.76-0
discretization1.0-1.1distributional0.3.1
doBy4.6.16doc2vec0.2.0
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doParallel1.0.17dotCall641.0-2
downlit0.4.2downloader0.4
dplyr1.1.0dqrng0.3.0
DRR0.0.4DT0.27
dtplyr1.3.0dummies1.5.6
dygraphs1.1.1.6dynamicTreeCut1.63-1
e10711.7-13EbayesThresh1.4-12
EBImage4.40.0effects4.2-2
ellipse0.4.3ellipsis0.3.2
elliptic1.4-0emulator1.2-21
enrichwith0.3.1equivalence0.7.2
estimability1.4.1ETLUtils1.5
evaluate0.20expint0.1-8
expm0.999-7extraDistr1.9.1
extrafont0.19extrafontdb1.0
fansi1.0.4farver2.1.1
fastICA1.2-3fastmap1.1.1
fastmatch1.1-3fda6.0.5
fdaPDE1.1-11fdrtool1.2.17
fds1.8fdth1.2-6
ff4.0.9ffbase0.13.3
fftwtools0.9-11fields14.1
filehash2.4-5filelock1.0.2
flashClust1.01-2flexmix2.3-19
FNN1.1.3.1fontawesome0.5.0
forcats1.0.0foreach1.5.2
forecast8.21formatR1.14
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fracdiff1.5-2fs1.6.1
fts0.9.9.2functional0.6
furrr0.3.1futile.logger1.4.3
futile.options1.0.1future1.32.0
future.apply1.10.0gam1.22-1
gamlss5.4-12gamlss.data6.0-2
gamlss.dist6.0-5gargle1.3.0
gclus1.3.2gdata2.18.0.1
geepack1.3.9genalg0.2.1
generics0.1.3genetics1.3.8.1.3
GenomeInfoDb1.34.9GenomeInfoDbData1.2.9
GenomicRanges1.50.2GEOquery2.66.0
geosphere1.5-18gert1.9.2
ggalt0.4.0ggdendro0.1.23
ggforce0.4.1ggformula0.10.2
ggfun0.0.9ggmap3.0.2
ggplot23.4.1ggplotify0.1.0
ggrepel0.9.3ggridges0.5.4
ggstance0.3.6ggtree3.6.2
ggvis0.4.8gh1.4.0
git2r0.31.0gitcreds0.1.2
glassoFast1.0gld2.6.6
glmnet4.1-6globals0.16.2
glue1.6.2gmm1.7
gmodels2.18.1.1gmp0.7-1
GO.db3.16.0goftest1.2-3
googledrive2.0.0googlesheets41.0.1
googleVis0.7.1gower1.0.1
GPArotation2022.10-2gpclib1.5-6
GPfit1.0-8gplots3.1.3
gradethis0.2.11.9000graph1.76.0
gridBase0.4-7gridExtra2.3
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grImport0.9-7grImport20.2-0
gsubfn0.7gt0.8.0
gtable0.3.2gtools3.9.4
HaploSim1.8.4.2hardhat1.2.0
haven2.5.2hdrcde3.4
hexbin1.28.2hflights0.1
HH3.1-49highlight0.5.1
highr0.10Hmisc5.0-1
hms1.1.2htmlTable2.4.1
htmltools0.5.4htmlwidgets1.6.2
httpcode0.3.0httpuv1.6.9
httr1.4.5httr20.2.2
HydroMe2.0-1HyperbolicDist0.6-4
hypergeo1.2-13ICC2.4.0
Icens1.70.0ids1.0.1
igraph1.4.1igraphdata1.0.1
illuminaio0.40.0impute1.72.3
ineq0.2-13infer1.0.4
influenceR0.1.0.1ini0.3.1
inline0.3.19insight0.19.0
interp1.1-3intervals0.15.2
introgress1.2.3inum1.0-5
ipred0.9-14IRanges2.32.0
irlba2.3.5.1Iso0.0-18.1
isoband0.2.7iterators1.0.14
itertools0.1-3janitor2.2.0
jpeg0.1-10jquerylib0.1.4
jsonlite1.8.4juicyjuice0.1.0
KEGGREST1.38.0kernelFactory0.3.0
kernlab0.9-32klaR1.7-1
knitr1.42ks1.14.0
labeling0.4.2labelled2.10.0
LaF0.8.4Lahman10.0-1
lambda.r1.2.4lars1.3
later1.3.0latticeExtra0.6-30
lava1.7.2.1lavaan0.6-15
lavaan.survey1.1.3.1lazyeval0.2.2
lcda0.3.1leaflet2.1.2
leaflet.providers1.9.0leaps3.1
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lgr0.4.4lhs1.1.6
libcoin1.0-9lifecycle1.0.3
LIM1.4.7limma3.54.2
limSolve1.5.6lisrelToR0.1.5
listenv0.9.0lme41.1-32
lmom2.9lmtest0.9-40
locfit1.5-9.7lokern1.1-10
loo2.5.1lpSolve5.6.18
lubridate1.9.2luz0.3.1
magic1.6-1magrittr2.0.3
manipulateWidget0.11.1mapproj1.2.11
maps3.4.1maptools1.1-6
markdown1.5MassSpecWavelet1.64.1
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mathjaxr1.6-0matrixcalc1.0-6
MatrixModels0.5-1matrixStats0.63.0
maxLik1.5-2mboost2.9-7
mclust6.0.0mcmc0.9-7
MCMCglmm2.34MEIGOR1.31.0
memoise2.0.1MEMSS0.9-3
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mice3.15.0microbenchmark1.4.9
mime0.12miniUI0.1.1.1
minpack.lm1.2-3minqa1.2.5
misc3d0.9-1miscTools0.6-26
mitools2.4mixOmics6.22.0
mlbench2.1-3mlmRev1.0-8
mlogit1.1-1mlr30.15.0
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modelr0.1.10modeltime1.2.5
modeltools0.2-23moments0.14.1
mondate0.10.02mosaic1.8.4.2
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multicool0.1-12multtest2.54.0
munsell0.5.0mvMORPH1.1.7
mvtnorm1.1-3natserv1.0.0
network1.18.1networkD30.4
NISTnls0.9-13nleqslv3.3.4
nloptr2.0.3nls20.3-3
nlstools2.0-0nnls1.4
nortest1.0-4np0.60-17
numbers0.8-5numDeriv2016.8-1.1
odbc1.3.4openssl2.0.6
openxlsx4.2.5.2optextras2019-12.4
optimParallel1.0-2ordinal2022.11-16
padr0.6.2PairedData1.1.1
palmerpenguins0.1.1paradox0.11.1
parallelly1.34.0parsnip1.0.4
partitions1.10-7party1.3-13
partykit1.2-18pastecs1.3.21
patchwork1.1.2pbapply1.7-0
pbivnorm0.6.0pbkrtest0.5.2
pbmcapply1.5.1PBSmapping2.73.2
pcaMethods1.90.0pcaPP2.0-3
pedigree1.4.2PerformanceAnalytics2.0.4
permute0.9-7phangorn2.11.1
phyloseq1.42.0phytools1.5-1
pillar1.8.1pins1.1.0
pixmap0.4-12pkgbuild1.4.0
pkgconfig2.0.3pkgdown2.0.7
pkgload1.3.2PKPDmodels0.3.2
plm2.6-2plogr0.2.0
plot3D1.4plotly4.10.1
plotrix3.8-2pls2.8-1
plyr1.8.8png0.1-8
poLCA1.6.0.1polspline1.1.22
polyclip1.10-4polycor0.8-1
polynom1.4-1posterior1.4.1
prabclus2.3-2pracma2.4.2
praise1.0.0preprocessCore1.60.2
prettyunits1.1.1princurve2.1.6
pROC1.18.0processx3.8.0
prodlim2019.11.13profileModel0.6.1
profvis0.3.7progress1.2.2
progressr0.13.0proj41.0-12
promises1.2.0.1prophet1.0
proto1.0.0proxy0.4-27
PRROC1.3.1ps1.7.2
pscl1.5.5psy1.2
psych2.2.9purrr1.0.1
qap0.1-2qtl1.58
quadprog1.5-8Quandl2.11.0
quantmod0.4.20quantreg5.94
questionr0.7.8QUIC1.1.1
qvalue2.30.0qvcalc1.0.2
R.cache0.16.0R.devices2.17.1
R.filesets2.15.0R.huge0.9.0
R.matlab3.7.0R.methodsS31.8.2
R.oo1.25.0R.rsp0.45.0
R.utils2.12.2R2HTML2.3.3
R2OpenBUGS3.2-3.2.1R2WinBUGS2.1-21
R62.5.1ragg1.2.5
rainbow3.7randomForest4.7-1.1
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raster3.6-20ratelimitr0.4.1
rbenchmark1.0.0RBGL1.74.0
rbibutils2.2.13Rcgmin2022-4.30
rcmdcheck1.4.0RColorBrewer1.1-3
Rcpp1.0.10RcppAnnoy0.0.20
RcppArmadillo0.12.0.1.0RcppEigen0.3.3.9.3
RcppParallel5.1.7RcppProgress0.4.2
RcppRoll0.3.0Rcsdp0.1.57.4
RCurl1.98-1.10Rdpack2.4
reactable0.4.4reactR0.4.4
readr2.1.4readstata130.10.1
readxl1.4.2recipes1.0.5
registry0.5-1regress1.3-21
relaxnet0.3-2reliaR0.01
relimp1.0-5rematch1.0.1
rematch22.1.2remotes2.4.2
rentrez1.2.3renv0.17.1
reprex2.0.2reshape0.8.9
reshape21.4.4rex1.2.1
rgl1.0.1RgoogleMaps1.4.5.3
RGraphics3.0-2Rgraphviz2.42.0
rhdf52.42.0rhdf5filters1.10.0
Rhdf5lib1.20.0riingo0.3.1
ritis1.0.0rJava1.0-6
RJDBC0.2-10rjson0.2.21
RJSONIO1.3-1.8rlang1.1.0
rlecuyer0.3-5rmarkdown2.20
rmeta3.0Rmpfr0.9-1
rms6.5-0RMySQL0.10.25
rncl0.8.7robustbase0.95-0
ROCR1.0-11Rook1.2
rotl3.0.14roxygen27.2.3
RPostgreSQL0.7-5rprojroot2.0.3
rredlist0.7.1rsample1.1.1
Rsolnp1.16RSpectra0.16-1
RSQLite2.3.0rstan2.21.8
rstantools2.3.0rstudioapi0.14
Rttf2pt11.3.12RUnit0.4.32
rversions2.1.2rvest1.0.3
Rvmmin2018-4.17.1s21.1.2
S4Vectors0.36.2sandwich3.0-2
sass0.4.5scales1.2.1
scatterplot3d0.3-43ScottKnott1.3-0
SDMTools1.1-221.2sealasso0.1-3
segmented1.6-2selectr0.4-2
sem3.1-15SemiPar1.0-4.2
semTools0.5-6seqinr4.2-23
seriation1.4.2sessioninfo1.2.2
setRNG2022.4-1sets1.0-24
sf1.0-9sfsmisc1.1-14
shape1.4.6shapefiles0.7.2
shiny1.7.4shiny.semantic0.4.3
shinyjs2.1.0shinystan2.6.0
shinythemes1.2.0SimComp3.3
simsem0.5-16sitmo2.0.2
slam0.1-50slider0.3.0
sn2.1.0sna2.7-1
snakecase0.11.0snow0.4-4
snowfall1.84-6.2solrium1.2.0
sourcetools0.1.7-1sp1.6-0
spam2.9-1SparseM1.81
SpatialExtremes2.1-0spatstat3.0-3
spatstat.data3.0-1spatstat.explore3.1-0
spatstat.geom3.1-0spatstat.linnet3.0-6
spatstat.model3.2-1spatstat.random3.1-4
spatstat.sparse3.0-1spatstat.utils3.0-2
spData2.2.2spdep1.2-8
SQUAREM2021.1ssgraph1.15
stabs0.6-4StanHeaders2.21.0-7
statmod1.5.0statnet.common4.8.0
stringi1.7.12stringr1.5.0
strucchange1.5-3styler1.9.1
subplex1.8superml0.5.6
SuppDists1.1-9.7survcomp1.48.0
survey4.1-1survivalROC1.0.3.1
survPresmooth1.1-11svUnit1.0.6
sybil2.2.0synbreedData1.5
sys3.4.1systemfonts1.0.4
tables0.9.10tabnet0.3.0
taxize0.9.100tensor1.5
tensorA0.36.2terra1.7-18
testit0.13testthat3.1.7
textplot0.2.2textshaping0.3.6
TH.data1.1-1threejs0.3.3
tibble3.2.0tidymodels1.0.0
tidyquant1.0.6tidyr1.3.0
tidyselect1.2.0tidytree0.4.2
tidyverse2.0.0tiff0.1-11
timechange0.2.0timeDate4022.108
timeSeries4021.105timetk2.8.2
tinytex0.44tis1.39
tkrplot0.0-27tmvtnorm1.5
topicmodels.etm0.1.0torch0.9.1
torchaudio0.3.1.9000torchdatasets0.3.0
torchvision0.5.0treeio1.22.0
triebeard0.4.1trimcluster0.1-5
tripack1.3-9.1truncnorm1.0-8
truncreg0.2-5tseries0.10-53
tsfeatures1.1TSP1.2-3
TTR0.24.3tune1.0.1
tweenr2.0.2tzdb0.3.0
ucminf1.1-4.1udpipe0.8.11
units0.8-1urca1.3-3
urlchecker1.0.1urltools1.7.3
usethis2.1.6utf81.2.3
uuid1.1-0uwot0.1.14
V84.2.2vcd1.4-11
vctrs0.6.0vegan2.6-4
VGAM1.1-8VGAMdata1.1-8
viridis0.6.2viridisLite0.4.1
visNetwork2.1.2vroom1.6.1
waldo0.4.0warp0.2.0
waveslim1.8.4wavethresh4.7.2
webshot0.5.4whisker0.4.1
widenet0.1-2WikidataQueryServiceR1.0.0
WikidataR2.3.3WikipediR1.5.0
wikitaxa0.4.0withr2.5.0
wk0.7.2word2vec0.3.4
workflows1.1.3workflowsets1.0.0
worrms0.4.2xfun0.37
xgboost1.7.3.1XLConnect1.0.7
xlsx0.6.5xlsxjars0.6.1
XML3.99-0.13xml21.3.3
xopen1.0.0xtable1.8-4
xts0.13.0XVector0.38.0
yaml2.3.7yardstick1.1.0
yulab.utils0.0.6zeallot0.1.0
zip2.2.2zlibbioc1.44.0
zoo1.8-11

RStudio Server

R: 4.2.3

rstudio-server: 2022.12.0-353

CUDA Version: 12.0

GPU Driver Version: 525.85.12

Release Notes

Applied system patches.

Enabled automatic compression and extraction for exporting and uploading.

Removed the file size limit for uploads, allowing users to upload larger files.

R packages

packageversionpackageversion
abc2.2.1abc.data1.0
abind1.4-5ACD1.5.3
acepack1.4.1actuar3.3-2
ada2.0-5ade41.7-22
ade4TkGUI0.3-1adegraphics1.0-18
adehabitatLT0.3.26adehabitatMA0.3.15
admisc0.31affxparser1.70.0
affy1.76.0affyio1.68.0
agricolae1.3-5akima0.6-3.4
AlgDesign1.2.1alphavantager0.1.2
Amelia1.8.1AnnotationDbi1.60.2
anytime0.3.9ape5.7-1
aplot0.1.10arm1.13-1
aroma.apd0.6.1ascii2.4
ash1.0-15askpass1.1
assertthat0.2.1AUC0.3.2
av0.8.3backports1.4.1
base642.0.1base64enc0.1-3
baseballr1.3.0bayesplot1.10.0
BB2019.10-1BDgraph2.72
bdsmatrix1.3-6beadarray2.48.0
BeadDataPackR1.50.0BGLR1.1.0
BH1.81.0-1biganalytics1.1.21
bigD0.2.0biglars1.0.2
biglm0.9-2.1bigmemory4.6.1
bigmemory.sri0.1.6bigml0.1.2
bindr0.1.1bindrcpp0.2.2
Biobase2.58.0BiocGenerics0.44.0
BiocManager1.30.20BiocParallel1.32.5
BiocVersion3.16.0biomformat1.26.0
Biostrings2.66.0bit4.0.5
bit644.0.5bitops1.0-7
blob1.2.4BLR1.6
bold1.2.0bootstrap2019.6
bpca1.3-4BradleyTerry21.1-2
brew1.0-8brglm0.7.2
brglm20.9bridgesampling1.1-2
brio1.1.3brms2.19.0
Brobdingnag1.2-9broom1.0.4
bslib0.4.2BsMD2020.4.30
ca0.71.1cachem1.0.7
calibrator1.2-8callr3.7.3
car3.1-1carData3.0-5
caret6.0-93caTools1.18.2
CellNOptR1.44.0cellranger1.1.0
checkmate2.1.0chron2.3-60
CircStats0.2-6classInt0.4-9
cli3.6.0clipr0.8.0
clock0.6.1clusterGeneration1.3.7
CNORode1.40.0coda0.19-4
coin1.4-2collapse1.9.3
colorspace2.1-0colourpicker1.2.0
combinat0.0-8commonmark1.9.0
conditionz0.1.0conf.design2.0.0
conflicted1.2.0contfrac1.1-12
coro1.0.3corpcor1.6.10
corrgram1.14corrplot0.92
cpp110.4.3crayon1.5.2
credentials1.3.2crosstalk1.2.0
crul1.3ctv0.9-4
cubature2.0.4.6curl5.0.0
CVST0.2-3d3Network0.5.2.1
DAAG1.25.4data.table1.14.8
DataExplorer0.8.2datapasta3.1.0
DBI1.1.3dbplyr2.3.1
deldir1.0-6dendextend1.16.0
DEoptimR1.0-11Deriv4.1.3
desc1.4.2deSolve1.35
devtools2.4.5dfidx0.0-5
dfoptim2020.10-1diagram1.6.5
DiagrammeR1.0.9dials1.1.0
DiceDesign1.9dichromat2.0-0.1
diffobj0.3.5digest0.6.31
dimRed0.2.6diptest0.76-0
discretization1.0-1.1distributional0.3.1
doBy4.6.16doc2vec0.2.0
DoE.base1.2-1doMC1.3.8
doParallel1.0.17dotCall641.0-2
downlit0.4.2downloader0.4
dplyr1.1.0dqrng0.3.0
DRR0.0.4DT0.27
dtplyr1.3.0dummies1.5.6
dygraphs1.1.1.6dynamicTreeCut1.63-1
e10711.7-13EbayesThresh1.4-12
EBImage4.40.0effects4.2-2
ellipse0.4.3ellipsis0.3.2
elliptic1.4-0emulator1.2-21
enrichwith0.3.1equivalence0.7.2
estimability1.4.1ETLUtils1.5
evaluate0.20expint0.1-8
expm0.999-7extraDistr1.9.1
extrafont0.19extrafontdb1.0
fansi1.0.4farver2.1.1
fastICA1.2-3fastmap1.1.1
fastmatch1.1-3fda6.0.5
fdaPDE1.1-11fdrtool1.2.17
fds1.8fdth1.2-6
ff4.0.9ffbase0.13.3
fftwtools0.9-11fields14.1
filehash2.4-5filelock1.0.2
flashClust1.01-2flexmix2.3-19
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sf1.0-9sfsmisc1.1-14
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yaml2.3.7yardstick1.1.0
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zip2.2.2zlibbioc1.44.0
zoo1.8-11

RStudio Server

R: 4.2.3

rstudio-server: 2022.12.0-353

CUDA Version: 12.0

GPU Driver Version: 525.85.12

R packages

packageversionpackageversion
abc2.2.1abc.data1.0
abind1.4-5ACD1.5.3
acepack1.4.1actuar3.3-2
ada2.0-5ade41.7-22
ade4TkGUI0.3-1adegraphics1.0-18
adehabitatLT0.3.26adehabitatMA0.3.15
admisc0.31affxparser1.70.0
affy1.76.0affyio1.68.0
agricolae1.3-5akima0.6-3.4
AlgDesign1.2.1alphavantager0.1.2
Amelia1.8.1AnnotationDbi1.60.2
anytime0.3.9ape5.7-1
aplot0.1.10arm1.13-1
aroma.apd0.6.1ascii2.4
ash1.0-15askpass1.1
assertthat0.2.1AUC0.3.2
av0.8.3backports1.4.1
base642.0.1base64enc0.1-3
baseballr1.3.0bayesplot1.10.0
BB2019.10-1BDgraph2.72
bdsmatrix1.3-6beadarray2.48.0
BeadDataPackR1.50.0BGLR1.1.0
BH1.81.0-1biganalytics1.1.21
bigD0.2.0biglars1.0.2
biglm0.9-2.1bigmemory4.6.1
bigmemory.sri0.1.6bigml0.1.2
bindr0.1.1bindrcpp0.2.2
Biobase2.58.0BiocGenerics0.44.0
BiocManager1.30.20BiocParallel1.32.5
BiocVersion3.16.0biomformat1.26.0
Biostrings2.66.0bit4.0.5
bit644.0.5bitops1.0-7
blob1.2.4BLR1.6
bold1.2.0bootstrap2019.6
bpca1.3-4BradleyTerry21.1-2
brew1.0-8brglm0.7.2
brglm20.9bridgesampling1.1-2
brio1.1.3brms2.19.0
Brobdingnag1.2-9broom1.0.4
bslib0.4.2BsMD2020.4.30
ca0.71.1cachem1.0.7
calibrator1.2-8callr3.7.3
car3.1-1carData3.0-5
caret6.0-93caTools1.18.2
CellNOptR1.44.0cellranger1.1.0
checkmate2.1.0chron2.3-60
CircStats0.2-6classInt0.4-9
cli3.6.0clipr0.8.0
clock0.6.1clusterGeneration1.3.7
CNORode1.40.0coda0.19-4
coin1.4-2collapse1.9.3
colorspace2.1-0colourpicker1.2.0
combinat0.0-8commonmark1.9.0
conditionz0.1.0conf.design2.0.0
conflicted1.2.0contfrac1.1-12
coro1.0.3corpcor1.6.10
corrgram1.14corrplot0.92
cpp110.4.3crayon1.5.2
credentials1.3.2crosstalk1.2.0
crul1.3ctv0.9-4
cubature2.0.4.6curl5.0.0
CVST0.2-3d3Network0.5.2.1
DAAG1.25.4data.table1.14.8
DataExplorer0.8.2datapasta3.1.0
DBI1.1.3dbplyr2.3.1
deldir1.0-6dendextend1.16.0
DEoptimR1.0-11Deriv4.1.3
desc1.4.2deSolve1.35
devtools2.4.5dfidx0.0-5
dfoptim2020.10-1diagram1.6.5
DiagrammeR1.0.9dials1.1.0
DiceDesign1.9dichromat2.0-0.1
diffobj0.3.5digest0.6.31
dimRed0.2.6diptest0.76-0
discretization1.0-1.1distributional0.3.1
doBy4.6.16doc2vec0.2.0
DoE.base1.2-1doMC1.3.8
doParallel1.0.17dotCall641.0-2
downlit0.4.2downloader0.4
dplyr1.1.0dqrng0.3.0
DRR0.0.4DT0.27
dtplyr1.3.0dummies1.5.6
dygraphs1.1.1.6dynamicTreeCut1.63-1
e10711.7-13EbayesThresh1.4-12
EBImage4.40.0effects4.2-2
ellipse0.4.3ellipsis0.3.2
elliptic1.4-0emulator1.2-21
enrichwith0.3.1equivalence0.7.2
estimability1.4.1ETLUtils1.5
evaluate0.20expint0.1-8
expm0.999-7extraDistr1.9.1
extrafont0.19extrafontdb1.0
fansi1.0.4farver2.1.1
fastICA1.2-3fastmap1.1.1
fastmatch1.1-3fda6.0.5
fdaPDE1.1-11fdrtool1.2.17
fds1.8fdth1.2-6
ff4.0.9ffbase0.13.3
fftwtools0.9-11fields14.1
filehash2.4-5filelock1.0.2
flashClust1.01-2flexmix2.3-19
FNN1.1.3.1fontawesome0.5.0
forcats1.0.0foreach1.5.2
forecast8.21formatR1.14
Formula1.2-5fpc2.2-10
fracdiff1.5-2fs1.6.1
fts0.9.9.2functional0.6
furrr0.3.1futile.logger1.4.3
futile.options1.0.1future1.32.0
future.apply1.10.0gam1.22-1
gamlss5.4-12gamlss.data6.0-2
gamlss.dist6.0-5gargle1.3.0
gclus1.3.2gdata2.18.0.1
geepack1.3.9genalg0.2.1
generics0.1.3genetics1.3.8.1.3
GenomeInfoDb1.34.9GenomeInfoDbData1.2.9
GenomicRanges1.50.2GEOquery2.66.0
geosphere1.5-18gert1.9.2
ggalt0.4.0ggdendro0.1.23
ggforce0.4.1ggformula0.10.2
ggfun0.0.9ggmap3.0.2
ggplot23.4.1ggplotify0.1.0
ggrepel0.9.3ggridges0.5.4
ggstance0.3.6ggtree3.6.2
ggvis0.4.8gh1.4.0
git2r0.31.0gitcreds0.1.2
glassoFast1.0gld2.6.6
glmnet4.1-6globals0.16.2
glue1.6.2gmm1.7
gmodels2.18.1.1gmp0.7-1
GO.db3.16.0goftest1.2-3
googledrive2.0.0googlesheets41.0.1
googleVis0.7.1gower1.0.1
GPArotation2022.10-2gpclib1.5-6
GPfit1.0-8gplots3.1.3
gradethis0.2.11.9000graph1.76.0
gridBase0.4-7gridExtra2.3
gridGraphics0.5-1gridSVG1.7-5
grImport0.9-7grImport20.2-0
gsubfn0.7gt0.8.0
gtable0.3.2gtools3.9.4
HaploSim1.8.4.2hardhat1.2.0
haven2.5.2hdrcde3.4
hexbin1.28.2hflights0.1
HH3.1-49highlight0.5.1
highr0.10Hmisc5.0-1
hms1.1.2htmlTable2.4.1
htmltools0.5.4htmlwidgets1.6.2
httpcode0.3.0httpuv1.6.9
httr1.4.5httr20.2.2
HydroMe2.0-1HyperbolicDist0.6-4
hypergeo1.2-13ICC2.4.0
Icens1.70.0ids1.0.1
igraph1.4.1igraphdata1.0.1
illuminaio0.40.0impute1.72.3
ineq0.2-13infer1.0.4
influenceR0.1.0.1ini0.3.1
inline0.3.19insight0.19.0
interp1.1-3intervals0.15.2
introgress1.2.3inum1.0-5
ipred0.9-14IRanges2.32.0
irlba2.3.5.1Iso0.0-18.1
isoband0.2.7iterators1.0.14
itertools0.1-3janitor2.2.0
jpeg0.1-10jquerylib0.1.4
jsonlite1.8.4juicyjuice0.1.0
KEGGREST1.38.0kernelFactory0.3.0
kernlab0.9-32klaR1.7-1
knitr1.42ks1.14.0
labeling0.4.2labelled2.10.0
LaF0.8.4Lahman10.0-1
lambda.r1.2.4lars1.3
later1.3.0latticeExtra0.6-30
lava1.7.2.1lavaan0.6-15
lavaan.survey1.1.3.1lazyeval0.2.2
lcda0.3.1leaflet2.1.2
leaflet.providers1.9.0leaps3.1
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ROCR1.0-11Rook1.2
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sem3.1-15SemiPar1.0-4.2
semTools0.5-6seqinr4.2-23
seriation1.4.2sessioninfo1.2.2
setRNG2022.4-1sets1.0-24
sf1.0-9sfsmisc1.1-14
shape1.4.6shapefiles0.7.2
shiny1.7.4shiny.semantic0.4.3
shinyjs2.1.0shinystan2.6.0
shinythemes1.2.0SimComp3.3
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sn2.1.0sna2.7-1
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stringi1.7.12stringr1.5.0
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tweenr2.0.2tzdb0.3.0
ucminf1.1-4.1udpipe0.8.11
units0.8-1urca1.3-3
urlchecker1.0.1urltools1.7.3
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uuid1.1-0uwot0.1.14
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wikitaxa0.4.0withr2.5.0
wk0.7.2word2vec0.3.4
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zip2.2.2zlibbioc1.44.0
zoo1.8-11

RStudio Server

R: 4.2.2

rstudio-server: 2022.12.0-353

CUDA Version: 12.0

GPU Driver Version: 525.85.12

R packages

packageversionpackageversion
abc2.2.1abc.data1.0
abind1.4-5ACD1.5.3
acepack1.4.1actuar3.3-1
ada2.0-5ade41.7-20
ade4TkGUI0.3-1adegraphics1.0-17
adehabitatLT0.3.26adehabitatMA0.3.15
admisc0.30affxparser1.70.0
agricolae1.3-5akima0.6-3.4
AlgDesign1.2.1alphavantager0.1.2
Amelia1.8.1anytime0.3.9
ape5.6-2arm1.13-1
aroma.apd0.6.1ascii2.4
ash1.0-15askpass1.1
assertthat0.2.1AUC0.3.2
backports1.4.1base64enc0.1-3
bayesplot1.10.0BB2019.10-1
BDgraph2.72bdsmatrix1.3-6
BGLR1.1.0BH1.81.0-1
biganalytics1.1.21bigD0.2.0
biglars1.0.2biglm0.9-2.1
bigmemory4.6.1bigmemory.sri0.1.6
bigml0.1.2bindr0.1.1
bindrcpp0.2.2bit4.0.5
bit644.0.5bitops1.0-7
blob1.2.3BLR1.6
bold1.2.0bpca1.3-4
BradleyTerry21.1-2brew1.0-8
brglm0.7.2brglm20.8.2
bridgesampling1.1-2brio1.1.3
brms2.18.0Brobdingnag1.2-9
broom1.0.3bslib0.4.2
BsMD2020.4.30ca0.71.1
cachem1.0.6calibrator1.2-8
callr3.7.3car3.1-1
carData3.0-5caret6.0-93
caTools1.18.2cellranger1.1.0
checkmate2.1.0chron2.3-59
CircStats0.2-6classInt0.4-8
cli3.6.0clipr0.8.0
clock0.6.1clusterGeneration1.3.7
coda0.19-4coin1.4-2
collapse1.9.2colorspace2.1-0
colourpicker1.2.0combinat0.0-8
commonmark1.8.1conditionz0.1.0
conf.design2.0.0conflicted1.2.0
contfrac1.1-12coro1.0.3
corpcor1.6.10corrgram1.14
corrplot0.92cpp110.4.3
crayon1.5.2credentials1.3.2
crosstalk1.2.0crul1.3
cubature2.0.4.6curl5.0.0
CVST0.2-3d3Network0.5.2.1
DAAG1.25.4data.table1.14.6
DataExplorer0.8.2datapasta3.1.0
DBI1.1.3dbplyr2.3.0
deldir1.0-6dendextend1.16.0
DEoptimR1.0-11Deriv4.1.3
desc1.4.2deSolve1.34
devtools2.4.5dfidx0.0-5
dfoptim2020.10-1diagram1.6.5
DiagrammeR1.0.9dials1.1.0
DiceDesign1.9dichromat2.0-0.1
diffobj0.3.5digest0.6.31
dimRed0.2.6diptest0.76-0
discretization1.0-1.1distributional0.3.1
doBy4.6.16doc2vec0.2.0
DoE.base1.2-1doMC1.3.8
doParallel1.0.17dotCall641.0-2
downlit0.4.2downloader0.4
dplyr1.1.0dqrng0.3.0
DRR0.0.4DT0.27
dtplyr1.2.2dummies1.5.6
dygraphs1.1.1.6dynamicTreeCut1.63-1
e10711.7-13EbayesThresh1.4-12
effects4.2-2ellipse0.4.3
ellipsis0.3.2elliptic1.4-0
emulator1.2-21enrichwith0.3.1
equivalence0.7.2estimability1.4.1
ETLUtils1.5evaluate0.20
expint0.1-8expm0.999-7
extraDistr1.9.1extrafont0.19
extrafontdb1.0fansi1.0.4
farver2.1.1fastICA1.2-3
fastmap1.1.0fastmatch1.1-3
fda6.0.5fdrtool1.2.17
fds1.8fdth1.2-6
ff4.0.9ffbase0.13.3
fields14.1filehash2.4-3
filelock1.0.2flashClust1.01-2
flexmix2.3-18FNN1.1.3.1
fontawesome0.5.0forcats1.0.0
foreach1.5.2forecast8.20
formatR1.14Formula1.2-4
fpc2.2-10fracdiff1.5-2
fs1.6.0fts0.9.9.2
functional0.6furrr0.3.1
future1.31.0future.apply1.10.0
gam1.22-1gamlss5.4-12
gamlss.data6.0-2gamlss.dist6.0-5
gargle1.3.0gclus1.3.2
gdata2.18.0.1geepack1.3.9
genalg0.2.1generics0.1.3
genetics1.3.8.1.3geosphere1.5-18
gert1.9.2ggalt0.4.0
ggdendro0.1.23ggforce0.4.1
ggformula0.10.2ggmap3.0.1
ggplot23.4.0ggrepel0.9.3
ggridges0.5.4ggstance0.3.6
ggvis0.4.7gh1.3.1
git2r0.31.0gitcreds0.1.2
glassoFast1.0gld2.6.6
glmnet4.1-6globals0.16.2
glue1.6.2gmm1.7
gmodels2.18.1.1gmp0.6-10
goftest1.2-3googledrive2.0.0
googlesheets41.0.1googleVis0.7.0
gower1.0.1GPArotation2022.10-2
gpclib1.5-6GPfit1.0-8
gplots3.1.3gradethis0.2.11.9000
gridBase0.4-7gridExtra2.3
gridGraphics0.5-1gridSVG1.7-4
grImport0.9-5grImport20.2-0
gsubfn0.7gt0.8.0
gtable0.3.1gtools3.9.4
HaploSim1.8.4.2hardhat1.2.0
haven2.5.1hdrcde3.4
hexbin1.28.2hflights0.1
HH3.1-49highlight0.5.1
highr0.10Hmisc4.7-2
hms1.1.2htmlTable2.4.1
htmltools0.5.4htmlwidgets1.6.1
httpcode0.3.0httpuv1.6.8
httr1.4.4HydroMe2.0-1
HyperbolicDist0.6-4hypergeo1.2-13
ICC2.4.0ids1.0.1
igraph1.3.5igraphdata1.0.1
ineq0.2-13infer1.0.4
influenceR0.1.0.1ini0.3.1
inline0.3.19insight0.19.0
interp1.1-3intervals0.15.2
introgress1.2.3inum1.0-4
ipred0.9-13irlba2.3.5.1
Iso0.0-18.1isoband0.2.7
iterators1.0.14itertools0.1-3
janitor2.2.0jpeg0.1-10
jquerylib0.1.4jsonlite1.8.4
juicyjuice0.1.0kernelFactory0.3.0
kernlab0.9-32klaR1.7-1
knitr1.42ks1.14.0
labeling0.4.2labelled2.10.0
LaF0.8.4Lahman10.0-1
lars1.3later1.3.0
latticeExtra0.6-30lava1.7.1
lavaan0.6-13lavaan.survey1.1.3.1
lazyeval0.2.2lcda0.3.1
leaflet2.1.1leaflet.providers1.9.0
leaps3.1LearnBayes2.15.1
learnr0.11.2.9000lgr0.4.4
lhs1.1.6libcoin1.0-9
lifecycle1.0.3LIM1.4.7
limSolve1.5.6lisrelToR0.1.5
listenv0.9.0lme41.1-31
lmom2.9lmtest0.9-40
locfit1.5-9.7lokern1.1-9
loo2.5.1lpSolve5.6.18
lubridate1.9.1luz0.3.1
magic1.6-1magrittr2.0.3
manipulateWidget0.11.1mapproj1.2.11
maps3.4.1maptools1.1-6
markdown1.5Matching4.10-8
MatchIt4.5.0mathjaxr1.6-0
matrixcalc1.0-6MatrixModels0.5-1
matrixStats0.63.0maxLik1.5-2
mboost2.9-7mclust6.0.0
mcmc0.9-7MCMCglmm2.34
memoise2.0.1MEMSS0.9-3
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mice3.15.0microbenchmark1.4.9
mime0.12miniUI0.1.1.1
minpack.lm1.2-3minqa1.2.5
misc3d0.9-1miscTools0.6-26
mitools2.4mlbench2.1-3
mlmRev1.0-8mlogit1.1-1
mlr30.14.1mlr3measures0.5.0
mlr3misc0.11.0mnormt2.1.1
modeldata1.1.0modelenv0.1.0
ModelMetrics1.2.2.2modelr0.1.10
modeltime1.2.4modeltools0.2-23
moments0.14.1mondate0.10.02
mosaic1.8.4.2mosaicCore0.9.2.1
mosaicData0.20.3mratios1.4.2
multcomp1.4-20multicool0.1-12
munsell0.5.0mvMORPH1.1.6
mvtnorm1.1-3natserv1.0.0
network1.18.1networkD30.4
NISTnls0.9-13nleqslv3.3.4
nloptr2.0.3nls20.3-3
nlstools2.0-0nnls1.4
nortest1.0-4np0.60-16
numbers0.8-5numDeriv2016.8-1.1
odbc1.3.4openssl2.0.5
openxlsx4.2.5.1optextras2019-12.4
optimParallel1.0-2ordinal2022.11-16
padr0.6.2PairedData1.1.1
palmerpenguins0.1.1paradox0.11.0
parallelly1.34.0parsnip1.0.3
partitions1.10-7party1.3-11
partykit1.2-16pastecs1.3.21
patchwork1.1.2pbapply1.7-0
pbivnorm0.6.0pbkrtest0.5.2
pbmcapply1.5.1PBSmapping2.73.2
pcaPP2.0-3pedigree1.4.2
PerformanceAnalytics2.0.4permute0.9-7
phangorn2.11.1phytools1.2-0
pillar1.8.1pins1.1.0
pixmap0.4-12pkgbuild1.4.0
pkgconfig2.0.3pkgdown2.0.7
pkgload1.3.2PKPDmodels0.3.2
plm2.6-2plogr0.2.0
plot3D1.4plotly4.10.1
plotrix3.8-2pls2.8-1
plyr1.8.8png0.1-8
poLCA1.6.0.1polspline1.1.22
polyclip1.10-4polycor0.8-1
polynom1.4-1posterior1.3.1
prabclus2.3-2pracma2.4.2
praise1.0.0prettyunits1.1.1
princurve2.1.6pROC1.18.0
processx3.8.0prodlim2019.11.13
profileModel0.6.1profvis0.3.7
progress1.2.2progressr0.13.0
proj41.0-12promises1.2.0.1
prophet1.0proto1.0.0
proxy0.4-27PRROC1.3.1
ps1.7.2pscl1.5.5
psy1.2psych2.2.9
purrr1.0.1qap0.1-2
qtl1.58quadprog1.5-8
Quandl2.11.0quantmod0.4.20
quantreg5.94questionr0.7.8
QUIC1.1.1qvcalc1.0.2
R.cache0.16.0R.devices2.17.1
R.filesets2.15.0R.huge0.9.0
R.matlab3.7.0R.methodsS31.8.2
R.oo1.25.0R.rsp0.45.0
R.utils2.12.2R2HTML2.3.3
R2OpenBUGS3.2-3.2.1R2WinBUGS2.1-21
R62.5.1ragg1.2.5
rainbow3.7randomForest4.7-1.1
rappdirs0.3.3raster3.6-14
ratelimitr0.4.1rbenchmark1.0.0
rbibutils2.2.13Rcgmin2022-4.30
rcmdcheck1.4.0RColorBrewer1.1-3
Rcpp1.0.10RcppAnnoy0.0.20
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RCurl1.98-1.10Rdpack2.4
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Rook1.2rotl3.0.14
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rstan2.21.8rstantools2.2.0
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rvest1.0.3Rvmmin2018-4.17.1
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sem3.1-15SemiPar1.0-4.2
semTools0.5-6seqinr4.2-23
seriation1.4.1sessioninfo1.2.2
setRNG2022.4-1sets1.0-22
sf1.0-9sfsmisc1.1-14
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tweenr2.0.2tzdb0.3.0
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xlsx0.6.5xlsxjars0.6.1
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zip2.2.2zoo1.8-11

RStudio Server

R: 4.2.2

rstudio-server: 2022.12.0-353

CUDA Version: 12.0

GPU Driver Version: 525.85.12

R packages

packageversionpackageversion
abc2.2.1abc.data1.0
abind1.4-5ACD1.5.3
acepack1.4.1actuar3.3-1
ada2.0-5ade41.7-20
ade4TkGUI0.3-1adegraphics1.0-17
adehabitatLT0.3.26adehabitatMA0.3.15
admisc0.30affxparser1.70.0
agricolae1.3-5akima0.6-3.4
AlgDesign1.2.1alphavantager0.1.2
Amelia1.8.1anytime0.3.9
ape5.6-2arm1.13-1
aroma.apd0.6.1ascii2.4
ash1.0-15askpass1.1
assertthat0.2.1AUC0.3.2
backports1.4.1base64enc0.1-3
bayesplot1.10.0BB2019.10-1
BDgraph2.72bdsmatrix1.3-6
BGLR1.1.0BH1.81.0-1
biganalytics1.1.21bigD0.2.0
biglars1.0.2biglm0.9-2.1
bigmemory4.6.1bigmemory.sri0.1.6
bigml0.1.2bindr0.1.1
bindrcpp0.2.2bit4.0.5
bit644.0.5bitops1.0-7
blob1.2.3BLR1.6
bold1.2.0bpca1.3-4
BradleyTerry21.1-2brew1.0-8
brglm0.7.2brglm20.8.2
bridgesampling1.1-2brio1.1.3
brms2.18.0Brobdingnag1.2-9
broom1.0.3bslib0.4.2
BsMD2020.4.30ca0.71.1
cachem1.0.6calibrator1.2-8
callr3.7.3car3.1-1
carData3.0-5caret6.0-93
caTools1.18.2cellranger1.1.0
checkmate2.1.0chron2.3-59
CircStats0.2-6classInt0.4-8
cli3.6.0clipr0.8.0
clock0.6.1clusterGeneration1.3.7
coda0.19-4coin1.4-2
collapse1.9.2colorspace2.1-0
colourpicker1.2.0combinat0.0-8
commonmark1.8.1conditionz0.1.0
conf.design2.0.0conflicted1.2.0
contfrac1.1-12coro1.0.3
corpcor1.6.10corrgram1.14
corrplot0.92cpp110.4.3
crayon1.5.2credentials1.3.2
crosstalk1.2.0crul1.3
cubature2.0.4.6curl5.0.0
CVST0.2-3d3Network0.5.2.1
DAAG1.25.4data.table1.14.6
DataExplorer0.8.2datapasta3.1.0
DBI1.1.3dbplyr2.3.0
deldir1.0-6dendextend1.16.0
DEoptimR1.0-11Deriv4.1.3
desc1.4.2deSolve1.34
devtools2.4.5dfidx0.0-5
dfoptim2020.10-1diagram1.6.5
DiagrammeR1.0.9dials1.1.0
DiceDesign1.9dichromat2.0-0.1
diffobj0.3.5digest0.6.31
dimRed0.2.6diptest0.76-0
discretization1.0-1.1distributional0.3.1
doBy4.6.16doc2vec0.2.0
DoE.base1.2-1doMC1.3.8
doParallel1.0.17dotCall641.0-2
downlit0.4.2downloader0.4
dplyr1.1.0dqrng0.3.0
DRR0.0.4DT0.27
dtplyr1.2.2dummies1.5.6
dygraphs1.1.1.6dynamicTreeCut1.63-1
e10711.7-13EbayesThresh1.4-12
effects4.2-2ellipse0.4.3
ellipsis0.3.2elliptic1.4-0
emulator1.2-21enrichwith0.3.1
equivalence0.7.2estimability1.4.1
ETLUtils1.5evaluate0.20
expint0.1-8expm0.999-7
extraDistr1.9.1extrafont0.19
extrafontdb1.0fansi1.0.4
farver2.1.1fastICA1.2-3
fastmap1.1.0fastmatch1.1-3
fda6.0.5fdrtool1.2.17
fds1.8fdth1.2-6
ff4.0.9ffbase0.13.3
fields14.1filehash2.4-3
filelock1.0.2flashClust1.01-2
flexmix2.3-18FNN1.1.3.1
fontawesome0.5.0forcats1.0.0
foreach1.5.2forecast8.20
formatR1.14Formula1.2-4
fpc2.2-10fracdiff1.5-2
fs1.6.0fts0.9.9.2
functional0.6furrr0.3.1
future1.31.0future.apply1.10.0
gam1.22-1gamlss5.4-12
gamlss.data6.0-2gamlss.dist6.0-5
gargle1.3.0gclus1.3.2
gdata2.18.0.1geepack1.3.9
genalg0.2.1generics0.1.3
genetics1.3.8.1.3geosphere1.5-18
gert1.9.2ggalt0.4.0
ggdendro0.1.23ggforce0.4.1
ggformula0.10.2ggmap3.0.1
ggplot23.4.0ggrepel0.9.3
ggridges0.5.4ggstance0.3.6
ggvis0.4.7gh1.3.1
git2r0.31.0gitcreds0.1.2
glassoFast1.0gld2.6.6
glmnet4.1-6globals0.16.2
glue1.6.2gmm1.7
gmodels2.18.1.1gmp0.6-10
goftest1.2-3googledrive2.0.0
googlesheets41.0.1googleVis0.7.0
gower1.0.1GPArotation2022.10-2
gpclib1.5-6GPfit1.0-8
gplots3.1.3gradethis0.2.11.9000
gridBase0.4-7gridExtra2.3
gridGraphics0.5-1gridSVG1.7-4
grImport0.9-5grImport20.2-0
gsubfn0.7gt0.8.0
gtable0.3.1gtools3.9.4
HaploSim1.8.4.2hardhat1.2.0
haven2.5.1hdrcde3.4
hexbin1.28.2hflights0.1
HH3.1-49highlight0.5.1
highr0.10Hmisc4.7-2
hms1.1.2htmlTable2.4.1
htmltools0.5.4htmlwidgets1.6.1
httpcode0.3.0httpuv1.6.8
httr1.4.4HydroMe2.0-1
HyperbolicDist0.6-4hypergeo1.2-13
ICC2.4.0ids1.0.1
igraph1.3.5igraphdata1.0.1
ineq0.2-13infer1.0.4
influenceR0.1.0.1ini0.3.1
inline0.3.19insight0.19.0
interp1.1-3intervals0.15.2
introgress1.2.3inum1.0-4
ipred0.9-13irlba2.3.5.1
Iso0.0-18.1isoband0.2.7
iterators1.0.14itertools0.1-3
janitor2.2.0jpeg0.1-10
jquerylib0.1.4jsonlite1.8.4
juicyjuice0.1.0kernelFactory0.3.0
kernlab0.9-32klaR1.7-1
knitr1.42ks1.14.0
labeling0.4.2labelled2.10.0
LaF0.8.4Lahman10.0-1
lars1.3later1.3.0
latticeExtra0.6-30lava1.7.1
lavaan0.6-13lavaan.survey1.1.3.1
lazyeval0.2.2lcda0.3.1
leaflet2.1.1leaflet.providers1.9.0
leaps3.1LearnBayes2.15.1
learnr0.11.2.9000lgr0.4.4
lhs1.1.6libcoin1.0-9
lifecycle1.0.3LIM1.4.7
limSolve1.5.6lisrelToR0.1.5
listenv0.9.0lme41.1-31
lmom2.9lmtest0.9-40
locfit1.5-9.7lokern1.1-9
loo2.5.1lpSolve5.6.18
lubridate1.9.1luz0.3.1
magic1.6-1magrittr2.0.3
manipulateWidget0.11.1mapproj1.2.11
maps3.4.1maptools1.1-6
markdown1.5Matching4.10-8
MatchIt4.5.0mathjaxr1.6-0
matrixcalc1.0-6MatrixModels0.5-1
matrixStats0.63.0maxLik1.5-2
mboost2.9-7mclust6.0.0
mcmc0.9-7MCMCglmm2.34
memoise2.0.1MEMSS0.9-3
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mice3.15.0microbenchmark1.4.9
mime0.12miniUI0.1.1.1
minpack.lm1.2-3minqa1.2.5
misc3d0.9-1miscTools0.6-26
mitools2.4mlbench2.1-3
mlmRev1.0-8mlogit1.1-1
mlr30.14.1mlr3measures0.5.0
mlr3misc0.11.0mnormt2.1.1
modeldata1.1.0modelenv0.1.0
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modeltime1.2.4modeltools0.2-23
moments0.14.1mondate0.10.02
mosaic1.8.4.2mosaicCore0.9.2.1
mosaicData0.20.3mratios1.4.2
multcomp1.4-20multicool0.1-12
munsell0.5.0mvMORPH1.1.6
mvtnorm1.1-3natserv1.0.0
network1.18.1networkD30.4
NISTnls0.9-13nleqslv3.3.4
nloptr2.0.3nls20.3-3
nlstools2.0-0nnls1.4
nortest1.0-4np0.60-16
numbers0.8-5numDeriv2016.8-1.1
odbc1.3.4openssl2.0.5
openxlsx4.2.5.1optextras2019-12.4
optimParallel1.0-2ordinal2022.11-16
padr0.6.2PairedData1.1.1
palmerpenguins0.1.1paradox0.11.0
parallelly1.34.0parsnip1.0.3
partitions1.10-7party1.3-11
partykit1.2-16pastecs1.3.21
patchwork1.1.2pbapply1.7-0
pbivnorm0.6.0pbkrtest0.5.2
pbmcapply1.5.1PBSmapping2.73.2
pcaPP2.0-3pedigree1.4.2
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phangorn2.11.1phytools1.2-0
pillar1.8.1pins1.1.0
pixmap0.4-12pkgbuild1.4.0
pkgconfig2.0.3pkgdown2.0.7
pkgload1.3.2PKPDmodels0.3.2
plm2.6-2plogr0.2.0
plot3D1.4plotly4.10.1
plotrix3.8-2pls2.8-1
plyr1.8.8png0.1-8
poLCA1.6.0.1polspline1.1.22
polyclip1.10-4polycor0.8-1
polynom1.4-1posterior1.3.1
prabclus2.3-2pracma2.4.2
praise1.0.0prettyunits1.1.1
princurve2.1.6pROC1.18.0
processx3.8.0prodlim2019.11.13
profileModel0.6.1profvis0.3.7
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prophet1.0proto1.0.0
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ps1.7.2pscl1.5.5
psy1.2psych2.2.9
purrr1.0.1qap0.1-2
qtl1.58quadprog1.5-8
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quantreg5.94questionr0.7.8
QUIC1.1.1qvcalc1.0.2
R.cache0.16.0R.devices2.17.1
R.filesets2.15.0R.huge0.9.0
R.matlab3.7.0R.methodsS31.8.2
R.oo1.25.0R.rsp0.45.0
R.utils2.12.2R2HTML2.3.3
R2OpenBUGS3.2-3.2.1R2WinBUGS2.1-21
R62.5.1ragg1.2.5
rainbow3.7randomForest4.7-1.1
rappdirs0.3.3raster3.6-14
ratelimitr0.4.1rbenchmark1.0.0
rbibutils2.2.13Rcgmin2022-4.30
rcmdcheck1.4.0RColorBrewer1.1-3
Rcpp1.0.10RcppAnnoy0.0.20
RcppArmadillo0.11.4.3.1RcppEigen0.3.3.9.3
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reactable0.4.3reactR0.4.4
readr2.1.3readstata130.10.0
readxl1.4.1recipes1.0.4
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reprex2.0.2reshape0.8.9
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rgl1.0.1RgoogleMaps1.4.5.3
RGraphics3.0-2riingo0.3.1
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RJDBC0.2-10rjson0.2.21
RJSONIO1.3-1.8rlang1.0.6
rlecuyer0.3-5rmarkdown2.20
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robustbase0.95-0ROCR1.0-11
Rook1.2rotl3.0.14
roxygen27.2.3RPostgreSQL0.7-4
rprojroot2.0.3rredlist0.7.1
rsample1.1.1RSQLite2.2.20
rstan2.21.8rstantools2.2.0
rstudioapi0.14Rttf2pt11.3.12
RUnit0.4.32rversions2.1.2
rvest1.0.3Rvmmin2018-4.17.1
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scatterplot3d0.3-42ScottKnott1.3-0
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segmented1.6-2selectr0.4-2
sem3.1-15SemiPar1.0-4.2
semTools0.5-6seqinr4.2-23
seriation1.4.1sessioninfo1.2.2
setRNG2022.4-1sets1.0-22
sf1.0-9sfsmisc1.1-14
shape1.4.6shapefiles0.7.2
shiny1.7.4shiny.semantic0.4.3
shinyjs2.1.0shinystan2.6.0
shinythemes1.2.0SimComp3.3
simsem0.5-16sitmo2.0.2
slam0.1-50slider0.3.0
sn2.1.0sna2.7-1
snakecase0.11.0snow0.4-4
snowfall1.84-6.2solrium1.2.0
sourcetools0.1.7-1sp1.6-0
spam2.9-1SparseM1.81
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spatstat.data3.0-0spatstat.explore3.0-6
spatstat.geom3.0-6spatstat.linnet3.0-4
spatstat.model3.1-2spatstat.random3.1-3
spatstat.sparse3.0-0spatstat.utils3.0-1
spData2.2.1spdep1.2-7
SQUAREM2021.1ssgraph1.15
stabs0.6-4StanHeaders2.21.0-7
statmod1.5.0statnet.common4.8.0
stringi1.7.12stringr1.5.0
strucchange1.5-3styler1.9.0
subplex1.8superml0.5.6
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survPresmooth1.1-11svUnit1.0.6
synbreedData1.5sys3.4.1
systemfonts1.0.4tables0.9.10
tabnet0.3.0taxize0.9.100
tensor1.5tensorA0.36.2
terra1.7-3testit0.13
testthat3.1.6textplot0.2.2
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threejs0.3.3tibble3.1.8
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tidyr1.3.0tidyselect1.2.0
tidyverse1.3.2timechange0.2.0
timeDate4022.108timeSeries4021.105
timetk2.8.2tinytex0.44
tis1.39tkrplot0.0-27
tmvtnorm1.5topicmodels.etm0.1.0
torch0.9.1torchaudio0.2.2
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triebeard0.3.0trimcluster0.1-5
tripack1.3-9.1truncnorm1.0-8
truncreg0.2-5tseries0.10-53
tsfeatures1.1TSP1.2-2
TTR0.24.3tune1.0.1
tweenr2.0.2tzdb0.3.0
ucminf1.1-4.1udpipe0.8.11
units0.8-1urca1.3-3
urlchecker1.0.1urltools1.7.3
usethis2.1.6utf81.2.3
uuid1.1-0uwot0.1.14
V84.2.2vcd1.4-11
vctrs0.5.2vegan2.6-4
VGAM1.1-7VGAMdata1.1-8
viridis0.6.2viridisLite0.4.1
visNetwork2.1.2vroom1.6.1
waldo0.4.0warp0.2.0
waveslim1.8.4wavethresh4.7.2
webshot0.5.4whisker0.4.1
widenet0.1-2WikidataQueryServiceR1.0.0
WikidataR2.3.3WikipediR1.5.0
wikitaxa0.4.0withr2.5.0
wk0.7.1word2vec0.3.4
workflows1.1.2workflowsets1.0.0
worrms0.4.2xfun0.37
xgboost1.7.3.1XLConnect1.0.7
xlsx0.6.5xlsxjars0.6.1
XML3.99-0.13xml21.3.3
xopen1.0.0xtable1.8-4
xts0.12.2yaml2.3.7
yardstick1.1.0zeallot0.1.0
zip2.2.2zoo1.8-11

RStudio Server

R: 4.2.2

rstudio-server: 2022.12.0-353

R packages

packageversionpackageversion
abc2.2.1abc.data1.0
abind1.4-5ACD1.5.3
acepack1.4.1actuar3.3-1
ada2.0-5ade41.7-20
ade4TkGUI0.3-1adegraphics1.0-16
adehabitatLT0.3.26adehabitatMA0.3.15
admisc0.30affxparser1.70.0
agricolae1.3-5akima0.6-3.4
AlgDesign1.2.1alphavantager0.1.2
Amelia1.8.1anytime0.3.9
ape5.6-2arm1.13-1
aroma.apd0.6.1ascii2.4
ash1.0-15askpass1.1
assertthat0.2.1AUC0.3.2
backports1.4.1base64enc0.1-3
bayesplot1.10.0BB2019.10-1
BDgraph2.71bdsmatrix1.3-6
BGLR1.1.0BH1.78.0-0
biganalytics1.1.21bigD0.2.0
biglars1.0.2biglm0.9-2.1
bigmemory4.6.1bigmemory.sri0.1.6
bigml0.1.2bindr0.1.1
bindrcpp0.2.2bit4.0.5
bit644.0.5bitops1.0-7
blob1.2.3BLR1.6
bold1.2.0bpca1.3-4
BradleyTerry21.1-2brew1.0-8
brglm0.7.2brglm20.8.2
bridgesampling1.1-2brio1.1.3
brms2.18.0Brobdingnag1.2-9
broom1.0.2bslib0.4.2
BsMD2020.4.30ca0.71.1
cachem1.0.6calibrator1.2-8
callr3.7.3car3.1-1
carData3.0-5caret6.0-93
caTools1.18.2cellranger1.1.0
checkmate2.1.0chron2.3-58
CircStats0.2-6classInt0.4-8
cli3.4.1clipr0.8.0
clock0.6.1clusterGeneration1.3.7
coda0.19-4coin1.4-2
collapse1.8.9colorspace2.0-3
colourpicker1.2.0combinat0.0-8
commonmark1.8.1conditionz0.1.0
conf.design2.0.0conflicted1.1.0
contfrac1.1-12coro1.0.3
corpcor1.6.10corrgram1.14
corrplot0.92cpp110.4.3
crayon1.5.2credentials1.3.2
crosstalk1.2.0crul1.3
cubature2.0.4.5curl4.3.3
CVST0.2-3d3Network0.5.2.1
DAAG1.25.4data.table1.14.6
DataExplorer0.8.2datapasta3.1.0
DBI1.1.3dbplyr2.2.1
deldir1.0-6dendextend1.16.0
DEoptimR1.0-11Deriv4.1.3
desc1.4.2deSolve1.34
devtools2.4.5dfidx0.0-5
dfoptim2020.10-1diagram1.6.5
DiagrammeR1.0.9dials1.1.0
DiceDesign1.9dichromat2.0-0.1
diffobj0.3.5digest0.6.31
dimRed0.2.6diptest0.76-0
discretization1.0-1.1distributional0.3.1
doBy4.6.15doc2vec0.2.0
DoE.base1.2-1doMC1.3.8
doParallel1.0.17dotCall641.0-2
downlit0.4.2downloader0.4
dplyr1.0.10dqrng0.3.0
DRR0.0.4DT0.26
dtplyr1.2.2dummies1.5.6
dygraphs1.1.1.6dynamicTreeCut1.63-1
e10711.7-12EbayesThresh1.4-12
effects4.2-2ellipse0.4.3
ellipsis0.3.2elliptic1.4-0
emulator1.2-21enrichwith0.3.1
equivalence0.7.2estimability1.4.1
ETLUtils1.5evaluate0.19
expint0.1-8expm0.999-6
extraDistr1.9.1extrafont0.18
extrafontdb1.0fansi1.0.3
farver2.1.1fastICA1.2-3
fastmap1.1.0fastmatch1.1-3
fda6.0.5fdrtool1.2.17
fds1.8fdth1.2-6
ff4.0.7ffbase0.13.3
fields14.1filehash2.4-3
filelock1.0.2flashClust1.01-2
flexmix2.3-18FNN1.1.3.1
fontawesome0.4.0forcats0.5.2
foreach1.5.2forecast8.19
formatR1.12Formula1.2-4
fpc2.2-9fracdiff1.5-2
fs1.5.2fts0.9.9.2
functional0.6furrr0.3.1
future1.30.0future.apply1.10.0
gam1.22gamlss5.4-10
gamlss.data6.0-2gamlss.dist6.0-5
gargle1.2.1gclus1.3.2
gdata2.18.0.1geepack1.3.9
genalg0.2.1generics0.1.3
genetics1.3.8.1.3geosphere1.5-18
gert1.9.2ggalt0.4.0
ggdendro0.1.23ggforce0.4.1
ggformula0.10.2ggmap3.0.1
ggplot23.4.0ggrepel0.9.2
ggridges0.5.4ggstance0.3.6
ggvis0.4.7gh1.3.1
git2r0.30.1gitcreds0.1.2
glassoFast1.0gld2.6.6
glmnet4.1-6globals0.16.2
glue1.6.2gmm1.7
gmodels2.18.1.1gmp0.6-9
goftest1.2-3googledrive2.0.0
googlesheets41.0.1googleVis0.7.0
gower1.0.0GPArotation2022.10-2
gpclib1.5-6GPfit1.0-8
gplots3.1.3gradethis0.2.11.9000
gridBase0.4-7gridExtra2.3
gridGraphics0.5-1gridSVG1.7-4
grImport0.9-5grImport20.2-0
gsubfn0.7gt0.8.0
gtable0.3.1gtools3.9.4
HaploSim1.8.4.2hardhat1.2.0
haven2.5.1hdrcde3.4
hexbin1.28.2hflights0.1
HH3.1-49highlight0.5.0
highr0.9Hmisc4.7-2
hms1.1.2htmlTable2.4.1
htmltools0.5.4htmlwidgets1.6.0
httpcode0.3.0httpuv1.6.7
httr1.4.4HydroMe2.0-1
HyperbolicDist0.6-4hypergeo1.2-13
ICC2.4.0ids1.0.1
igraph1.3.5igraphdata1.0.1
ineq0.2-13infer1.0.4
influenceR0.1.0.1ini0.3.1
inline0.3.19insight0.18.8
interp1.1-3intervals0.15.2
introgress1.2.3inum1.0-4
ipred0.9-13irlba2.3.5.1
Iso0.0-18.1isoband0.2.6
iterators1.0.14itertools0.1-3
janitor2.1.0jpeg0.1-10
jquerylib0.1.4jsonlite1.8.4
juicyjuice0.1.0kernelFactory0.3.0
kernlab0.9-31klaR1.7-1
knitr1.41ks1.14.0
labeling0.4.2labelled2.10.0
LaF0.8.4Lahman10.0-1
lars1.3later1.3.0
latticeExtra0.6-30lava1.7.0
lavaan0.6-12lavaan.survey1.1.3.1
lazyeval0.2.2lcda0.3.1
leaflet2.1.1leaflet.providers1.9.0
leaps3.1LearnBayes2.15.1
learnr0.11.2.9000lgr0.4.4
lhs1.1.6libcoin1.0-9
lifecycle1.0.3LIM1.4.7
limSolve1.5.6lisrelToR0.1.5
listenv0.9.0lme41.1-31
lmom2.9lmtest0.9-40
locfit1.5-9.6lokern1.1-9
loo2.5.1lpSolve5.6.17
lubridate1.9.0luz0.3.1
magic1.6-1magrittr2.0.3
manipulateWidget0.11.1mapproj1.2.9
maps3.4.1maptools1.1-6
markdown1.4Matching4.10-8
MatchIt4.5.0mathjaxr1.6-0
matrixcalc1.0-6MatrixModels0.5-1
matrixStats0.63.0maxLik1.5-2
mboost2.9-7mclust6.0.0
mcmc0.9-7MCMCglmm2.34
memoise2.0.1MEMSS0.9-3
Metrics0.1.4mi1.1
mice3.15.0microbenchmark1.4.9
mime0.12miniUI0.1.1.1
minpack.lm1.2-2minqa1.2.5
misc3d0.9-1miscTools0.6-26
mitools2.4mlbench2.1-3
mlmRev1.0-8mlogit1.1-1
mlr30.14.1mlr3measures0.5.0
mlr3misc0.11.0mnormt2.1.1
modeldata1.0.1modelenv0.1.0
ModelMetrics1.2.2.2modelr0.1.10
modeltime1.2.4modeltools0.2-23
moments0.14.1mondate0.10.02
mosaic1.8.4.2mosaicCore0.9.2.1
mosaicData0.20.3mratios1.4.2
multcomp1.4-20multicool0.1-12
munsell0.5.0mvMORPH1.1.6
mvtnorm1.1-3natserv1.0.0
network1.18.0networkD30.4
NISTnls0.9-13nleqslv3.3.3
nloptr2.0.3nls20.3-3
nlstools2.0-0nnls1.4
nortest1.0-4np0.60-16
numbers0.8-5numDeriv2016.8-1.1
odbc1.3.3openssl2.0.5
openxlsx4.2.5.1optextras2019-12.4
optimParallel1.0-2ordinal2022.11-16
padr0.6.2PairedData1.1.1
palmerpenguins0.1.1paradox0.11.0
parallelly1.33.0parsnip1.0.3
partitions1.10-7party1.3-11
partykit1.2-16pastecs1.3.21
patchwork1.1.2pbapply1.6-0
pbivnorm0.6.0pbkrtest0.5.1
pbmcapply1.5.1PBSmapping2.73.2
pcaPP2.0-3pedigree1.4.2
PerformanceAnalytics2.0.4permute0.9-7
phangorn2.10.0phytools1.2-0
pillar1.8.1pins1.0.3
pixmap0.4-12pkgbuild1.4.0
pkgconfig2.0.3pkgdown2.0.7
pkgload1.3.2PKPDmodels0.3.2
plm2.6-2plogr0.2.0
plot3D1.4plotly4.10.1
plotrix3.8-2pls2.8-1
plyr1.8.8png0.1-8
poLCA1.6.0.1polspline1.1.22
polyclip1.10-4polycor0.8-1
polynom1.4-1posterior1.3.1
prabclus2.3-2pracma2.4.2
praise1.0.0prettyunits1.1.1
princurve2.1.6pROC1.18.0
processx3.8.0prodlim2019.11.13
profileModel0.6.1profvis0.3.7
progress1.2.2progressr0.12.0
proj41.0-12promises1.2.0.1
prophet1.0proto1.0.0
proxy0.4-27PRROC1.3.1
ps1.7.2pscl1.5.5
psy1.2psych2.2.9
purrr0.3.5qap0.1-2
qtl1.54quadprog1.5-8
Quandl2.11.0quantmod0.4.20
quantreg5.94questionr0.7.7
QUIC1.1.1qvcalc1.0.2
R.cache0.16.0R.devices2.17.1
R.filesets2.15.0R.huge0.9.0
R.matlab3.7.0R.methodsS31.8.2
R.oo1.25.0R.rsp0.45.0
R.utils2.12.2R2HTML2.3.3
R2OpenBUGS3.2-3.2.1R2WinBUGS2.1-21
R62.5.1ragg1.2.4
rainbow3.7randomForest4.7-1.1
rappdirs0.3.3raster3.6-11
ratelimitr0.4.1rbenchmark1.0.0
rbibutils2.2.11Rcgmin2022-4.30
rcmdcheck1.4.0RColorBrewer1.1-3
Rcpp1.0.9RcppAnnoy0.0.20
RcppArmadillo0.11.4.2.1RcppEigen0.3.3.9.3
RcppParallel5.1.5RcppProgress0.4.2
RcppRoll0.3.0Rcsdp0.1.57.4
RCurl1.98-1.9Rdpack2.4
reactable0.4.1reactR0.4.4
readr2.1.3readstata130.10.0
readxl1.4.1recipes1.0.3
registry0.5-1regress1.3-21
relaxnet0.3-2reliaR0.01
relimp1.0-5rematch1.0.1
rematch22.1.2remotes2.4.2
rentrez1.2.3renv0.16.0
reprex2.0.2reshape0.8.9
reshape21.4.4rex1.2.1
rgl0.110.2RgoogleMaps1.4.5.3
RGraphics3.0-2riingo0.3.1
ritis1.0.0rJava1.0-6
RJDBC0.2-10rjson0.2.21
RJSONIO1.3-1.6rlang1.0.6
rlecuyer0.3-5rmarkdown2.19
Rmpfr0.8-9rms6.3-0
RMySQL0.10.25rncl0.8.6
robustbase0.95-0ROCR1.0-11
Rook1.2rotl3.0.14
roxygen27.2.3RPostgreSQL0.7-4
rprojroot2.0.3rredlist0.7.1
rsample1.1.1RSQLite2.2.19
rstan2.21.7rstantools2.2.0
rstudioapi0.14Rttf2pt11.3.11
RUnit0.4.32rversions2.1.2
rvest1.0.3Rvmmin2018-4.17.1
s21.1.1sandwich3.0-2
sass0.4.4scales1.2.1
scatterplot3d0.3-42ScottKnott1.3-0
SDMTools1.1-221.2sealasso0.1-3
segmented1.6-2selectr0.4-2
sem3.1-15SemiPar1.0-4.2
semTools0.5-6seqinr4.2-23
seriation1.4.0sessioninfo1.2.2
setRNG2022.4-1sets1.0-21
sf1.0-9sfsmisc1.1-14
shape1.4.6shapefiles0.7.2
shiny1.7.4shiny.semantic0.4.3
shinyjs2.1.0shinystan2.6.0
shinythemes1.2.0SimComp3.3
simsem0.5-16sitmo2.0.2
slam0.1-50slider0.3.0
sn2.1.0sna2.7
snakecase0.11.0snow0.4-4
snowfall1.84-6.2solrium1.2.0
sourcetools0.1.7sp1.5-1
spam2.9-1SparseM1.81
SpatialExtremes2.1-0spatstat3.0-2
spatstat.data3.0-0spatstat.explore3.0-5
spatstat.geom3.0-3spatstat.linnet3.0-3
spatstat.model3.0-2spatstat.random3.0-1
spatstat.sparse3.0-0spatstat.utils3.0-1
spData2.2.1spdep1.2-7
SQUAREM2021.1ssgraph1.14
stabs0.6-4StanHeaders2.21.0-7
statmod1.4.37statnet.common4.7.0
stringi1.7.8stringr1.5.0
strucchange1.5-3styler1.8.1
subplex1.8superml0.5.6
SuppDists1.1-9.7survey4.1-1
survPresmooth1.1-11svUnit1.0.6
synbreedData1.5sys3.4.1
systemfonts1.0.4tables0.9.10
tabnet0.3.0taxize0.9.100
tensor1.5tensorA0.36.2
terra1.6-47testit0.13
testthat3.1.6textplot0.2.2
textshaping0.3.6TH.data1.1-1
threejs0.3.3tibble3.1.8
tidymodels1.0.0tidyquant1.0.6
tidyr1.2.1tidyselect1.2.0
tidyverse1.3.2timechange0.1.1
timeDate4021.107timeSeries4021.105
timetk2.8.2tinytex0.43
tis1.39tkrplot0.0-27
tmvtnorm1.5topicmodels.etm0.1.0
torch0.9.0torchaudio0.2.0
torchdatasets0.2.0torchvision0.4.1
triebeard0.3.0trimcluster0.1-5
tripack1.3-9.1truncnorm1.0-8
truncreg0.2-5tseries0.10-52
tsfeatures1.1TSP1.2-1
TTR0.24.3tune1.0.1
tweenr2.0.2tzdb0.3.0
ucminf1.1-4.1udpipe0.8.10
units0.8-1urca1.3-3
urlchecker1.0.1urltools1.7.3
usethis2.1.6utf81.2.2
uuid1.1-0uwot0.1.14
V84.2.2vcd1.4-10
vctrs0.5.1vegan2.6-4
VGAM1.1-7VGAMdata1.1-6
viridis0.6.2viridisLite0.4.1
visNetwork2.1.2vroom1.6.0
waldo0.4.0warp0.2.0
waveslim1.8.4wavethresh4.7.2
webshot0.5.4whisker0.4.1
widenet0.1-2WikidataQueryServiceR1.0.0
WikidataR2.3.3WikipediR1.5.0
wikitaxa0.4.0withr2.5.0
wk0.7.1word2vec0.3.4
workflows1.1.2workflowsets1.0.0
worrms0.4.2xfun0.35
xgboost1.6.0.1XLConnect1.0.6
xlsx0.6.5xlsxjars0.6.1
XML3.99-0.13xml21.3.3
xopen1.0.0xtable1.8-4
xts0.12.2yaml2.3.6
yardstick1.1.0zeallot0.1.0
zip2.2.2zoo1.8-11
packageversionpackageversion
abc2.2.1abc.data1.0
abind1.4-5ACD1.5.3
acepack1.4.1actuar3.3-1
ada2.0-5ade41.7-20
ade4TkGUI0.3-1adegraphics1.0-16
adehabitatLT0.3.26adehabitatMA0.3.15
admisc0.30affxparser1.70.0
agricolae1.3-5akima0.6-3.4
AlgDesign1.2.1alphavantager0.1.2
Amelia1.8.1anytime0.3.9
ape5.6-2arm1.13-1
aroma.apd0.6.1ascii2.4
ash1.0-15askpass1.1
assertthat0.2.1AUC0.3.2
backports1.4.1base64enc0.1-3
bayesplot1.10.0BB2019.10-1
BDgraph2.71bdsmatrix1.3-6
BGLR1.1.0BH1.78.0-0
biganalytics1.1.21bigD0.2.0
biglars1.0.2biglm0.9-2.1
bigmemory4.6.1bigmemory.sri0.1.6
bigml0.1.2bindr0.1.1
bindrcpp0.2.2bit4.0.5
bit644.0.5bitops1.0-7
blob1.2.3BLR1.6
bold1.2.0bpca1.3-4
BradleyTerry21.1-2brew1.0-8
brglm0.7.2brglm20.8.2
bridgesampling1.1-2brio1.1.3
brms2.18.0Brobdingnag1.2-9
broom1.0.2bslib0.4.2
BsMD2020.4.30ca0.71.1
cachem1.0.6calibrator1.2-8
callr3.7.3car3.1-1
carData3.0-5caret6.0-93
caTools1.18.2cellranger1.1.0
checkmate2.1.0chron2.3-58
CircStats0.2-6classInt0.4-8
cli3.4.1clipr0.8.0
clock0.6.1clusterGeneration1.3.7
coda0.19-4coin1.4-2
collapse1.8.9colorspace2.0-3
colourpicker1.2.0combinat0.0-8
commonmark1.8.1conditionz0.1.0
conf.design2.0.0conflicted1.1.0
contfrac1.1-12coro1.0.3
corpcor1.6.10corrgram1.14
corrplot0.92cpp110.4.3
crayon1.5.2credentials1.3.2
crosstalk1.2.0crul1.3
cubature2.0.4.5curl4.3.3
CVST0.2-3d3Network0.5.2.1
DAAG1.25.4data.table1.14.6
DataExplorer0.8.2datapasta3.1.0
DBI1.1.3dbplyr2.2.1
deldir1.0-6dendextend1.16.0
DEoptimR1.0-11Deriv4.1.3
desc1.4.2deSolve1.34
devtools2.4.5dfidx0.0-5
dfoptim2020.10-1diagram1.6.5
DiagrammeR1.0.9dials1.1.0
DiceDesign1.9dichromat2.0-0.1
diffobj0.3.5digest0.6.31
dimRed0.2.6diptest0.76-0
discretization1.0-1.1distributional0.3.1
doBy4.6.15doc2vec0.2.0
DoE.base1.2-1doMC1.3.8
doParallel1.0.17dotCall641.0-2
downlit0.4.2downloader0.4
dplyr1.0.10dqrng0.3.0
DRR0.0.4DT0.26
dtplyr1.2.2dummies1.5.6
dygraphs1.1.1.6dynamicTreeCut1.63-1
e10711.7-12EbayesThresh1.4-12
effects4.2-2ellipse0.4.3
ellipsis0.3.2elliptic1.4-0
emulator1.2-21enrichwith0.3.1
equivalence0.7.2estimability1.4.1
ETLUtils1.5evaluate0.19
expint0.1-8expm0.999-6
extraDistr1.9.1extrafont0.18
extrafontdb1.0fansi1.0.3
farver2.1.1fastICA1.2-3
fastmap1.1.0fastmatch1.1-3
fda6.0.5fdrtool1.2.17
fds1.8fdth1.2-6
ff4.0.7ffbase0.13.3
fields14.1filehash2.4-3
filelock1.0.2flashClust1.01-2
flexmix2.3-18FNN1.1.3.1
fontawesome0.4.0forcats0.5.2
foreach1.5.2forecast8.19
formatR1.12Formula1.2-4
fpc2.2-9fracdiff1.5-2
fs1.5.2fts0.9.9.2
functional0.6furrr0.3.1
future1.30.0future.apply1.10.0
gam1.22gamlss5.4-10
gamlss.data6.0-2gamlss.dist6.0-5
gargle1.2.1gclus1.3.2
gdata2.18.0.1geepack1.3.9
genalg0.2.1generics0.1.3
genetics1.3.8.1.3geosphere1.5-18
gert1.9.2ggalt0.4.0
ggdendro0.1.23ggforce0.4.1
ggformula0.10.2ggmap3.0.1
ggplot23.4.0ggrepel0.9.2
ggridges0.5.4ggstance0.3.6
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PRROC1.3.1ps1.7.2
pscl1.5.5psy1.2
psych2.2.9purrr0.3.5
qap0.1-2qtl1.52
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R.devices2.17.1R.filesets2.15.0
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R.methodsS31.8.2R.oo1.25.0
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Rcgmin2022-4.30rcmdcheck1.4.0
RColorBrewer1.1-3Rcpp1.0.9
RcppArmadillo0.11.4.2.1RcppEigen0.3.3.9.3
RcppParallel5.1.5RcppProgress0.4.2
RcppRoll0.3.0Rcsdp0.1.57.2
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readxl1.4.1recipes1.0.3
registry0.5-1regress1.3-21
relaxnet0.3-2reliaR0.01
relimp1.0-5rematch1.0.1
rematch22.1.2remote1.2.1
remotes2.4.2rentrez1.2.3
renv0.16.0reprex2.0.2
reshape0.8.9reshape21.4.4
rex1.2.1rgl0.110.2
RgoogleMaps1.4.5.3RGraphics3.0-2
riingo0.3.1ritis1.0.0
rJava1.0-6RJDBC0.2-10
rjson0.2.21RJSONIO1.3-1.6
rlang1.0.6rlecuyer0.3-5
rmarkdown2.18Rmpfr0.8-9
rms6.3-0RMySQL0.10.24
rncl0.8.6robustbase0.95-0
ROCR1.0-11Rook1.2
rotl3.0.14roxygen27.2.2
RPostgreSQL0.7-4rprojroot2.0.3
rredlist0.7.1rsample1.1.0
RSQLite2.2.18rstan2.21.7
rstantools2.2.0rstudioapi0.14
RUnit0.4.32rversions2.1.2
rvest1.0.3Rvmmin2018-4.17.1
s21.1.0sandwich3.0-2
sass0.4.2scales1.2.1
scatterplot3d0.3-42ScottKnott1.3-0
SDMTools1.1-221.2sealasso0.1-3
segmented1.6-1selectr0.4-2
sem3.1-15SemiPar1.0-4.2
semTools0.5-6seqinr4.2-16
seriation1.4.0sessioninfo1.2.2
setRNG2022.4-1sets1.0-21
sf1.0-9sfsmisc1.1-13
shape1.4.6shapefiles0.7.2
shiny1.7.3shiny.semantic0.4.3
shinyjs2.1.0shinystan2.6.0
shinythemes1.2.0SimComp3.3
simsem0.5-16slam0.1-50
slider0.3.0sn2.1.0
sna2.7snakecase0.11.0
snow0.4-4snowfall1.84-6.2
solrium1.2.0sourcetools0.1.7
sp1.5-1spam2.9-1
SparseM1.81SpatialExtremes2.1-0
spatstat3.0-2spatstat.data3.0-0
spatstat.explore3.0-5spatstat.geom3.0-3
spatstat.linnet3.0-2spatstat.model3.0-2
spatstat.random3.0-1spatstat.sparse3.0-0
spatstat.utils3.0-1spData2.2.0
spdep1.2-7SQUAREM2021.1
ssgraph1.14stabs0.6-4
StanHeaders2.21.0-7statmod1.4.37
statnet.common4.7.0stringi1.7.8
stringr1.4.1strucchange1.5-3
styler1.8.1subplex1.8
superml0.5.6SuppDists1.1-9.7
survey4.1-1survPresmooth1.1-11
svUnit1.0.6sybil2.2.0
synbreedData1.5sys3.4.1
systemfonts1.0.4tables0.9.10
taxize0.9.100tensor1.5
tensorA0.36.2terra1.6-17
testit0.13testthat3.1.5
textshaping0.3.6TH.data1.1-1
threejs0.3.3tibble3.1.8
tidymodels1.0.0tidyquant1.0.6
tidyr1.2.1tidyselect1.2.0
tidyverse1.3.2timechange0.1.1
timeDate4021.106timeSeries4021.105
timetk2.8.1tinytex0.42
tis1.39tkrplot0.0-27
tmvtnorm1.5triebeard0.3.0
trimcluster0.1-5tripack1.3-9.1
truncnorm1.0-8truncreg0.2-5
tseries0.10-52tsfeatures1.1
TSP1.2-1TTR0.24.3
tune1.0.1tweenr2.0.2
tzdb0.3.0ucminf1.1-4.1
units0.8-0urca1.3-3
urlchecker1.0.1urltools1.7.3
usethis2.1.6utf81.2.2
uuid1.1-0V84.2.2
vcd1.4-10vctrs0.5.0
vegan2.6-4VGAM1.1-7
VGAMdata1.1-6viridis0.6.2
viridisLite0.4.1visNetwork2.1.2
vroom1.6.0waldo0.4.0
warp0.2.0waveslim1.8.4
wavethresh4.7.1webshot0.5.4
whisker0.4widenet0.1-2
WikidataQueryServiceR1.0.0WikidataR2.3.3
WikipediR1.5.0wikitaxa0.4.0
withr2.5.0wk0.7.0
workflows1.1.2workflowsets1.0.0
worrms0.4.2xfun0.34
xgboost1.6.0.1XLConnect1.0.6
xlsx0.6.5xlsxjars0.6.1
XML3.99-0.12xml21.3.3
xopen1.0.0xtable1.8-4
xts0.12.2yaml2.3.6
yardstick1.1.0zip2.2.2
zoo1.8-11
packageversionpackageversion
abc2.2.1abc.data1.0
abind1.4-5ACD1.5.3
acepack1.4.1actuar3.3-0
ada2.0-5ade41.7-19
ade4TkGUI0.3-1adegraphics1.0-16
adehabitatLT0.3.25adehabitatMA0.3.14
admisc0.29affxparser1.68.1
agricolae1.3-5akima0.6-3.4
AlgDesign1.2.1Amelia1.8.0
ape5.6-2arm1.12-2
aroma.apd0.6.1ascii2.4
ash1.0-15askpass1.1
assertthat0.2.1AUC0.3.2
backports1.4.1base64enc0.1-3
BB2019.10-1BDgraph2.68
bdsmatrix1.3-6BGLR1.1.0
BH1.78.0-0biganalytics1.1.21
biglars1.0.2biglm0.9-2.1
bigmemory4.6.1bigmemory.sri0.1.3
bigml0.1.2bindr0.1.1
bindrcpp0.2.2bit4.0.4
bit644.0.5bitops1.0-7
blob1.2.3BLR1.6
bold1.2.0bpca1.3-4
BradleyTerry21.1-2brew1.0-7
brglm0.7.2brio1.1.3
broom1.0.0bslib0.4.0
BsMD2020.4.30cachem1.0.6
calibrator1.2-8callr3.7.1
carData3.0-5caret6.0-92
caTools1.18.2cellranger1.1.0
checkmate2.1.0chron2.3-57
CircStats0.2-6classInt0.4-7
cli3.3.0clipr0.8.0
clusterGeneration1.3.7coda0.19-4
coin1.4-2collapse1.8.6
colorspace2.0-3combinat0.0-8
commonmark1.8.0conditionz0.1.0
conf.design2.0.0contfrac1.1-12
corpcor1.6.10corrgram1.14
corrplot0.92cpp110.4.2
crayon1.5.1credentials1.3.2
crosstalk1.2.0crul1.2.0
cubature2.0.4.4curl4.3.2
CVST0.2-3d3Network0.5.2.1
DAAG1.25.4data.table1.14.2
DataExplorer0.8.2DBI1.1.3
deldir1.0-6dendextend1.16.0
DEoptimR1.0-11Deriv4.1.3
desc1.4.1deSolve1.33
devtools2.4.4dfidx0.0-5
dfoptim2020.10-1diagram1.6.5
dichromat2.0-0.1diffobj0.3.5
digest0.6.29dimRed0.2.6
diptest0.76-0discretization1.0-1.1
doBy4.6.13DoE.base1.2-1
doMC1.3.8doParallel1.0.17
dotCall641.0-1downlit0.4.2
dplyr1.0.9DRR0.0.4
dummies1.5.6dynamicTreeCut1.63-1
e10711.7-11EbayesThresh1.4-12
effects4.2-2ellipse0.4.3
ellipsis0.3.2elliptic1.4-0
emulator1.2-21equivalence0.7.2
estimability1.4.1ETLUtils1.5
evaluate0.15expint0.1-7
expm0.999-6fansi1.0.3
farver2.1.1fastICA1.2-3
fastmap1.1.0fastmatch1.1-3
fda6.0.5fdrtool1.2.17
fds1.8fdth1.2-6
ff4.0.7ffbase0.13.3
fields14.0filehash2.4-3
flashClust1.01-2flexmix2.3-18
FNN1.1.3.1fontawesome0.3.0
forcats0.5.1foreach1.5.2
formatR1.12Formula1.2-4
fpc2.2-9fs1.5.2
fts0.9.9.2functional0.6
future1.27.0future.apply1.9.0
gam1.20.2gamlss5.4-3
gamlss.data6.0-2gamlss.dist6.0-3
gclus1.3.2gdata2.18.0.1
geepack1.3.4genalg0.2.1
generics0.1.3genetics1.3.8.1.3
geosphere1.5-14gert1.7.0
ggdendro0.1.23ggforce0.3.3
ggformula0.10.1ggmap3.0.0
ggplot23.3.6ggrepel0.9.1
ggridges0.5.3ggstance0.3.5
gh1.3.0git2r0.30.1
gitcreds0.1.1glassoFast1.0
gld2.6.5glmnet4.1-4
globals0.16.0glue1.6.2
gmm1.6-6gmodels2.18.1.1
gmp0.6-5goftest1.2-3
googleVis0.7.0gower1.0.0
GPArotation2022.4-1gpclib1.5-6
gplots3.1.3gridBase0.4-7
gridExtra2.3gridGraphics0.5-1
gridSVG1.7-4grImport0.9-5
grImport20.2-0gsubfn0.7
gtable0.3.0gtools3.9.3
HaploSim1.8.4.1hardhat1.2.0
haven2.5.0hdrcde3.4
hexbin1.28.2hflights0.1
HH3.1-47highlight0.5.0
highr0.9Hmisc4.7-0
hms1.1.1htmlTable2.4.1
htmltools0.5.3htmlwidgets1.5.4
httpcode0.3.0httpuv1.6.5
httr1.4.3HydroMe2.0-1
HyperbolicDist0.6-4hypergeo1.2-13
ICC2.4.0igraph1.3.4
igraphdata1.0.1ineq0.2-13
ini0.3.1inline0.3.19
insight0.18.0interp1.1-3
intervals0.15.2introgress1.2.3
inum1.0-4ipred0.9-13
IRdisplay1.1IRkernel1.3
Iso0.0-18.1isoband0.2.5
iterators1.0.14itertools0.1-3
jpeg0.1-9jquerylib0.1.4
jsonlite1.8.0kernelFactory0.3.0
kernlab0.9-31klaR1.7-1
knitr1.39ks1.13.5
labeling0.4.2labelled2.9.1
LaF0.8.4Lahman10.0-1
lars1.3later1.3.0
latticeExtra0.6-30lava1.6.10
lavaan0.6-12lavaan.survey1.1.3.1
lazyeval0.2.2lcda0.3.1
leaflet2.1.1leaflet.providers1.9.0
leaps3.1LearnBayes2.15.1
lgr0.4.3libcoin1.0-9
lifecycle1.0.1LIM1.4.7
limSolve1.5.6lisrelToR0.1.5
listenv0.8.0lme41.1-30
lmom2.9lmtest0.9-40
locfit1.5-9.6lokern1.1-9
lpSolve5.6.15lubridate1.8.0
magic1.6-0magrittr2.0.3
manipulateWidget0.11.1mapproj1.2.8
maps3.4.0maptools1.1-4
markdown1.1Matching4.10-2
MatchIt4.4.0mathjaxr1.6-0
matrixcalc1.0-5MatrixModels0.5-0
matrixStats0.62.0maxLik1.5-2
mboost2.9-7mclust5.4.10
mcmc0.9-7MCMCglmm2.34
memoise2.0.1MEMSS0.9-3
Metrics0.1.4mi1.1
mice3.14.0microbenchmark1.4.9
mime0.12miniUI0.1.1.1
minpack.lm1.2-2minqa1.2.4
misc3d0.9-1miscTools0.6-26
mitools2.4mlbench2.1-3
mlmRev1.0-8mlogit1.1-1
mlr30.13.4mlr3measures0.5.0
mlr3misc0.10.0mnormt2.1.0
ModelMetrics1.2.2.2modeltools0.2-23
moments0.14.1mondate0.10.02
mosaic1.8.3mosaicCore0.9.0
mosaicData0.20.2mratios1.4.2
multcomp1.4-20multicool0.1-12
munsell0.5.0mvMORPH1.1.6
mvtnorm1.1-3natserv1.0.0
network1.17.2networkD30.4
NISTnls0.9-13nloptr2.0.3
nls20.3-3nlstools2.0-0
nnls1.4nortest1.0-4
np0.60-11numbers0.8-2
numDeriv2016.8-1.1openssl2.0.2
openxlsx4.2.5optextras2019-12.4
ordinal2019.12-10PairedData1.1.1
palmerpenguins0.1.0paradox0.10.0
parallelly1.32.1partitions1.10-7
party1.3-10partykit1.2-16
pastecs1.3.21pbapply1.5-0
pbdZMQ0.3-7pbivnorm0.6.0
pbkrtest0.5.1pbmcapply1.5.1
PBSmapping2.73.1pcaPP2.0-2
pedigree1.4.1permute0.9-7
phangorn2.9.0phytools1.0-3
pillar1.8.0pixmap0.4-12
pkgbuild1.3.1pkgconfig2.0.3
pkgdown2.0.6pkgload1.3.0
plm2.6-1plogr0.2.0
plot3D1.4plotly4.10.0
plotrix3.8-2pls2.8-1
plyr1.8.7png0.1-7
poLCA1.6.0.1polspline1.1.20
polyclip1.10-0polycor0.8-1
polynom1.4-1prabclus2.3-2
pracma2.3.8praise1.0.0
prettyunits1.1.1princurve2.1.6
pROC1.18.0processx3.7.0
prodlim2019.11.13profileModel0.6.1
profvis0.3.7progress1.2.2
progressr0.10.1promises1.2.0.1
proto1.0.0proxy0.4-27
PRROC1.3.1ps1.7.1
pscl1.5.5psy1.2
psych2.2.5purrr0.3.4
qap0.1-2qtl1.52
quadprog1.5-8quantmod0.4.20
quantreg5.94questionr0.7.7
qvcalc1.0.2R.cache0.16.0
R.devices2.17.1R.filesets2.15.0
R.huge0.9.0R.matlab3.6.2
R.methodsS31.8.2R.oo1.25.0
R.rsp0.45.0R.utils2.12.0
R2HTML2.3.3R2OpenBUGS3.2-3.2.1
R2WinBUGS2.1-21R62.5.1
ragg1.2.2rainbow3.6
randomForest4.7-1.1rappdirs0.3.3
raster3.5-21ratelimitr0.4.1
rbenchmark1.0.0rbibutils2.2.8
Rcgmin2022-4.30rcmdcheck1.4.0
RColorBrewer1.1-3Rcpp1.0.9
RcppArmadillo0.11.2.0.0RcppEigen0.3.3.9.2
RcppParallel5.1.5RcppProgress0.4.2
RcppRoll0.3.0Rcsdp0.1.57.2
RCurl1.98-1.8Rdpack2.4
readr2.1.2readstata130.10.0
recipes1.0.1registry0.5-1
regress1.3-21relaxnet0.3-2
reliaR0.01relimp1.0-5
rematch1.0.1rematch22.1.2
remotes2.4.2rentrez1.2.3
repr1.1.4reshape0.8.9
reshape21.4.4rex1.2.1
rgl0.109.6RgoogleMaps1.4.5.3
RGraphics3.0-2ritis1.0.0
rJava1.0-6RJDBC0.2-10
rjson0.2.21RJSONIO1.3-1.6
rlang1.0.4rlecuyer0.3-5
rmarkdown2.14Rmpfr0.8-9
rms6.3-0RMySQL0.10.23
rncl0.8.6robustbase0.95-0
ROCR1.0-11Rook1.1-1
rotl3.0.12roxygen27.2.1
rprojroot2.0.3rredlist0.7.0
RSQLite2.2.15rstudioapi0.13
RUnit0.4.32rversions2.1.1
Rvmmin2018-4.17.1s21.1.0
sandwich3.0-2sass0.4.2
scales1.2.0scatterplot3d0.3-41
ScottKnott1.3-0SDMTools1.1-221.2
sealasso0.1-3segmented1.6-0
sem3.1-15SemiPar1.0-4.2
semTools0.5-6seqinr4.2-16
seriation1.3.6sessioninfo1.2.2
setRNG2022.4-1sets1.0-21
sf1.0-8sfsmisc1.1-13
shape1.4.6shapefiles0.7
shiny1.7.2shinyjs2.1.0
SimComp3.3simsem0.5-16
slam0.1-50sn2.0.2
sna2.7snow0.4-4
snowfall1.84-6.2solrium1.2.0
sourcetools0.1.7sp1.5-0
spam2.9-1SparseM1.81
SpatialExtremes2.1-0spatstat2.3-4
spatstat.core2.4-4spatstat.data2.2-0
spatstat.geom2.4-0spatstat.linnet2.3-2
spatstat.random2.2-0spatstat.sparse2.1-1
spatstat.utils2.3-1spData2.0.1
spdep1.2-4SQUAREM2021.1
ssgraph1.13stabs0.6-4
StanHeaders2.21.0-7statmod1.4.36
statnet.common4.6.0stringi1.7.8
stringr1.4.0strucchange1.5-3
styler1.7.0subplex1.8
superml0.5.5SuppDists1.1-9.7
survey4.1-1survPresmooth1.1-11
svUnit1.0.6sybil2.2.0
synbreedData1.5sys3.4
systemfonts1.0.4tables0.9.6
taxize0.9.100tensor1.5
tensorA0.36.2terra1.6-7
testit0.13testthat3.1.4
textshaping0.3.6TH.data1.1-1
tibble3.1.8tidyr1.2.0
tidyselect1.1.2timeDate4021.104
timeSeries4021.104tinytex0.40
tis1.39tkrplot0.0-26
tmvtnorm1.5triebeard0.3.0
trimcluster0.1-5tripack1.3-9.1
truncnorm1.0-8truncreg0.2-5
tseries0.10-51TSP1.2-1
TTR0.24.3tweenr1.0.2
tzdb0.3.0ucminf1.1-4
units0.8-0urca1.3-0
urlchecker1.0.1urltools1.7.3
usethis2.1.6utf81.2.2
uuid1.1-0vcd1.4-10
vctrs0.4.1vegan2.6-2
VGAM1.1-7VGAMdata1.1-6
viridis0.6.2viridisLite0.4.0
vroom1.5.7waldo0.4.0
waveslim1.8.3wavethresh4.7.0
webshot0.5.3whisker0.4
widenet0.1-2WikidataQueryServiceR1.0.0
WikidataR2.3.3WikipediR1.5.0
wikitaxa0.4.0withr2.5.0
wk0.6.0worrms0.4.2
xfun0.31xlsx0.6.5
xlsxjars0.6.1XML3.99-0.10
xml21.3.3xopen1.0.0
xtable1.8-4xts0.12.1
yaml2.3.5zip2.2.0
zoo1.8-10

After the EC2 instance is started, you can access the RShiny Server with its public IP address. For example, if the IP address is 10.11.12.13, typing http://10.11.12.13 in the browser will bring you to the following startup page:

The RShiny applications are served from the directory /srv/shiny-server.

main page

RShiny Server

    R: 4.4.2

    rshiny-server: 1.5.22.1017

Release Notes

Upgraded R to version 4.4.2, and all R packages to their latest versions.

This AMI provides thousands of R packages covering various domains such as data science, machine learning, economitrics, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, reproducible research, phylogenetics, web technologies, hydrology, sports analytics, natural language processing, actuarial science, optimization, genomics, proteomics, metabolomics, transcriptomics, and other omics.

R packages (4302)

packageversionpackageversion
abc2.2.1abc.data1.1
ABCoptim0.15.0abcrf1.9
abglasso0.1.1abind1.4-8
abtest1.0.1accrualPlot1.0.7
acebayes1.10acepack1.4.2
ACNE0.9.1acp2.1
acs2.1.4ACSWR1.0
ActivePathways2.0.5actuar3.3-4
actuaRE0.1.5ActuarialM0.1.0
actuaryr1.1.1actxps1.5.0
ada2.0-5adagio0.9.2
adaptivetau2.3-2adaptMCMC1.5
adaptr1.4.0ADAPTS1.0.22
adaptsmoFMRI1.2adaptTest1.2
additivityTests1.1-4.2ade41.7-22
ade4TkGUI0.3-1adegenet2.1.10
adegraphics1.0-21adehabitatHR0.4.22
adehabitatHS0.3.18adehabitatLT0.3.28
adehabitatMA0.3.17adephylo1.1-16
adespatial0.3-24ADGofTest0.3
adimpro0.9.7.2adiv2.2.1
adjclust0.6.10adlift1.4-5
admisc0.36AdMit2.1.9
ads1.5-10AdvancedBasketballStats1.0.1
AER1.2-14affy1.82.0
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svDialogs1.1.0SVDNF0.1.11
svglite2.1.3svGUI1.0.1
svrep0.6.4svs3.1.1
svUnit1.0.6swagger5.17.14.1
sweep0.2.5swephR0.3.1
SwimmeR0.14.2swirl2.4.5
swirlify0.5.3switchr0.14.8
SWTools1.1.0sylly0.1-6
sym.arma1.0symengine0.2.6
symmoments1.2.1synchronicity1.3.10
SYNCSA1.3.4Synth1.1-8
synthACS1.7.1synthesis1.2.5
SynthETIC1.1.0synthpop1.8-0
sys3.4.3sysfonts0.8.9
systemfit1.1-30systemfonts1.1.0
table11.4.3tables0.9.31
tabnet0.6.0tabuSearch1.1.1
TAF4.2.0tagcloud0.6
TailRank3.2.2TAM4.2-21
tanaka0.4.0TAQMNGR2018.5-1
targets1.8.0tau0.0-26
taxize0.9.100tbea1.5.0
TBRDist1.0.2tbrf0.1.5
TCA1.2.1TCGAbiolinks2.32.0
TCGAbiolinksGUI.data1.24.0TCGAretriever1.9.1
TcGSA0.12.10tcltk21.2-11
Tcomp1.0.1tdigest0.4.2
TeachingDemos2.13teamcolors0.0.4
telegram.bot3.0.0tempdisagg1.1.1
tensor1.5tensorA0.36.2.1
tensorflow2.16.0tensorMiss1.1.1
TensorPreAve1.1.0tensorTS1.0.2
TEQR6.0-0tergm4.2.1
Ternary2.3.3terra1.7-83
terrainr0.7.5TESS2.1.2
tesseract5.2.2testcorr0.2.0
TestDataImputation2.3TestDesign1.7.0
tester0.2.0TestFunctions0.2.2
testit0.13TestScorer1.7.2
testthat3.2.1.1TexExamRandomizer1.2.7
texreg1.39.4text2vec0.6.4
textcat1.0-8textir2.0-5
textplot0.2.2textrank0.3.1
textreuse0.1.5textshaping0.4.0
textTinyR1.1.8textutils0.4-1
tfarima0.3.2tfautograph0.3.2
tfdatasets2.17.0tfhub0.8.1
tfio0.4.1TFisher0.2.0
tframe2015.12-1.1tfruns1.5.3
tgp2.4-23TGS1.0.1
TH.data1.1-2theft0.6.3
thief0.3ThreeGroups0.21
threejs0.3.3ThreeWay1.1.3
thurstonianIRT0.12.5tibble3.2.1
tibbletime0.1.8tictoc1.2.1
Tides2.1tidyBdE0.3.7
tidycensus1.6.7tidyestimate1.1.1
tidygraph1.3.1tidyhydat0.7.0
tidyLPA1.1.0tidymodels1.2.0
tidyquant1.0.9tidyr1.3.1
tidyREDCap1.1.2tidyRSS2.0.7
tidyselect1.2.1tidySEM0.2.7
tidysynth0.2.0tidyterra0.6.1
tidytext0.4.2tidytree0.4.6
tidyverse2.0.0tidyvpc1.5.1
tiff0.1-12tigris2.1
tikzDevice0.12.6timechange0.3.0
timeDate4041.110timeless0.2.3
timeSeries4041.111timeseriesdb1.0.0-1.1.2
timetk2.9.0timsac1.3.8-4
tinyarray2.4.2tinyProject0.6.1
tinytable0.5.0tinytex0.53
tis1.39tkrplot0.0-27
tkWidgets1.82.0TLMoments0.7.5.3
tm0.7-14tm.plugin.alceste1.1.1
tm.plugin.dc0.2-10tm.plugin.europresse1.4
tm.plugin.factiva1.8tm.plugin.lexisnexis1.4.1
tm.plugin.mail0.3-1tmap3.3-4
tmaptools3.1-1TMB1.9.15
Tmisc1.0.1tmod0.50.13
tmvnsim1.0-2tmvtnorm1.6
tnet3.0.16tokenizers0.3.0
tokenizers.bpe0.1.3topicdoc0.1.1
topicmodels0.2-17topicmodels.etm0.1.0
topmodel0.7.5topologyGSA1.5.0
toprdata1.0.2torch0.13.0
torchaudio0.3.1.9000torchdatasets0.3.1
torchvision0.6.0tpr0.3-3
tracerer2.2.3trackdem0.7.2
trackdf0.3.3trackdown1.1.1
trackeR1.6.0trackeRapp1.2
TrackReconstruction1.3tractor.base3.4.2
traipse0.3.0trajectories0.2-9
TrajectoryUtils1.12.0trajr1.5.1
transformr0.1.5transfR1.0.11
TransPhylo1.4.5trapezoid2.0-2
traudem1.0.3tree1.0-43
treebalance1.2.0treebase0.1.5
TreeBUGS1.5.0treedater0.5.0
TreeDist2.9.1treefit1.0.2
treeio1.28.0treemap2.4-4
TreeSearch1.5.1TreeSim2.4
treespace1.1.4.3TreeTools1.12.0
trend1.1.6trendeval0.1.0
trending0.1.0TrialSize1.4
triangle1.0triebeard0.4.1
trimcluster0.1-5trip1.10.0
tripack1.3-9.2tripEstimation0.0-46
TripleR1.5.4TruncatedNormal2.3
truncdist1.0-2truncnorm1.0-9
truncreg0.2-5trust0.1-8
trustOptim0.8.7.3tryCatchLog1.3.1
TSA1.3.1TSANN0.1.0
tsbox0.4.2tsBSS1.0.0
TSCAN1.42.0TSclust1.3.1
tscount1.4.3tsdataleaks2.1.1
tsdb1.1-0tsdecomp0.2
TSdeeplearning0.1.0tsdisagg20.1.0
TSdisaggregation2.0.0TSdist3.7.1
tsdistributions1.0.2tsDyn11.0.5.2
TSEAL0.1.3TSEntropies0.9
tseries0.10-58tseriesChaos0.1-13.1
tseriesEntropy0.7-2tseriesTARMA0.5-1
tsfeatures1.1.1tsfknn0.6.0
tsgarch1.0.3tsibble1.1.5
tsibbledata0.4.1tsibbletalk0.1.0
tsintermittent1.10tsiR0.4.3
TSLSTM0.1.0TSLSTMplus1.0.5
tsmethods1.0.2tsModel0.6-2
tsne0.1-3.1tsnet0.1.0
tsoutliers0.6-10TSP1.2-4
tsPI1.0.4TSrepr1.1.0
tsrobprep0.3.2tssim0.1.7
TSstudio0.1.7tstests1.0.1
TSTutorial1.2.7tsutils0.9.4
tswge2.1.0tth4.16-0
TTR0.24.4tufterhandout1.2.1
tune1.2.1TUWmodel1.1-1
tvm0.5.2twdtw1.0-1
tweedie2.3.5tweenr2.0.3
twosamples2.0.1TxDb.Hsapiens.UCSC.hg19.knownGene3.2.2
TxDb.Hsapiens.UCSC.hg38.knownGene3.18.0tximport1.32.0
txtq0.2.4tzdb0.4.0
uaparserjs0.3.5ubiquity2.0.3
ucminf1.2.2UComp5.0.4
UCSC.utils1.0.0udpipe0.8.11
ufRisk1.0.7ugatsdb0.2.3
uGMAR3.5.0umap0.2.10.0
uncmbb0.2.2unglue0.1.0
UnifiedDoseFinding0.1.10unifir0.2.4
units0.8-5univOutl0.4
unrepx1.0-2unrtf1.4.7
UpSetR1.4.0uptasticsearch0.4.0
urca1.3-4urlchecker1.0.1
urlshorteneR1.5.7urltools1.7.3
uroot2.1-3usdata0.3.1
usethis3.0.0usmap0.7.1
usmapdata0.3.0utf81.2.4
utility1.4.6uuid1.2-1
uwot0.2.2V86.0.0
VALERIE1.1.0validate1.1.5
validatetools0.5.2valr0.8.2
VAM1.1.0vapour0.10.0
VAR.etp1.1varbvs2.6-10
VARDetect0.1.8vardiag0.2-1
vardpoor0.20.1VaRES1.0.2
vars1.6-1VARshrink0.3.1
varycoef0.3.4VCA1.5.1
vcd1.4-13vcdExtra0.8-5
vcr1.6.0vctrs0.6.5
vdg1.2.3VedicDateTime0.1.9
vegan2.6-8vegawidget0.5.0
vegperiod0.4.0VennDiagram1.7.3
venneuler1.1-4VGAM1.1-12
VGAMdata1.1-12vglmer1.0.5
vhica0.2.8VIC50.2.6
VIM6.2.2VineCopula2.5.1
vines1.1.5vip0.4.1
viridis0.6.5viridisLite0.4.2
visNetwork2.1.2visualize4.5.0
vkR0.2volatilityTrader1.0.1
volcano3D2.0.9volleystat0.2.0
vpc1.2.2vroom1.6.5
vrtest1.2vsn3.72.0
W3CMarkupValidator0.1-7waiter0.2.5
waldo0.5.3warp0.2.1
washdata0.1.4WASP1.4.4
waterData1.0.8waterquality1.0.0
WaveletComp1.1wavelets0.3-0.2
waveslim1.8.5wavethresh4.7.3
wavScalogram1.1.3waywiser0.6.0
wbstats1.0.4wCorr1.9.8
WDI2.7.8wdm0.2.4
wdman0.2.6weatherOz1.0.0
WebAnalytics0.9.12webchem1.3.0
webdriver1.0.6WebGestaltR0.4.6
webmockr1.0.0webreadr0.4.0
webshot0.5.5webshot20.1.1
websocket1.4.2webutils1.2.2
wehoop2.1.0WeightedPortTest1.1
WeightIt1.3.1weights1.0.4
welo0.1.4WeMix4.0.3
WGCNA1.73WH1.1.2
whisker0.4.1whitebox2.4.0
whitening1.4.0whoami1.3.0
widgetframe0.3.1widgetTools1.82.0
WikidataQueryServiceR1.0.0WikidataR2.3.3
WikipediR1.7.1wikitaxa0.4.0
wildlifeDI1.0.0wilson2.4.2
windex2.0.8wINEQ1.2.1
withr3.0.2wk0.9.4
wktmo1.0.5wkutils0.1.3
wnl0.8.1wooldridge1.4-3
worcs0.1.15word2vec0.4.0
wordcloud2.6wordnet0.1-17
workflowr1.7.1workflows1.1.4
workflowsets1.1.0worldfootballR0.6.2
worldmet0.9.8worrms0.4.3
wpp20171.2-3wpp20191.1-1
wql1.0.1WrightMap1.4
writexl1.5.1WriteXLS6.7.0
wrMisc1.15.2wrProteo1.12.0
WRSS3.1wrswoR1.1.1
WRTDStidal1.1.4WufooR1.0.1
x121.10.3x13binary1.1.61
xaringan0.30XBRL0.99.19.1
xfun0.49xgboost1.7.8.1
xgxr1.1.2XLConnect1.1.0
xlsx0.6.5xlsxjars0.6.1
XML3.99-0.17xml21.3.6
XML2R0.0.8xmlrpc21.1
xopen1.0.1xplain0.2.2
xpose0.4.18xpose.nlmixr20.4.0
xpose44.7.3xslt1.4.6
xtable1.8-4xts0.14.1
XVector0.44.0xxIRT2.1.2
yaImpute1.0-34.1yaml2.3.10
yardstick1.3.1yesno0.1.3
yhatr0.15.1ympes1.6.0
yorkr0.0.42ypssc1.1.0
yuima1.15.27yulab.utils0.1.7
zeallot0.1.0zen4R0.10
zic0.9.1ZIM1.1.0
ZINARp0.1.0zip2.3.1
zipfR0.6-70zlib1.0.3
zlibbioc1.50.0zoo1.8-12
ZRA0.2ztable0.2.3
zTree1.0.7zyp0.11-1

RShiny Server

R: 4.4.1

rshiny-server: 1.5.22.1017

Release Notes

Upgraded the operating system from Ubuntu 20.04 to Ubuntu 22.04, and all R packages to their latest versions.

This AMI provides thousands of R packages covering various domains such as data science, machine learning, economitrics, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, reproducible research, phylogenetics, web technologies, hydrology, sports analytics, natural language processing, actuarial science, optimization, genomics, proteomics, metabolomics, transcriptomics, and other omics.

R packages (4293)

packageversionpackageversion
abc2.2.1abc.data1.1
ABCoptim0.15.0abcrf1.9
abglasso0.1.1abind1.4-5
abtest1.0.1accrualPlot1.0.7
acebayes1.10acepack1.4.2
ACNE0.9.1acp2.1
acs2.1.4ACSWR1.0
ActivePathways2.0.5actuar3.3-4
actuaRE0.1.5ActuarialM0.1.0
actuaryr1.1.1actxps1.5.0
ada2.0-5adagio0.9.2
adaptivetau2.3-1adaptMCMC1.5
adaptr1.4.0ADAPTS1.0.22
adaptsmoFMRI1.2adaptTest1.2
additivityTests1.1-4.2ade41.7-22
ade4TkGUI0.3-1adegenet2.1.10
adegraphics1.0-21adehabitatHR0.4.21
adehabitatHS0.3.17adehabitatLT0.3.27
adehabitatMA0.3.16adephylo1.1-16
adespatial0.3-23ADGofTest0.3
adimpro0.9.7adiv2.2.1
adjclust0.6.9adlift1.4-5
admisc0.35AdMit2.1.9
ads1.5-10AdvancedBasketballStats1.0.1
AER1.2-12affy1.82.0
affyio1.74.0africamonitor0.2.4
agricolae1.3-7agricolaeplotr0.5.0
agridat1.23agriwater1.0.2
agvgd0.1.2AhoCorasickTrie0.1.2
aion1.0.4airGR1.7.6
airGRdatasets0.2.1airGRdatassim0.1.3
airGRiwrm0.6.2airGRteaching0.3.3
airports0.1.0airr1.5.0
ajv1.0.0akima0.6-3.4
alabama2023.1.0alakazam1.3.0
aLFQ1.3.6AlgDesign1.2.1
aliases2entrez0.1.2almanac1.0.0
alpaca0.3.4alphavantager0.1.3
altair4.2.3ALTopt0.1.2
Amelia1.8.2ammiBayes1.0-2
ampir1.1.0AMR2.1.1
anabel3.0.1AnaCoDa0.1.4.4
anacor1.1-4analogsea1.0.7.2
analogue0.17-6anesrake0.80
animation2.7anipaths0.10.3
anMC0.2.5annotate1.82.0
AnnotationBustR1.3.0AnnotationDbi1.66.0
AnnuityRIR1.0-0Anthropometry1.19
anytime0.3.9ao1.1.0
aod1.3.3aoos0.5.0
AovBay0.1.0apc2.0.0
apcluster1.4.13ape5.8
apex1.0.6APFr1.0.2
aphid1.3.5aphylo0.3-3
apisensr1.0.0aplot0.2.3
apollo0.3.3approximator1.2-8
apsimx2.7.7ARCensReg3.0.1
arcgislayers0.3.0arcgisutils0.3.0
archetypes2.2-0.1archive1.1.8
archivist2.3.6arcpbf0.1.4
ArDec2.1-1ARDL0.2.4
ardl.nardl1.3.0areal0.1.8
arfima1.8-1argo3.0.2
argparse2.2.3arima23.1.0
arkhe1.7.0arm1.14-4
aroma.affymetrix3.2.2aroma.apd0.7.0
aroma.cn1.7.1aroma.core3.3.1
aroma.light3.34.0arpr0.1.2
arrangements1.1.9arrow16.1.0
ars0.7arsenal3.6.3
aRxiv0.10ascii2.6
asd2.2ash1.0-15
ashr2.2-63AsioHeaders1.22.1-2
askpass1.2.0aspect1.0-6
ASSA2.0assertthat0.2.1
AssetCorr1.0.4astsa2.1
asymmetry2.0.4ata1.1.1
atom4R0.3-3atRisk0.1.0
attempt0.3.1attention0.4.0
AUC0.3.2audio0.1-11
autoFRK1.4.3autoimage2.2.3
automap1.1-9autostsm3.1.5
av0.9.0aweek1.0.3
aws2.5-5aws.signature0.6.0
awsMethods1.1-1AzureAppInsights0.3.1
AzureAuth1.3.3AzureCognitive1.0.1
AzureContainers1.3.2AzureCosmosR1.0.0
AzureGraph1.3.4AzureKusto1.1.3
AzureQstor1.0.1AzureRMR2.4.4
AzureStor3.7.0AzureTableStor1.0.0
AzureVision1.0.2AzureVM2.2.2
babelgene22.9babelwhale1.2.0
babette2.3.4BACCO2.1-0
BACCT1.0backports1.5.0
backtest0.3-4bacondecomp0.1.1
baggr0.7.8bain0.2.11
BalancedSampling2.0.6BaM1.0.3
bama1.3.0bamdit3.4.1
bamlss1.2-4BAMMtools2.1.11
bang1.0.4BANOVA1.2.1
BarcodingR1.0-3BART2.9.9
bartCause1.0-8bartcs1.2.2
bartMachine1.3.4.1bartMachineJARs1.2.1
BAS1.7.1basad0.3.0
base642.0.1base64enc0.1-3
base64url1.4baseballr1.6.0
basicMCMCplots0.2.7BASiNET0.0.5
BaSkePro1.1.1BasketballAnalyzeR0.5.0
BASS1.3.1BatchExperiments1.4.3
BatchJobs1.9batchmeans1.0-4
BAwiR1.3.2baycn1.2.0
bayefdr0.2.1bayes4psy1.2.12
bayesAB1.1.3bayesammi0.1.0
bayesanova1.6BayesARIMAX0.1.1
BayesBinMix1.4.1bayesbio1.0.0
bayesboot0.2.2BayesBP1.1
BayesCACE1.2.3BayesCombo1.0
BayesComm0.1-2bayescopulareg0.1.3
bayescount0.9.99-9BayesCR2.1
bayesCT0.99.3BayesCTDesign0.6.1
BayesDA2012.04-1bayesDccGarch3.0.4
bayesdfa1.3.3bayesdistreg0.1.0
bayesDP1.3.6BayesFactor0.9.12-4.7
BayesFM0.1.7bayesforecast1.0.1
bayesGAM0.0.2bayesGARCH2.1.10
BayesGOF5.2BayesGPfit1.1.0
BayesGWQS0.1.1bayesian1.0.1
bayesianETAS1.0.3BayesianFactorZoo0.0.0.2
Bayesiangammareg0.1.0BayesianGLasso0.2.0
BayesianLaterality0.1.2BayesianNetwork0.3.2
BayesianTools0.1.8bayesianVARs0.1.3
bayesImageS0.6-1BayesLCA1.9
bayesLife5.2-0BayesLN0.2.10
BayesLogit2.1bayeslongitudinal0.1.0
bayesm3.1-6BayesMallows2.2.1
BayesMassBal1.1.0bayesmeta3.4
bayesmix0.7-6bayesnec2.1.2.0
bayesplot1.11.1bayesQR2.4
bayesRecon0.3.0bayestestR0.14.0
bayesTFR7.4-2BayesTools0.2.17
BayesTree0.3-1.5BayesVarSel2.2.5
BayesX0.3-3BAYSTAR0.2-10
baytrends2.0.12BB2019.10-1
BBmisc1.13bbmle1.0.25.1
bbotk1.0.1BCBCSF1.0-1
BCC19970.1.1BClustLonG0.1.3
bcpa1.3.2bcrm0.5.4
BDgraph2.72bdrc1.1.0
bdsmatrix1.3-7BE0.2.4
beachmat2.20.0beadarray2.54.0
BeadDataPackR1.56.0beakr0.4.3
bearishTrader1.0.2beastier2.5.1
beautier2.6.12BED1.5.2
beepr2.0beeswarm0.4.0
benchmarkme1.0.8benchmarkmeData1.0.4
BenfordTests1.2.0bentcableAR0.3.1
Bergm5.0.7Bernadette1.1.5
berryFunctions1.22.5Bessel0.6-1
BetaBit2.2betafunctions1.9.0
betapart1.6betareg3.2-0
betategarch3.3BETS0.4.9
bets.covid191.0.0beyondWhittle1.2.1
bezier1.1.2bfast1.6.1
BGLR1.1.2BGVAR2.5.7
bgw0.1.3BH1.84.0-0
BHH22016.05.31BiasCorrector0.2.2
BiasedUrn2.0.12bibtex0.5.1
biclust2.0.3.1bidask2.0.4
bife0.7.2BIFIEsurvey3.6-6
biganalytics1.1.22bigchess1.9.1
bigD0.2.0bigleaf0.8.2
biglm0.9-3bigmemory4.6.4
bigmemory.sri0.1.8bigrquery1.5.1
bigsplines1.1-1bigtime0.2.3
BigVAR1.1.2bimets4.0.2
bindr0.1.1bindrcpp0.2.3
binhf1.0-3binman0.1.3
binom1.1-1.1binr1.1.1
binseqtest1.0.4bio3d2.4-4
Biobase2.64.0BiocFileCache2.12.0
BiocGenerics0.50.0BiocIO1.14.0
BiocManager1.30.23BiocParallel1.38.0
BiocSingular1.20.0BiocVersion3.19.1
BioInsight0.3.1biomaRt2.60.1
biomartr1.0.7biomformat1.32.0
bioseq0.1.4Biostrings2.72.1
biotic0.1.2bipartite2.20
birtr1.0.0BisqueRNA1.0.5
bit4.0.5bit644.0.5
bitops1.0-8biwavelet0.20.21
bizdays1.0.16bkmr0.2.2
blaise1.3.11blastula0.3.5
blavaan0.5-5blink1.1.0
BLModel1.0.2blob1.2.4
blocklength0.1.5blockmatrix1.0
blockrand1.5blocksdesign4.9
blockTools0.6.4blogdown1.19
BLR1.6BLRPM1.0
BMA3.18.17bmgarch2.0.0
BMisc1.4.6bmixture1.7
BMS0.3.5BMTAR0.1.1
bnlearn5.0BNPTSclust2.0
BNSP2.2.3bnstruct1.0.15
boa1.1.8-2boilerpipeR1.3.2
BOIN2.7.2boiwsa1.1.1
bold1.3.0Bolstad0.2-41
Bolstad21.0-29bondAnalyst1.0.1
bookdown0.40Boom0.9.15
BoomSpikeSlab1.2.6bootnet1.6
BootPR1.0bootstrap2019.6
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waterData1.0.8waterquality1.0.0
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waveslim1.8.5wavethresh4.7.2
wavScalogram1.1.3waywiser0.6.0
wbstats1.0.4wCorr1.9.8
WDI2.7.8wdm0.2.4
wdman0.2.6weatherOz1.0.0
WebAnalytics0.9.12webchem1.3.0
webdriver1.0.6WebGestaltR0.4.6
webmockr1.0.0webreadr0.4.0
webshot0.5.5webshot20.1.1
websocket1.4.2webutils1.2.0
wehoop2.1.0WeightedPortTest1.1
WeightIt1.2.0weights1.0.4
welo0.1.4WeMix4.0.3
WGCNA1.72-5WH1.1.1
whisker0.4.1whitebox2.4.0
whitening1.4.0whoami1.3.0
widgetframe0.3.1widgetTools1.82.0
WikidataQueryServiceR1.0.0WikidataR2.3.3
WikipediR1.7.1wikitaxa0.4.0
wildlifeDI1.0.0wilson2.4.2
windex2.0.8wINEQ1.2.0
withr3.0.1wk0.9.2
wktmo1.0.5wkutils0.1.3
wnl0.8.1wooldridge1.4-3
worcs0.1.14word2vec0.4.0
wordcloud2.6wordnet0.1-17
workflowr1.7.1workflows1.1.4
workflowsets1.1.0worldfootballR0.6.2
worldmet0.9.8worrms0.4.3
wpp20171.2-3wpp20191.1-1
wql1.0.1WrightMap1.3
writexl1.5.0WriteXLS6.7.0
wrMisc1.15.1wrProteo1.12.0
WRSS3.1wrswoR1.1.1
WRTDStidal1.1.4WufooR1.0.1
x121.10.3x13binary1.1.61
xaringan0.30XBRL0.99.19.1
xfun0.46xgboost1.7.8.1
xgxr1.1.2XLConnect1.0.10
xlsx0.6.5xlsxjars0.6.1
XML3.99-0.17xml21.3.6
XML2R0.0.8xmlrpc21.1
xopen1.0.1xplain0.2.2
xpose0.4.18xpose.nlmixr20.4.0
xpose44.7.3xslt1.4.5
xtable1.8-4xts0.14.0
XVector0.44.0xxIRT2.1.2
yaImpute1.0-34yaml2.3.10
yardstick1.3.1yesno0.1.3
yhatr0.15.1yorkr0.0.42
ypssc1.1.0yuima1.15.27
yulab.utils0.1.5zeallot0.1.0
zen4R0.10zic0.9.1
ZIM1.1.0ZINARp0.1.0
zip2.3.1zipfR0.6-70
zlib1.0.3zlibbioc1.50.0
zoo1.8-12ZRA0.2
ztable0.2.3zTree1.0.7
zyp0.11-1

RShiny Server

R: 4.4.0

rshiny-server: 1.5.22.1017

CUDA Version: 11.7

GPU Driver Version: 515.43.04

Release Notes

Upgraded R to version 4.4.0 and all R packages to their latest versions.

This AMI provides thousands of R packages covering various domains such as data science, machine learning, economitrics, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, reproducible research, phylogenetics, web technologies, hydrology, sports analytics, natural language processing, actuarial science, optimization, genomics, proteomics, metabolomics, transcriptomics, and other omics.

R packages (4170)

packageversionpackageversion
abc2.2.1abc.data1.1
ABCoptim0.15.0abcrf1.9
abglasso0.1.1abind1.4-5
abtest1.0.1accrualPlot1.0.7
acebayes1.10acepack1.4.2
acp2.1acs2.1.4
ACSWR1.0ActivePathways2.0.3
actuar3.3-4actuaRE0.1.5
ActuarialM0.1.0actuaryr1.1.1
actxps1.4.0ada2.0-5
adagio0.9.2adaptivetau2.3-1
adaptMCMC1.5adaptr1.3.2
ADAPTS1.0.22adaptsmoFMRI1.2
adaptTest1.2additivityTests1.1-4.1
ade41.7-22ade4TkGUI0.3-1
adegenet2.1.10adegraphics1.0-21
adehabitatHR0.4.21adehabitatHS0.3.17
adehabitatLT0.3.27adehabitatMA0.3.16
adephylo1.1-16ADGofTest0.3
adimpro0.9.6adiv2.2.1
adjclust0.6.9admisc0.35
AdMit2.1.9ads1.5-10
AdvancedBasketballStats1.0.1AER1.2-12
affy1.78.0affyio1.70.0
africamonitor0.2.4agricolae1.3-7
agricolaeplotr0.5.0agridat1.23
agriwater1.0.2agvgd0.1.2
AhoCorasickTrie0.1.2airGR1.7.6
airGRdatassim0.1.3airGRiwrm0.6.2
airGRteaching0.3.2airports0.1.0
airr1.5.0ajv1.0.0
akima0.6-3.4alabama2023.1.0
alakazam1.3.0aLFQ1.3.6
AlgDesign1.2.1aliases2entrez0.1.2
almanac1.0.0alpaca0.3.4
alphavantager0.1.3ALTopt0.1.2
Amelia1.8.2AmericanCallOpt0.95
ammiBayes1.0-2ampir1.1.0
AMR2.1.1anabel3.0.1
AnaCoDa0.1.4.4anacor1.1-4
analogsea1.0.7.2anesrake0.80
animation2.7anipaths0.10.3
anMC0.2.5annotate1.78.0
AnnotationBustR1.3.0AnnotationDbi1.62.1
AnnuityRIR1.0-0Anthropometry1.19
anytime0.3.9ao0.3.3
aod1.3.3aoos0.5.0
AovBay0.1.0apc2.0.0
apcluster1.4.12ape5.8
APFr1.0.2aphid1.3.5
aphylo0.3-3aplot0.2.2
apollo0.3.2approximator1.2-8
apt3.0ARCensReg3.0.1
arcgislayers0.2.0arcgisutils0.2.0
ArchaeoChron0.1ArchaeoPhases1.8
archetypes2.2-0.1archivist2.3.6
ArDec2.1-1ARDL0.2.4
ardl.nardl1.3.0areal0.1.8
arfima1.8-1argparse2.2.3
arm1.14-4aroma.apd0.7.0
arpr0.1.2arrangements1.1.9
arrow15.0.1ars0.7
aRxiv0.10ascii2.6
asd2.2ash1.0-15
ashr2.2-63AsioHeaders1.22.1-2
askpass1.2.0aspect1.0-6
ASSA2.0assertive.base0.0-9
assertive.files0.0-2assertive.numbers0.0-2
assertthat0.2.1AssetCorr1.0.4
astrochron1.2astsa2.1
asymmetry2.0.4ata1.1.1
atom4R0.3-3atRisk0.1.0
aTSA3.1.2.1attempt0.3.1
attention0.4.0AUC0.3.2
audio0.1-11autoFRK1.4.3
autoimage2.2.3automap1.1-9
autostsm3.1.4av0.9.0
aweek1.0.3aws2.5-5
aws.signature0.6.0awsMethods1.1-1
AzureAuth1.3.3AzureCognitive1.0.1
AzureContainers1.3.2AzureCosmosR1.0.0
AzureGraph1.3.4AzureKusto1.1.3
AzureQstor1.0.1AzureRMR2.4.4
AzureStor3.7.0AzureTableStor1.0.0
AzureVision1.0.2AzureVM2.2.2
babelgene22.9babelwhale1.2.0
BACCO2.1-0BACCT1.0
backports1.4.1backtest0.3-4
bacondecomp0.1.1baggr0.7.8
bain0.2.10BalancedSampling2.0.6
BaM1.0.3bama1.3.0
bamdit3.4.0bamlss1.2-3
BAMMtools2.1.11bang1.0.3
BANOVA1.2.1BarcodingR1.0-3
BART2.9.7bartBMA1.0
bartCause1.0-6bartMachine1.3.4.1
bartMachineJARs1.2.1BAS1.7.1
basad0.3.0base642.0.1
base64enc0.1-3base64url1.4
baseballDBR0.1.2basicMCMCplots0.2.7
BASiNET0.0.5BaSkePro1.1.1
BasketballAnalyzeR0.5.0BASS1.3.1
BatchExperiments1.4.3BatchJobs1.9
batchmeans1.0-4BAwiR1.3.2
baycn1.2.0bayefdr0.2.1
bayes4psy1.2.12bayesAB1.1.3
bayesammi0.1.0bayesanova1.6
BayesARIMAX0.1.1BayesBinMix1.4.1
bayesbio1.0.0bayesboot0.2.2
BayesBP1.1bayesbr0.0.1.0
BayesCACE1.2.3BayesCombo1.0
BayesComm0.1-2bayescopulareg0.1.3
bayescount0.9.99-9BayesCR2.1
bayesCT0.99.3BayesCTDesign0.6.1
BayesDA2012.04-1bayesDccGarch3.0.4
bayesdfa1.3.3bayesdistreg0.1.0
bayesDP1.3.6BayesFactor0.9.12-4.7
BayesFM0.1.5bayesforecast1.0.1
bayesGAM0.0.2bayesGARCH2.1.10
BayesGOF5.2BayesGPfit1.1.0
BayesGWQS0.1.1bayesian0.0.9
bayesianETAS1.0.3Bayesiangammareg0.1.0
BayesianGLasso0.2.0BayesianLaterality0.1.2
BayesianNetwork0.3BayesianTools0.1.8
bayesImageS0.6-1BayesLCA1.9
bayesLife5.2-0bayeslincom1.3.0
BayesLN0.2.10BayesLogit2.1
bayesloglin1.0.1bayeslongitudinal0.1.0
bayesm3.1-6BayesMallows2.2.1
BayesMassBal1.1.0bayesmeta3.4
bayesmix0.7-6bayesnec2.1.2.0
bayesplot1.11.1bayesQR2.4
BayesSAE1.0-2bayestestR0.13.2
bayesTFR7.4-2BayesTools0.2.17
BayesTree0.3-1.5BayesVarSel2.2.5
BayesX0.3-3BAYSTAR0.2-10
baytrends2.0.11BB2019.10-1
BBmisc1.13bbmle1.0.25.1
bbotk0.8.0BCBCSF1.0-1
BCC19970.1.1BCE2.2.0
Bchron4.7.6BClustLonG0.1.3
bcp4.0.3bcpa1.3.2
bcrm0.5.4BDgraph2.72
bdrc1.1.0bdsmatrix1.3-7
BE0.2.4beachmat2.16.0
beadarray2.50.0BeadDataPackR1.52.0
beakr0.4.3bearishTrader1.0.2
BED1.5.0beepr1.3
beeswarm0.4.0benchmarkme1.0.8
benchmarkmeData1.0.4BenfordTests1.2.0
bentcableAR0.3.1Bergm5.0.7
berryFunctions1.22.5Bessel0.6-0
BEST0.5.4BetaBit2.2
betafunctions1.9.0betapart1.6
betareg3.1-4betategarch3.3
BETS0.4.9bets.covid191.0.0
beyondWhittle1.2.1bezier1.1.2
bfast1.6.1BFpack1.2.3
BGGM2.1.1BGLR1.1.2
BGVAR2.5.5bgw0.1.3
BH1.84.0-0BHH22016.05.31
BiasCorrector0.2.2BiasedUrn2.0.11
bibtex0.5.1biclust2.0.3.1
bidask2.0.2bife0.7.2
BIFIEsurvey3.5-19biganalytics1.1.22
bigchess1.9.1bigD0.2.0
bigleaf0.8.2biglm0.9-2.1
bigmemory4.6.4bigmemory.sri0.1.8
bigrquery1.5.1bigsplines1.1-1
bigtime0.2.3BigVAR1.1.2
bimets3.0.2bindr0.1.1
bindrcpp0.2.3binman0.1.3
binom1.1-1.1binomSamSize0.1-5
binr1.1.1binseqtest1.0.4
bio3d2.4-4Biobase2.60.0
BiocFileCache2.8.0BiocGenerics0.46.0
BiocIO1.10.0BiocManager1.30.22
BiocParallel1.34.1BiocSingular1.16.0
BiocVersion3.17.1bioinactivation1.2.3
BioInsight0.3.1biomaRt2.56.1
biomartr1.0.7biomformat1.28.0
bioOED0.2.1bioseq0.1.4
Biostrings2.68.0biotic0.1.2
bipartite2.19birtr1.0.0
BisqueRNA1.0.5bit4.0.5
bit644.0.5bitops1.0-7
biwavelet0.20.21bizdays1.0.16
bkmr0.2.2blaise1.3.11
blastula0.3.5blavaan0.5-4
BLModel1.0.2blob1.2.4
blocklength0.1.5blockmatrix1.0
blockrand1.5blocksdesign4.9
blockTools0.6.4blogdown1.19
BLR1.6BMA3.18.17
bmgarch2.0.0BMisc1.4.6
bmixture1.7BMS0.3.5
BMTAR0.1.1bnlearn4.9.3
BNPTSclust2.0BNSP2.2.3
bnstruct1.0.15boa1.1.8-2
boilerpipeR1.3.2BOIN2.7.2
bold1.3.0Bolstad0.2-41
Bolstad21.0-29bondAnalyst1.0.1
bookdown0.39Boom0.9.15
BoomSpikeSlab1.2.6bootnet1.6
BootPR1.0bootstrap2019.6
bootUR1.0.3BoSSA3.7
boussinesq1.0.6boxr0.3.6
bpca1.3-6bqtl1.0-36
BradleyTerry21.1-2brainR1.6.0
brandwatchR0.3.0breakfast2.3
brew1.0-10brglm0.7.2
brglm20.9.2bridgesampling1.1-2
BRINDA0.1.5brio1.1.5
brms2.21.0Brobdingnag1.2-9
broman0.80broom1.0.5
broom.helpers1.15.0brotli1.3.0
bsam1.1.3bsamGP1.2.5
BSgenome1.68.0bslib0.7.0
BsMD2023.920bspec1.6
bspmma0.1-2bssm2.0.2
BSSprep0.1bsts0.9.10
bsvars2.1.0BTLLasso0.1-13
BTM0.3.7bullishTrader1.0.1
bundesbank0.1-12BurStFin1.3
BurStMisc1.1BVAR1.0.5
bvartools0.2.4bvls1.4
C500.1.8ca0.71.1
cabinets0.6.0cabootcrs2.1.0
cachem1.0.8cacIRT1.4
CADFtest0.3-3caffsim0.2.2
Cairo1.6-2CALANGO1.0.16
calculus1.0.1calibrate1.7.7
CalibrateSSB1.3.0calibrator1.2-8
callr3.7.6cancensus0.5.7
candisc0.8-6canprot2.0.0
CANSIM2R1.14.1caper1.0.3
captr0.3.0capushe1.1.2
car3.1-2caRamel1.3
CARBayes6.1.1CARBayesdata3.0
CARBayesST4.0carData3.0-5
caret6.0-94carfima2.0.2
caribou1.1-1carrier0.1.1
cartogram0.3.0Cascade2.1
CascadeData1.4CAST1.0.0
castor1.8.0cate1.1.1
caTools1.18.2catR3.17
causact0.5.5CausalImpact1.3.0
CAvariants6.0CB21.3.4
cbioportalR1.1.0cbsodataR1.0.1
ccaPP0.3.3cccp0.3-1
cdlTools1.13CDM8.2-6
CDNmoney2012.4-2cds1.0.3
CellNOptR1.46.0cellranger1.1.0
censReg0.5-36censusapi0.8.0
CEoptim1.3CePa0.8.0
CeRNASeek2.1.3cfbfastR1.9.0
CFtime1.3.0ChainLadder0.2.18
chandwich1.1.6changepoint2.2.4
changepoint.geo1.0.2changepoint.np1.0.5
checkLuhn1.1.0checkmate2.3.1
checkpoint1.0.2chem.databases1.0.0
ChemoSpec6.1.10ChemoSpecUtils1.0.4
cherryblossom0.1.0chess1.0.1
chilemapas0.3.0chk0.9.1
CHNOSZ2.1.0choiceDes0.9-3
CholWishart1.1.2choroplethr3.7.3
choroplethrMaps1.0.1chromoMap4.1.1
chromote0.2.0chron2.3-61
cifti0.4.5cinterpolate1.0.1
circlize0.4.16CircSpaceTime0.9.0
CircStats0.2-6circular0.5-0
ciTools0.6.1Ckmeans.1d.dp4.3.5
Claddis0.6.3clarabel0.5.1
clarifai0.4.2classInt0.4-10
cli3.6.2clifro3.2-5
climatol4.1.0clime0.5.0
clinDR2.4.1clinfun1.1.5
clinicalsignificance2.0.0clinPK0.13.0
clinsig1.2clipr0.8.0
clisymbols1.2.0clmplus0.1.0
clock0.7.0clubSandwich0.5.10
clue0.3-65clustDRM0.1-0
clusterGeneration1.3.8clusterPower0.7.0
clusterSEs2.6.5clustMixType0.3-14
ClustVarLV2.1.1clv0.3-2.4
cmaes1.0-12cmaesr1.0.3
CMLS1.0-1cmm1.0
cmocean0.3-1cmprsk2.2-11
cmrutils1.3.1cNORM3.0.4
CNORode1.42.0coalescentMCMC0.4-4
coalitions0.6.24coarseDataTools0.6-6
cobalt4.5.5cobs1.3-8
coconots1.1.3COCONUT1.0.2
cocor1.1-4cocorresp0.4-4
cocron1.0-1coda0.19-4.1
cOde1.1.1coin1.4-3
cointReg0.2.0colf0.1.3
collapse2.0.13collapsibleTree0.1.8
collections0.3.7colorr1.0.0
colorRamps2.3.4colorspace2.1-0
colourpicker1.3.0colourvalues0.3.9
combinat0.0-8combinedevents0.1.1
CombinS1.1-1ComICS1.0.4
CommonJavaJars1.1-0commonmark1.9.1
compare0.2-6compas0.1.1
CompQuadForm1.4.3comprehenr0.6.10
conditionz0.1.0coneproj1.17
conf.design2.0.0config0.3.2
confintr1.0.2conflicted1.2.0
conquer1.3.3conquestr1.3.0
contactdata1.0.0contfrac1.1-12
convevol2.0.1convey1.0.0
coop0.6-3cops1.3-1
copula1.1-3copulaData0.0-2
copulaedas1.4.3cordillera1.0-0
corHMM2.8coro1.0.4
corona0.3.0coronavirus0.4.1
corpcor1.6.10corpora0.6
corporaexplorer0.8.6corrgram1.14
corrplot0.92cosa2.1.0
CoSMoS2.1.0costat2.4.1
countrycode1.6.0CovCombR1.0
COVID193.0.3covid19.analytics2.1.3.3
covid19br0.1.8covid19dbcand0.1.1
covid19france0.1.0covid19italy0.3.1
covid19sf0.1.2covid19swiss0.1.0
covid19us0.1.9CovidMutations0.1.3
cowplot1.1.3cp4p0.3.6
CPBayes1.1.0cpk1.3-1
cplm0.7-12cpp110.4.7
CRABS1.2.0crawl2.3.0
crayon1.5.2crch1.1-2
credentials2.0.1credule0.1.4
crfsuite0.4.2cricketdata0.2.3
cricketr0.0.26CRM1.2.4
crmPack1.0.5crossdes1.1-2
Crossover0.1-22crosstalk1.2.1
crs0.15-37crseEventStudy1.2.2
crsmeta0.3.0crul1.4.2
crunch1.30.4crunchy0.3.3
cSEM0.5.0CSGo0.6.7
cshapes2.0csodata1.4.2
cstab0.2-2csv0.6.2
ctbi2.0.5ctmcmove1.2.9
ctmm1.2.0ctrdata1.17.2
ctsem3.9.1ctsemOMX1.0.6
CTT2.3.3CTTShiny0.1
ctv0.9-5cubature2.1.0
cubble0.3.0cubelyr1.0.2
cubfits0.1-4Cubist0.4.2.1
cumSeg1.3curl5.2.1
cvar0.5cvAUC1.1.4
CVST0.2-3CVXR1.0-12
d3Network0.5.2.1DAAG1.25.4
dae3.2.25daewr1.2-11
dagitty0.3-4DAKS2.1-3
DALEX2.4.3DAMOCLES2.3
data.table1.15.4data.tree1.1.0
DatabaseConnector6.3.2DataExplorer0.8.3
dataone2.2.2datapack1.4.1
datapasta3.1.0dataRetrieval2.7.15
datarobot2.18.6dataseries0.2.0
dataverse0.3.13datawizard0.10.0
date1.2-42dateback1.0.4
datetimeutils0.6-4dbarts0.9-26
dbhydroR0.2-8DBI1.2.2
DBItest1.8.1dbmss2.9-0
dbparser2.0.3dbplyr2.5.0
dbscan1.1-12dbx0.3.1
DChaos0.1-7dclone2.3-2
DCluster0.2-10DClusterm1.0-1
dcov0.1.1dCovTS1.4
dcurver0.9.2ddalpha1.3.15
DDD5.2.2dde1.0.5
DDPM0.1.0deBInfer0.4.4
debugme1.1.0decompr6.4.0
deducorrect1.3.7deductive1.0.0
DeductiveR1.0.0deeptime1.1.1
Delaporte8.4.0DelayedArray0.26.7
DelayedMatrixStats1.22.6deldir2.0-4
deltaPlotR1.6demography2.0
dendextend1.17.1dendsort0.3.4
densEstBayes1.0-2.2DEoptim2.2-8
DEoptimR1.1-3depmix0.9.16
depmixS41.5-0DepthProc2.1.5
depthTools0.7Deriv4.1.3
derivmkts0.2.5desc1.4.3
DescTools0.99.54DESeq21.40.2
designmatch0.5.4desiR1.2.2
desirability2.1deSolve1.40
desplot1.10devtools2.4.5
dexter1.4.2dextergui0.2.6
dexterMST0.9.6dfcomb3.1-1
dfcrm0.2-2.1dfidx0.0-5
DFIT1.1dfms0.2.1
dfmta1.7-3dfoptim2023.1.0
dfped1.1dfpk3.5.1
DGEobj1.1.2DGEobj.utils1.0.6
DHARMa0.4.6DHS.rates0.9.2
diagis0.2.3diagonals6.4.0
diagram1.6.5DiagrammeR1.0.11
dials1.2.1DiceDesign1.10
DiceEval1.6.1DiceKriging1.6.0
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StanMoMo1.2.0stargazer5.2.3
starma1.3stars0.6-5
starter0.1.15STARTS1.3-8
startupmsg0.9.6.1statcanR0.2.6
statcodelists0.9.2statebins1.4.0
statespacer0.5.0stationaRy0.5.1
statip0.2.3StatMatch1.4.1
statmod1.5.0statnet.common4.9.0
StatRank0.0.6steadyICA1.0
SteinIV0.1-1STFTS0.1.0
stinepack1.5stlplus0.5.1
stm1.3.7STMedianPolish0.2
StMoMo0.4.1stochprofML2.0.3
stochQN0.1.2-1stochvol3.2.4
stockAnalyst1.0.1stopwords2.3
storr1.2.5stplanr1.1.2
stR0.6strand0.2.0
strap1.6-0stratification2.2-7
streamDepletr0.2.0streamR0.4.5
stringdist0.9.12stringfish0.16.0
stringi1.8.3stringmagic1.1.0
stringr1.5.1strucchange1.5-3
strucchangeRcpp1.5-3-1.0.4StructuralDecompose0.1.1
styler1.10.3subplex1.8
subscore3.3sufficientForecasting0.1.0
sugrrants0.2.9SummarizedExperiment1.30.2
summclust0.7.2suntools1.0.0
supclust1.1-1SuperLearner2.0-29
superml0.5.7superpc1.12
SuppDists1.1-9.7support.CEs0.7-0
surface0.5SurrogateRegression0.6.0.1
suRtex0.9survcomp1.50.0
surveillance1.22.1survey4.4-2
surveybootstrap0.0.3surveydata0.2.7
surveyoutliers0.1surveyplanning4.0
surveysd1.3.1survival6660.5
survivalROC1.0.3.1survminer0.4.9
survMisc0.5.6survPresmooth1.1-11
sva3.48.0svars1.3.11
svd0.5.5svDialogs1.1.0
SVDNF0.1.8svglite2.1.3
svGUI1.0.1svrep0.6.3
svs3.0.0svUnit1.0.6
swagger3.33.1swephR0.3.1
SwimmeR0.14.2swirl2.4.5
swirlify0.5.3switchr0.14.8
sylly0.1-6sym.arma1.0
symengine0.2.6symmoments1.2.1
SYNCSA1.3.4Synth1.1-8
synthACS1.7.1synthesis1.2.4
SynthETIC1.1.0synthpop1.8-0
sys3.4.2sysfonts0.8.9
systemfit1.1-30systemfonts1.0.6
table11.4.3tables0.9.25
tabnet0.5.0tabuSearch1.1.1
TAF4.2.0tagcloud0.6
TailRank3.2.2TAM4.2-21
TAQMNGR2018.5-1targets1.7.0
tau0.0-25taxize0.9.100
TBRDist1.0.2tbrf0.1.5
TCA1.2.1TcGSA0.12.10
tcltk21.2-11Tcomp1.0.1
tdigest0.4.1TeachingDemos2.13
teamcolors0.0.4telegram.bot3.0.0
telemac0.1.1tempdisagg1.1.1
tensor1.5tensorA0.36.2.1
tensorflow2.16.0TensorPreAve1.1.0
tensorTS1.0.1TEQR6.0-0
tergm4.2.0Ternary2.3.1
terra1.7-71TESS2.1.2
tesseract5.2.1testcorr0.2.0
TestDataImputation2.3TestDesign1.6.1
tester0.2.0TestFunctions0.2.1
testit0.13TestScorer1.7.2
testthat3.2.1.1TexExamRandomizer1.2.7
texreg1.39.3text2vec0.6.4
textcat1.0-8textir2.0-5
textplot0.2.2textrank0.3.1
textreuse0.1.5textshaping0.3.7
textTinyR1.1.8tfarima0.3.2
tfautograph0.3.2tfdatasets2.9.0
tfio0.4.1TFisher0.2.0
tfplot2021.6-1tframe2015.12-1.1
tfruns1.5.3tgp2.4-22
TH.data1.1-2theft0.6.1
thief0.3ThreeArmedTrials1.0-4
threeBrain1.0.1ThreeGroups0.21
threejs0.3.3ThreeWay1.1.3
thurstonianIRT0.12.5tibble3.2.1
tibbletime0.1.8tictoc1.2.1
Tides2.1tidyBdE0.3.6
tidycensus1.6.3tidyestimate1.1.1
tidygraph1.3.1tidyhydat0.6.1
tidyLPA1.1.0tidymodels1.2.0
tidyquant1.0.7tidyqwi0.1.2
tidyr1.3.1tidyREDCap1.1.1
tidyRSS2.0.7tidyselect1.2.1
tidysynth0.2.0tidytable0.11.0
tidyterra0.6.0tidytext0.4.2
tidytree0.4.6tidyverse2.0.0
tiff0.1-12tigris2.1
tikzDevice0.12.6timechange0.3.0
timeDate4032.109timeSeries4032.109
timeseriesdb1.0.0-1.1.2timetk2.9.0
timsac1.3.8-4tinyProject0.6.1
tinytable0.2.1tinytex0.50
tis1.39tkrplot0.0-27
TLMoments0.7.5.3tm0.7-13
tm.plugin.alceste1.1.1tm.plugin.dc0.2-10
tm.plugin.europresse1.4tm.plugin.factiva1.8
tm.plugin.lexisnexis1.4.1tm.plugin.mail0.2-2
tmap3.3-4tmaptools3.1-1
TMB1.9.11Tmisc1.0.1
tmod0.50.13tmvnsim1.0-2
tmvtnorm1.6tnet3.0.16
tokenizers0.3.0tokenizers.bpe0.1.3
toOrdinal1.3-0.0topicdoc0.1.1
topicmodels0.2-16topicmodels.etm0.1.0
topmodel0.7.5toprdata1.0.2
torch0.12.0torchaudio0.3.1.9000
torchdatasets0.3.0torchvision0.5.1
tpr0.3-3tracerer2.2.3
trackdem0.6trackdf0.3.3
trackdown1.1.1trackeR1.6.0
trackeRapp1.2TrackReconstruction1.3
tractor.base3.4.2traipse0.3.0
trajectories0.2-8TrajectoryUtils1.8.0
trajr1.5.1transformr0.1.5
transfR1.0.11TransPhylo1.4.5
trapezoid2.0-2traudem1.0.3
tree1.0-43treebase0.1.5
TreeBUGS1.5.0treedater0.5.0
TreeDist2.7.0treefit1.0.2
treeio1.24.0treemap2.4-4
TreeSearch1.5.0TreeSim2.4
treespace1.1.4.3TreeTools1.10.0
trend1.1.6trendeval0.1.0
trending0.1.0TrialSize1.4
triangle1.0triebeard0.4.1
trimcluster0.1-5trip1.10.0
tripack1.3-9.1tripEstimation0.0-46
TripleR1.5.4TruncatedNormal2.2.2
truncdist1.0-2truncnorm1.0-9
truncreg0.2-5trust0.1-8
trustOptim0.8.7.3tryCatchLog1.3.1
TSA1.3.1TSANN0.1.0
tsbox0.4.1tsBSS1.0.0
TSCAN1.38.0TSclust1.3.1
tscount1.4.3tsdb1.1-0
tsdecomp0.2TSdeeplearning0.1.0
tsdisagg20.1.0TSdisaggregation2.0.0
TSdist3.7.1tsDyn11.0.4.1
TSEntropies0.9tseries0.10-55
tseriesChaos0.1-13.1tseriesEntropy0.7-2
tseriesTARMA0.3-4tsfeatures1.1.1
tsfknn0.6.0tsibble1.1.4
tsibbledata0.4.1tsibbletalk0.1.0
tsintermittent1.10tsiR0.4.3
TSLSTM0.1.0tsModel0.6-1
tsne0.1-3.1tsoutliers0.6-10
TSP1.2-4tsPI1.0.4
TSrepr1.1.0tsrobprep0.3.2
tssim0.1.7TSstudio0.1.7
TSTutorial1.2.7tsutils0.9.4
tswge2.1.0tth4.12-0-1
TTR0.24.4tufterhandout1.2.1
tune1.2.1turner0.1.9
TUWmodel1.1-1tvm0.5.2
tweedie2.3.5tweenr2.0.3
twosamples2.0.1TxDb.Hsapiens.UCSC.hg19.knownGene3.2.2
TxDb.Hsapiens.UCSC.hg38.knownGene3.17.0txtq0.2.4
tzdb0.4.0uaparserjs0.3.5
ubiquity2.0.3ucminf1.2.1
UComp4.0.2udpipe0.8.11
ufRisk1.0.7ugatsdb0.2.3
uGMAR3.4.5umap0.2.10.0
uncmbb0.2.2unglue0.1.0
UnifiedDoseFinding0.1.10units0.8-5
univOutl0.4unrepx1.0-2
unrtf1.4.5UpSetR1.4.0
uptasticsearch0.4.0urca1.3-3
urlchecker1.0.1urlshorteneR1.5.7
urltools1.7.3uroot2.1-3
USA.state.boundaries1.0.1usdata0.2.0
usethis2.2.3usmap0.7.1
usmapdata0.2.2utf81.2.4
utility1.4.6uuid1.2-0
uwot0.2.2V84.4.2
VALERIE1.1.0validate1.1.5
validatetools0.5.2valr0.8.1
VAM1.1.0vapour0.9.5
VAR.etp1.1varbvs2.6-10
VARDetect0.1.6vardiag0.2-1
vardpoor0.20.1VaRES1.0.2
vars1.6-1VARshrink0.3.1
varycoef0.3.4VCA1.5.1
vcd1.4-12vcdExtra0.8-5
vcr1.2.2vctrs0.6.5
vdg1.2.3VedicDateTime0.1.9
vegan2.6-4vegperiod0.4.0
VennDiagram1.7.3venneuler1.1-4
VGAM1.1-10VGAMdata1.1-9
vglmer1.0.3vhica0.2.8
VIC50.2.6VIM6.2.2
VineCopula2.5.0vines1.1.5
vip0.4.1viridis0.6.5
viridisLite0.4.2visNetwork2.1.2
visualize4.5.0vkR0.2
volatilityTrader1.0.1volcano3D2.0.9
volleystat0.2.0vpc1.2.2
vroom1.6.5vrtest1.2
W3CMarkupValidator0.1-7waiter0.2.5
waldo0.5.2warp0.2.1
washdata0.1.4WASP1.4.3
waterData1.0.8waterquality1.0.0
Watersheds1.1WaveletComp1.1
wavelets0.3-0.2WaveSampling0.1.3
waveslim1.8.4wavethresh4.7.2
wavScalogram1.1.3wbstats1.0.4
wCorr1.9.8WDI2.7.8
wdman0.2.6WebAnalytics0.9.12
webchem1.3.0webdriver1.0.6
WebGestaltR0.4.6webmockr0.9.0
webreadr0.4.0webshot0.5.5
webshot20.1.1websocket1.4.1
webutils1.2.0wehoop2.0.0
WeightIt1.0.0weights1.0.4
welo0.1.4WeMix4.0.3
WGCNA1.72-5WH1.1.1
whisker0.4.1whitebox2.3.4
whitening1.4.0whoami1.3.0
widgetframe0.3.1WikidataQueryServiceR1.0.0
WikidataR2.3.3wikipediatrend2.1.6
WikipediR1.7.1wikitaxa0.4.0
wildlifeDI1.0.0windex2.0.7
wINEQ1.2.0withr3.0.0
wk0.9.1wktmo1.0.5
wkutils0.1.3wnl0.8.0
wooldridge1.4-3worcs0.1.14
word2vec0.4.0wordcloud2.6
wordnet0.1-16workflowr1.7.1
workflows1.1.4workflowsets1.1.0
worldfootballR0.6.2worldmet0.9.8
worrms0.4.3wpp20171.2-3
wpp20191.1-1wql1.0.0
WrightMap1.3writexl1.5.0
WriteXLS6.5.0wrMisc1.14.2
wrProteo1.11.0.1WRSS3.1
wrswoR1.1.1WRTDStidal1.1.4
WufooR1.0.1x121.10.3
x13binary1.1.60xaringan0.30
XBRL0.99.19.1xfun0.43
xgboost1.7.7.1xgxr1.1.2
XLConnect1.0.9xlsx0.6.5
xlsxjars0.6.1XML3.99-0.16.1
xml21.3.6XML2R0.0.6
xmlrpc21.1xopen1.0.0
xplain0.2.2xpose0.4.18
xpose.nlmixr20.4.0xpose44.7.3
xslt1.4.5xtable1.8-4
xts0.13.2XVector0.40.0
xxIRT2.1.2yaImpute1.0-34
yaml2.3.8yardstick1.3.1
yesno0.1.2yhatr0.15.1
yorkr0.0.42ypssc1.1.0
yuima1.15.27yulab.utils0.1.4
zeallot0.1.0zen4R0.9
zic0.9.1ZIM1.1.0
ZINARp0.1.0zip2.3.1
zipfR0.6-70zlib1.0.3
zlibbioc1.46.0zoo1.8-12
ZRA0.2ztable0.2.3
zTree1.0.7zyp0.11-1

RShiny Server

R: 4.3.3

rshiny-server: 1.5.21.1012

CUDA Version: 11.7

GPU Driver Version: 515.43.04

Release Notes

Upgraded R to version 4.3.3 and all R packages to their latest versions.

This AMI provides thousands of R packages covering various domains such as data science, machine learning, economitrics, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, reproducible research, phylogenetics, web technologies, hydrology, sports analytics, natural language processing, actuarial science, optimization, genomics, proteomics, metabolomics, transcriptomics, and other omics.

R packages (4161)

packageversionpackageversion
abc2.2.1abc.data1.0
ABCoptim0.15.0abcrf1.9
abglasso0.1.1abind1.4-5
abtest1.0.1accrualPlot1.0.7
acebayes1.10acepack1.4.2
acp2.1acs2.1.4
ACSWR1.0ActivePathways2.0.3
actuar3.3-4actuaRE0.1.5
ActuarialM0.1.0actuaryr1.1.1
actxps1.4.0ada2.0-5
adagio0.9.2adaptivetau2.3
adaptMCMC1.5adaptr1.3.2
ADAPTS1.0.22adaptsmoFMRI1.2
adaptTest1.2additivityTests1.1-4.1
ade41.7-22ade4TkGUI0.3-1
adegenet2.1.10adegraphics1.0-21
adehabitatHR0.4.21adehabitatHS0.3.17
adehabitatLT0.3.27adehabitatMA0.3.16
adephylo1.1-16ADGofTest0.3
adimpro0.9.6adiv2.2.1
adjclust0.6.9admisc0.34
AdMit2.1.9ads1.5-10
AdvancedBasketballStats1.0.1AER1.2-12
affy1.78.0affyio1.70.0
africamonitor0.2.4agricolae1.3-7
agricolaeplotr0.5.0agridat1.23
agriwater1.0.2agvgd0.1.2
AhoCorasickTrie0.1.2airGR1.7.6
airGRdatassim0.1.3airGRiwrm0.6.2
airGRteaching0.3.2airports0.1.0
airr1.5.0ajv1.0.0
akima0.6-3.4alabama2023.1.0
alakazam1.3.0aLFQ1.3.6
AlgDesign1.2.1aliases2entrez0.1.2
almanac1.0.0alpaca0.3.4
alphavantager0.1.3ALTopt0.1.2
Amelia1.8.1AmericanCallOpt0.95
ammiBayes1.0-2ampir1.1.0
AMR2.1.1anabel3.0.1
AnaCoDa0.1.4.4anacor1.1-4
analogsea1.0.7.2anesrake0.80
animation2.7anipaths0.10.3
anMC0.2.5annotate1.78.0
AnnotationBustR1.3.0AnnotationDbi1.62.1
AnnuityRIR1.0-0Anthropometry1.19
anytime0.3.9ao0.3.3
aod1.3.3aoos0.5.0
AovBay0.1.0apc2.0.0
apcluster1.4.11ape5.7-1
APFr1.0.2aphid1.3.5
aphylo0.3-3aplot0.2.2
apollo0.3.1approximator1.2-8
apt3.0ARCensReg3.0.1
ArchaeoChron0.1ArchaeoPhases1.8
archetypes2.2-0.1archivist2.3.6
ArDec2.1-1ARDL0.2.4
ardl.nardl1.3.0areal0.1.8
arfima1.8-1argparse2.2.2
arm1.13-1aroma.apd0.7.0
arpr0.1.2arrangements1.1.9
arrow14.0.2.1ars0.6
aRxiv0.10ascii2.6
asd2.2ash1.0-15
ashr2.2-63AsioHeaders1.22.1-2
askpass1.2.0aspect1.0-6
ASSA2.0assertive.base0.0-9
assertive.files0.0-2assertive.numbers0.0-2
assertthat0.2.1AssetCorr1.0.4
astrochron1.2astsa2.1
asymmetry2.0.4ata1.1.1
atom4R0.3-3atRisk0.1.0
aTSA3.1.2.1attempt0.3.1
attention0.4.0AUC0.3.2
audio0.1-11autoFRK1.4.3
autoimage2.2.3automap1.1-9
autostsm3.1.3av0.9.0
aweek1.0.3aws2.5-5
aws.signature0.6.0awsMethods1.1-1
AzureAuth1.3.3AzureCognitive1.0.1
AzureContainers1.3.2AzureCosmosR1.0.0
AzureGraph1.3.4AzureKusto1.1.3
AzureQstor1.0.1AzureRMR2.4.4
AzureStor3.7.0AzureTableStor1.0.0
AzureVision1.0.2AzureVM2.2.2
babelgene22.9babelwhale1.2.0
BACCO2.1-0BACCT1.0
backports1.4.1backtest0.3-4
bacondecomp0.1.1baggr0.7.8
bain0.2.10BalancedSampling2.0.6
BaM1.0.3bama1.3.0
bamdit3.4.0bamlss1.2-2
BAMMtools2.1.11bang1.0.3
BANOVA1.2.1BarcodingR1.0-3
BART2.9.6bartBMA1.0
bartCause1.0-6bartMachine1.3.4.1
bartMachineJARs1.2.1BAS1.7.1
basad0.3.0base642.0.1
base64enc0.1-3base64url1.4
baseballDBR0.1.2basicMCMCplots0.2.7
BASiNET0.0.5BaSkePro1.1.1
BasketballAnalyzeR0.5.0BASS1.3.1
BatchExperiments1.4.3BatchJobs1.9
batchmeans1.0-4BAwiR1.3.2
baycn1.2.0bayefdr0.2.1
bayes4psy1.2.12bayesAB1.1.3
bayesammi0.1.0bayesanova1.5
BayesARIMAX0.1.1BayesBinMix1.4.1
bayesbio1.0.0bayesboot0.2.2
BayesBP1.1bayesbr0.0.1.0
BayesCACE1.2.3BayesCombo1.0
BayesComm0.1-2bayescopulareg0.1.3
bayescount0.9.99-9BayesCR2.1
bayesCT0.99.3BayesCTDesign0.6.1
BayesDA2012.04-1bayesDccGarch3.0.4
bayesdfa1.3.3bayesdistreg0.1.0
bayesDP1.3.6BayesFactor0.9.12-4.7
BayesFM0.1.5bayesforecast1.0.1
bayesGAM0.0.2bayesGARCH2.1.10
BayesGOF5.2BayesGPfit1.1.0
BayesGWQS0.1.1bayesian0.0.9
bayesianETAS1.0.3Bayesiangammareg0.1.0
BayesianGLasso0.2.0BayesianLaterality0.1.2
BayesianNetwork0.3BayesianTools0.1.8
bayesImageS0.6-1BayesLCA1.9
bayesLife5.2-0bayeslincom1.3.0
BayesLN0.2.10BayesLogit2.1
bayesloglin1.0.1bayeslongitudinal0.1.0
bayesm3.1-6BayesMallows2.0.1
BayesMassBal1.1.0bayesmeta3.4
bayesmix0.7-6bayesnec2.1.1.0
bayesplot1.11.1bayesQR2.4
BayesSAE1.0-2bayestestR0.13.2
bayesTFR7.4-2BayesTools0.2.17
BayesTree0.3-1.5BayesVarSel2.2.5
BayesX0.3-3BAYSTAR0.2-10
baytrends2.0.11BB2019.10-1
BBmisc1.13bbmle1.0.25.1
bbotk0.8.0BCBCSF1.0-1
BCC19970.1.1BCE2.2.0
Bchron4.7.6BClustLonG0.1.3
bcp4.0.3bcpa1.3.2
bcrm0.5.4BDgraph2.72
bdrc1.1.0bdsmatrix1.3-7
BE0.2.4beachmat2.16.0
beadarray2.50.0BeadDataPackR1.52.0
beakr0.4.3bearishTrader1.0.2
BED1.5.0beepr1.3
beeswarm0.4.0benchmarkme1.0.8
benchmarkmeData1.0.4BenfordTests1.2.0
bentcableAR0.3.1Bergm5.0.7
berryFunctions1.22.5Bessel0.6-0
BEST0.5.4BetaBit2.2
betafunctions1.8.1betapart1.6
betareg3.1-4betategarch3.3
BETS0.4.9bets.covid191.0.0
beyondWhittle1.2.0bezier1.1.2
bfast1.6.1BFpack1.2.3
BGGM2.1.1BGLR1.1.1
BGVAR2.5.5bgw0.1.2
BH1.84.0-0BHH22016.05.31
BiasCorrector0.2.2BiasedUrn2.0.11
bibtex0.5.1biclust2.0.3.1
bidask2.0.2bife0.7.2
BIFIEsurvey3.5-19biganalytics1.1.21
bigchess1.9.1bigD0.2.0
bigleaf0.8.2biglm0.9-2.1
bigmemory4.6.4bigmemory.sri0.1.8
bigrquery1.5.0bigsplines1.1-1
bigtime0.2.3BigVAR1.1.2
bimets3.0.2bindr0.1.1
bindrcpp0.2.3binman0.1.3
binom1.1-1.1binomSamSize0.1-5
binr1.1.1binseqtest1.0.4
bio3d2.4-4Biobase2.60.0
BiocFileCache2.8.0BiocGenerics0.46.0
BiocIO1.10.0BiocManager1.30.22
BiocParallel1.34.1BiocSingular1.16.0
BiocVersion3.17.1bioinactivation1.2.3
BioInsight0.3.1biomaRt2.56.1
biomartr1.0.7biomformat1.28.0
bioOED0.2.1bioseq0.1.4
Biostrings2.68.0biotic0.1.2
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XML3.99-0.16.1xml21.3.6
XML2R0.0.6xmlrpc21.1
xopen1.0.0xplain0.2.2
xpose0.4.18xpose.nlmixr20.4.0
xpose44.7.3xslt1.4.4
xtable1.8-4xts0.13.2
XVector0.40.0xxIRT2.1.2
yaImpute1.0-34yaml2.3.8
yardstick1.3.0yesno0.1.2
yhatr0.15.1yorkr0.0.41
ypssc1.1.0yuima1.15.27
yulab.utils0.1.4zeallot0.1.0
zen4R0.9zic0.9.1
ZIM1.1.0ZINARp0.1.0
zip2.3.1zipfR0.6-70
zlib1.0.3zlibbioc1.46.0
zoo1.8-12ZRA0.2
ztable0.2.3zTree1.0.7
zyp0.11-1

RShiny Server

R: 4.3.2

rshiny-server: 1.5.21.1012

CUDA Version: 11.7

GPU Driver Version: 515.43.04

Release Notes

Upgraded R to 4.3.2 and shiny-server to version shiny-server-1.5.21.1012, and all R packages to their latest versions.

This AMI provides thousands of R packages covering various domains such as data science, machine learning, economitrics, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, reproducible research, phylogenetics, web technologies, hydrology, sports analytics and natural language processing.

R packages (3638)

packageversionpackageversion
abc2.2.1abc.data1.0
abcrf1.9abglasso0.1.1
abind1.4-5abtest1.0.1
accrualPlot1.0.7acebayes1.10
acepack1.4.2acp2.1
acs2.1.4ACSWR1.0
actuar3.3-4ada2.0-5
adagio0.9.2adaptivetau2.3
adaptMCMC1.4adaptr1.3.2
adaptsmoFMRI1.2adaptTest1.2
additivityTests1.1-4.1ade41.7-22
ade4TkGUI0.3-1adegenet2.1.10
adegraphics1.0-21adehabitatHR0.4.21
adehabitatHS0.3.17adehabitatLT0.3.27
adehabitatMA0.3.16adephylo1.1-16
ADGofTest0.3adimpro0.9.6
adiv2.2admisc0.34
AdMit2.1.9ads1.5-10
AdvancedBasketballStats1.0.1AER1.2-10
affy1.78.0affyio1.70.0
africamonitor0.2.3agricolae1.3-7
agricolaeplotr0.3.1agridat1.22
agriwater1.0.2airGR1.7.6
airGRdatassim0.1.3airGRiwrm0.6.2
airGRteaching0.3.2airports0.1.0
ajv1.0.0akima0.6-3.4
alabama2023.1.0AlgDesign1.2.1
almanac1.0.0alpaca0.3.4
alphavantager0.1.3ALTopt0.1.2
Amelia1.8.1AmericanCallOpt0.95
ammiBayes1.0-1AMR2.1.1
AnaCoDa0.1.4.4anacor1.1-4
analogsea1.0.7.2anesrake0.80
animation2.7anipaths0.10.2
AnnotationDbi1.62.1Anthropometry1.19
anytime0.3.9aod1.3.3
aoos0.5.0AovBay0.1.0
ape5.7-1APFr1.0.2
aphid1.3.5aphylo0.3-3
aplot0.2.2apollo0.3.1
approximator1.2-8apt3.0
ARCensReg3.0.1ArchaeoChron0.1
ArchaeoPhases1.8archetypes2.2-0.1
archivist2.3.6ArDec2.1-1
ARDL0.2.4ardl.nardl1.2.3
areal0.1.8arfima1.8-1
argparse2.2.2arm1.13-1
aroma.apd0.7.0arpr0.1.2
arrangements1.1.9arrow14.0.0.2
ars0.6aRxiv0.6
ascii2.4asd2.2
ash1.0-15ashr2.2-63
AsioHeaders1.22.1-2askpass1.2.0
aspect1.0-6ASSA2.0
assertthat0.2.1AssetCorr1.0.4
astsa2.1asymmetry2.0.4
ata1.1.1atom4R0.3-3
aTSA3.1.2attempt0.3.1
attention0.4.0AUC0.3.2
audio0.1-11autoFRK1.4.3
autoimage2.2.3automap1.1-9
autostsm3.1.2av0.9.0
aweek1.0.3aws2.5-3
aws.signature0.6.0awsMethods1.1-1
AzureAuth1.3.3AzureCognitive1.0.1
AzureContainers1.3.2AzureCosmosR1.0.0
AzureGraph1.3.4AzureKusto1.1.3
AzureQstor1.0.1AzureRMR2.4.4
AzureStor3.7.0AzureTableStor1.0.0
AzureVision1.0.2AzureVM2.2.2
BACCO2.1-0BACCT1.0
backports1.4.1backtest0.3-4
bacondecomp0.1.1baggr0.7.6
bain0.2.10BalancedSampling1.6.3
BaM1.0.3bama1.3.0
bamdit3.4.0bamlss1.2-2
BAMMtools2.1.11bang1.0.3
BANOVA1.2.1BART2.9.6
bartBMA1.0bartCause1.0-6
bartMachine1.3.4.1bartMachineJARs1.2.1
BAS1.7.1basad0.3.0
base642.0.1base64enc0.1-3
base64url1.4baseballDBR0.1.2
basicMCMCplots0.2.7BaSkePro1.1.1
BasketballAnalyzeR0.5.0BASS1.3.1
BatchExperiments1.4.3BatchJobs1.9
batchmeans1.0-4BAwiR1.3.2
baycn1.2.0bayefdr0.2.1
bayes4psy1.2.12bayesAB1.1.3
bayesammi0.1.0bayesanova1.5
BayesARIMAX0.1.1BayesBinMix1.4.1
bayesbio1.0.0bayesboot0.2.2
BayesBP1.1bayesbr0.0.1.0
BayesCACE1.2.3BayesCombo1.0
BayesComm0.1-2bayescopulareg0.1.3
bayescount0.9.99-9BayesCR2.1
bayesCT0.99.3BayesCTDesign0.6.1
BayesDA2012.04-1bayesDccGarch3.0.4
bayesdfa1.3.1bayesdistreg0.1.0
bayesDP1.3.6BayesFactor0.9.12-4.6
BayesFM0.1.5bayesforecast1.0.1
bayesGAM0.0.2bayesGARCH2.1.10
BayesGOF5.2BayesGPfit1.1.0
BayesGWQS0.1.1bayesian0.0.9
bayesianETAS1.0.3Bayesiangammareg0.1.0
BayesianGLasso0.2.0BayesianLaterality0.1.2
BayesianNetwork0.3BayesianTools0.1.8
bayesImageS0.6-1BayesLCA1.9
bayesLife5.2-0bayeslincom1.3.0
BayesLN0.2.10BayesLogit2.1
bayesloglin1.0.1bayeslongitudinal0.1.0
bayesm3.1-6BayesMallows1.5.0
BayesMassBal1.1.0bayesmeta3.3
bayesmix0.7-6bayesnec2.1.1.0
bayesplot1.10.0bayesQR2.4
BayesSAE1.0-2bayestestR0.13.1
bayesTFR7.4-2BayesTools0.2.16
BayesTree0.3-1.4BayesVarSel2.2.5
BayesX0.3-3BAYSTAR0.2-10
baytrends2.0.9BB2019.10-1
BBmisc1.13bbmle1.0.25.1
bbotk0.7.3BCBCSF1.0-1
BCC19970.1.1BCE2.2.0
Bchron4.7.6bcp4.0.3
bcpa1.3.2bcrm0.5.4
BDgraph2.72bdrc1.1.0
bdsmatrix1.3-6BE0.2.4
beadarray2.50.0BeadDataPackR1.52.0
beakr0.4.3bearishTrader1.0.2
beepr1.3beeswarm0.4.0
benchmarkme1.0.8benchmarkmeData1.0.4
BenfordTests1.2.0bentcableAR0.3.1
Bergm5.0.7berryFunctions1.22.0
Bessel0.6-0BEST0.5.4
BetaBit2.2betafunctions1.8.1
betapart1.6betareg3.1-4
betategarch3.3BETS0.4.9
bets.covid191.0.0beyondWhittle1.2.0
bezier1.1.2bfast1.6.1
BFpack1.2.3BGGM2.0.4
BGLR1.1.1BGVAR2.5.5
bgw0.1.2BH1.84.0-0
BHH22016.05.31BiasedUrn2.0.11
bibtex0.5.1biclust2.0.3.1
bidask2.0.2bife0.7.2
BIFIEsurvey3.4-15biganalytics1.1.21
bigchess1.9.1bigD0.2.0
bigleaf0.8.2biglm0.9-2.1
bigmemory4.6.4bigmemory.sri0.1.8
bigrquery1.4.2bigsplines1.1-1
bigtime0.2.3BigVAR1.1.2
bimets3.0.2bindr0.1.1
bindrcpp0.2.3binman0.1.3
binom1.1-1.1binomSamSize0.1-5
binr1.1.1binseqtest1.0.4
Biobase2.60.0BiocGenerics0.46.0
BiocManager1.30.22BiocParallel1.34.1
BiocVersion3.17.1bioinactivation1.2.3
biomformat1.28.0bioOED0.2.1
Biostrings2.68.0biotic0.1.2
bipartite2.19birtr1.0.0
bit4.0.5bit644.0.5
bitops1.0-7biwavelet0.20.21
bizdays1.0.13bkmr0.2.2
blaise1.3.11blastula0.3.4
blavaan0.5-2BLModel1.0.2
blob1.2.4blocklength0.1.5
blockmatrix1.0blockrand1.5
blocksdesign4.9blockTools0.6.4
blogdown1.18BLR1.6
BMA3.18.17bmgarch2.0.0
BMisc1.4.5bmixture1.7
BMS0.3.5BMTAR0.1.1
bnlearn4.9.1BNPTSclust2.0
BNSP2.2.3boa1.1.8-2
boilerpipeR1.3.2BOIN2.7.2
bold1.3.0Bolstad0.2-41
Bolstad21.0-29bondAnalyst1.0.1
bookdown0.37Boom0.9.14
BoomSpikeSlab1.2.6bootnet1.5.6
BootPR1.0bootstrap2019.6
bootUR1.0.2BoSSA3.7
boussinesq1.0.6boxr0.3.6
bpca1.3-6bqtl1.0-35
BradleyTerry21.1-2brainR1.6.0
brandwatchR0.3.0breakfast2.3
brew1.0-10brglm0.7.2
brglm20.9.2bridgesampling1.1-2
brio1.1.4brms2.20.4
Brobdingnag1.2-9broman0.80
broom1.0.5broom.helpers1.14.0
brotli1.3.0bsam1.1.3
bsamGP1.2.4bslib0.6.1
BsMD2023.920bspec1.6
bspmma0.1-2bssm2.0.2
BSSprep0.1bsts0.9.9
bsvars2.1.0BTLLasso0.1-11
BTM0.3.7bullishTrader1.0.1
bundesbank0.1-11BurStFin1.3
BurStMisc1.1BVAR1.0.4
bvartools0.2.4ca0.71.1
cabinets0.6.0cabootcrs2.1.0
cachem1.0.8cacIRT1.4
CADFtest0.3-3caffsim0.2.2
Cairo1.6-2CALANGO1.0.16
calculus1.0.1CalibrateSSB1.3.0
calibrator1.2-8callr3.7.3
cancensus0.5.6candisc0.8-6
CANSIM2R1.14.1caper1.0.3
captr0.3.0car3.1-2
CARBayes6.1CARBayesdata3.0
CARBayesST4.0carData3.0-5
caret6.0-94carfima2.0.2
caribou1.1-1cartogram0.3.0
CAST0.9.0castor1.8.0
caTools1.18.2catR3.17
causact0.5.3CausalImpact1.3.0
CAvariants6.0cbsodataR1.0.1
cccp0.3-1cdlTools0.15
CDM8.2-6CDNmoney2012.4-2
cds1.0.3CellNOptR1.46.0
cellranger1.1.0censReg0.5-36
censusapi0.8.0cfbfastR1.9.0
CFtime1.2.0ChainLadder0.2.18
chandwich1.1.6changepoint2.2.4
changepoint.geo1.0.2changepoint.np1.0.5
checkLuhn1.1.0checkmate2.3.1
checkpoint1.0.2chem.databases1.0.0
cherryblossom0.1.0chess1.0.1
chilemapas0.3.0chk0.9.1
choiceDes0.9-3CholWishart1.1.2
choroplethr3.7.2choroplethrMaps1.0.1
chromote0.1.2chron2.3-61
cifti0.4.5cinterpolate1.0.1
circlize0.4.15CircSpaceTime0.9.0
CircStats0.2-6circular0.5-0
ciTools0.6.1Claddis0.6.3
clarifai0.4.2classInt0.4-10
cli3.6.2clifro3.2-5
climatol4.0.0clime0.5.0
clinDR2.4.1clinfun1.1.5
clinicalsignificance2.0.0clinPK0.11.1
clinsig1.2clipr0.8.0
clisymbols1.2.0clock0.7.0
clubSandwich0.5.10clue0.3-65
clustDRM0.1-0clusterGeneration1.3.8
clusterPower0.7.0clusterSEs2.6.5
clustMixType0.3-14ClustVarLV2.1.1
clv0.3-2.4cmaes1.0-12
CMLS1.0-1cmm1.0
cmocean0.3-1cmprsk2.2-11
cmrutils1.3.1cNORM3.0.4
CNORode1.42.0coalescentMCMC0.4-4
coalitions0.6.24coarseDataTools0.6-6
cobalt4.5.3coconots1.1.3
cocor1.1-4cocorresp0.4-3
cocron1.0-1coda0.19-4
cOde1.1.1coin1.4-3
cointReg0.2.0collapse2.0.9
collapsibleTree0.1.8colorr1.0.0
colorRamps2.3.1colorspace2.1-0
colourpicker1.3.0colourvalues0.3.9
combinat0.0-8combinedevents0.1.1
CombinS1.1-1CommonJavaJars1.0-6
commonmark1.9.0compare0.2-6
CompQuadForm1.4.3comprehenr0.6.10
conditionz0.1.0conf.design2.0.0
config0.3.2confintr1.0.2
conflicted1.2.0conquer1.3.3
conquestr1.1.1contactdata1.0.0
contfrac1.1-12convevol2.0.1
convey1.0.0coop0.6-3
cops1.3-1copula1.1-3
copulaData0.0-1cordillera1.0-0
corHMM2.8coro1.0.3
corona0.3.0coronavirus0.4.1
corpcor1.6.10corpora0.6
corporaexplorer0.8.6corrgram1.14
corrplot0.92cosa2.1.0
CoSMoS2.1.0costat2.4.1
countrycode1.5.0COVID193.0.3
covid19.analytics2.1.3.3covid19br0.1.8
covid19dbcand0.1.1covid19france0.1.0
covid19italy0.3.1covid19sf0.1.2
covid19swiss0.1.0covid19us0.1.9
CovidMutations0.1.3cowplot1.1.2
CPBayes1.1.0cpk1.3-1
cplm0.7-11cpp110.4.7
CRABS1.2.0crawl2.3.0
crayon1.5.2crch1.1-2
credentials2.0.1credule0.1.4
crfsuite0.4.2cricketdata0.2.3
cricketr0.0.26CRM1.2.4
crmPack1.0.3crossdes1.1-2
Crossover0.1-21crosstalk1.2.1
crs0.15-37crseEventStudy1.2.2
crsmeta0.3.0crul1.4.0
crunch1.30.3crunchy0.3.3
cSEM0.5.0CSGo0.6.7
cshapes2.0csodata1.4.2
cstab0.2-2csv0.6.2
ctbi2.0.5ctmcmove1.2.9
ctmm1.2.0ctrdata1.16.0
ctsem3.9.1ctsemOMX1.0.6
CTT2.3.3CTTShiny0.1
ctv0.9-5cubature2.1.0
cubble0.3.0cubelyr1.0.2
Cubist0.4.2.1curl5.2.0
cvar0.5cvAUC1.1.4
CVST0.2-3CVXR1.0-11
d3Network0.5.2.1DAAG1.25.4
dae3.2.19daewr1.2-11
dagitty0.3-4DAKS2.1-3
DALEX2.4.3DAMOCLES2.3
data.table1.14.10data.tree1.1.0
DatabaseConnector6.3.2DataExplorer0.8.2
dataone2.2.2datapack1.4.1
datapasta3.1.0dataRetrieval2.7.14
datarobot2.18.5dataseries0.2.0
dataverse0.3.13datawizard0.9.1
date1.2-42dateback1.0.3
datetimeutils0.6-3dbarts0.9-25
dbhydroR0.2-8DBI1.2.0
DBItest1.8.0dbmss2.9-0
dbparser2.0.1dbplyr2.4.0
dbscan1.1-12dbx0.3.1
DChaos0.1-7dclone2.3-2
DCluster0.2-9DClusterm1.0-1
dcov0.1.1dCovTS1.4
dcurver0.9.2ddalpha1.3.13
DDD5.2.2dde1.0.4
deBInfer0.4.4debugme1.1.0
decompr6.4.0deducorrect1.3.7
deductive1.0.0DeductiveR1.0.0
deeptime1.0.1deldir2.0-2
deltaPlotR1.6dendextend1.17.1
densEstBayes1.0-2.2DEoptim2.2-8
DEoptimR1.1-3depmix0.9.16
depmixS41.5-0DepthProc2.1.5
Deriv4.1.3derivmkts0.2.5
desc1.4.3DescTools0.99.52
designmatch0.5.4desirability2.1
deSolve1.40desplot1.10
devtools2.4.5dexter1.3.3
dextergui0.2.6dexterMST0.9.6
dfcomb3.1-1dfcrm0.2-2.1
dfidx0.0-5DFIT1.1
dfms0.2.1dfmta1.7-3
dfoptim2023.1.0dfped1.1
dfpk3.5.1DHARMa0.4.6
DHS.rates0.9.1diagis0.2.3
diagonals6.4.0diagram1.6.5
DiagrammeR1.0.10dials1.2.0
DiceDesign1.10DiceEval1.6.1
DiceKriging1.6.0DiceView2.1-0
dichromat2.0-0.1DICOMread0.0.0.3
did2.1.2did2s1.0.2
didimputation0.3.0DIFboost0.3
diffobj0.3.5diffpriv0.4.2
diffusion0.2.7DIFlasso1.0-4
difNLR1.4.2-1DIFplus1.1
difR5.1DIFtree3.1.6
digest0.6.34DIMORA0.3.6
dimRed0.2.6dina2.0.0
dipsaus0.2.8diptest0.77-0
Dire2.2.0DIRECT1.1.0
directlabels2023.8.25dirichletprocess0.4.2
dirmult0.1.3-5disaggR1.0.5.1
discretization1.0-1.1dispRity1.8
DistatisR1.1.1distcrete1.0.3
distfree.cr1.5.1distill1.6
distory1.4.4distr2.9.2
distrEx2.9.0distributional0.3.2
distributions30.2.1DistributionUtils0.6-1
distrom1.0.1distrTeach2.9.0
dittodb0.1.7diversitree0.10-0
divest0.10.3divseg0.0.5
dLagM1.1.13dlm1.1-6
dlnm2.4.7dlsem2.4.6
dlstats0.1.7dm1.0.9
dmri.tracking0.1.0doBy4.6.20
doc2vec0.2.0docopt0.7.1
docopulae0.4.0DoE.base1.2-4
DoE.MIParray1.0-1DoE.wrapper0.12
doFuture1.0.1doMC1.3.8
doParallel1.0.17doRNG1.8.6
DoseFinding1.1-1doSNOW1.0.20
DOSPortfolio0.1.0dotCall641.1-1
DoubleML0.5.3Dowd0.12
downlit0.4.3downloader0.4
dparser1.3.1-11dplyr1.1.4
dqrng0.3.2dr4pl2.0.0
drake7.13.8DRDID1.0.6
dreamerr1.4.0DriftBurstHypothesis0.4.0.1
DRR0.0.4dsa1.0.12
DSAIDE0.9.6dse2020.2-1
DSI1.5.0DSL0.1-7
DT0.31DTAT0.3-6
DtD0.2.2dti1.5.4
dtplyr1.3.1DTSg1.1.3
dtt0.1-2dtts0.1.1
dtw1.23-1dtwclust5.5.12
duckdb0.9.2-1duckduckr1.0.0
dygraphs1.1.1.6dyn0.2-9.6
dynamicTreeCut1.63-1dynatop0.2.3
dynatopGIS0.2.5dynaTree1.2-16
dynlm0.3-6e10711.7-14
earlyR0.0.5earth5.3.2
easypower1.0.1easySdcTable1.0.7
eba1.10-0EbayesThresh1.4-12
ebdbNet1.2.8EBImage4.42.0
EBMAforecast1.0.31ecb0.4.2
Ecdat0.4-2ecespa1.1-17
Ecfun0.3-2echor0.1.9
ecm7.0.0ecodist2.1.3
Ecohydmod1.0.0ECOSolveR0.5.5
ecoval1.2.9ecp3.1.5
edfReader1.2.1edgeR3.42.2
edina0.1.1editrules2.9.3
edmdata1.2.0edstan1.0.6
EdSurvey4.0.4eegkit1.0-4
eegkitdata1.1EFAutilities2.1.3
effects4.2-2EGAnet2.0.3
egg0.4.5egor1.23.3
EGRET3.0.9EGRETci2.0.4
eha2.11.2eigenmodel1.11
elastic1.2.0elasticnet1.3
elevatr0.99.0ellipse0.5.0
ellipsis0.3.2elliptic1.4-0
elo3.0.2EloChoice0.29.4
EloRating0.46.11EMbC2.0.4
EMD1.5.9emdi2.2.1
emg1.0.9emmeans1.9.0
emulator1.2-21encode0.3.6
endtoend2.29energy1.7-11
EngrExpt0.1-8enrichwith0.3.1
ensembleBMA5.1.8entropart1.6-13
EntropyEstimation1.2EntropyMCMC1.0.4
EnvStats2.8.1epanet2toolkit1.0.4
epanetReader0.7.3Epi2.47.1
epibasix1.5epicontacts1.1.3
EpiContactTrace0.17.0EpiCurve2.4-2
epiDisplay3.5.0.2EpiEstim2.2-4
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rpf1.0.14Rphylopars0.3.9
rpinterest0.3.1RPMG2.2-7
rpms0.5.1rpostgis1.5.1
RPostgres1.4.6RPostgreSQL0.7-6
RPPairwiseDesign1.0RPresto1.4.6
rprintf0.2.1RprobitB1.1.2
rprojroot2.0.4RPushbullet0.3.4
RPyGeo1.0.0rpymat0.1.7
RQuantLib0.4.17rrcov1.7-4
rredlist0.7.1rrefine2.1.0
RRPP1.4.0RRreg0.7.5
RRTCS0.0.4rrum0.2.1
rsae0.2RSAGA1.4.0
Rsagacmd0.4.2rsample1.2.0
RSclient0.7-10rscopus0.6.6
rsdmx0.6-3RSEIS4.1-6
RSelenium1.7.9rsem0.5.1
Rserve1.8-13Rsfar0.0.1
RSGHB1.2.2RSiteCatalyst1.4.16
rsm2.10.4RSmartlyIO0.1.3
rsoi0.5.6Rsolnp1.16
rspa0.2.8rsparse0.5.1
RSpectra0.16-1RSQLite2.3.4
Rssa1.0.5rstac0.9.2-5
rstan2.32.5rstanarm2.26.1
rstantools2.3.1.1rstatix0.7.2
rstiefel1.0.1rStrava1.3.0
rstudioapi0.15.0rsurface1.1.0
RSurveillance0.2.1rsvg2.6.0
Rsymphony0.1-33rTensor1.4.8
rtf0.4-14.1RTFA0.1.0
rticles0.26RTL1.3.5
rtoot0.3.4rtop0.6-8
RTransferEntropy0.2.21rtrim2.1.1
rts1.1-14Rtsne0.17
Rttf2pt11.3.12rtweet1.2.1
rucrdtw0.1.6rugarch1.5-1
ruimtehol0.3.1rules1.0.2
runexp0.2.1RUnit0.4.32
runjags2.2.2-1.1runner0.4.3
runstats1.1.0Runuran0.38
rust1.4.2Rvcg0.22.2
rversions2.1.2rvest1.0.3
Rvmmin2018-4.17.1Rwave2.6-5
RWDataPlyr0.6.4RWeka0.4-46
RWekajars3.9.3-2rworldmap1.3-8
rworldxtra1.01rwunderground0.1.8
rxode22.1.1rxode2et2.0.11
rxode2ll2.0.11rxode2parse2.0.17
rxode2random2.0.12RYandexTranslate1.0
s21.1.6S4Vectors0.38.1
sae1.3saeRobust0.4.0
saeSim0.11.0SAEval1.0.0
safetensors0.1.2samadb0.2.6
sampleSelection1.2-12samplesize0.2-4
sampling2.10SamplingBigData1.0.0
samplingbook1.2.4SamplingStrata1.5-4
samplingVarEst1.5sandwich3.1-0
sarima0.9.1SAScii1.0.2
sass0.4.8satellite1.0.4
sazedR2.0.2sbgcop0.980
SBN1.0.0scales1.3.0
scalreg1.0.1scam1.2-14
scatterD31.0.1scatterplot3d0.3-44
scholar0.2.4SCI1.0-2
scoringRules1.1.1scoringutils1.2.2
ScottKnott1.3-2scs3.2.4
SDaA0.1-5sdcHierarchies0.21.0
sdcMicro5.7.7sdcSpatial0.5.2
sdcTable0.32.6sde2.0.18
sdmTMB0.4.1sealasso0.1-3
searchConsoleR0.4.0seas0.6-0
season0.3.15seasonal1.9.0
seasonalview0.3seastests0.15.4
secsse3.0.2seer1.1.8
seg0.5-7segmented2.0-1
selectr0.4-2seleniumPipes0.3.7
sem3.1-15semds0.9-6
SemiPar1.0-4.2semPlot1.1.6
SEMsens1.5.5semsfa1.1
semTools0.5-6semtree0.9.19
semver0.2.0sendmailR1.4-0
SensoMineR1.27sentencepiece0.2.3
separationplot1.4seqDesign1.2
seqinr4.2-36seriation1.5.4
servr0.28sessioninfo1.2.2
setartree0.2.1setRNG2022.4-1
sets1.0-25settings0.2.7
sf1.0-15sFFLHD0.1.2
sfheaders0.4.3sfsmisc1.1-16
sftime0.2-0sgd1.1.1
sgeostat1.0-27shades1.4.0
shape1.4.6shapefiles0.7.2
shapes1.2.7SharpeR1.3.0
shiny1.8.0shiny.semantic0.4.3
shinyAce0.4.2shinyalert3.0.0
shinybrms1.8.0shinyBS0.61.1
shinycssloaders1.0.0shinydashboard0.7.2
shinydashboardPlus2.0.3shinyFiles0.9.3
ShinyItemAnalysis1.5.0shinyjqui0.4.1
shinyjs2.1.0shinystan2.6.0
shinytest1.5.3shinythemes1.2.0
shinyTree0.3.1shinyWidgets0.8.1
showimage1.0.0showtext0.9-6
showtextdb3.0sigmoid1.4.0
signal1.8-0signs0.1.2
SigTree1.10.6Sim.DiffProc4.8
simcdm0.1.2SimComp3.3
simex1.8simfinapi0.2.4
simglm0.8.9SimilarityMeasures1.4
SimInf9.6.0simpleboot1.1-7
simPop2.1.3simputation0.2.8
simrel2.1.0SiMRiv1.0.6
simsem0.5-16SimSurvey0.1.6
singleRcapture0.2.1.1siplab1.6
sirt3.13-228sitmo2.0.2
sits1.4.2-1sjlabelled1.2.0
sjmisc2.8.9SkewHyperbolic0.4-2
skmeans0.2-16skpr1.6.1
slackr3.3.1slam0.1-50
SLBDD0.0.4sleekts1.0.2
sleeperapi1.0.4Sleuth22.0-5
Sleuth31.0-3SLHD2.1-1
slider0.3.1slippymath0.3.1
sm2.2-5.7.1smacof2.1-5
smacpod2.6SmallCountRounding1.0.3
smam0.7.2smapr0.2.1
smerc1.8.3smoof1.6.0.3
smooth4.0.0smoother1.1
smoothr1.0.1smoots1.1.4
smovie1.1.6SMPracticals1.4-3
sms2.3.1sn2.1.1
sna2.7-2snakecase0.11.1
snow0.4-4SnowballC0.7.1
snowfall1.84-6.3SOAs1.4
soc.ca0.8.0socceR0.1.1
socialmixr0.3.1sodium1.3.1
sofa0.4.0SoilHyP0.1.7
soilhypfit0.1-7soilwater1.0.5
solaR0.46solartime0.0.2
solrium1.2.0sorvi0.8.21
sourcetools0.1.7-1sp2.1-2
sp23design0.9-1spacetime1.3-1
spam2.10-0spaMM4.4.16
spant2.17.0sparklyr1.8.4
sparktex0.1sparr2.3-10
sparseDFM1.0SparseFactorAnalysis1.0
sparseinv0.1.3SparseM1.81
sparseMVN0.2.2sparsevar0.1.0
spatgraphs3.4spatialCovariance0.6-9
SpatialEpi1.2.8SpatialExtremes2.1-0
SpatialPosition2.1.2spatialprobit1.0.1
spatialreg1.3-1spatialsample0.5.1
SpatialTools1.0.5spatialwidget0.2.3
spatstat3.0-7spatstat.data3.0-3
spatstat.explore3.2-5spatstat.geom3.2-7
spatstat.linnet3.1-3spatstat.model3.2-8
spatstat.random3.2-2spatstat.sparse3.0-3
spatstat.utils3.0-4spBayes0.4-7
spBayesSurv1.1.7Spbsampling1.3.5
spd2.0-1spData2.3.0
spdep1.3-1spec0.1.7
spectral2.0speff2trial1.0.5
SPEI1.8.1sperrorest3.0.5
sphet2.0spiderbar0.2.5
spikeslab1.1.6spikeSlabGAM1.1-19
spINAR0.1.0spind2.2.1
splancs2.01-44splines20.5.1
splm1.6-5splus2R1.3-4
spmodel0.5.1spmoran0.2.2.9
SportsTour0.1.0sportyR2.2.1
SpotSampling0.1.0spselect0.0.1
spsur1.0.2.5spsurvey5.5.1
spTimer3.3.2sptotal1.0.1
sqldf0.4-11SqlRender1.16.1
SQRL1.0.2SQUAREM2021.1
srvyr1.2.0ssanv1.1
SSBtools1.5.0ssfa1.2.2
ssgraph1.15ssize.fdr1.3
ssizeRNA1.3.2ssMousetrack1.1.6
ssmrob1.0SSN1.1.17
stable1.1.6stabledist0.7-1
stabs0.6-4staggered1.1
stampr0.3.1StanHeaders2.32.5
stargazer5.2.3starma1.3
stars0.6-4starter0.1.14
STARTS1.3-8startupmsg0.9.6
statcanR0.2.6statcodelists0.9.2
statebins1.4.0statespacer0.5.0
stationaRy0.5.1statip0.2.3
StatMatch1.4.1statmod1.5.0
statnet.common4.9.0StatRank0.0.6
steadyICA1.0SteinIV0.1-1
STFTS0.1.0stinepack1.4
stlplus0.5.1stm1.3.7
STMedianPolish0.2stochvol3.2.3
stockAnalyst1.0.1stopwords2.3
storr1.2.5stR0.6
strand0.2.0strap1.6-0
stratification2.2-7streamDepletr0.2.0
streamR0.4.5stringdist0.9.12
stringfish0.16.0stringi1.8.3
stringmagic1.0.0stringr1.5.1
strucchange1.5-3strucchangeRcpp1.5-3-1.0.4
StructuralDecompose0.1.1styler1.10.2
subplex1.8subscore3.3
sufficientForecasting0.1.0sugrrants0.2.8
summclust0.7.2suntools1.0.0
SuperLearner2.0-28.1superml0.5.6
SuppDists1.1-9.7support.CEs0.7-0
surface0.5suRtex0.9
survcomp1.50.0surveillance1.22.1
survey4.2-1surveybootstrap0.0.3
surveydata0.2.7surveyoutliers0.1
surveyplanning4.0surveysd1.3.1
survivalROC1.0.3.1survPresmooth1.1-11
svars1.3.11svd0.5.5
SVDNF0.1.8svglite2.1.3
svrep0.6.3svs3.0.0
svUnit1.0.6swagger3.33.1
swephR0.3.1SwimmeR0.14.2
swirl2.4.5swirlify0.5.3
switchr0.14.8sylly0.1-6
sym.arma1.0symengine0.2.4
symmoments1.2.1SYNCSA1.3.4
Synth1.1-8synthACS1.7.1
synthesis1.2.4synthpop1.8-0
sys3.4.2sysfonts0.8.8
systemfit1.1-30systemfonts1.0.5
table11.4.3tables0.9.17
tabnet0.5.0TAF4.2.0
TAM4.1-4TAQMNGR2018.5-1
targets1.4.1tau0.0-25
taxize0.9.100TBRDist1.0.2
tbrf0.1.5tcltk21.2-11
Tcomp1.0.1tdigest0.4.1
TeachingDemos2.12teamcolors0.0.4
telegram.bot3.0.0telemac0.1.1
tempdisagg1.1.1tensor1.5
tensorA0.36.2.1tensorflow2.14.0
TensorPreAve1.1.0tensorTS1.0.1
TEQR6.0-0tergm4.2.0
Ternary2.3.0terra1.7-65
TESS2.1.2tesseract5.2.1
testcorr0.2.0TestDataImputation2.3
TestDesign1.5.1tester0.1.7
testit0.13TestScorer1.7.2
testthat3.2.1TexExamRandomizer1.2.3
texreg1.39.3text2vec0.6.4
textcat1.0-8textir2.0-5
textplot0.2.2textrank0.3.1
textreuse0.1.5textshaping0.3.7
textTinyR1.1.8tfarima0.3.2
tfautograph0.3.2tfdatasets2.9.0
tfio0.4.1tfplot2021.6-1
tframe2015.12-1.1tfruns1.5.1
tgp2.4-22TH.data1.1-2
theft0.5.4.1thief0.3
ThreeArmedTrials1.0-4threeBrain1.0.1
ThreeGroups0.21threejs0.3.3
ThreeWay1.1.3thurstonianIRT0.12.4
tibble3.2.1tibbletime0.1.8
tictoc1.2Tides2.1
tidyBdE0.3.4tidycensus1.5
tidygraph1.3.0tidyhydat0.6.1
tidyLPA1.1.0tidymodels1.1.1
tidyquant1.0.7tidyqwi0.1.2
tidyr1.3.0tidyREDCap1.1.1
tidyRSS2.0.7tidyselect1.2.0
tidysynth0.2.0tidytable0.10.2
tidytext0.4.1tidytree0.4.6
tidyverse2.0.0tiff0.1-12
tigris2.0.4tikzDevice0.12.6
timechange0.2.0timeDate4032.109
timeSeries4032.108timeseriesdb1.0.0-1.1.2
timetk2.9.0timsac1.3.8-4
tinyProject0.6.1tinytex0.49
tis1.39tkrplot0.0-27
TLMoments0.7.5.3tm0.7-11
tm.plugin.alceste1.1tm.plugin.dc0.2-10
tm.plugin.europresse1.4tm.plugin.factiva1.8
tm.plugin.lexisnexis1.4.1tm.plugin.mail0.2-2
tmap3.3-4tmaptools3.1-1
TMB1.9.10tmvnsim1.0-2
tmvtnorm1.6tokenizers0.3.0
tokenizers.bpe0.1.3toOrdinal1.3-0.0
topicdoc0.1.1topicmodels0.2-16
topicmodels.etm0.1.0topmodel0.7.5
torch0.12.0torchaudio0.3.1.9000
torchdatasets0.3.0torchvision0.5.1
tpr0.3-3tracerer2.2.3
trackdem0.6trackdf0.3.2
trackdown1.1.1trackeR1.5.2
trackeRapp1.2TrackReconstruction1.3
tractor.base3.3.5.1traipse0.3.0
trajectories0.2-8trajr1.5.1
transfR1.0.11TransPhylo1.4.5
trapezoid2.0-2traudem1.0.1
tree1.0-43treebase0.1.4
TreeBUGS1.5.0treedater0.5.0
TreeDist2.7.0treeio1.24.0
treemap2.4-4TreeSearch1.4.0
TreeSim2.4treespace1.1.4.3
TreeTools1.10.0trend1.1.6
trendeval0.1.0trending0.1.0
TrialSize1.4triangle1.0
triebeard0.4.1trimcluster0.1-5
trip1.10.0tripack1.3-9.1
tripEstimation0.0-46TripleR1.5.4
TruncatedNormal2.2.2truncdist1.0-2
truncnorm1.0-9truncreg0.2-5
trust0.1-8TSA1.3.1
TSANN0.1.0tsbox0.4.1
tsBSS1.0.0TSclust1.3.1
tscount1.4.3tsdb1.1-0
tsdecomp0.2TSdeeplearning0.1.0
tsdisagg20.1.0TSdisaggregation2.0.0
TSdist3.7.1tsDyn11.0.4
TSEntropies0.9tseries0.10-55
tseriesChaos0.1-13.1tseriesEntropy0.7-2
tseriesTARMA0.3-4tsfeatures1.1.1
tsfknn0.6.0tsibble1.1.3
tsibbledata0.4.1tsibbletalk0.1.0
tsintermittent1.10tsiR0.4.3
TSLSTM0.1.0tsModel0.6-1
tsoutliers0.6-8TSP1.2-4
tsPI1.0.4TSrepr1.1.0
tsrobprep0.3.2tssim0.1.7
TSstudio0.1.7TSTutorial1.2.7
tsutils0.9.4tswge2.1.0
tth4.12-0-1TTR0.24.4
tufterhandout1.2.1tune1.1.2
turner0.1.7TUWmodel1.1-1
tvm0.5.2tweedie2.3.5
tweenr2.0.2twosamples2.0.1
txtq0.2.4tzdb0.4.0
uaparserjs0.3.5ubiquity2.0.1
ucminf1.2.1UComp4.0.2
udpipe0.8.11ufRisk1.0.7
ugatsdb0.2.3uGMAR3.4.5
uncmbb0.2.2unglue0.1.0
UnifiedDoseFinding0.1.10units0.8-5
univOutl0.4unrepx1.0-2
unrtf1.4.3uptasticsearch0.4.0
urca1.3-3urlchecker1.0.1
urlshorteneR1.5.7urltools1.7.3
uroot2.1-3USA.state.boundaries1.0.1
usdata0.2.0usethis2.2.2
usmap0.6.4usmapdata0.1.2
utf81.2.4utility1.4.6
uuid1.1-1uwot0.1.16
V84.4.1validate1.1.3
validatetools0.5.2vapour0.9.5
VAR.etp1.1VARDetect0.1.6
vardiag0.2-1vardpoor0.20.1
VaRES1.0.2vars1.6-0
VARshrink0.3.1varycoef0.3.4
VCA1.4.5vcd1.4-12
vcdExtra0.8-5vcr1.2.2
vctrs0.6.5vdg1.2.2
VedicDateTime0.1.9vegan2.6-4
vegperiod0.4.0VennDiagram1.7.3
venneuler1.1-3VGAM1.1-9
VGAMdata1.1-9vglmer1.0.3
VIC50.2.6VIM6.2.2
VineCopula2.5.0vip0.4.1
viridis0.6.4viridisLite0.4.2
visNetwork2.1.2visualize4.5.0
vkR0.2volatilityTrader1.0.1
volleystat0.2.0vpc1.2.2
vroom1.6.5vrtest1.2
W3CMarkupValidator0.1-7waiter0.2.5
waldo0.5.2warp0.2.1
washdata0.1.3WASP1.4.3
waterData1.0.8waterquality1.0.0
Watersheds1.1WaveletComp1.1
wavelets0.3-0.2WaveSampling0.1.3
waveslim1.8.4wavethresh4.7.2
wavScalogram1.1.2wbstats1.0.4
wCorr1.9.8WDI2.7.8
wdman0.2.6WebAnalytics0.9.12
webdriver1.0.6webmockr0.9.0
webreadr0.4.0webshot0.5.5
webshot20.1.1websocket1.4.1
webutils1.2.0wehoop2.0.0
WeightIt0.14.2weights1.0.4
welo0.1.3WeMix4.0.3
whisker0.4.1whitebox2.3.4
whoami1.3.0widgetframe0.3.1
WikidataQueryServiceR1.0.0WikidataR2.3.3
wikipediatrend2.1.6WikipediR1.5.0
wikitaxa0.4.0wildlifeDI0.5.1
windex2.0.7wINEQ1.2.0
withr2.5.2wk0.9.1
wktmo1.0.5wkutils0.1.3
wnl0.7.3wooldridge1.4-3
worcs0.1.14word2vec0.4.0
wordcloud2.6wordnet0.1-16
workflowr1.7.1workflows1.1.3
workflowsets1.0.1worldfootballR0.6.2
worldmet0.9.8worrms0.4.3
wpp20171.2-3wpp20191.1-1
wql1.0.0WrightMap1.3
writexl1.4.2WriteXLS6.5.0
WRSS3.1wrswoR1.1.1
WRTDStidal1.1.4WufooR1.0.1
x121.10.3x13binary1.1.57-4
xaringan0.28XBRL0.99.19.1
xfun0.41xgboost1.7.6.1
xgxr1.1.2XLConnect1.0.7
xlsx0.6.5xlsxjars0.6.1
XML3.99-0.16xml21.3.6
XML2R0.0.6xopen1.0.0
xplain0.2.2xpose0.4.17
xpose.nlmixr20.4.0xpose44.7.2
xslt1.4.4xtable1.8-4
xts0.13.1XVector0.40.0
xxIRT2.1.2yaImpute1.0-34
yaml2.3.8yardstick1.2.0
yesno0.1.2yhatr0.15.1
yorkr0.0.41yuima1.15.22
yulab.utils0.1.3zeallot0.1.0
zen4R0.9zic0.9.1
ZIM1.1.0ZINARp0.1.0
zip2.3.0zipfR0.6-70
zlibbioc1.46.0zoo1.8-12
ZRA0.2ztable0.2.3
zTree1.0.7zyp0.11-1

RShiny Server

R: 4.3.0

rshiny-server: 1.5.20.1002

CUDA Version: 11.7

GPU Driver Version: 515.43.04

This AMI provides thousands of R packages covering various domains such as data science, machine learning, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, and natural language processing.

R packages (2291)

packageversionpackageversion
abc2.2.1abc.data1.0
abcrf1.9abglasso0.1.1
abind1.4-5abtest1.0.1
accrualPlot1.0.7acebayes1.10
acepack1.4.1acp2.1
ACSWR1.0actuar3.3-2
ada2.0-5adaptivetau2.2-3
adaptMCMC1.4adaptr1.3.1
adaptsmoFMRI1.2adaptTest1.1
ade41.7-22ade4TkGUI0.3-1
adegenet2.1.10adegraphics1.0-18
adehabitatLT0.3.27adehabitatMA0.3.16
ADGofTest0.3adimpro0.9.5
admisc0.31AdMit2.1.9
AER1.2-10affy1.78.0
affyio1.70.0africamonitor0.2.3
agricolae1.3-5agricolaeplotr0.2.2
agridat1.21airports0.1.0
akima0.6-3.4alabama2022.4-1
AlgDesign1.2.1almanac1.0.0
alphavantager0.1.3ALTopt0.1.2
Amelia1.8.1ammiBayes1.0-1
AMR2.0.0AnaCoDa0.1.4.4
anacor1.1-4animation2.7
AnnotationDbi1.62.1anytime0.3.9
aod1.3.2AovBay0.1.0
ape5.7-1APFr1.0.2
aplot0.1.10approximator1.2-7
ARCensReg2.1ArchaeoChron0.1
ArchaeoPhases1.8ArDec2.1-1
ARDL0.2.3ardl.nardl1.2.3
arfima1.8-1arm1.13-1
aroma.apd0.6.1arrangements1.1.9
ars0.6ascii2.4
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ssMousetrack1.1.6stabledist0.7-1
stabs0.6-4StanHeaders2.21.0-7
stars0.6-1STARTS1.3-8
startupmsg0.9.6statespacer0.5.0
statmod1.5.0statnet.common4.8.0
StatRank0.0.6steadyICA1.0
STFTS0.1.0stinepack1.4
stlplus0.5.1stm1.3.6
stochvol3.2.1stopwords2.3
stR0.5stringdist0.9.10
stringfish0.15.7stringi1.7.12
stringr1.5.0strucchange1.5-3
strucchangeRcpp1.5-3-1.0.4StructuralDecompose0.1.1
styler1.9.1subplex1.8
subscore3.3sufficientForecasting0.1.0
sugrrants0.2.8SuperLearner2.0-28
superml0.5.6SuppDists1.1-9.7
support.CEs0.5-0survcomp1.50.0
surveillance1.21.1survey4.2-1
survivalROC1.0.3.1survPresmooth1.1-11
svars1.3.11svd0.5.4
svglite2.1.1svs3.0.0
svUnit1.0.6swephR0.3.1
swirl2.4.5swirlify0.5.3
sylly0.1-6sym.arma1.0
symengine0.2.2symmoments1.2.1
synthesis1.2.3sys3.4.1
systemfit1.1-30systemfonts1.0.4
tables0.9.17tabnet0.3.0
TAM4.1-4targets1.1.3
tau0.0-24taxize0.9.100
tbrf0.1.5tcltk21.2-11
Tcomp1.0.1tdigest0.4.1
TeachingDemos2.12tempdisagg1.1
tensor1.5tensorA0.36.2
tensorflow2.11.0TensorPreAve1.1.0
tensorTS1.0.1TEQR6.0-0
tergm4.1.1terra1.7-29
tesseract5.1.0testcorr0.2.0
TestDataImputation2.3TestDesign1.5.1
testit0.13TestScorer1.7.2
testthat3.1.8TexExamRandomizer1.2.3
texreg1.38.6text2vec0.6.3
textcat1.0-8textir2.0-5
textplot0.2.2textrank0.3.1
textreuse0.1.5textshaping0.3.6
textTinyR1.1.7tfarima0.3.2
tfautograph0.3.2tfplot2021.6-1
tframe2015.12-1.1tfruns1.5.1
tgp2.4-21TH.data1.1-2
theft0.4.2.4thief0.3
ThreeArmedTrials1.0-4threeBrain0.2.9
ThreeGroups0.21threejs0.3.3
ThreeWay1.1.3thurstonianIRT0.12.1
tibble3.2.1tictoc1.2
Tides2.1tidygraph1.2.3
tidyLPA1.1.0tidymodels1.1.0
tidyquant1.0.7tidyr1.3.0
tidyselect1.2.0tidytext0.4.1
tidytree0.4.2tidyverse2.0.0
tiff0.1-11timechange0.2.0
timeDate4022.108timeSeries4030.106
timeseriesdb1.0.0-1.1.2timetk2.8.3
timsac1.3.8tinytex0.45
tis1.39tkrplot0.0-27
tm0.7-11tm.plugin.alceste1.1
tm.plugin.dc0.2-10tm.plugin.europresse1.4
tm.plugin.factiva1.8tm.plugin.lexisnexis1.4.1
tm.plugin.mail0.2-2TMB1.9.4
tmvnsim1.0-2tmvtnorm1.5
tokenizers0.3.0tokenizers.bpe0.1.1
toOrdinal1.3-0.0topicdoc0.1.1
topicmodels0.2-14topicmodels.etm0.1.0
torch0.10.0torchaudio0.3.1.9000
torchdatasets0.3.0torchvision0.5.1
tpr0.3-3tractor.base3.3.5.1
TransPhylo1.4.5trapezoid2.0-2
tree1.0-43TreeBUGS1.5.0
treeio1.24.0trend1.1.5
trendeval0.1.0trending0.1.0
TrialSize1.4triangle1.0
triebeard0.4.1trimcluster0.1-5
tripack1.3-9.1TripleR1.5.4
TruncatedNormal2.2.2truncdist1.0-2
truncnorm1.0-9truncreg0.2-5
trust0.1-8TSA1.3.1
TSANN0.1.0tsbox0.4.1
tsBSS1.0.0TSclust1.3.1
tscount1.4.3tsdb1.1-0
tsdecomp0.2TSdeeplearning0.1.0
tsdisagg20.1.0TSdisaggregation2.0.0
TSdist3.7.1tsDyn11.0.4
TSEntropies0.9tseries0.10-54
tseriesChaos0.1-13.1tseriesEntropy0.6-0
tseriesTARMA0.3-2tsfeatures1.1
tsfknn0.5.1tsibble1.1.3
tsibbledata0.4.1tsibbletalk0.1.0
tsintermittent1.10tsiR0.4.3
TSLSTM0.1.0tsModel0.6-1
tsoutliers0.6-8TSP1.2-4
tsPI1.0.3TSrepr1.1.0
tsrobprep0.3.2tssim0.1.7
TSstudio0.1.6TSTutorial1.2.6
tsutils0.9.3tswge2.1.0
TTR0.24.3tune1.1.1
tweenr2.0.2tzdb0.4.0
ubiquity2.0.0ucminf1.1-4.1
UComp4.0.2udpipe0.8.11
ugatsdb0.2.3uGMAR3.4.4
UnifiedDoseFinding0.1.10units0.8-2
unrepx1.0-2urca1.3-3
urlchecker1.0.1urltools1.7.3
uroot2.1-2usdata0.2.0
usethis2.1.6utf81.2.3
uuid1.1-0uwot0.1.14
V84.3.0VAR.etp1.0
VARDetect0.1.6vars1.5-9
VARshrink0.3.1VCA1.4.5
vcd1.4-11vcdExtra0.8-4
vctrs0.6.2vdg1.2.2
VedicDateTime0.1.4vegan2.6-4
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VGAM1.1-8VGAMdata1.1-8
vglmer1.0.3viridis0.6.3
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visualize4.4.0vpc1.2.2
vroom1.6.3waiter0.2.5
waldo0.5.1warp0.2.0
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wavScalogram1.1.2wCorr1.9.6
webdriver1.0.6webshot0.5.4
weights1.0.4whisker0.4.1
WikidataQueryServiceR1.0.0WikidataR2.3.3
WikipediR1.5.0wikitaxa0.4.0
withr2.5.0wk0.7.3
wktmo1.0.5wnl0.7.3
wooldridge1.4-3word2vec0.3.4
wordcloud2.6wordnet0.1-16
workflows1.1.3workflowsets1.0.1
worrms0.4.2wpp20171.2-3
wpp20191.1-1WrightMap1.3
writexl1.4.2x121.10.3
x13binary1.1.57-3xfun0.39
xgboost1.7.5.1xgxr1.1.2
XLConnect1.0.7xlsx0.6.5
xlsxjars0.6.1XML3.99-0.14
xml21.3.4xopen1.0.0
xplain0.2.2xpose0.4.16
xpose.nlmixr20.4.0xpose44.7.2
xtable1.8-4xts0.13.1
XVector0.40.0xxIRT2.1.2
yaImpute1.0-33yaml2.3.7
yardstick1.2.0yesno0.1.2
yuima1.15.22yulab.utils0.0.6
zeallot0.1.0zic0.9.1
ZIM1.1.0ZINARp0.1.0
zip2.3.0zipfR0.6-70
zlibbioc1.46.0zoo1.8-12
ZRA0.2

RShiny Server

R: 4.2.3

rshiny-server: 1.5.20.1002

CUDA Version: 12.0

GPU Driver Version: 525.85.12

R packages

packageversionpackageversion
abc2.2.1abc.data1.0
abind1.4-5ACD1.5.3
acepack1.4.1actuar3.3-2
ada2.0-5ade41.7-22
ade4TkGUI0.3-1adegraphics1.0-18
adehabitatLT0.3.26adehabitatMA0.3.15
admisc0.31affxparser1.70.0
affy1.76.0affyio1.68.0
agricolae1.3-5akima0.6-3.4
AlgDesign1.2.1alphavantager0.1.2
Amelia1.8.1AnnotationDbi1.60.2
anytime0.3.9ape5.7-1
aplot0.1.10arm1.13-1
aroma.apd0.6.1ascii2.4
ash1.0-15askpass1.1
assertthat0.2.1AUC0.3.2
av0.8.3backports1.4.1
base642.0.1base64enc0.1-3
baseballr1.3.0bayesplot1.10.0
BB2019.10-1BDgraph2.72
bdsmatrix1.3-6beadarray2.48.0
BeadDataPackR1.50.0BGLR1.1.0
BH1.81.0-1biganalytics1.1.21
bigD0.2.0biglars1.0.2
biglm0.9-2.1bigmemory4.6.1
bigmemory.sri0.1.6bigml0.1.2
bindr0.1.1bindrcpp0.2.2
Biobase2.58.0BiocGenerics0.44.0
BiocManager1.30.20BiocParallel1.32.5
BiocVersion3.16.0biomformat1.26.0
Biostrings2.66.0bit4.0.5
bit644.0.5bitops1.0-7
blob1.2.4BLR1.6
bold1.2.0bootstrap2019.6
bpca1.3-4BradleyTerry21.1-2
brew1.0-8brglm0.7.2
brglm20.9bridgesampling1.1-2
brio1.1.3brms2.19.0
Brobdingnag1.2-9broom1.0.4
bslib0.4.2BsMD2020.4.30
ca0.71.1cachem1.0.7
calibrator1.2-8callr3.7.3
car3.1-1carData3.0-5
caret6.0-93caTools1.18.2
CellNOptR1.44.0cellranger1.1.0
checkmate2.1.0chron2.3-60
CircStats0.2-6classInt0.4-9
cli3.6.0clipr0.8.0
clock0.6.1clusterGeneration1.3.7
CNORode1.40.0coda0.19-4
coin1.4-2collapse1.9.3
colorspace2.1-0colourpicker1.2.0
combinat0.0-8commonmark1.9.0
conditionz0.1.0conf.design2.0.0
conflicted1.2.0contfrac1.1-12
coro1.0.3corpcor1.6.10
corrgram1.14corrplot0.92
cpp110.4.3crayon1.5.2
credentials1.3.2crosstalk1.2.0
crul1.3ctv0.9-4
cubature2.0.4.6curl5.0.0
CVST0.2-3d3Network0.5.2.1
DAAG1.25.4data.table1.14.8
DataExplorer0.8.2datapasta3.1.0
DBI1.1.3dbplyr2.3.1
deldir1.0-6dendextend1.16.0
DEoptimR1.0-11Deriv4.1.3
desc1.4.2deSolve1.35
devtools2.4.5dfidx0.0-5
dfoptim2020.10-1diagram1.6.5
DiagrammeR1.0.9dials1.1.0
DiceDesign1.9dichromat2.0-0.1
diffobj0.3.5digest0.6.31
dimRed0.2.6diptest0.76-0
discretization1.0-1.1distributional0.3.1
doBy4.6.16doc2vec0.2.0
DoE.base1.2-1doMC1.3.8
doParallel1.0.17dotCall641.0-2
downlit0.4.2downloader0.4
dplyr1.1.0dqrng0.3.0
DRR0.0.4DT0.27
dtplyr1.3.0dummies1.5.6
dygraphs1.1.1.6dynamicTreeCut1.63-1
e10711.7-13EbayesThresh1.4-12
EBImage4.40.0effects4.2-2
ellipse0.4.3ellipsis0.3.2
elliptic1.4-0emulator1.2-21
enrichwith0.3.1equivalence0.7.2
estimability1.4.1ETLUtils1.5
evaluate0.20expint0.1-8
expm0.999-7extraDistr1.9.1
extrafont0.19extrafontdb1.0
fansi1.0.4farver2.1.1
fastICA1.2-3fastmap1.1.1
fastmatch1.1-3fda6.0.5
fdaPDE1.1-11fdrtool1.2.17
fds1.8fdth1.2-6
ff4.0.9ffbase0.13.3
fftwtools0.9-11fields14.1
filehash2.4-5filelock1.0.2
flashClust1.01-2flexmix2.3-19
FNN1.1.3.1fontawesome0.5.0
forcats1.0.0foreach1.5.2
forecast8.21formatR1.14
Formula1.2-5fpc2.2-10
fracdiff1.5-2fs1.6.1
fts0.9.9.2functional0.6
furrr0.3.1futile.logger1.4.3
futile.options1.0.1future1.32.0
future.apply1.10.0gam1.22-1
gamlss5.4-12gamlss.data6.0-2
gamlss.dist6.0-5gargle1.3.0
gclus1.3.2gdata2.18.0.1
geepack1.3.9genalg0.2.1
generics0.1.3genetics1.3.8.1.3
GenomeInfoDb1.34.9GenomeInfoDbData1.2.9
GenomicRanges1.50.2GEOquery2.66.0
geosphere1.5-18gert1.9.2
ggalt0.4.0ggdendro0.1.23
ggforce0.4.1ggformula0.10.2
ggfun0.0.9ggmap3.0.2
ggplot23.4.1ggplotify0.1.0
ggrepel0.9.3ggridges0.5.4
ggstance0.3.6ggtree3.6.2
ggvis0.4.8gh1.4.0
git2r0.31.0gitcreds0.1.2
glassoFast1.0gld2.6.6
glmnet4.1-6globals0.16.2
glue1.6.2gmm1.7
gmodels2.18.1.1gmp0.7-1
GO.db3.16.0goftest1.2-3
googledrive2.0.0googlesheets41.0.1
googleVis0.7.1gower1.0.1
GPArotation2022.10-2gpclib1.5-6
GPfit1.0-8gplots3.1.3
gradethis0.2.11.9000graph1.76.0
gridBase0.4-7gridExtra2.3
gridGraphics0.5-1gridSVG1.7-5
grImport0.9-7grImport20.2-0
gsubfn0.7gt0.8.0
gtable0.3.2gtools3.9.4
HaploSim1.8.4.2hardhat1.2.0
haven2.5.2hdrcde3.4
hexbin1.28.2hflights0.1
HH3.1-49highlight0.5.1
highr0.10Hmisc5.0-1
hms1.1.2htmlTable2.4.1
htmltools0.5.4htmlwidgets1.6.2
httpcode0.3.0httpuv1.6.9
httr1.4.5httr20.2.2
HydroMe2.0-1HyperbolicDist0.6-4
hypergeo1.2-13ICC2.4.0
Icens1.70.0ids1.0.1
igraph1.4.1igraphdata1.0.1
illuminaio0.40.0impute1.72.3
ineq0.2-13infer1.0.4
influenceR0.1.0.1ini0.3.1
inline0.3.19insight0.19.0
interp1.1-3intervals0.15.2
introgress1.2.3inum1.0-5
ipred0.9-14IRanges2.32.0
irlba2.3.5.1Iso0.0-18.1
isoband0.2.7iterators1.0.14
itertools0.1-3janitor2.2.0
jpeg0.1-10jquerylib0.1.4
jsonlite1.8.4juicyjuice0.1.0
KEGGREST1.38.0kernelFactory0.3.0
kernlab0.9-32klaR1.7-1
knitr1.42ks1.14.0
labeling0.4.2labelled2.10.0
LaF0.8.4Lahman10.0-1
lambda.r1.2.4lars1.3
later1.3.0latticeExtra0.6-30
lava1.7.2.1lavaan0.6-15
lavaan.survey1.1.3.1lazyeval0.2.2
lcda0.3.1leaflet2.1.2
leaflet.providers1.9.0leaps3.1
LearnBayes2.15.1learnr0.11.3.9000
lgr0.4.4lhs1.1.6
libcoin1.0-9lifecycle1.0.3
LIM1.4.7limma3.54.2
limSolve1.5.6lisrelToR0.1.5
listenv0.9.0lme41.1-32
lmom2.9lmtest0.9-40
locfit1.5-9.7lokern1.1-10
loo2.5.1lpSolve5.6.18
lubridate1.9.2luz0.3.1
magic1.6-1magrittr2.0.3
manipulateWidget0.11.1mapproj1.2.11
maps3.4.1maptools1.1-6
markdown1.5MassSpecWavelet1.64.1
Matching4.10-8MatchIt4.5.1
mathjaxr1.6-0matrixcalc1.0-6
MatrixModels0.5-1matrixStats0.63.0
maxLik1.5-2mboost2.9-7
mclust6.0.0mcmc0.9-7
MCMCglmm2.34MEIGOR1.31.0
memoise2.0.1MEMSS0.9-3
Metrics0.1.4mi1.1
mice3.15.0microbenchmark1.4.9
mime0.12miniUI0.1.1.1
minpack.lm1.2-3minqa1.2.5
misc3d0.9-1miscTools0.6-26
mitools2.4mixOmics6.22.0
mlbench2.1-3mlmRev1.0-8
mlogit1.1-1mlr30.15.0
mlr3measures0.5.0mlr3misc0.11.0
mnormt2.1.1modeldata1.1.0
modelenv0.1.1ModelMetrics1.2.2.2
modelr0.1.10modeltime1.2.5
modeltools0.2-23moments0.14.1
mondate0.10.02mosaic1.8.4.2
mosaicCore0.9.2.1mosaicData0.20.3
mratios1.4.2multcomp1.4-23
multicool0.1-12multtest2.54.0
munsell0.5.0mvMORPH1.1.7
mvtnorm1.1-3natserv1.0.0
network1.18.1networkD30.4
NISTnls0.9-13nleqslv3.3.4
nloptr2.0.3nls20.3-3
nlstools2.0-0nnls1.4
nortest1.0-4np0.60-17
numbers0.8-5numDeriv2016.8-1.1
odbc1.3.4openssl2.0.6
openxlsx4.2.5.2optextras2019-12.4
optimParallel1.0-2ordinal2022.11-16
padr0.6.2PairedData1.1.1
palmerpenguins0.1.1paradox0.11.1
parallelly1.34.0parsnip1.0.4
partitions1.10-7party1.3-13
partykit1.2-18pastecs1.3.21
patchwork1.1.2pbapply1.7-0
pbivnorm0.6.0pbkrtest0.5.2
pbmcapply1.5.1PBSmapping2.73.2
pcaMethods1.90.0pcaPP2.0-3
pedigree1.4.2PerformanceAnalytics2.0.4
permute0.9-7phangorn2.11.1
phyloseq1.42.0phytools1.5-1
pillar1.8.1pins1.1.0
pixmap0.4-12pkgbuild1.4.0
pkgconfig2.0.3pkgdown2.0.7
pkgload1.3.2PKPDmodels0.3.2
plm2.6-2plogr0.2.0
plot3D1.4plotly4.10.1
plotrix3.8-2pls2.8-1
plyr1.8.8png0.1-8
poLCA1.6.0.1polspline1.1.22
polyclip1.10-4polycor0.8-1
polynom1.4-1posterior1.4.1
prabclus2.3-2pracma2.4.2
praise1.0.0preprocessCore1.60.2
prettyunits1.1.1princurve2.1.6
pROC1.18.0processx3.8.0
prodlim2019.11.13profileModel0.6.1
profvis0.3.7progress1.2.2
progressr0.13.0proj41.0-12
promises1.2.0.1prophet1.0
proto1.0.0proxy0.4-27
PRROC1.3.1ps1.7.2
pscl1.5.5psy1.2
psych2.2.9purrr1.0.1
qap0.1-2qtl1.58
quadprog1.5-8Quandl2.11.0
quantmod0.4.20quantreg5.94
questionr0.7.8QUIC1.1.1
qvalue2.30.0qvcalc1.0.2
R.cache0.16.0R.devices2.17.1
R.filesets2.15.0R.huge0.9.0
R.matlab3.7.0R.methodsS31.8.2
R.oo1.25.0R.rsp0.45.0
R.utils2.12.2R2HTML2.3.3
R2OpenBUGS3.2-3.2.1R2WinBUGS2.1-21
R62.5.1ragg1.2.5
rainbow3.7randomForest4.7-1.1
rappdirs0.3.3rARPACK0.11-0
raster3.6-20ratelimitr0.4.1
rbenchmark1.0.0RBGL1.74.0
rbibutils2.2.13Rcgmin2022-4.30
rcmdcheck1.4.0RColorBrewer1.1-3
Rcpp1.0.10RcppAnnoy0.0.20
RcppArmadillo0.12.0.1.0RcppEigen0.3.3.9.3
RcppParallel5.1.7RcppProgress0.4.2
RcppRoll0.3.0Rcsdp0.1.57.4
RCurl1.98-1.10Rdpack2.4
reactable0.4.4reactR0.4.4
readr2.1.4readstata130.10.1
readxl1.4.2recipes1.0.5
registry0.5-1regress1.3-21
relaxnet0.3-2reliaR0.01
relimp1.0-5rematch1.0.1
rematch22.1.2remotes2.4.2
rentrez1.2.3renv0.17.1
reprex2.0.2reshape0.8.9
reshape21.4.4rex1.2.1
rgl1.0.1RgoogleMaps1.4.5.3
RGraphics3.0-2Rgraphviz2.42.0
rhdf52.42.0rhdf5filters1.10.0
Rhdf5lib1.20.0riingo0.3.1
ritis1.0.0rJava1.0-6
RJDBC0.2-10rjson0.2.21
RJSONIO1.3-1.8rlang1.1.0
rlecuyer0.3-5rmarkdown2.20
rmeta3.0Rmpfr0.9-1
rms6.5-0RMySQL0.10.25
rncl0.8.7robustbase0.95-0
ROCR1.0-11Rook1.2
rotl3.0.14roxygen27.2.3
RPostgreSQL0.7-5rprojroot2.0.3
rredlist0.7.1rsample1.1.1
Rsolnp1.16RSpectra0.16-1
RSQLite2.3.0rstan2.21.8
rstantools2.3.0rstudioapi0.14
Rttf2pt11.3.12RUnit0.4.32
rversions2.1.2rvest1.0.3
Rvmmin2018-4.17.1s21.1.2
S4Vectors0.36.2sandwich3.0-2
sass0.4.5scales1.2.1
scatterplot3d0.3-43ScottKnott1.3-0
SDMTools1.1-221.2sealasso0.1-3
segmented1.6-2selectr0.4-2
sem3.1-15SemiPar1.0-4.2
semTools0.5-6seqinr4.2-23
seriation1.4.2sessioninfo1.2.2
setRNG2022.4-1sets1.0-24
sf1.0-9sfsmisc1.1-14
shape1.4.6shapefiles0.7.2
shiny1.7.4shiny.semantic0.4.3
shinyjs2.1.0shinystan2.6.0
shinythemes1.2.0SimComp3.3
simsem0.5-16sitmo2.0.2
slam0.1-50slider0.3.0
sn2.1.0sna2.7-1
snakecase0.11.0snow0.4-4
snowfall1.84-6.2solrium1.2.0
sourcetools0.1.7-1sp1.6-0
spam2.9-1SparseM1.81
SpatialExtremes2.1-0spatstat3.0-3
spatstat.data3.0-1spatstat.explore3.1-0
spatstat.geom3.1-0spatstat.linnet3.0-6
spatstat.model3.2-1spatstat.random3.1-4
spatstat.sparse3.0-1spatstat.utils3.0-2
spData2.2.2spdep1.2-8
SQUAREM2021.1ssgraph1.15
stabs0.6-4StanHeaders2.21.0-7
statmod1.5.0statnet.common4.8.0
stringi1.7.12stringr1.5.0
strucchange1.5-3styler1.9.1
subplex1.8superml0.5.6
SuppDists1.1-9.7survcomp1.48.0
survey4.1-1survivalROC1.0.3.1
survPresmooth1.1-11svUnit1.0.6
sybil2.2.0synbreedData1.5
sys3.4.1systemfonts1.0.4
tables0.9.10tabnet0.3.0
taxize0.9.100tensor1.5
tensorA0.36.2terra1.7-18
testit0.13testthat3.1.7
textplot0.2.2textshaping0.3.6
TH.data1.1-1threejs0.3.3
tibble3.2.0tidymodels1.0.0
tidyquant1.0.6tidyr1.3.0
tidyselect1.2.0tidytree0.4.2
tidyverse2.0.0tiff0.1-11
timechange0.2.0timeDate4022.108
timeSeries4021.105timetk2.8.2
tinytex0.44tis1.39
tkrplot0.0-27tmvtnorm1.5
topicmodels.etm0.1.0torch0.9.1
torchaudio0.3.1.9000torchdatasets0.3.0
torchvision0.5.0treeio1.22.0
triebeard0.4.1trimcluster0.1-5
tripack1.3-9.1truncnorm1.0-8
truncreg0.2-5tseries0.10-53
tsfeatures1.1TSP1.2-3
TTR0.24.3tune1.0.1
tweenr2.0.2tzdb0.3.0
ucminf1.1-4.1udpipe0.8.11
units0.8-1urca1.3-3
urlchecker1.0.1urltools1.7.3
usethis2.1.6utf81.2.3
uuid1.1-0uwot0.1.14
V84.2.2vcd1.4-11
vctrs0.6.0vegan2.6-4
VGAM1.1-8VGAMdata1.1-8
viridis0.6.2viridisLite0.4.1
visNetwork2.1.2vroom1.6.1
waldo0.4.0warp0.2.0
waveslim1.8.4wavethresh4.7.2
webshot0.5.4whisker0.4.1
widenet0.1-2WikidataQueryServiceR1.0.0
WikidataR2.3.3WikipediR1.5.0
wikitaxa0.4.0withr2.5.0
wk0.7.2word2vec0.3.4
workflows1.1.3workflowsets1.0.0
worrms0.4.2xfun0.37
xgboost1.7.3.1XLConnect1.0.7
xlsx0.6.5xlsxjars0.6.1
XML3.99-0.13xml21.3.3
xopen1.0.0xtable1.8-4
xts0.13.0XVector0.38.0
yaml2.3.7yardstick1.1.0
yulab.utils0.0.6zeallot0.1.0
zip2.2.2zlibbioc1.44.0
zoo1.8-11

The AMI for the virus scan API server using ClamAV is a pre-configured Amazon Machine Image designed to facilitate the setup and deployment of an API server for performing virus scans on data files prior to or after being uploaded into AWS S3 buckets. It includes the ClamAV antivirus software, which is a powerful and widely used open-source solution for detecting and mitigating malware threats.

It provides a streamlined environment for developers to integrate virus scanning capabilities into their applications or systems. With this AMI, users can quickly develop a reliable virus scan solution, ensuring the protection of their files and data from potential malware infections.

ClamAV AntiVirus

ClamAV is an open-source antivirus software designed to detect and protect against a wide range of malware threats on Unix-based systems, including Linux, macOS, and BSD. It is one of the most widely used antivirus solutions for servers and network-based security applications. ClamAV is highly regarded for its effectiveness in identifying viruses, trojans, worms, and other malicious software, making it a crucial tool in safeguarding critical systems from potential threats.

ClamAV operates on a signature-based detection method, where it maintains an extensive database of virus signatures and patterns that are regularly updated to stay current with emerging threats. This enables ClamAV to efficiently scan files, directories, and emails for known malicious code and promptly flag any suspicious activity. Additionally, it offers the option to integrate with various mail servers and web applications, providing real-time scanning and protection.

What sets ClamAV apart is its open-source nature, which fosters a robust community of developers and contributors continuously working to improve its capabilities. This collaborative approach ensures that ClamAV remains a reliable and up-to-date antivirus solution, freely available to the broader community. Whether used as a standalone antivirus or in conjunction with other security tools, ClamAV offers essential protection for systems vulnerable to malware attacks.

IAM Role

To enable the server to download S3 data, an IAM role with the policy AmazonS3ReadOnlyAccess attached is required. This role should be created and associated with the EC2 instance, granting it the necessary access rights.

Security Consideration

To enhance security, it is highly recommended to disable the public IP address associated with the instance. This measure helps restrict access to the API Server and mitigates potential risks.

Network Consideration

It is suggested to deploy this server within the same availability zone as your existing infrastructure to minimize data transfer charges. By colocating the virus scan server and your other resources in the same availability zone, you can leverage the low-cost or free data transfer within the same zone. And it ensures that the virus scan API server operates within the same network environment as your infrastructure, enabling faster and more efficient communication while minimizing data transfer costs.

Cross-Machine File Scanning

If you need to scan files residing on different machines, you can utilize the NFS server enabled on the API server. Here's how:

  • Create a directory on your local machine to store the data you want to scan. For example:

    mkdir /tmp/data-to-scan

  • Mount the NFS shared directory from your Virus Scan Server AMI to your local machine using this command:

    sudo mount -t nfs api-server-ip-address:/elm/shared /tmp/data-to-scan

  • Any files stored in /tmp/data-to-scan on your local machine can be accessed and scanned by the Virus Scan Server AMI via http://api-server-ip-address:8080/api/clamav/scan/file

The NFS client can be installed using

sudo apt install nfs-common

and

sudo yum install nfs-utils

for ubuntu-like and amazon-linux-like operating systems, respectively.

Scan an S3 object

After starting the EC2 instance, you can access the API Server using its IP address and the port 8080. For instance, if the IP address is 172.31.39.37, you can perform file scans on the S3 bucket by making requests to http://172.31.39.37:8080/api/clamav/scan/s3/object.

The virus scan API Server is configured to listen on the local address 127.0.0.1:3000. To initiate a virus scan, you can send an HTTP request to http://127.0.0.1:3000/api/clamav/scan/s3/object if the request originates from within the virus scan API server.

curl -d '{"stream": true, "bucket": "elm-bucket-virus-scan", "key": "test/virus_test.txt"}' -H 'Content-Type: application/json' http://172.31.39.37:8080/api/clamav/scan/s3/object 

The three parameters have the following meanings:

  • stream: This parameter determines how the server should handle the file download. When set to false, it means that the server will download the whole file into memory first before saving it to disk. When set to true, the server will stream the file directly to disk in smaller chunks. Using streaming can be advantageous when dealing with large files as it reduces the memory footprint required for the download process. It allows for more efficient resource utilization and enables the server to handle files that might otherwise exceed available memory capacity.

  • bucket: This parameter specifies the name of the S3 bucket from which the file should be retrieved.

  • key: This parameter represents the key of the file within the S3 bucket. It specifies the specific file that should be downloaded and scanned.

Response

A json format string will be returned. The possible return codes are 0, 1, 2, and 99.

  • Clean:
{"code":0,"message":"OK"}
  • Infected: For example, when Eicar-Signature is identified, the response would be
{"code":1,"message":"Eicar-Signature FOUND"}
  • Scan Errors: For example, when having file access error, the response would be
{"code":2,"message":"Can't access file /tmp/test/file"}
  • Other Errors: For example, when the IAM role is not properly set, the response would be
{"code":99,"message":"no credentials in the property bag"}

Scan a local file on the API Server

you can perform file scans on local files by making requests to http://172.31.39.37:8080/api/clamav/scan/file.

curl -d '{"file": "/tmp/test.txt"}' -H 'Content-Type: application/json' http://172.31.39.37:8080/api/clamav/scan/file

Shell

curl -d '{"stream": true, "bucket": "elm-bucket-virus-scan", "key": "test/virus_test.txt"}' -H 'Content-Type: application/json' http://172.31.39.37:8080/api/clamav/scan/s3/object 

Python

import requests
import json

def elm_scan_object(url, stream, bucket, key):
    # Define the payload as a dictionary
    payload = {
		"stream": stream,
        "bucket": bucket,
        "key": key
    }

    # Set the headers
    headers = {
        "Content-Type": "application/json"
    }

    # Send a POST request to the API endpoint
    response = requests.post(url, data=json.dumps(payload), headers=headers)

    # Check the response status code
    if response.status_code == 200:
        # Request was successful
        data = response.json()  # Extract the JSON data from the response
        return data
    else:
        # Request was not successful
        print(f"Request failed with status code: {response.status_code}")
        return None

if __name__ == '__main__':        
    result = elm_scan_object(
        url = "http://172.31.39.37:8080/api/clamav/scan/s3/object", \
		stream = True, \
        bucket = 'elm-bucket-virus-scan', \
        key = 'virus_test.txt')
    
    if result:
        print(result)
        print(result['code'])
        print(result['message'])

JavaScript

const axios = require('axios');

async function elmScanObject(url, stream, bucket, key) {
  try {
    const payload = {
	  stream,
      bucket,
      key,
    };

    const headers = {
      'Content-Type': 'application/json',
    };

    const response = await axios.post(url, payload, { headers });

    if (response.status === 200) {
      return response.data;
    } else {
      console.log(`Request failed with status code: ${response.status}`);
      return null;
    }
  } catch (error) {
    console.error('An error occurred:', error.message);
    return null;
  }
}

async function main() {
  const url = 'http://172.31.39.37:8080/api/clamav/scan/s3/object';
  const stream = true;
  const bucket = 'elm-bucket-virus-scan';
  const key = 'virus_test.txt';

  const result = await elmScanObject(url, stream, bucket, key);

  if (result) {
    console.log(result);
    console.log(result.code);
    console.log(result.message);
  }
}

main();

Dart

import 'dart:convert';
import 'package:http/http.dart' as http;

Future<Map<String, dynamic>?> elmScanObject(String url, bool stream, String bucket, String key) async {
  try {
    final payload = {
      'stream': stream,
      'bucket': bucket,
      'key': key,
    };

    final headers = {
      'Content-Type': 'application/json',
    };

    final response = await http.post(Uri.parse(url), headers: headers, body: jsonEncode(payload));

    if (response.statusCode == 200) {
      return jsonDecode(response.body);
    } else {
      print('Request failed with status code: ${response.statusCode}');
      return null;
    }
  } catch (error) {
    print('An error occurred: $error');
    return null;
  }
}

void main() async {
  final url = 'http://172.31.39.37:8080/api/clamav/scan/s3/object';
  final stream = true;
  final bucket = 'elm-bucket-virus-scan';
  final key = 'virus_test.txt';

  final result = await elmScanObject(url, stream, bucket, key);

  if (result != null) {
    print(result);
    print(result['code']);
    print(result['message']);
  }
}

Go

package main

import (
	"bytes"
	"encoding/json"
	"fmt"
	"io/ioutil"
	"net/http"
)

func elmScanObject(url string, stream bool, bucket string, key string) (map[string]interface{}, error) {
	payload := map[string]interface{}{
		"stream": stream,
		"bucket": bucket,
		"key":    key,
	}

	payloadBytes, err := json.Marshal(payload)
	if err != nil {
		return nil, err
	}

	req, err := http.NewRequest("POST", url, bytes.NewBuffer(payloadBytes))
	if err != nil {
		return nil, err
	}

	req.Header.Set("Content-Type", "application/json")

	client := &http.Client{}
	resp, err := client.Do(req)
	if err != nil {
		return nil, err
	}
	defer resp.Body.Close()

	respBody, err := ioutil.ReadAll(resp.Body)
	if err != nil {
		return nil, err
	}

	if resp.StatusCode == http.StatusOK {
		var data map[string]interface{}
		err = json.Unmarshal(respBody, &data)
		if err != nil {
			return nil, err
		}
		return data, nil
	} else {
		return nil, fmt.Errorf("Request failed with status code: %d", resp.StatusCode)
	}
}

func main() {
	url := "http://172.31.39.37:8080/api/clamav/scan/s3/object"
	stream := true
	bucket := "elm-bucket-virus-scan"
	key := "virus_test.txt"

	result, err := elmScanObject(url, stream, bucket, key)
	if err != nil {
		fmt.Println("An error occurred:", err)
		return
	}

	if result != nil {
		fmt.Println(result)
		fmt.Println(result["code"])
		fmt.Println(result["message"])
	}
}

Version 1.2.1.1

Enabled AlertExceedsMax.

Files exceeding the MaxFileSize (100M), MaxScanSize (400M), or MaxRecursion (10) limit will be flagged with the virus name starting with "Heuristics.Limits.Exceeded".

If your scan is expected to trigger the alert, please contact us at support@elmcomputing.io

API endpoints

  • http://ip-address:8080/api/clamav/scan/s3/object

  • http://ip-address:8080/api/clamav/scan/file

Version 1.2.1.0

Updated clamav to 1.2.1 and ubuntu to 22.04.

API endpoints

  • http://ip-address:8080/api/clamav/scan/s3/object

  • http://ip-address:8080/api/clamav/scan/file

Version 1.1.0.1

Applied security patching and Enabled NSF Server such that the API server can be used to scan the files on other machines.

With this new feature, implementing it into your existing application is straightforward. Here's how you can do it:

  • Install the NFS client on your existing EC2 instance.

  • Mount the shared folder, /elm/shared, located on the API Server, to your existing EC2 instance. You can choose a destination directory for this, for example, /tmp/data-to-scan.

  • Once the folder is mounted, any files placed into /tmp/data-to-scan can be seamlessly scanned using the API Server, as if these files were stored locally in the /elm/shared folder on the API Server.

API endpoints

  • http://ip-address:8080/api/clamav/scan/s3/object

  • http://ip-address:8080/api/clamav/scan/file

Version 1.1.0.0

  • Updated ClamAV to 1.1.0

  • Enabled detecting OLE2 files containing VBA macros, which were not detected by signatures will be marked as "Heuristics.OLE2.ContainsMacros".

  • The AMI version naming convention has been changed to refer to the ClamAV version.

API endpoints

  • http://ip-address:8080/api/clamav/scan/s3/object

  • http://ip-address:8080/api/clamav/scan/file

After the EC2 instance is started, you can access the Bayesian Workbench RStudio Server with its public IP address. For example, if the IP address is 10.11.12.13, typing http://10.11.12.13 in the browser will bring you to the following startup page:

main page

The default username is ruser and the password is the EC2 instance ID that has the form of i-0c7fadc4dc193eca7.

Bayesian Statistics Workbench for R on AWS Marketplace

The steps of starting this workbench is the same with the procedure of spinning up an instance of our RStudio Server product.

Subscribe to the AMI

main page

Continue to configure the EC2 instance

main page

Choose a region close to your location

main page

Choose an instance type

t3.xlarge is a good starting point for testing. Once everything is confirmed to work, you can switch to other instance types (more CPUs, high memory) that fit your need. main page

Create security group for the Rstudio Server

If you do not already have an SSH key pair, please generate a new one to use when logging into the RStudio Server.

main page

Create SSH key pair with default values

main page

Choose "allow" to download your SSH key pair

main page

Launch your EC2 instance

main page

Go to EC2 console

main page

Select the new EC2 instance

main page

Public IP address and Instance ID

main page

Access the login page

main page

Enter RStudio IDE

main page

Change instance type

To change the instance type once the server is tested, please go to "Launch instances", "Instance settings", and then "Change instance type".

RStudio Server

R: 4.3.2

rstudio-server: 2023.09.01-494

Intel MKL for blas and lapack

Release Notes

Install R, rstudio-server, Intel MKL and Bayesian statistics packages.

R: 4.3.2; rstudio-server: 2023.09.1-494

R packages (672)

packageversionpackageversion
abc2.2.1abc.data1.0
abcrf1.9abglasso0.1.1
abind1.4-5abtest1.0.1
acebayes1.10AdMit2.1.9
ammiBayes1.0-1AnaCoDa0.1.4.4
anytime0.3.9AovBay0.1.0
ape5.7-1APFr1.0.2
approximator1.2-8ArchaeoChron0.1
ArchaeoPhases1.8arm1.13-1
ash1.0-15ashr2.2-63
askpass1.2.0assertthat0.2.1
astsa2.0BACCO2.1-0
BACCT1.0backports1.4.1
baggr0.7.6bain0.2.10
BaM1.0.3bama1.3.0
bamdit3.4.0bamlss1.2-2
bang1.0.2BANOVA1.2.1
BART2.9.4bartBMA1.0
bartCause1.0-6bartcs1.2.0
bartMachine1.3.4.1bartMachineJARs1.2.1
BAS1.6.4basad0.3.0
base64enc0.1-3basicMCMCplots0.2.7
BaSkePro0.1.0BASS1.3.1
baycn1.2.0bayefdr0.2.1
bayes4psy1.2.12bayesAB1.1.3
bayesammi0.1.0bayesanova1.5
BayesARIMAX0.1.1BayesBinMix1.4.1
bayesbio1.0.0bayesboot0.2.2
BayesBP1.1bayesbr0.0.1.0
BayesCACE1.2.3BayesCombo1.0
BayesComm0.1-2bayescopulareg0.1.3
bayescount0.9.99-8BayesCR2.1
bayesCT0.99.3BayesCTDesign0.6.1
BayesDA2012.04-1bayesDccGarch3.0.4
bayesdfa1.3.1bayesdistreg0.1.0
bayesDP1.3.6BayesFactor0.9.12-4.5
BayesFM0.1.5bayesforecast1.0.1
bayesGAM0.0.2bayesGARCH2.1.10
BayesGOF5.2BayesGPfit1.1.0
BayesGWQS0.1.1bayesian0.0.9
bayesianETAS1.0.3Bayesiangammareg0.1.0
BayesianGLasso0.2.0BayesianLaterality0.1.2
BayesianNetwork0.3BayesianTools0.1.8
bayesImageS0.6-1BayesLCA1.9
bayesLife5.2-0bayeslincom1.3.0
BayesLN0.2.8BayesLogit2.1
bayeslongitudinal0.1.0bayesm3.1-6
BayesMallows1.4.0BayesMassBal1.1.0
bayesmeta3.3bayesmix0.7-6
bayesplot1.10.0bayesQR2.4
bayestestR0.13.1bayesTFR7.4-2
BayesTools0.2.16BayesTree0.3-1.4
BayesVarSel2.2.5BayesX0.3-3
BAYSTAR0.2-10BCBCSF1.0-1
BCE2.2.0Bchron4.7.6
bcp4.0.3BDgraph2.72
Bergm5.0.6BH1.81.0-1
bigmemory4.6.1bigmemory.sri0.1.6
bit4.0.5bit644.0.5
bitops1.0-7blavaan0.5-2
BLR1.6BMA3.18.17
bmixture1.7BMS0.3.5
bnlearn4.9BNSP2.2.3
boa1.1.8-2Bolstad0.2-41
Bolstad21.0-29Boom0.9.11
BoomSpikeSlab1.2.5bqtl1.0-35
brew1.0-8bridgesampling1.1-2
brio1.1.3brms2.20.4
Brobdingnag1.2-9broom1.0.5
bsamGP1.2.4bslib0.5.1
bspec1.6bspmma0.1-2
bsts0.9.9bsvars2.0.0
BVAR1.0.4bvarsv1.1
ca0.71.1cachem1.0.8
calibrator1.2-8callr3.7.3
car3.1-2CARBayes6.0
CARBayesdata3.0CARBayesST4.0
carData3.0-5caTools1.18.2
causact0.5.3CausalImpact1.3.0
chandwich1.1.6checkmate2.3.0
CholWishart1.1.2chron2.3-61
CircSpaceTime0.9.0CircStats0.2-6
circular0.5-0classInt0.4-10
cli3.6.1clipr0.8.0
clue0.3-65cmdstanr0.6.1
coalescentMCMC0.4-4coalitions0.6.24
coda0.19-4colorspace2.1-0
colourpicker1.3.0combinat0.0-8
commonmark1.9.0compare0.2-6
CompQuadForm1.4.3config0.3.2
contfrac1.1-12corpcor1.6.10
corrplot0.92cowplot1.1.1
CPBayes1.1.0cpp110.4.6
crayon1.5.2crosstalk1.2.0
ctv0.9-5cubature2.1.0
curl5.1.0cvAUC1.1.4
data.table1.14.8datawizard0.9.0
dbarts0.9-23DBI1.1.3
dclone2.3-2deBInfer0.4.4
deldir1.0-9dendextend1.17.1
densEstBayes1.0-2.2DEoptimR1.1-3
desc1.4.2deSolve1.38
DHARMa0.4.6DiagrammeR1.0.10
diffobj0.3.5digest0.6.33
dina2.0.0DIRECT1.1.0
dirichletprocess0.4.2distfree.cr1.5.1
distributional0.3.2distributions30.2.1
DistributionUtils0.6-1dlm1.1-6
doParallel1.0.17doRNG1.8.6
dotCall641.1-0downloader0.4
dplyr1.1.3DT0.30
dtw1.23-1dygraphs1.1.1.6
e10711.7-13EbayesThresh1.4-12
ebdbNet1.2.8edina0.1.1
egg0.4.5eha2.11.1
eigenmodel1.11ellipse0.5.0
ellipsis0.3.2elliptic1.4-0
emg1.0.9emulator1.2-21
ensembleBMA5.1.8EntropyMCMC1.0.4
ergm4.5.0errum0.0.3
etrunct0.1evaluate0.23
evd2.3-6.1exdex1.2.2
expm0.999-7extraDistr1.9.1
extrafont0.19extrafontdb1.0
fansi1.0.5farver2.1.1
fastmap1.1.1fastmatch1.1-4
fdrtool1.2.17fftwtools0.9-11
fields15.2FME1.3.6.3
FNN1.1.3.2fontawesome0.5.2
forcats1.0.0foreach1.5.2
forecast8.21.1forestplot3.1.3
Formula1.2-5fracdiff1.5-2
fresh0.2.0fs1.6.3
future1.33.0future.apply1.11.0
gam1.22-2gamlss.dist6.1-1
gap1.5-3gap.datasets0.0.6
gclus1.3.2GeneralizedHyperbolic0.8-4
generics0.1.3geojsonsf2.0.3
geometries0.2.3geometry0.4.7
geoR1.9-2GGally2.1.2
ggalt0.4.0ggcharts0.2.1
ggExtra0.10.1ggforce0.4.1
ggmcmc1.5.1.1ggplot23.4.4
ggraph2.1.0ggrepel0.9.4
ggridges0.5.4ggvis0.4.8
GIGrvg0.8glasso1.11
glmnet4.1-8globals0.16.2
glue1.6.2gmm1.8
gmp0.7-2gplots3.1.3
gRain1.4.0graphlayouts1.0.2
gRbase2.0.0greta0.4.3
gridExtra2.3gsl2.1-8
gtable0.3.4gtools3.9.4
hardhat1.3.0haven2.5.3
hbsae1.2HDInterval0.2.4
hdrcde3.4heatmaply1.5.0
here1.0.1hett0.3-3
highcharter0.9.4highr0.10
Hmisc5.1-1hms1.1.3
htmlTable2.4.2htmltools0.5.7
htmlwidgets1.6.2httpuv1.6.12
httr1.4.7hypergeo1.2-13
IDPmisc1.1.20igraph1.5.1
inline0.3.19insight0.19.6
interp1.1-4intervals0.15.4
invgamma1.1irlba2.3.5.1
isoband0.2.7iterators1.0.14
iterLap1.1-4itertools0.1-3
jjb0.1.1jomo2.7-6
jpeg0.1-10jquerylib0.1.4
jsonify1.2.2jsonlite1.8.7
kernlab0.9-32knitr1.45
ks1.14.1label.switching1.8
labeling0.4.3LaplacesDemon16.1.6
lars1.3later1.3.1
latticeExtra0.6-30lavaan0.6-16
LAWBL1.5.0lazyeval0.2.2
leafem0.2.3leaflet2.2.0
leaflet.providers2.0.0leafpop0.1.0
leaps3.1LearnBayes2.15.1
lhs1.1.6lifecycle1.0.3
limSolve1.5.7linprog0.9-4
listenv0.9.0lme41.1-35.1
lmm1.4lmtest0.9-40
locfit1.5-9.8loo2.6.0
lpSolve5.6.19lpSolveAPI5.5.2.0-17.10
lubridate1.9.3magic1.6-1
magrittr2.0.3maps3.4.1.1
maptree1.4-8mapview2.11.2
markdown1.11mathjaxr1.6-0
matrixcalc1.0-6MatrixModels0.5-3
matrixStats1.0.0maxLik1.5-2
MBA0.1-0mclust6.0.0
mcmc0.9-7mcmcensemble3.0.0
MCMCglmm2.35MCMCpack1.6-3
mcmcse1.5-0MCMCvis0.16.3
memoise2.0.1metadat1.2-0
metafor4.4-0metRology0.9-28-1
mice3.16.0mime0.12
miniUI0.1.1.1minpack.lm1.2-4
minqa1.2.6misc3d0.9-1
miscTools0.6-28missForest1.5
mitml0.4-5mixsqp0.3-48
mixtools2.0.0mlbench2.1-3.1
mlogitBMA0.1-7mnormt2.1.1
MNP3.1-4mombf3.4.2
moments0.14.1movMF0.2-7
msm1.7multicool0.1-12
munsell0.5.0mvnfast0.2.8
mvtnorm1.2-3ncvreg3.14.1
network1.18.1NetworkChange0.8
networkD30.4nimble1.0.1
nleqslv3.3.4nloptr2.0.3
nnls1.5nonnest20.5-6
nortest1.0-4numDeriv2016.8-1.1
openEBGM0.9.1openssl2.1.1
openxlsx4.2.5.2optimx2023-10.21
ordinal2022.11-16orthopolynom1.0-6.1
overlapping2.1pan1.9
parallelly1.36.0parsnip1.1.1
patchwork1.1.3pbapply1.7-2
pbivnorm0.6.0pbkrtest0.5.2
PBSddesolve1.13.3pcaPP2.0-3
pcFactorStan1.5.4permute0.9-7
phangorn2.11.1pillar1.9.0
pkgbuild1.4.2pkgconfig2.0.3
pkgload1.3.3plot3D1.4
plotly4.10.3plotMCMC2.0.1
plotrix3.8-3plyr1.8.9
png0.1-8polyclip1.10-6
polynom1.4-1posterior1.5.0
pracma2.4.2praise1.0.0
PReMiuM3.2.10prettyunits1.2.0
prevalence0.4.1pROC1.18.5
processx3.8.2progress1.2.2
progressr0.14.0proj41.0-13
promises1.2.1prophet1.0
proxy0.4-27ps1.7.5
pscl1.5.5.1psych2.3.9
purrr1.0.2qap0.1-2
qgam1.3.4qgraph1.9.8
qs0.25.5quadprog1.5-8
quantmod0.4.25quantreg5.97
QuickJSR1.0.7R2jags0.7-1
R2OpenBUGS3.2-3.2.1R2WinBUGS2.1-21
R62.5.1ramps0.6.18
randomForest4.7-1.1randtoolbox2.0.4
ranger0.15.1RANN2.6.1
rapidjsonr1.2.0RApiSerialize0.1.2
rappdirs0.3.3raster3.6-26
Rbeast0.9.9rbibutils2.2.16
RColorBrewer1.1-3Rcpp1.0.11
RcppArmadillo0.12.6.6.0RcppDist0.1.1
RcppEigen0.3.3.9.4RcppParallel5.1.7
RcppProgress0.4.2RcppRoll0.3.0
RcppTN0.2-2RcppTOML0.2.2
RCurl1.98-1.13Rdpack2.5
readr2.1.4REBayes2.54
registry0.5-1relations0.6-13
rematch22.1.2reshape0.8.9
reshape21.4.4reticulate1.34.0
revdbayes1.5.2rgen0.0.1
Rglpk0.6-5RInside0.2.18
rintrojs0.3.3rjags4-14
rJava1.0-6rjson0.2.21
rlang1.1.2rle0.9.2
rlist0.4.6.2rmarkdown2.25
Rmpfr0.9-3rmutil1.1.10
rngtools1.5.2rngWELL0.10-9
RoBMA3.1.0robustbase0.99-0
ROCR1.0-11rootSolve1.8.2.4
rprojroot2.0.4rrcov1.7-4
rrum0.2.0RSGHB1.2.2
rstan2.32.3rstanarm2.26.1
rstantools2.3.1.1rstiefel1.0.1
rstudioapi0.15.0Rttf2pt11.3.12
runjags2.2.2-1.1Runuran0.38
rust1.4.1rvest1.0.3
s21.1.4sandwich3.0-2
sass0.4.7satellite1.0.4
sbgcop0.980scales1.2.1
segmented1.6-4selectr0.4-2
SemiPar1.0-4.2seriation1.5.1
servr0.27sets1.0-24
sf1.0-14sfheaders0.4.3
sgd1.1.1shape1.4.6
shapefiles0.7.2shiny1.7.5.1
shinyAce0.4.2shinybrms1.8.0
shinycssloaders1.0.0shinydashboard0.7.2
shinydashboardPlus2.0.3shinyjs2.1.0
shinystan2.6.0shinythemes1.2.0
shinyWidgets0.8.0shrinkTVP2.0.6
simcdm0.1.1skmeans0.2-16
slam0.1-50sn2.1.1
sna2.7-1sourcetools0.1.7-1
sp2.1-1spacetime1.3-0
spam2.10-0SparseM1.81
spBayes0.4-6spData2.3.0
spdep1.2-8spikeslab1.1.6
spikeSlabGAM1.1-19splancs2.01-44
spTimer3.3.2SQUAREM2021.1
ssgraph1.15ssMousetrack1.1.6
StanHeaders2.26.28statmod1.5.0
statnet.common4.9.0stochvol3.2.1
stringfish0.15.8stringi1.7.12
stringr1.5.0SuperLearner2.0-28.1
svglite2.1.2sys3.4.2
systemfonts1.0.5tensorA0.36.2
tensorflow2.14.0terra1.7-55
testthat3.2.0tfautograph0.3.2
tfruns1.5.1tgp2.4-21
threejs0.3.3tibble3.2.1
tidygraph1.2.3tidyr1.3.0
tidyselect1.2.0timechange0.2.0
timeDate4022.108tinytex0.48
tmvnsim1.0-2tmvtnorm1.5
toOrdinal1.3-0.0truncdist1.0-2
truncnorm1.0-9trust0.1-8
tseries0.10-54TSP1.2-4
TTR0.24.3tweenr2.0.2
tzdb0.4.0ucminf1.2.0
units0.8-4urca1.3-3
utf81.2.4uuid1.1-1
vctrs0.6.4vegan2.6-4
VGAM1.1-9vglmer1.0.3
viridis0.6.4viridisLite0.4.2
visNetwork2.1.2vroom1.6.4
waiter0.2.5waldo0.5.2
wavethresh4.7.2webshot0.5.5
whisker0.4.1withr2.5.2
wk0.9.0wpp20191.1-1
xfun0.41XML3.99-0.15
xml21.3.5xtable1.8-4
xts0.13.1yaml2.3.7
yesno0.1.2zic0.9.1
zip2.3.0zoo1.8-12

After the EC2 instance is started, you can access the Bioconductor Workbench RStudio Server with its public IP address. For example, if the IP address is 10.11.12.13, typing http://10.11.12.13 in the browser will bring you to the following startup page:

main page

The default username is ruser and the password is the EC2 instance ID that has the form of i-0c7fadc4dc193eca7.

Bioconductor Workbench for R on AWS Marketplace

The steps of starting this workbench is the same with the procedure of spinning up an instance of our RStudio Server product.

Subscribe to the AMI

main page

Continue to configure the EC2 instance

main page

Choose a region close to your location

main page

Choose an instance type

t3.xlarge is a good starting point for testing. Once everything is confirmed to work, you can switch to other instance types (more CPUs, high memory) that fit your need. main page

Create security group for the Rstudio Server

If you do not already have an SSH key pair, please generate a new one to use when logging into the RStudio Server.

main page

Create SSH key pair with default values

main page

Choose "allow" to download your SSH key pair

main page

Launch your EC2 instance

main page

Go to EC2 console

main page

Select the new EC2 instance

main page

Public IP address and Instance ID

main page

Access the login page

main page

Enter RStudio IDE

main page

Change instance type

To change the instance type once the server is tested, please go to "Launch instances", "Instance settings", and then "Change instance type".

RStudio Server

R: 4.3.0

rstudio-server: 2023.12.1-402

Release Notes

Install popular Bioconductor packages.

R: 4.3.0; rstudio-server: 2023.12.1-402

R packages (3829)

packageversionpackageversion
a41.50.1a4Base1.50.0
a4Classif1.50.0a4Core1.50.0
a4Preproc1.50.0a4Reporting1.50.0
ABarray1.70.0abind1.4-5
abseqR1.20.0ABSSeq1.56.0
acde1.32.0ACE1.20.0
aCGH1.80.0ACME2.58.0
ada2.0-5adabag5.0
ADaCGH22.42.0ADAM1.18.0
ADAMgui1.18.0additivityTests1.1-4.1
adductData1.18.0adductomicsR1.18.0
ade41.7-22adehabitatLT0.3.27
adehabitatMA0.3.16ADGofTest0.3
ADImpute1.12.0admisc0.35
adSplit1.72.0adverSCarial1.0.0
AffiXcan1.20.0affxparser1.74.0
affy1.80.0affycomp1.78.0
affyContam1.60.0affycoretools1.74.0
affydata1.50.0affyILM1.54.0
affyio1.72.0affylmGUI1.76.0
affyPLM1.78.0AffyRNADegradation1.48.0
AGDEX1.50.0aggregateBioVar1.12.0
aggregation1.0.1agilp3.34.0
AgiMicroRna2.52.0agricolae1.3-7
AHMassBank1.2.1AhoCorasickTrie0.1.2
AICcmodavg2.3-3AIMS1.34.0
airpart1.10.0airway1.22.0
akima0.6-3.4akmbiclust0.1.0
alabama2023.1.0alabaster1.2.0
alabaster.base1.2.1alabaster.bumpy1.2.0
alabaster.files1.0.0alabaster.mae1.2.0
alabaster.matrix1.2.0alabaster.ranges1.2.0
alabaster.sce1.2.0alabaster.schemas1.2.0
alabaster.se1.2.0alabaster.spatial1.2.0
alabaster.string1.2.0alabaster.vcf1.2.0
ALDEx21.34.0alevinQC1.18.0
AlgDesign1.2.1ALL1.44.0
AllelicImbalance1.40.0alluvial0.1-2
AlphaBeta1.16.0AlpsNMR4.4.0
altcdfenvs2.64.0amap0.8-19
AMARETTO1.18.0AMOUNTAIN1.28.0
amplican1.24.0analogue0.17-6
Anaquin2.26.0ANCOMBC2.4.0
AneuFinder1.30.0AneuFinderData1.30.0
ANF1.24.1animalcules1.18.3
animation2.7annaffy1.74.0
anndata0.7.5.6annmap1.44.0
annotate1.80.0AnnotationDbi1.64.1
AnnotationFilter1.26.0AnnotationForge1.44.0
AnnotationHub3.10.0AnnotationHubData1.32.1
annotationTools1.76.0annotatr1.28.0
anota1.50.0anota2seq1.24.0
antiProfiles1.42.0AnVIL1.14.2
AnVILBilling1.12.0AnVILPublish1.12.0
AnVILWorkflow1.2.0anytime0.3.9
aod1.3.3aods30.4-1.2
APAlyzer1.16.0apcluster1.4.11
apComplex2.68.0ape5.7-1
apeglm1.24.0APL1.6.1
aplot0.2.2appreci8R1.20.2
archive1.1.7argparse2.2.2
aricode1.0.3arm1.13-1
aroma.affymetrix3.2.2aroma.apd0.7.0
aroma.core3.3.1aroma.light3.32.0
ArrayExpress1.62.0arrayhelpers1.1-0
arrayMvout1.60.0arrayQuality1.80.0
arrayQualityMetrics3.58.0ARRmData1.38.0
ARRmNormalization1.42.0arrow15.0.1
artMS1.20.0arules1.7-7
ASAFE1.28.0ASEB1.46.3
ASGSCA1.36.0ash1.0-15
ashr2.2-63ASICS2.18.1
askpass1.2.0ASpli2.12.0
assertive.base0.0-9assertive.files0.0-2
assertive.numbers0.0-2assertive.sets0.0-3
assertthat0.2.1AssessORF1.20.0
ASSET2.20.0ASSIGN1.38.0
ASURAT1.6.0ATACCoGAPS1.4.0
ATACseqQC1.26.0ATACseqTFEA1.4.0
atena1.8.0atSNP1.18.0
attempt0.3.1attract1.54.0
AUCell1.24.0autonomics1.10.2
available1.1.0AWFisher1.16.0
aws2.5-5aws.s30.3.21
aws.signature0.6.0awsMethods1.1-1
awst1.10.0BaalChIP1.28.0
babelgene22.9backbone2.1.3
backports1.4.1bacon1.30.0
BADER1.40.0BadRegionFinder1.30.0
BAGS2.42.0ballgown2.34.0
bambu3.4.0bamlss1.2-3
bamsignals1.34.0BANDITS1.18.1
bandle1.6.0banocc1.26.0
barcodetrackR1.10.0base642.0.1
base64enc0.1-3base64url1.4
basecallQC1.26.0baseline1.3-5
BaseSpaceR1.46.0Basic4Cseq1.38.0
BASiCS2.14.0BASiCStan1.4.0
BasicSTARRseq1.30.0basilisk1.14.3
basilisk.utils1.14.1batchelor1.18.1
BatchJobs1.9BatchQC1.30.0
batchtools0.9.17BayesKnockdown1.28.0
bayesm3.1-6BayesSpace1.12.0
bayNorm1.20.0baySeq2.36.0
BB2019.10-1BBCAnalyzer1.32.0
BBmisc1.13bbmle1.0.25.1
bbotk0.8.0bcellViper1.38.0
BCRANK1.64.0bcSeq1.24.0
bdsmatrix1.3-7beachmat2.18.1
beachmat.hdf51.0.0beadarray2.52.0
beadarraySNP1.68.0BeadDataPackR1.54.0
beanplot1.3.1BEARscc1.22.0
BEAT1.40.0BEclear2.18.0
beer1.6.0beeswarm0.4.0
bench1.1.3benchdamic1.8.2
benchmarkme1.0.8benchmarkmeData1.0.4
bestNormalize1.9.1betareg3.1-4
bezier1.1.2BG21.2.0
BgeeCall1.18.1BgeeDB2.28.0
bgx1.68.3BH1.84.0-0
BHC1.54.0BiasedUrn2.0.11
bibtex0.5.1BicARE1.60.0
biclust2.0.3.1BiFET1.22.0
biganalytics1.1.21bigassertr0.1.6
BiGGR1.38.0biglm0.9-2.1
bigmelon1.28.0bigmemory4.6.4
bigmemory.sri0.1.8bigparallelr0.3.2
bigrquery1.5.1bigstatsr1.5.12
billboarder0.4.1BindingSiteFinder2.0.0
binom1.1-1.1binr1.1.1
bioassayR1.40.0Biobase2.62.0
biobroom1.34.0biobtreeR1.14.0
bioCancer1.30.8BioCartaImage1.0.0
BiocBaseUtils1.4.0BiocBook1.0.0
BiocCheck1.38.2BiocFHIR1.4.0
BiocFileCache2.10.1BiocGenerics0.48.1
biocGraph1.64.0BiocHail1.2.0
BiocHubsShiny1.2.0BiocIO1.12.0
BiocManager1.30.22BiocNeighbors1.20.2
BioCor1.26.0BiocParallel1.36.0
BiocPkgTools1.20.0BiocSet1.16.1
BiocSingular1.18.0BiocSklearn1.24.0
BiocStyle2.30.0biocthis1.12.0
BiocVersion3.18.1biocViews1.70.0
BiocWorkflowTools1.28.0biodb1.10.0
biodbChebi1.8.0biodbExpasy1.6.0
biodbHmdb1.8.0biodbKegg1.8.0
biodbLipidmaps1.8.0biodbMirbase1.5.0
biodbNcbi1.6.0biodbNci1.6.0
biodbUniprot1.8.0bioDist1.74.0
biomaRt2.58.2biomartr1.0.7
biomformat1.30.0BioMVCClass1.70.0
biomvRCNS1.42.2BioNAR1.4.4
BioNERO1.10.1BioNet1.62.0
BioNetStat1.22.0BioQC1.30.0
biosigner1.30.0Biostrings2.70.3
BioTIP1.16.0biotmle1.26.0
biovizBase1.50.0BiRewire3.34.0
biscuiteer1.16.0biscuiteerData1.16.0
BiSeq1.42.0bit4.0.5
bit644.0.5bitops1.0-7
biwt1.0.1blacksheepr1.16.0
bladderbatch1.40.0BlandAltmanLeh0.3.1
blima1.36.0BLMA1.26.0
blme1.0-5blob1.2.4
blockmodeling1.1.5BloodGen3Module1.10.0
bluster1.12.0BMA3.18.17
bmp0.3bnbc1.24.2
bnem1.10.0bnlearn4.9.3
bnstruct1.0.15BOBaFIT1.6.0
bookdown0.38BoolNet2.1.9
bootstrap2019.6borealis1.6.0
BPRMeth1.28.0BRAIN1.48.0
brainflowprobes1.16.0branchpointer1.28.0
breakpointR1.20.0breakpointRdata1.20.0
breastCancerVDX1.40.0brendaDb1.16.0
brew1.0-10BRGenomics1.14.1
brglm0.7.2BridgeDbR2.12.0
brio1.1.4BRISC1.0.5
broom1.0.5broom.helpers1.14.0
broom.mixed0.2.9.4BrowserViz2.24.0
bs4Dash2.3.3BSDA1.2.2
BSgenome1.70.2BSgenome.Celegans.UCSC.ce21.4.0
BSgenome.Drerio.UCSC.danRer71.4.0BSgenome.Ecoli.NCBI.200808051.3.1000
BSgenome.Hsapiens.1000genomes.hs37d50.99.1BSgenome.Hsapiens.NCBI.GRCh381.3.1000
BSgenome.Hsapiens.UCSC.hg181.3.1000BSgenome.Hsapiens.UCSC.hg191.4.3
BSgenome.Hsapiens.UCSC.hg381.4.5BSgenome.Mmusculus.UCSC.mm101.4.3
BSgenome.Mmusculus.UCSC.mm91.4.0BSgenomeForge1.2.1
bslib0.6.1bsplus0.1.4
bsseq1.38.0BubbleTree2.32.0
BufferedMatrix1.66.0BufferedMatrixMethods1.66.0
bugsigdbr1.8.4BUMHMM1.26.0
bumphunter1.44.0BumpyMatrix1.10.0
BUS1.58.0BUScorrect1.20.0
BUSpaRse1.16.1BUSseq1.8.0
butcher0.3.3BWStest0.2.3
C500.1.8ca0.71.1
cachem1.0.8CaDrA1.0.2
CAEN1.10.0CAFE1.38.0
CAGEfightR1.22.0cageminer1.8.0
CAGEr2.8.0Cairo1.6-2
calibrate1.7.7callr3.7.5
calm1.16.0CAMERA1.58.0
canceR1.36.7cancerclass1.46.0
capushe1.1.2car3.1-2
carData3.0-5cardelino1.4.0
Cardinal3.4.3CardinalIO1.0.0
caret6.0-94caretEnsemble2.0.3
CARNIVAL2.12.0casper2.36.0
CATALYST1.26.0catdata1.2.4
Category2.68.0categoryCompare1.46.0
CatEncoders0.1.1caTools1.18.2
CausalR1.34.0cba0.2-23
cbaf1.24.0CBEA1.2.0
cBioPortalData2.14.2CBNplot1.2.1
cbpManager1.10.0ccaPP0.3.3
ccdata1.28.0ccfindR1.22.0
ccImpute1.4.0ccmap1.28.0
CCP1.2CCPlotR1.0.0
CCPROMISE1.28.0ccrepe1.38.1
ccTensor1.0.2CDFt1.2
CDI1.0.2celaref1.20.0
celda1.18.1celestial1.4.6
CellaRepertorium1.12.0CellBarcode1.8.1
cellbaseR1.26.0CellBench1.18.0
celldex1.12.0cellHTS22.66.0
CelliD1.10.1cellity1.30.0
CellMapper1.28.0cellmigRation1.10.0
CellMixS1.18.0CellNOptR1.48.0
cellranger1.1.0cellscape1.26.0
CellScore1.22.0CellTrails1.20.0
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SeqVarTools1.40.0seriation1.5.4
servr0.29sesame1.20.0
sesameData1.20.0sessioninfo1.2.2
SEtools1.16.0setRNG2024.2-1
sets1.0-25settings0.2.7
Seurat5.0.2SeuratObject5.0.1
sevenbridges1.32.0sevenC1.22.0
sf1.0-15sfsmisc1.1-17
sftime0.2-0SGCP1.2.0
sgeostat1.0-27SGSeq1.36.0
shades1.4.0shadowtext0.1.3
shape1.4.6.1SharedObject1.16.0
shiny1.8.0shinyAce0.4.2
shinyalert3.0.0shinyBS0.61.1
shinybusy0.3.3shinycssloaders1.0.0
shinycustomloader0.9.0shinyCyJS1.0.0
shinydashboard0.7.2shinydashboardPlus2.0.3
shinyepico1.10.0shinyFeedback0.4.0
shinyFiles0.9.3shinyHeatmaply0.2.0
shinyhelper0.3.2shinyjqui0.4.1
shinyjs2.1.0shinylogs0.2.1
shinymanager1.0.410shinyMatrix0.6.0
shinymeta0.2.0.3shinyMethyl1.38.0
shinypanel0.1.5shinyscreenshot0.2.1
shinythemes1.2.0shinytitle0.1.0
shinytoastr2.2.0shinyTree0.3.1
shinyvalidate0.1.3shinyWidgets0.8.2
ShortRead1.60.0SIAMCAT2.6.0
SICtools1.32.0SIFT.Hsapiens.dbSNP1371.0.0
SigCheck2.34.0sigclust1.1.0.1
sigFeature1.20.0SigFuge1.40.0
siggenes1.76.0sights1.28.0
signal1.8-0signatureSearch1.16.0
signeR2.4.0signifinder1.4.0
SigsPack1.16.0sigsquared1.34.0
SIM1.72.0SIMAT1.34.0
SimBindProfiles1.40.0SimBu1.4.3
SIMD1.20.0SimFFPE1.14.0
similaRpeak1.34.0SIMLR1.28.0
simona1.0.10simpIntLists1.38.0
simpleCache0.4.2simpleSeg1.4.1
simplifyEnrichment1.12.0sincell1.34.0
single1.6.0SingleCellExperiment1.24.0
SingleCellSignalR1.14.0singleCellTK2.12.2
SingleMoleculeFootprinting1.10.0SingleR2.4.1
singscore1.22.0SiPSiC1.2.2
sitadela1.10.0sitePath1.18.0
sitmo2.0.2sizepower1.72.0
sjlabelled1.2.0sjmisc2.8.9
skewr1.34.0skmeans0.2-16
slalom1.24.0slam0.1-50
slider0.3.1slingshot2.10.0
SLqPCR1.68.0sm2.2-6.0
SMAD1.18.0SMAP1.66.0
SmartSVA0.1.3smatr3.4-8
SMITE1.30.0smoother1.1
smoothie1.0-3SmoothWin3.0.0
smurf1.1.5SMVar1.3.4
sn2.1.1sna2.7-2
SNAGEE1.42.0SNAGEEdata1.38.0
snakecase0.11.1snapCGH1.72.0
snapcount1.14.0snifter1.12.0
snm1.50.0snow0.4-4
SnowballC0.7.1snowfall1.84-6.3
SNPediaR1.28.0SNPhood1.32.0
SNPlocs.Hsapiens.dbSNP144.GRCh370.99.20SNPRelate1.36.1
snpStats1.52.0softImpute1.4-1
soGGi1.34.0som0.3-5.1
SomaticSignatures2.38.0SOMNiBUS1.10.0
sonicLength1.4.7sortable0.5.0
SoupX1.6.2sourcetools0.1.7-1
sp2.1-3SpacePAC1.40.0
spacetime1.3-1spam2.10-0
Spaniel1.16.0sparklyr1.8.4
sparrow1.8.0SparseArray1.2.4
SparseM1.81sparseMatrixStats1.14.0
sparseMVN0.2.2sparsenetgls1.20.0
sparsepca0.1.2SparseSignatures2.12.0
sparsesvd0.2-2spaSim1.4.0
SpatialCPie1.18.0spatialDE1.8.1
SpatialDecon1.12.3SpatialExperiment1.12.0
SpatialExtremes2.1-0SpatialFeatureExperiment1.4.0
spatialHeatmap2.8.5SpatialOmicsOverlay1.2.1
SpatialTools1.0.5spatstat3.0-7
spatstat.data3.0-4spatstat.explore3.2-6
spatstat.geom3.2-9spatstat.linnet3.1-4
spatstat.model3.2-10spatstat.random3.2-3
spatstat.sparse3.0-3spatstat.utils3.0-4
spatzie1.8.0spBayes0.4-7
spData2.3.0spdep1.3-3
spdl0.0.5speaq2.7.0
speckle1.2.0specL1.36.0
SpeCond1.56.0Spectra1.12.0
SpectralTAD1.18.0speedglm0.3-5
SPEM1.42.0SPIA2.54.0
SPIAT1.4.1spicyR1.14.3
SpidermiR1.32.0spikeLI2.62.0
spiky1.8.0spkTools1.58.0
splancs2.01-44splatter1.26.0
SpliceWiz1.4.1SplicingFactory1.10.0
SplicingGraphs1.42.0splineTimeR1.30.0
SPLINTER1.28.0splitstackshape1.4.8
splots1.68.0splus2R1.3-5
SpotClean1.4.1SPOTlight1.6.7
spqn1.14.0spsComps0.3.3.0
SPsimSeq1.12.0spsUtil0.2.2
SQLDataFrame1.16.1sqldf0.4-11
SQUADD1.52.0SQUAREM2021.1
squash1.0.9sRACIPE1.18.0
SRAdb1.64.0srnadiff1.22.2
ssc2.1-0sscu2.32.0
sSeq1.40.0ssize1.76.0
sSNAPPY1.6.1ssPATHS1.16.0
ssrch1.18.0ssviz1.36.0
stable1.1.6stabledist0.7-1
stabs0.6-4stageR1.24.0
standR1.6.0StanHeaders2.32.6
staRank1.44.0StarBioTrek1.28.0
stars0.6-4startupmsg0.9.6.1
statebins1.4.0STATegRa1.38.0
Statial1.4.5statip0.2.3
statmod1.5.0statnet.common4.9.0
statTarget1.32.0STdeconvolve1.6.0
stemHypoxia1.38.0stepNorm1.74.0
stJoincount1.4.0stopwords2.3
storr1.2.5strandCheckR1.20.0
strawr0.0.91Streamer1.48.0
strex2.0.0STRINGdb2.14.3
stringdist0.9.12stringfish0.16.0
stringi1.8.3stringr1.5.1
strucchange1.5-3struct1.14.1
Structstrings1.18.0structToolbox1.14.0
StructuralVariantAnnotation1.18.0styler1.10.2
SubCellBarCode1.18.0subSeq1.32.0
SUITOR1.4.0SummarizedBenchmark2.20.0
SummarizedExperiment1.32.0summarytools1.0.1
Summix2.8.0superheat0.1.0
SuperLearner2.0-29supersigs1.10.0
SuppDists1.1-9.7supraHex1.40.0
surfaltr1.8.0survcomp1.52.0
survey4.4-1survivalAnalysis0.3.0
survivalROC1.0.3.1survivalsvm0.0.5
survminer0.4.9survMisc0.5.6
survtype1.18.0sva3.50.0
svaNUMT1.8.0svaRetro1.8.0
svd0.5.5svglite2.1.3
svgPanZoom0.3.4SVMDO1.2.8
svMisc1.2.3svUnit1.0.6
swamp1.5.1SWATH2stats1.32.1
SwathXtend2.24.0swfdr1.28.0
switchBox1.38.0switchde1.28.0
sylly0.1-6sylly.en0.1-3
synapsis1.8.0synapter2.26.0
synergyfinder3.10.3SynExtend1.14.0
synlet2.2.0SynMut1.18.0
syntenet1.4.0sys3.4.2
systemfonts1.0.6systemPipeR2.8.0
systemPipeShiny1.12.0systemPipeTools1.10.0
syuzhet1.0.7tadar1.0.0
TADCompare1.12.1tagcloud0.6
tanggle1.8.0TAPseq1.14.1
target1.16.0TargetDecoy1.8.0
TargetScore1.40.0TargetSearch2.4.2
TBSignatureProfiler1.14.0TBX20BamSubset1.38.0
TCA1.2.1TCC1.42.0
TCGAbiolinks2.30.0TCGAbiolinksGUI.data1.22.0
TCGAutils1.22.2tcltk21.2-11
TCseq1.26.0TDbasedUFE1.2.0
TDbasedUFEadv1.2.0TeachingDemos2.13
TEKRABber1.6.0tensor1.5
tensorA0.36.2.1tensorflow2.15.0
TENxIO1.4.0TENxPBMCData1.20.0
tenXplore1.24.0TEQC4.24.0
ternarynet1.46.0terra1.7-71
terraTCGAdata1.6.0tester0.1.7
testthat3.2.1text2vec0.6.4
textclean0.9.3textshape1.7.3
textshaping0.3.7textstem0.1.4
TFARM1.24.0tfautograph0.3.2
TFBSTools1.40.0TFEA.ChIP1.22.0
TFHAZ1.24.0TFisher0.2.0
TFMPvalue0.0.9tfprobability0.15.1
tfruns1.5.2TFutils1.22.0
TH.data1.1-2threejs0.3.3
tibble3.2.1tictoc1.2
tidybayes3.0.6tidybulk1.14.3
tidydr0.0.5tidygraph1.3.1
tidyHeatmap1.8.1tidyr1.3.1
tidyselect1.2.1tidySingleCellExperiment1.12.0
tidySummarizedExperiment1.12.0tidytext0.4.1
tidytidbits0.3.2tidytree0.4.6
tidyverse2.0.0tiff0.1-12
tigre1.56.0tiledb0.24.0
TileDBArray1.12.0tilingArray1.80.0
timechange0.3.0timecourse1.74.0
timeDate4032.109timeOmics1.14.0
timescape1.26.0timeSeries4032.109
TimiRGeN1.11.0timsac1.3.8-4
TIN1.34.0tinytex0.50
tippy0.1.0TissueEnrich1.22.0
TitanCNA1.40.0tkrplot0.0-27
tkWidgets1.80.0tLOH1.10.0
tm0.7-12TMB1.9.10
TMixClust1.24.0tmvtnorm1.6
TNBC.CMS1.18.0TnT1.24.0
TOAST1.16.0tokenizers0.3.0
tomoda1.12.0tomoseqr1.6.0
TOP1.2.0topconfects1.18.0
topdownr1.24.0topGO2.54.0
topicmodels0.2-16torch0.12.0
ToxicoGx2.6.0TPP3.30.0
TPP2D1.18.0tracktables1.36.0
trackViewer1.38.1tractor.base3.4.2
tradeSeq1.16.0TrajectoryGeometry1.10.1
TrajectoryUtils1.10.1transcriptogramer1.24.0
transcriptR1.30.0transformGamPoi1.8.0
transformr0.1.5transite1.20.1
tRanslatome1.40.0transomics2cytoscape1.12.0
transport0.14-7TransView1.46.0
traseR1.32.0traviz1.8.0
TreeAndLeaf1.14.0treeio1.26.0
treekoR1.10.0treemap2.4-4
TreeSummarizedExperiment2.10.0TREG1.6.0
Trendy1.24.1TRESS1.8.0
tricycle1.10.0triebeard0.4.1
trigger1.48.0trio3.40.0
triplex1.42.0tripr1.8.0
tRNA1.20.1tRNAdbImport1.20.1
tRNAscanImport1.22.0TRONCO2.34.0
truncdist1.0-2truncnorm1.0-9
trust0.1-8TSCAN1.40.1
tseries0.10-55tsne0.1-3.1
TSP1.2-4ttgsea1.10.0
TTMap1.24.0TTR0.24.4
ttservice0.4.0TurboNorm1.50.0
TVTB1.28.0tweeDEseq1.48.0
tweedie2.3.5tweenr2.0.3
twilight1.78.0twoddpcr1.26.0
txcutr1.8.0TxDb.Celegans.UCSC.ce6.ensGene3.2.2
TxDb.Dmelanogaster.UCSC.dm3.ensGene3.2.2TxDb.Dmelanogaster.UCSC.dm6.ensGene3.12.0
TxDb.Hsapiens.UCSC.hg18.knownGene3.2.2TxDb.Hsapiens.UCSC.hg19.knownGene3.2.2
TxDb.Hsapiens.UCSC.hg38.knownGene3.18.0TxDb.Mmusculus.UCSC.mm10.knownGene3.10.0
TxDb.Mmusculus.UCSC.mm9.knownGene3.2.2TxDb.Rnorvegicus.UCSC.rn4.ensGene3.2.2
tximeta1.20.3tximport1.30.0
tximportData1.30.0TypeInfo1.68.0
tzdb0.4.0UCell2.6.2
ucminf1.2.1Ularcirc1.20.0
umap0.2.10.0UMI4Cats1.12.0
uncoverappLib1.12.0UNDO1.44.0
unifiedWMWqPCR1.38.0UniProt.ws2.42.0
uniqtag1.0.1Uniquorn2.22.0
units0.8-5universalmotif1.20.0
unmarked1.4.1updateObject1.6.0
UpSetR1.4.0urca1.3-3
urlchecker1.0.1urltools1.7.3
usethis2.2.3uSORT1.28.0
utf81.2.4uuid1.2-0
uwot0.1.16V84.4.2
VAExprs1.8.0valr0.7.0
VAM1.1.0VanillaICE1.64.1
VarCon1.10.0VarfromPDB2.2.10
varhandle2.0.6variancePartition1.32.5
VariantAnnotation1.48.1VariantExperiment1.16.0
VariantFiltering1.38.0VariantTools1.44.0
varSelRF0.7-8VaSP1.14.0
vbmp1.70.0vcd1.4-12
VCFArray1.18.0vcfR1.15.0
vctrs0.6.5VDJdive1.4.0
VegaMC3.40.0vegan2.6-4
velociraptor1.12.0veloviz1.8.0
venn1.12VennDetail1.18.0
VennDiagram1.7.3verification1.42
VERSO1.12.0VGAM1.1-10
vidger1.22.0VIM6.2.2
vioplot0.4.0viper1.36.0
vipor0.4.7viridis0.6.5
viridisLite0.4.2visdat0.6.0
ViSEAGO1.16.0visNetwork2.1.2
vissE1.10.0Voyager1.4.0
VplotR1.12.1vroom1.6.5
vsclust1.4.0vsn3.70.0
vtpnet0.42.0vulcan1.24.0
waddR1.16.0waffle1.0.2
waiter0.2.5waldo0.5.2
warp0.2.1wateRmelon2.8.0
wavClusteR2.36.0waveslim1.8.4
wavethresh4.7.2wdm0.2.4
weaver1.68.0webbioc1.74.0
webchem1.3.0webshot0.5.5
webutils1.2.0weitrix1.14.0
wesanderson0.3.7WGCNA1.72-5
wheatmap0.2.0whisker0.4.1
widgetTools1.80.0wiggleplotr1.26.0
withr3.0.0wk0.9.1
word2vec0.4.0wordcloud2.6
wordcloud20.2.1wpm1.12.0
wppi1.10.0Wrench1.20.0
writexl1.5.0WriteXLS6.5.0
wrswoR1.1.1xcms4.0.2
xcore1.6.0XDE2.48.0
Xeva1.18.0xfun0.42
xgboost1.7.7.1XINA1.20.0
xmapbridge1.60.0XML3.99-0.16.1
xml21.3.6XML2R0.0.6
xmlparsedata1.0.5XNAString1.10.0
xopen1.0.0xtable1.8-4
XtraSNPlocs.Hsapiens.dbSNP144.GRCh370.99.12xts0.13.2
XVector0.42.0yaImpute1.0-34
yaml2.3.8yamss1.28.0
YAPSA1.28.0yardstick1.3.0
yarn1.28.0yeastCC1.42.0
yeastExpData0.48.0yesno0.1.2
yulab.utils0.1.4zCompositions1.5.0-3
zeallot0.1.0zellkonverter1.12.1
zenith1.4.2zFPKM1.24.0
zinbwave1.24.0zip2.3.1
zlibbioc1.48.2zoo1.8-12
ZygosityPredictor1.2.0

Python version: 3.10.12

Python packages

packageversionpackageversion
absl-py2.1.0alembic1.13.2
altair5.4.1aniso86019.0.1
annotated-types0.7.0anyio4.4.0
argon2-cffi23.1.0argon2-cffi-bindings21.2.0
arrow1.3.0arviz0.19.0
asgiref3.8.1asttokens2.4.1
astunparse1.6.3async-generator1.10
async-lru2.0.4attrs24.2.0
automat24.8.1babel2.16.0
bayesian-optimization1.5.1bcrypt4.2.0
beautifulsoup44.12.3black24.8.0
bleach6.1.0blinker1.8.2
blis0.7.11bokeh3.5.2
boruta0.4.3bottleneck1.4.0
branca0.7.2cachetools5.5.0
catalogue2.0.10catboost1.2.7
certifi2024.8.30certipy0.2.0
cffi1.17.1charset-normalizer3.3.2
click8.1.7cloudpathlib0.19.0
cloudpickle3.0.0cmake3.30.3
cmdstanpy1.2.4colorama0.4.6
colorlog6.8.2colorlover0.3.0
comm0.2.2confection0.1.5
constantly23.10.4contourpy1.3.0
coverage7.6.1cryptography43.0.1
cssselect1.2.0cufflinks0.17.3
cycler0.12.1cymem2.0.8
cython3.0.11dash2.18.1
dash-core-components2.0.0dash-html-components2.0.0
dash-table5.0.0dask2024.8.2
databricks-sdk0.32.1datascience0.17.6
deap1.4.1debugpy1.8.5
decorator5.1.1defusedxml0.7.1
deprecated1.2.14dill0.3.8
django5.1.1dm-tree0.1.8
docker7.1.0eli50.13.0
exceptiongroup1.2.2executing2.1.0
facets1.1.0fairlearn0.10.0
fastapi0.114.1fastjsonschema2.20.0
fastprogress1.0.3filelock3.16.0
flake87.1.1flask3.0.3
flatbuffers24.3.25folium0.17.0
fonttools4.53.1fqdn1.5.1
fsspec2024.9.0funcy2.0
future1.0.0gast0.6.0
gensim4.3.2geopandas1.0.1
gitdb4.0.11gitpython3.1.43
google-auth2.34.0google-pasta0.2.0
graphene3.3graphql-core3.2.4
graphql-relay3.2.0graphviz0.8.4
greenlet3.1.0grpcio1.66.1
gunicorn23.0.0h110.14.0
h5netcdf1.3.0h5py3.11.0
hdbscan0.8.38.post1holidays0.56
html5lib1.1htmlmin0.1.12
httpcore1.0.5httpx0.27.2
huggingface-hub0.24.7hyperlink21.0.0
hyperopt0.2.7idna3.8
imagehash4.3.1imageio2.35.1
imbalanced-learn0.12.3imblearn0.0
importlib-metadata8.5.0importlib-resources6.4.5
incremental24.7.2iniconfig2.0.0
ipaddress1.0.23ipykernel6.29.5
ipython8.27.0ipywidgets8.1.5
isoduration20.11.0isort5.13.2
itemadapter0.9.0itemloaders1.3.1
itsdangerous2.2.0jedi0.19.1
jinja23.1.4jmespath1.0.1
joblib1.4.2json50.9.25
jsonpointer3.0.0jsonschema4.23.0
jsonschema-specifications2023.12.1jupyter1.1.1
jupyter-client8.6.2jupyter-console6.6.3
jupyter-core5.7.2jupyter-events0.10.0
jupyter-lsp2.2.5jupyter-server2.14.2
jupyter-server-terminals0.5.3jupyter-telemetry0.1.0
jupyterhub3.1.1jupyterhub-nativeauthenticator1.2.0
jupyterlab4.2.5jupyterlab-pygments0.3.0
jupyterlab-server2.27.3jupyterlab-widgets3.0.13
keras3.5.0keras-tuner1.4.7
kiwisolver1.4.7kmodes0.12.2
kt-legacy1.0.5langcodes3.4.0
language-data1.2.0lazy-loader0.4
libclang18.1.1lightgbm4.5.0
lime0.2.0.1lit18.1.8
llvmlite0.43.0locket1.0.0
lucid0.3.8lxml5.3.0
mako1.3.5marisa-trie1.2.0
markdown3.7markdown-it-py3.0.0
markupsafe2.1.5matplotlib3.9.2
matplotlib-inline0.1.7matplotlib-venn1.1.1
mccabe0.7.0mdurl0.1.2
missingno0.5.2mistune3.0.2
ml-dtypes0.4.0mlflow2.16.0
mlflow-skinny2.16.0mlpack4.4.0.post1
mlxtend0.23.1more-itertools10.5.0
mpld30.5.10mpmath1.3.0
multimethod1.4murmurhash1.0.10
mxnet1.9.1mypy-extensions1.0.0
namex0.0.8narwhals1.8.0
nbclient0.10.0nbconvert7.16.4
nbformat5.10.4nest-asyncio1.6.0
networkx3.3nibabel5.2.1
nilearn0.10.4nltk3.9.1
notebook7.2.2notebook-shim0.2.4
numba0.60.0numexpr2.10.1
numpy1.26.4nvidia-cublas-cu1111.10.3.66
nvidia-cuda-cupti-cu1111.7.101nvidia-cuda-nvrtc-cu1111.7.99
nvidia-cuda-runtime-cu1111.7.99nvidia-cudnn-cu118.5.0.96
nvidia-cufft-cu1110.9.0.58nvidia-curand-cu1110.2.10.91
nvidia-cusolver-cu1111.4.0.1nvidia-cusparse-cu1111.7.4.91
nvidia-nccl-cu112.14.3nvidia-nccl-cu122.23.4
nvidia-nvtx-cu1111.7.91oauthlib3.2.2
onetimepass1.0.1opencv-python4.10.0.84
opentelemetry-api1.16.0opentelemetry-sdk1.16.0
opentelemetry-semantic-conventions0.37b0opt-einsum3.3.0
optree0.12.1optuna4.0.0
overrides7.7.0packaging24.1
pamela1.2.0pandas2.2.2
pandas-profiling3.0.0pandocfilters1.5.1
parsel1.9.1parso0.8.4
partd1.4.2pathspec0.12.1
patsy0.5.6pexpect4.9.0
phik0.12.4pillow10.4.0
platformdirs4.3.2plotly5.24.1
pluggy1.5.0preshed3.0.9
prometheus-client0.20.0prompt-toolkit3.0.47
prophet1.1.5protego0.3.1
protobuf4.25.4psutil6.0.0
ptyprocess0.7.0pure-eval0.2.3
py4j0.10.9.7pyarrow17.0.0
pyasn10.6.1pyasn1-modules0.4.1
pycaret2.2.2pycodestyle2.12.1
pycparser2.22pydantic2.9.1
pydantic-core2.23.3pydeck0.9.1
pydispatcher2.0.7pydot3.0.1
pyflakes3.2.0pygments2.18.0
pyldavis3.4.1pymc33.11.4
pynndescent0.5.13pyod2.0.2
pyogrio0.9.0pyopengl3.1.7
pyopenssl24.2.1pyparsing3.1.4
pyproj3.6.1pytest8.3.3
pytest-cov5.0.0python-dateutil2.9.0.post0
python-json-logger2.0.7pytz2024.2
pywavelets1.7.0pyyaml6.0.2
pyzmq26.2.0queuelib1.7.0
referencing0.35.1regex2024.9.11
requests2.32.3requests-file2.1.0
retrying1.3.4rfc3339-validator0.1.4
rfc3986-validator0.1.1rich13.8.1
rpds-py0.20.0rsa4.9
ruamel-yaml0.18.6ruamel-yaml-clib0.2.8
safetensors0.4.5scikit-base0.9.0
scikit-image0.24.0scikit-learn1.5.2
scikit-plot0.3.7scipy1.14.1
scrapy2.11.2seaborn0.13.2
semver3.0.2send2trash1.8.3
service-identity24.1.0setuptools74.1.2
shap0.46.0shapely2.0.6
shellingham1.5.4six1.16.0
sktime0.33.0slicer0.0.8
smart-open7.0.4smmap5.0.1
sniffio1.3.1soupsieve2.6
spacy3.8.0spacy-legacy3.0.12
spacy-loggers1.0.5sqlalchemy2.0.34
sqlparse0.5.1srsly2.4.8
stack-data0.6.3stanio0.5.1
starlette0.38.5statsmodels0.14.2
stopit1.1.2streamlit1.38.0
sympy1.13.2tabulate0.9.0
tangled-up-in-unicode0.1.0tenacity8.5.0
tensorboard2.17.1tensorboard-data-server0.7.2
tensorflow2.17.0tensorflow-io-gcs-filesystem0.37.1
tensorflow-probability0.24.0termcolor2.4.0
terminado0.18.1textblob0.18.0.post0
theano-pymc1.1.2thinc8.2.5
threadpoolctl3.5.0tifffile2024.8.30
tinycss21.3.0tldextract5.1.2
tokenizers0.19.1toml0.10.2
tomli2.0.1toolz0.12.1
torch2.0.1tornado6.4.1
tpot0.12.2tqdm4.66.5
traitlets5.14.3transformers4.44.2
triton2.0.0twisted24.7.0
typer0.12.5types-python-dateutil2.9.0.20240906
typing-extensions4.12.2tzdata2024.1
umap-learn0.5.6update-checker0.18.0
uri-template1.3.0urllib32.2.3
vega2.6.0visions0.7.1
w3lib2.2.1wasabi1.1.3
watchdog4.0.2wcwidth0.2.13
weasel0.4.1webcolors24.8.0
webencodings0.5.1websocket-client1.8.0
werkzeug3.0.4wheel0.44.0
widgetsnbextension4.0.13wordcloud1.9.3
wrapt1.16.0xarray2024.9.0
xarray-einstats0.7.0xgboost2.1.1
xyzservices2024.9.0yellowbrick1.5
zipp3.20.2zope-interface7.0.3

Where to find the AMI?

Our JupyterHub Server AMI products can be found at AWS Marketplace.

Pricing

$0.10/hour charge for the AMI plus the cost charged for computing resources by AWS.

Set up JupyterHub Server on EC2

Default user: jhub-admin

Please sign up and set your password for jhub-admin when you start the server for the first time. Different from regular users, jhub-admin is automatically authorized to log in after the password is created.

http is supported out of box.

If https is desired, please send your request to support@elmcomputing.io

Startup page

After the EC2 instance is started, you can access the JupyterHub Server with its public IP address. For example, if the IP address is 10.11.12.13, typing http://10.11.12.13 in the browser will bring you to the following startup page:

main page

Sign-up page

When the JupyterHub Server is activated, a default user "jhub-admin" is created. The first time you access the server, a password need to be set for "jhub-admin".

main page

jupyterlab

main page

Authorize page

When creating new users, an authorization step is needed at "http://10.11.12.13/hub/authorize"

main page

Change password

The password can be changed at "http://10.11.12.13/hub/change-password"

main page

Release Notes

Added Python 3.9, 3.10, and 3.11; For each Python version, the data science packages such as tensorflow, torch, datascience, mlpack, mlflow and xgboost are installed.

SageMath: 9.0

GPU Support

NVIDIA DriverCUDA
520.61.0511.8.0

Python version: 3.8.10

Python packages

packageversionpackageversion
absl-py1.4.0access1.1.8
adal1.2.7aenum3.1.12
affine2.4.0aiobotocore2.5.0
aioconsole0.6.1aiofiles22.1.0
aiohttp3.8.1aioitertools0.11.0
aiosignal1.3.1aiosqlite0.17.0
alabaster0.7.13alembic1.10.2
altair4.2.0amqp5.1.1
analytics-python1.4.post1aniso86019.0.1
ansible2.9.6ansible-core2.13.8
antlr4-python3-runtime4.12.0anyio3.6.2
apache-airflow2.5.3apache-airflow-providers-common-sql1.3.4
apache-airflow-providers-ftp3.3.1apache-airflow-providers-http4.2.0
apache-airflow-providers-imap3.1.1apache-airflow-providers-sqlite3.3.1
apache-libcloud2.8.0apispec3.3.2
appdirs1.4.4applicationinsights0.11.10
argcomplete3.0.5argon2-cffi21.3.0
argon2-cffi-bindings21.2.0args0.1.0
arrow1.2.3asgiref3.6.0
asn1crypto1.5.1astor0.8.1
astroid2.15.2asttokens2.2.1
astunparse1.6.3async-generator1.10
async-timeout4.0.2asynctest0.13.0
atomicwrites1.4.1attrs22.2.0
audioread3.0.0Authlib1.2.0
autobahn23.1.2autograd1.5
Automat22.10.0avro1.11.1
avro-python31.10.2aws-requests-auth0.4.3
azure-core1.26.3Babel2.12.1
backcall0.2.0backoff1.10.0
backports.tempfile1.0backports.weakref1.0.post1
backports.zoneinfo0.2.1base64io1.0.3
bcrypt4.0.1beautifulsoup44.12.0
billiard4.1.0black23.3.0
bleach6.0.0blinker1.4
blis0.7.9bokeh2.4.3
boltons23.0.0boto2.49.0
boto31.26.76botocore1.29.76
Bottleneck1.3.7bqplot0.12.37
branca0.6.0Brotli1.0.9
brotlipy0.7.0bs40.0.1
build0.10.0bytecode0.14.0
CacheControl0.12.11cached-property1.5.2
cachelib0.9.0cachetools5.3.0
cachy0.3.0catalogue2.0.8
cattrs22.2.0certifi2022.12.7
certipy0.1.3cffi1.15.1
cfgv3.3.1chainer7.8.1
chardet5.1.0charset-normalizer2.1.1
cleo2.0.1click8.1.3
click-didyoumean0.3.0click-plugins1.1.1
click-repl0.2.0clickclick20.10.2
cligj0.7.2clikit0.5.1
clint0.5.1cloud-init23.1.1
cloudpickle2.2.1cmake3.25.0
colorama0.4.6coloredlogs15.0.1
colorlog4.8.0colour0.1.5
comm0.1.3commonmark0.9.1
confection0.0.4configobj5.0.6
configparser5.3.0ConfigUpdater3.1.1
confluent-kafka2.0.2connexion2.14.2
constantly15.1.0constructs10.1.300
contextily1.3.0contextlib221.6.0
contourpy1.0.7convertdate2.4.0
countryinfo0.1.2coverage6.5.0
coveralls3.3.1cramjam2.6.2
crashtest0.4.1crcmod1.7
cron-descriptor1.2.35croniter1.3.8
cryptography40.0.1css-html-js-minify2.5.5
cssselect1.2.0cssutils2.6.0
cupy-cuda11112.0.0curlify2.2.1
cx-Oracle8.3.0cycler0.11.0
cymem2.0.7Cython0.29.34
dash2.9.2dash-core-components2.0.0
dash-html-components2.0.0dash-renderer1.9.1
dash-table5.0.0dask2023.3.2
databricks-cli0.17.6dataclasses0.6
dataclasses-json0.5.7datadog0.45.0
dataprep0.4.4datascience0.17.6
datasets2.11.0dateparser1.1.8
DateTime5.1db-dtypes1.1.1
dbus-python1.2.16ddsketch2.0.4
ddtrace1.11.0debugpy1.6.6
decorator4.4.2deepdiff6.3.0
defusedxml0.7.1delta-spark2.2.0
Deprecated1.2.13deprecation2.1.0
descartes1.1.0dill0.3.6
dipy1.6.0distlib0.3.6
distributed2023.3.2distro1.4.0
distro-info=0.23ubuntu1Django4.2
djangorestframework3.14.0dmri-amico1.5.4
dmri-commit1.6.4dnspython1.16.0
docker6.0.1docopt0.6.2
docutils0.19dulwich0.21.3
dynamo-json1.2.0earthengine-api0.1.347
EasyProcess1.1ebaysdk2.2.0
ec2-hibinit-agent1.0.0ecdsa0.18.0
ee-extra0.0.15eemeter3.1.1
eerepr0.0.4eli50.13.0
email-validator1.3.1emoji2.2.0
entrypoint21.1entrypoints0.3
enum341.1.10envier0.4.0
esda2.4.3et-xmlfile1.1.0
etils1.1.1exceptiongroup1.1.1
exchange-calendars4.2.5execnet1.9.0
executing1.2.0facebook-business16.0.2
facebook-sdk3.1.0facebook-wda1.4.6
Faker18.3.2fastapi0.95.0
fastavro1.7.3fasteners0.18
fastjsonschema2.16.3fastnumbers5.0.1
fastparquet2023.2.0fastrlock0.8.1
fasttext0.9.2ffmpeg-python0.2.0
ffmpy0.3.0filelock3.10.7
Fiona1.8.22fire0.5.0
flake86.0.0Flask2.2.3
Flask-AppBuilder4.1.4Flask-Babel2.0.0
Flask-CacheBuster1.0.0Flask-Caching2.0.2
Flask-Compress1.13Flask-Cors3.0.10
Flask-JWT-Extended4.4.4Flask-Limiter3.3.0
Flask-Login0.6.2Flask-Session0.4.0
Flask-SQLAlchemy2.5.1Flask-WTF1.1.1
flatbuffers23.3.3folium0.13.0
fonttools4.39.3fqdn1.5.1
freezegun1.2.2frozendict2.3.6
frozenlist1.3.3fsspec2023.3.0
funcsigs1.0.2future0.18.3
fuzzywuzzy0.18.0gast0.4.0
gcsfs2023.3.0GDAL3.0.4
gdown4.7.1gdspy1.6.12
geeadd0.5.6geemap0.20.4
gensim4.3.1geocoder1.38.1
geographiclib2.0geoip24.6.0
geojson3.0.1geopandas0.12.2
geopy2.3.0geotext0.4.0
gevent22.10.2giddy2.3.4
gitapi1.0.1gitdb4.0.10
GitPython3.1.31goflow0.1.2
google-api-core2.11.0google-api-python-client2.83.0
google-auth2.17.1google-auth-httplib20.1.0
google-auth-oauthlib1.0.0google-cloud-bigquery3.9.0
google-cloud-bigquery-storage2.19.1google-cloud-core2.3.2
google-cloud-storage2.8.0google-crc32c1.5.0
google-pasta0.2.0google-resumable-media2.4.1
googleapis-common-protos1.59.0googlemaps4.10.0
gradio3.24.1gradio_client0.0.5
graphviz0.20.1great-expectations0.16.5
greenlet2.0.2gremlinpython3.6.2
grpc-google-iam-v10.12.6grpcio1.53.0
grpcio-status1.53.0grpcio-tools1.53.0
gspread5.7.2gunicorn20.1.0
h110.14.0h24.1.0
h33.7.6h5netcdf1.1.0
h5py3.8.0haversine2.8.0
hdfs2.7.0hdfs30.3.1
HeapDict1.0.1hgapi1.7.4
hibagent1.0.1hijri-converter2.2.4
holidays0.22hpack4.0.0
html5lib1.1htmlmin0.1.12
httpcore0.16.3httplib20.22.0
httplib2shim0.0.3httptools0.5.0
httpx0.23.3huggingface-hub0.13.3
humanfriendly10.0humanize4.6.0
hvac1.1.0hyperframe6.0.1
hyperlink21.0.0ibm-cloud-sdk-core3.16.5
ibm-watson7.0.0identify2.5.22
idna2.8ijson3.2.0.post0
ImageHash4.3.1imageio2.27.0
imageio-ffmpeg0.4.8imagesize1.4.1
importlib-metadata4.13.0importlib-resources5.12.0
incremental22.10.0inequality1.0.0
inflection0.5.1iniconfig2.0.0
installer0.7.0invoke2.0.0
ipaddress1.0.23ipyevents2.0.1
ipyfilechooser0.6.0ipykernel6.22.0
ipyleaflet0.17.2ipysheet0.7.0
ipython8.12.0ipython-genutils0.2.0
ipytree0.2.2ipywidgets7.7.5
iso86011.1.0isodate0.6.1
isoduration20.11.0isort5.12.0
itemadapter0.8.0itemloaders1.0.6
itsdangerous2.1.2jarowinkler1.2.3
jax0.4.8jdcal1.4.1
jedi0.18.2jeepney0.8.0
Jinja23.0.3jira3.5.0
jmespath1.0.1joblib1.2.0
JPype11.4.1jschema-to-python1.2.3
jsii1.79.0json50.9.11
jsondiff2.0.0jsonlines1.2.0
jsonpatch1.22jsonpath-ng1.5.3
jsonpickle3.0.1jsonpointer2.0
jsonschema4.17.3junit-xml1.9
jupyter1.0.0jupyter-console6.6.3
jupyter-events0.6.3jupyter-server-proxy3.2.2
jupyter-telemetry0.1.0jupyter-ydoc0.2.3
jupyter_client8.1.0jupyter_core5.3.0
jupyter_server2.5.0jupyter_server_fileid0.8.0
jupyter_server_terminals0.4.4jupyter_server_ydoc0.8.0
jupyterhub3.1.1jupyterhub-idle-culler1.2.1
jupyterhub-nativeauthenticator1.1.0jupyterlab3.6.3
jupyterlab-pygments0.2.2jupyterlab-widgets1.1.4
jupyterlab_server2.22.0jwcrypto1.4.2
jwt1.3.1kafka-python2.0.2
keplergl0.3.2keras2.12.0
Keras-Applications1.0.8Keras-Preprocessing1.1.2
keycloakauthenticator3.3.0keyring18.0.1
kiwisolver1.4.4knack0.10.1
kombu5.2.4korean-lunar-calendar0.3.1
langcodes3.3.0laspy2.4.1
launchpadlib1.10.13lazr.restfulclient0.14.2
lazr.uri1.0.3lazy-object-proxy1.9.0
lazy_loader0.2leafmap0.18.8
Levenshtein0.20.9libclang16.0.0
libcst0.4.9libpysal4.7.0
librosa0.10.0.post2lightgbm3.3.5
limits3.3.1linkify-it-py2.0.0
lit15.0.7llvmlite0.39.1
locket1.0.0lockfile0.12.2
logzero1.7.0lorem0.1.1
lxml4.9.2M2Crypto0.38.0
makefun1.15.1Mako1.2.4
mamba0.11.2mapclassify2.5.0
Markdown3.4.3markdown-it-py2.2.0
markdown22.4.8MarkupSafe2.1.2
marshmallow3.19.0marshmallow-enum1.5.1
marshmallow-oneofschema3.0.1marshmallow-sqlalchemy0.26.1
matplotlib3.6.3matplotlib-inline0.1.6
maxminddb2.2.0mccabe0.7.0
mdit-py-plugins0.3.3mdurl0.1.2
mechanize0.4.8meep1.0.6
mercantile1.2.1Metaphone0.6
mgwr2.1.2missingno0.5.2
mistune2.0.5ml-dtypes0.0.4
mlflow2.2.2mlpack4.0.1
mock5.0.1momepy0.5.4
monotonic1.6more-itertools4.2.0
moto4.1.6moviepy1.0.3
mpi4py3.1.4mpmath1.3.0
msal1.21.0msal-extensions1.0.0
msgpack1.0.5msrest0.7.1
msrestazure0.6.4mss7.0.1
multidict6.0.4multimethod1.9.1
multiprocess0.70.14multitasking0.0.11
munch2.5.0murmurhash1.0.9
mutagen1.46.0mypy1.1.1
mypy-extensions1.0.0mysql-connector-python8.0.29
mysqlclient2.1.1nbclassic0.5.4
nbclient0.7.3nbconvert7.3.0
nbformat5.8.0nbgitpuller1.1.1
nbsphinx0.9.1ndg-httpsclient0.5.1
nest-asyncio1.5.6netaddr0.7.19
netifaces0.10.4networkx3.0
nibabel5.1.0nlopt2.7.1
nltk3.8.1nodeenv1.7.0
nose1.3.7notebook6.5.3
notebook_shim0.2.2ntlm-auth1.1.0
numba0.56.4numpy1.23.5
nvidia-cublas-cu1111.11.3.6nvidia-cuda-runtime-cu1111.8.89
nvidia-cudnn-cu118.6.0.163nvidia-tensorrt8.4.1.5
nycflights130.0.3oauth2client4.1.3
oauthenticator15.0.0oauthlib3.1.0
ogr0.40.0olefile0.46
onetimepass1.0.1onnxruntime1.14.1
opencensus0.11.2opencensus-context0.1.3
opencv-contrib-python4.7.0.72opencv-python4.7.0.72
openflow0.1.2.4openpyxl3.1.2
opensearch-py2.2.0opentelemetry-api1.16.0
opt-einsum3.3.0ordered-set4.1.0
orjson3.8.9oscrypto1.3.0
osmnx1.2.2outcome1.2.0
overrides7.3.1packaging23.0
pamela1.0.0pandas1.5.3
pandas-gbq0.19.1pandas-market-calendars4.1.4
pandas-profiling3.6.6pandas-usaddress0.21
pandasql0.7.3pandocfilters1.5.0
paramiko3.1.0parsedatetime2.6
parsel1.7.0parso0.8.3
partd1.3.0pastel0.2.1
pathlib22.3.7.post1pathos0.3.0
pathspec0.9.0pathy0.10.1
patsy0.5.3pbr5.11.1
pdfkit1.0.0pendulum2.1.2
pep5170.13.0pexpect4.6.0
pg80001.29.4phik0.12.3
phonenumbers8.13.8pickleshare0.7.5
pika1.3.1Pillow9.5.0
pip-tools6.12.3pipenv2023.3.20
pkginfo1.9.6pkgutil_resolve_name1.3.10
platformdirs3.2.0plotly5.14.0
pluggy1.0.0ply3.11
Pmw2.1.1poetry-core1.5.2
pointpats2.3.0pooch1.6.0
portalocker2.7.0postal-address22.4.22.1
pox0.3.2ppft1.7.6.6
pprintpp0.4.0pre-commit3.2.2
premailer3.10.0preshed3.0.8
prettytable3.6.0priority2.0.0
prison0.2.1probableparsing0.0.1
proglog0.1.10progressbar24.2.0
prometheus-client0.16.0prometheus-flask-exporter0.22.3
promise2.3prompt-toolkit3.0.38
Protego0.2.1proto-plus1.22.2
protobuf4.22.1protobuf3-to-dict0.1.5
psutil5.9.4psycopg22.9.6
psycopg2-binary2.9.6ptyprocess0.7.0
publication0.0.3PuLP2.7.0
pure-eval0.2.2py1.11.0
py4j0.10.9.5pyarrow11.0.0
pyasn10.4.8pyasn1-modules0.2.8
pyathena2.23.0pybind112.10.4
pycairo1.23.0pycodestyle2.10.0
pycosat0.6.3pycountry22.3.5
pycountry-convert0.7.2pycparser2.21
pycron3.0.0PyCRS1.0.2
pycrypto2.6.1pycryptodome3.17
pycryptodomex3.17pycurl7.45.2
pydantic1.10.7pydata-google-auth1.7.0
pydeequ1.0.1PyDispatcher2.0.7
pydot1.4.2pydotplus2.0.2
pydub0.25.1pyexpect1.0.22
pyflakes3.0.1pygame2.3.0
pygeos0.14PyGithub1.58.1
pyglet2.0.5Pygments2.14.0
PyGObject3.36.0PyGreSQL5.2.4
pyhcl0.4.4PyJWT2.6.0
pykerberos1.1.14pylev1.4.0
pylint2.17.2pyluach2.2.0
PyMeeus0.5.12pymongo4.3.3
pymssql2.2.7PyMySQL1.0.3
PyNaCl1.5.0pyodbc4.0.35
pyOpenSSL23.1.1pypandoc1.11
pyparsing3.0.9PyPDF41.27.0
pyperclip1.8.2pypika-tortoise0.1.6
pypopulation2020.3pyproj3.5.0
pyproject_api1.5.1pyproject_hooks1.0.0
pyquery2.0.0pyrsistent0.15.5
pysal23.1pyscreenshot3.1
pyserial3.4pysftp0.2.9
pyshp2.3.1pysndfile1.4.4
PySocks1.7.1pyspark3.3.2
pystac1.7.1pystac-client0.6.1
pytest7.2.2pytest-cov4.0.0
pytest-forked1.6.0pytest-mock3.10.0
pytest-runner6.0.0pytest-xdist3.2.1
python-apt2.0.1+ubuntu0.20.4.1python-box7.0.1
python-crfsuite0.9.8python-daemon3.0.1
python-dateutil2.8.2python-debian=0.1.36ubuntu1
python-distutils-extra2.39python-docx0.8.11
python-dotenv1.0.0python-editor1.0.4
python-gitlab3.13.0python-gnupg0.5.0
python-http-client3.3.7python-jose3.3.0
python-json-logger2.0.7python-jwt4.0.0
python-keycloak2.14.0python-Levenshtein0.20.9
python-magic0.4.27python-multipart0.0.6
python-nvd30.15.0python-slugify8.0.1
python-stdnum1.18python-twitter3.5
python-utils3.5.2pytimeparse1.1.8
pytz2022.7.1pytz-deprecation-shim0.1.0.post0
pytzdata2020.1PyWavelets1.4.1
pywinrm0.3.0PyX0.16
PyYAML5.3.1pyzmq25.0.2
qtconsole5.4.2QtPy2.3.1
quantecon0.6.0querystring-parser1.2.4
queuelib1.6.2quilt35.2.0
rapidfuzz2.15.0rasterio1.3.6
rasterstats0.18.0ratelim0.1.6
ratelimit2.2.1readme-renderer37.3
redis4.5.4redshift-connector2.0.910
regex2021.11.10reportlab3.6.12
reportlib3.4.0repoze.lru0.7
requests2.28.2requests-aws4auth1.2.2
requests-file1.5.1requests-futures1.0.0
requests-kerberos0.12.0requests-ntlm1.1.0
requests-oauthlib1.3.1requests-toolbelt0.10.1
requests-unixsocket0.2.0resampy0.4.2
resolvelib0.8.1responses0.18.0
retry0.9.2retrying1.3.4
reverse-geocoder1.5.1rfc3339-validator0.1.4
rfc39861.5.0rfc3986-validator0.1.1
rich13.3.3roman4.0
rsa4.9Rtree1.0.1
ruamel.yaml0.17.17ruamel.yaml.clib0.2.7
rvlib0.0.6s3fs0.6.0
s3transfer0.6.0sacremoses0.0.53
sankee0.2.3sarif-om1.0.4
sasl0.3.1scandir1.10.0
schema0.7.5scikit-image0.20.0
scikit-learn1.2.2scipy1.9.1
scooby0.7.1scp0.14.5
scramp1.4.4scrape0.11.3
Scrapy2.8.0seaborn0.12.2
SecretStorage2.3.1segregation2.3.1
selenium4.8.3selinux3.0
semantic-version2.10.0semver3.0.0
Send2Trash1.8.0sendgrid6.10.0
sentencepiece0.1.97sentry-sdk1.18.0
service-identity21.1.0setproctitle1.3.2
setuptools-scm7.1.0sh2.0.3
shap0.41.0Shapely1.8.5.post1
shellingham1.5.0.post1shortuuid1.0.11
simpervisor0.4simple-salesforce1.12.3
simplejson3.16.0singledispatch4.0.0
six1.14.0sklearn-pandas2.2.0
slack-sdk3.20.2slackclient2.9.4
slicer0.0.7smart-open6.3.0
smdebug-rulesconfig1.0.1smmap5.0.0
sniffio1.3.0snowballstemmer2.2.0
snowflake-connector-python3.0.2snowflake-sqlalchemy1.4.7
snuggs1.4.7sortedcontainers2.4.0
sos4.4soundfile0.12.1
soupsieve2.4soxr0.3.4
spacy3.5.1spacy-legacy3.0.12
spacy-loggers1.0.4spaghetti1.7.2
spams2.6.5.4spglm1.0.8
Sphinx6.1.3sphinxcontrib-applehelp1.0.4
sphinxcontrib-devhelp1.0.2sphinxcontrib-htmlhelp2.0.1
sphinxcontrib-jsmath1.0.1sphinxcontrib-qthelp1.0.3
sphinxcontrib-serializinghtml1.1.5spint1.0.7
splot1.1.5.post1spopt0.5.0
spreg1.3.1spvcm0.3.0
SQLAlchemy1.4.41SQLAlchemy-JSONField1.0.1.post0
SQLAlchemy-Utils0.40.0sqlalchemy2-stubs0.0.2a32
sqlmodel0.0.8sqlparse0.4.3
srsly2.4.6ssh-import-id5.10
sshtunnel0.4.0stack-data0.6.2
starkbank-ecdsa2.2.0starlette0.26.1
statsd4.0.1statsmodels0.13.5
stevedore5.0.0stringcase1.2.0
structlog22.3.0swagger-ui-bundle0.0.9
sympy1.11.1systemd-python234
tabulate0.9.0tangled-up-in-unicode0.2.0
tblib1.7.0tenacity8.2.2
tensorboard2.12.1tensorboard-data-server0.7.0
tensorboard-plugin-wit1.8.1tensorboardX2.5
tensorflow2.12.0tensorflow-estimator2.12.0
tensorflow-io-gcs-filesystem0.32.0termcolor2.2.0
terminado0.17.1testpath0.6.0
testresources2.0.1text-unidecode1.3
tf-estimator-nightly2.13.0.dev2023040308Theano1.0.5
thinc8.1.9threadpoolctl3.1.0
thrift0.16.0tifffile2023.3.21
timer0.2.2timezonefinder6.2.0
tinycss21.2.1tldextract3.4.0
tobler0.9.0tokenizers0.13.2
toml0.10.2tomli2.0.1
tomlkit0.11.7toolz0.12.0
torch2.0.0+cu118torchaudio2.0.1+cu118
torchvision0.15.1+cu118tornado6.2
tortoise-orm0.19.3tox4.4.8
tqdm4.64.1traitlets5.9.0
traittypes0.2.1transformers4.27.4
trio0.22.0trio-websocket0.10.2
triton2.0.0trove-classifiers2023.3.9
Twisted22.10.0txaio23.1.1
typed-ast1.5.4typeguard2.13.3
typer0.7.0types-PyYAML6.0.12.9
types-requests2.28.11.17types-urllib31.26.25.10
typing3.7.4.3typing-inspect0.8.0
typing_extensions4.5.0tzdata2023.3
tzlocal4.3ua-parser0.16.1
uamqp1.6.4ubuntu-advantage-tools8001
uc-micro-py1.0.1ujson5.7.0
unattended-upgrades0.1unicodecsv0.14.1
Unidecode1.3.6uri-template1.2.0
uritemplate4.1.1urllib31.26.15
usaddress0.5.10uvicorn0.21.1
uvloop0.17.0varname0.8.2
vega-datasets0.9.0vine5.0.0
virtualenv20.21.0virtualenv-clone0.5.7
visions0.7.5vpython7.6.4
w3lib2.1.1wadllib1.3.3
wasabi1.1.1watchdog3.0.0
watchtower3.0.1watergrid1.1.1
wcwidth0.2.6webcolors1.13
webencodings0.5.1websocket-client1.1.0
websockets11.0Werkzeug2.2.3
whitebox2.3.1whiteboxgui2.3.0
widgetsnbextension3.6.4woops0.2.1
wordcloud1.8.2.2workdays1.4
wrapt1.14.1wsproto1.2.0
WTForms3.0.1xarray2023.1.0
xlrd2.0.1XlsxWriter3.0.9
xlwt1.3.0xmltodict0.12.0
xxhash3.2.0xyzservices2023.2.0
y-py0.5.9yahoo-finance1.4.0
yarl1.8.2ydata-profiling4.1.2
yfinance0.2.14youtube-dl2021.12.17
youtube-search2.1.2youtube-search-python1.6.6
ypy-websocket0.8.2zeep4.2.1
zict2.2.0zipp3.15.0
zope.event4.6zope.interface6.0

Python version: 3.9

Python packages

packageversionpackageversion
absl-py2.0.0alembic1.12.0
asttokens2.4.0astunparse1.6.3
backcall0.2.0blinker1.6.2
boto31.28.54botocore1.31.54
branca0.6.0cachetools5.3.1
certifi2023.7.22charset-normalizer3.2.0
click8.1.7cloudpickle2.2.1
cmake3.27.5comm0.1.4
contourpy1.1.1cycler0.11.0
Cython3.0.2databricks-cli0.17.8
datascience0.17.6debugpy1.8.0
decorator5.1.1dnspython2.4.2
docker6.1.3entrypoints0.4
exceptiongroup1.1.3executing1.2.0
filelock3.12.4Flask2.3.3
flatbuffers23.5.26folium0.14.0
fonttools4.42.1gast0.4.0
gitdb4.0.10GitPython3.1.37
google-auth2.23.0google-auth-oauthlib1.0.0
google-pasta0.2.0greenlet2.0.2
grpcio1.58.0gunicorn21.2.0
h5py3.9.0idna3.4
importlib-metadata6.8.0importlib-resources6.1.0
ipykernel6.25.2ipython8.15.0
itsdangerous2.1.2jedi0.19.0
Jinja23.1.2jmespath1.0.1
joblib1.3.2jsons1.6.3
jupyter_client8.3.1jupyter_core5.3.1
keras2.13.1kiwisolver1.4.5
libclang16.0.6lit17.0.1
Mako1.2.4Markdown3.4.4
MarkupSafe2.1.3matplotlib3.8.0
matplotlib-inline0.1.6mlflow2.7.1
mlpack4.2.1mpmath1.3.0
nest-asyncio1.5.8networkx3.1
numpy1.24.3nvidia-cublas-cu1111.10.3.66
nvidia-cuda-cupti-cu1111.7.101nvidia-cuda-nvrtc-cu1111.7.99
nvidia-cuda-runtime-cu1111.7.99nvidia-cudnn-cu118.5.0.96
nvidia-cufft-cu1110.9.0.58nvidia-curand-cu1110.2.10.91
nvidia-cusolver-cu1111.4.0.1nvidia-cusparse-cu1111.7.4.91
nvidia-nccl-cu112.14.3nvidia-nvtx-cu1111.7.91
oauthlib3.2.2opt-einsum3.3.0
packaging23.1pandas2.1.1
parso0.8.3pexpect4.8.0
pickleshare0.7.5Pillow10.0.1
platformdirs3.10.0plotly5.17.0
prompt-toolkit3.0.39protobuf4.24.3
psutil5.9.5ptyprocess0.7.0
pure-eval0.2.2pyarrow13.0.0
pyasn10.5.0pyasn1-modules0.3.0
Pygments2.16.1PyJWT2.8.0
pymongo4.5.0pyparsing3.1.1
python-dateutil2.8.2pytz2023.3.post1
PyYAML6.0.1pyzmq25.1.1
querystring-parser1.2.4requests2.31.0
requests-oauthlib1.3.1rsa4.9
s3transfer0.6.2scikit-learn1.3.1
scipy1.11.2six1.16.0
smmap5.0.1SQLAlchemy2.0.21
sqlparse0.4.4stack-data0.6.2
sympy1.12tabulate0.9.0
tenacity8.2.3tensorboard2.13.0
tensorboard-data-server0.7.1tensorflow2.13.0
tensorflow-estimator2.13.0tensorflow-io-gcs-filesystem0.34.0
termcolor2.3.0threadpoolctl3.2.0
toml0.10.2torch2.0.1
tornado6.3.3traitlets5.10.0
triton2.0.0typing_extensions4.5.0
typish1.9.3tzdata2023.3
urllib31.26.16wcwidth0.2.6
websocket-client1.6.3Werkzeug2.3.7
wrapt1.15.0xgboost2.0.0
zipp3.17.0

Python version: 3.10

Python packages

packageversionpackageversion
absl-py2.0.0alembic1.12.0
asttokens2.4.0astunparse1.6.3
backcall0.2.0blinker1.6.2
boto31.28.54botocore1.31.54
branca0.6.0cachetools5.3.1
certifi2023.7.22charset-normalizer3.2.0
click8.1.7cloudpickle2.2.1
cmake3.27.5comm0.1.4
contourpy1.1.1cycler0.11.0
Cython3.0.2databricks-cli0.17.8
datascience0.17.6debugpy1.8.0
decorator5.1.1dnspython2.4.2
docker6.1.3entrypoints0.4
exceptiongroup1.1.3executing1.2.0
filelock3.12.4Flask2.3.3
flatbuffers23.5.26folium0.14.0
fonttools4.42.1gast0.4.0
gitdb4.0.10GitPython3.1.37
google-auth2.23.0google-auth-oauthlib1.0.0
google-pasta0.2.0greenlet2.0.2
grpcio1.58.0gunicorn21.2.0
h5py3.9.0idna3.4
importlib-metadata6.8.0ipykernel6.25.2
ipython8.15.0itsdangerous2.1.2
jedi0.19.0Jinja23.1.2
jmespath1.0.1joblib1.3.2
jsons1.6.3jupyter_client8.3.1
jupyter_core5.3.1keras2.13.1
kiwisolver1.4.5libclang16.0.6
lit17.0.1Mako1.2.4
Markdown3.4.4MarkupSafe2.1.3
matplotlib3.8.0matplotlib-inline0.1.6
mlflow2.7.1mlpack4.2.0
mpmath1.3.0nest-asyncio1.5.8
networkx3.1numpy1.24.3
nvidia-cublas-cu1111.10.3.66nvidia-cuda-cupti-cu1111.7.101
nvidia-cuda-nvrtc-cu1111.7.99nvidia-cuda-runtime-cu1111.7.99
nvidia-cudnn-cu118.5.0.96nvidia-cufft-cu1110.9.0.58
nvidia-curand-cu1110.2.10.91nvidia-cusolver-cu1111.4.0.1
nvidia-cusparse-cu1111.7.4.91nvidia-nccl-cu112.14.3
nvidia-nvtx-cu1111.7.91oauthlib3.2.2
opt-einsum3.3.0packaging23.1
pandas2.1.1parso0.8.3
pexpect4.8.0pickleshare0.7.5
Pillow10.0.1platformdirs3.10.0
plotly5.17.0prompt-toolkit3.0.39
protobuf4.24.3psutil5.9.5
ptyprocess0.7.0pure-eval0.2.2
pyarrow13.0.0pyasn10.5.0
pyasn1-modules0.3.0Pygments2.16.1
PyJWT2.8.0pymongo4.5.0
pyparsing3.1.1python-dateutil2.8.2
pytz2023.3.post1PyYAML6.0.1
pyzmq25.1.1querystring-parser1.2.4
requests2.31.0requests-oauthlib1.3.1
rsa4.9s3transfer0.6.2
scikit-learn1.3.1scipy1.11.2
six1.16.0smmap5.0.1
SQLAlchemy2.0.21sqlparse0.4.4
stack-data0.6.2sympy1.12
tabulate0.9.0tenacity8.2.3
tensorboard2.13.0tensorboard-data-server0.7.1
tensorflow2.13.0tensorflow-estimator2.13.0
tensorflow-io-gcs-filesystem0.34.0termcolor2.3.0
threadpoolctl3.2.0toml0.10.2
torch2.0.1tornado6.3.3
traitlets5.10.0triton2.0.0
typing_extensions4.5.0typish1.9.3
tzdata2023.3urllib31.26.16
wcwidth0.2.6websocket-client1.6.3
Werkzeug2.3.7wrapt1.15.0
xgboost2.0.0zipp3.17.0

Python version: 3.11

Python packages

packageversionpackageversion
absl-py2.0.0alembic1.12.0
asttokens2.4.0astunparse1.6.3
backcall0.2.0blinker1.6.2
boto31.28.54botocore1.31.54
branca0.6.0cachetools5.3.1
certifi2023.7.22charset-normalizer3.2.0
click8.1.7cloudpickle2.2.1
cmake3.27.5comm0.1.4
contourpy1.1.1cycler0.11.0
Cython3.0.2databricks-cli0.17.8
datascience0.17.6debugpy1.8.0
decorator5.1.1dnspython2.4.2
docker6.1.3entrypoints0.4
executing1.2.0filelock3.12.4
Flask2.3.3flatbuffers23.5.26
folium0.14.0fonttools4.42.1
gast0.4.0gitdb4.0.10
GitPython3.1.37google-auth2.23.0
google-auth-oauthlib1.0.0google-pasta0.2.0
greenlet2.0.2grpcio1.58.0
gunicorn21.2.0h5py3.9.0
idna3.4importlib-metadata6.8.0
ipykernel6.25.2ipython8.15.0
itsdangerous2.1.2jedi0.19.0
Jinja23.1.2jmespath1.0.1
joblib1.3.2jsons1.6.3
jupyter_client8.3.1jupyter_core5.3.1
keras2.13.1kiwisolver1.4.5
libclang16.0.6lit17.0.1
Mako1.2.4Markdown3.4.4
MarkupSafe2.1.3matplotlib3.8.0
matplotlib-inline0.1.6mlflow2.7.1
mlpack4.2.0mpmath1.3.0
nest-asyncio1.5.8networkx3.1
numpy1.24.3nvidia-cublas-cu1111.10.3.66
nvidia-cuda-cupti-cu1111.7.101nvidia-cuda-nvrtc-cu1111.7.99
nvidia-cuda-runtime-cu1111.7.99nvidia-cudnn-cu118.5.0.96
nvidia-cufft-cu1110.9.0.58nvidia-curand-cu1110.2.10.91
nvidia-cusolver-cu1111.4.0.1nvidia-cusparse-cu1111.7.4.91
nvidia-nccl-cu112.14.3nvidia-nvtx-cu1111.7.91
oauthlib3.2.2opt-einsum3.3.0
packaging23.1pandas2.1.1
parso0.8.3pexpect4.8.0
pickleshare0.7.5Pillow10.0.1
platformdirs3.10.0plotly5.17.0
prompt-toolkit3.0.39protobuf4.24.3
psutil5.9.5ptyprocess0.7.0
pure-eval0.2.2pyarrow13.0.0
pyasn10.5.0pyasn1-modules0.3.0
Pygments2.16.1PyJWT2.8.0
pymongo4.5.0pyparsing3.1.1
python-dateutil2.8.2pytz2023.3.post1
PyYAML6.0.1pyzmq25.1.1
querystring-parser1.2.4requests2.31.0
requests-oauthlib1.3.1rsa4.9
s3transfer0.6.2scikit-learn1.3.1
scipy1.11.2six1.16.0
smmap5.0.1SQLAlchemy2.0.21
sqlparse0.4.4stack-data0.6.2
sympy1.12tabulate0.9.0
tenacity8.2.3tensorboard2.13.0
tensorboard-data-server0.7.1tensorflow2.13.0
tensorflow-estimator2.13.0tensorflow-io-gcs-filesystem0.34.0
termcolor2.3.0threadpoolctl3.2.0
toml0.10.2torch2.0.1
tornado6.3.3traitlets5.10.0
triton2.0.0typing_extensions4.5.0
typish1.9.3tzdata2023.3
urllib31.26.16wcwidth0.2.6
websocket-client1.6.3Werkzeug2.3.7
wrapt1.15.0xgboost2.0.0
zipp3.17.0

SageMath: 9.0

Data science packages

tensorflowtorch
2.12.02.0.0+cu118

GPU Support

NVIDIA DriverCUDA
520.61.0511.8.0

Python version: 3.8.10

Python packages

packageversionpackageversion
absl-py1.4.0access1.1.8
adal1.2.7aenum3.1.12
affine2.4.0aiobotocore2.5.0
aioconsole0.6.1aiofiles22.1.0
aiohttp3.8.1aioitertools0.11.0
aiosignal1.3.1aiosqlite0.17.0
alabaster0.7.13alembic1.10.2
altair4.2.0amqp5.1.1
analytics-python1.4.post1aniso86019.0.1
ansible2.9.6ansible-core2.13.8
antlr4-python3-runtime4.12.0anyio3.6.2
apache-airflow2.5.3apache-airflow-providers-common-sql1.3.4
apache-airflow-providers-ftp3.3.1apache-airflow-providers-http4.2.0
apache-airflow-providers-imap3.1.1apache-airflow-providers-sqlite3.3.1
apache-libcloud2.8.0apispec3.3.2
appdirs1.4.4applicationinsights0.11.10
argcomplete3.0.5argon2-cffi21.3.0
argon2-cffi-bindings21.2.0args0.1.0
arrow1.2.3asgiref3.6.0
asn1crypto1.5.1astor0.8.1
astroid2.15.2asttokens2.2.1
astunparse1.6.3async-generator1.10
async-timeout4.0.2asynctest0.13.0
atomicwrites1.4.1attrs22.2.0
audioread3.0.0Authlib1.2.0
autobahn23.1.2autograd1.5
Automat22.10.0avro1.11.1
avro-python31.10.2aws-requests-auth0.4.3
azure-core1.26.3Babel2.12.1
backcall0.2.0backoff1.10.0
backports.tempfile1.0backports.weakref1.0.post1
backports.zoneinfo0.2.1base64io1.0.3
bcrypt4.0.1beautifulsoup44.12.0
billiard4.1.0black23.3.0
bleach6.0.0blinker1.4
blis0.7.9bokeh2.4.3
boltons23.0.0boto2.49.0
boto31.26.76botocore1.29.76
Bottleneck1.3.7bqplot0.12.37
branca0.6.0Brotli1.0.9
brotlipy0.7.0bs40.0.1
build0.10.0bytecode0.14.0
CacheControl0.12.11cached-property1.5.2
cachelib0.9.0cachetools5.3.0
cachy0.3.0catalogue2.0.8
cattrs22.2.0certifi2022.12.7
certipy0.1.3cffi1.15.1
cfgv3.3.1chainer7.8.1
chardet5.1.0charset-normalizer2.1.1
cleo2.0.1click8.1.3
click-didyoumean0.3.0click-plugins1.1.1
click-repl0.2.0clickclick20.10.2
cligj0.7.2clikit0.5.1
clint0.5.1cloud-init23.1.1
cloudpickle2.2.1cmake3.25.0
colorama0.4.6coloredlogs15.0.1
colorlog4.8.0colour0.1.5
comm0.1.3commonmark0.9.1
confection0.0.4configobj5.0.6
configparser5.3.0ConfigUpdater3.1.1
confluent-kafka2.0.2connexion2.14.2
constantly15.1.0constructs10.1.300
contextily1.3.0contextlib221.6.0
contourpy1.0.7convertdate2.4.0
countryinfo0.1.2coverage6.5.0
coveralls3.3.1cramjam2.6.2
crashtest0.4.1crcmod1.7
cron-descriptor1.2.35croniter1.3.8
cryptography40.0.1css-html-js-minify2.5.5
cssselect1.2.0cssutils2.6.0
cupy-cuda11112.0.0curlify2.2.1
cx-Oracle8.3.0cycler0.11.0
cymem2.0.7Cython0.29.34
dash2.9.2dash-core-components2.0.0
dash-html-components2.0.0dash-renderer1.9.1
dash-table5.0.0dask2023.3.2
databricks-cli0.17.6dataclasses0.6
dataclasses-json0.5.7datadog0.45.0
dataprep0.4.4datascience0.17.6
datasets2.11.0dateparser1.1.8
DateTime5.1db-dtypes1.1.1
dbus-python1.2.16ddsketch2.0.4
ddtrace1.11.0debugpy1.6.6
decorator4.4.2deepdiff6.3.0
defusedxml0.7.1delta-spark2.2.0
Deprecated1.2.13deprecation2.1.0
descartes1.1.0dill0.3.6
dipy1.6.0distlib0.3.6
distributed2023.3.2distro1.4.0
distro-info=0.23ubuntu1Django4.2
djangorestframework3.14.0dmri-amico1.5.4
dmri-commit1.6.4dnspython1.16.0
docker6.0.1docopt0.6.2
docutils0.19dulwich0.21.3
dynamo-json1.2.0earthengine-api0.1.347
EasyProcess1.1ebaysdk2.2.0
ec2-hibinit-agent1.0.0ecdsa0.18.0
ee-extra0.0.15eemeter3.1.1
eerepr0.0.4eli50.13.0
email-validator1.3.1emoji2.2.0
entrypoint21.1entrypoints0.3
enum341.1.10envier0.4.0
esda2.4.3et-xmlfile1.1.0
etils1.1.1exceptiongroup1.1.1
exchange-calendars4.2.5execnet1.9.0
executing1.2.0facebook-business16.0.2
facebook-sdk3.1.0facebook-wda1.4.6
Faker18.3.2fastapi0.95.0
fastavro1.7.3fasteners0.18
fastjsonschema2.16.3fastnumbers5.0.1
fastparquet2023.2.0fastrlock0.8.1
fasttext0.9.2ffmpeg-python0.2.0
ffmpy0.3.0filelock3.10.7
Fiona1.8.22fire0.5.0
flake86.0.0Flask2.2.3
Flask-AppBuilder4.1.4Flask-Babel2.0.0
Flask-CacheBuster1.0.0Flask-Caching2.0.2
Flask-Compress1.13Flask-Cors3.0.10
Flask-JWT-Extended4.4.4Flask-Limiter3.3.0
Flask-Login0.6.2Flask-Session0.4.0
Flask-SQLAlchemy2.5.1Flask-WTF1.1.1
flatbuffers23.3.3folium0.13.0
fonttools4.39.3fqdn1.5.1
freezegun1.2.2frozendict2.3.6
frozenlist1.3.3fsspec2023.3.0
funcsigs1.0.2future0.18.3
fuzzywuzzy0.18.0gast0.4.0
gcsfs2023.3.0GDAL3.0.4
gdown4.7.1gdspy1.6.12
geeadd0.5.6geemap0.20.4
gensim4.3.1geocoder1.38.1
geographiclib2.0geoip24.6.0
geojson3.0.1geopandas0.12.2
geopy2.3.0geotext0.4.0
gevent22.10.2giddy2.3.4
gitapi1.0.1gitdb4.0.10
GitPython3.1.31goflow0.1.2
google-api-core2.11.0google-api-python-client2.83.0
google-auth2.17.1google-auth-httplib20.1.0
google-auth-oauthlib1.0.0google-cloud-bigquery3.9.0
google-cloud-bigquery-storage2.19.1google-cloud-core2.3.2
google-cloud-storage2.8.0google-crc32c1.5.0
google-pasta0.2.0google-resumable-media2.4.1
googleapis-common-protos1.59.0googlemaps4.10.0
gradio3.24.1gradio_client0.0.5
graphviz0.20.1great-expectations0.16.5
greenlet2.0.2gremlinpython3.6.2
grpc-google-iam-v10.12.6grpcio1.53.0
grpcio-status1.53.0grpcio-tools1.53.0
gspread5.7.2gunicorn20.1.0
h110.14.0h24.1.0
h33.7.6h5netcdf1.1.0
h5py3.8.0haversine2.8.0
hdfs2.7.0hdfs30.3.1
HeapDict1.0.1hgapi1.7.4
hibagent1.0.1hijri-converter2.2.4
holidays0.22hpack4.0.0
html5lib1.1htmlmin0.1.12
httpcore0.16.3httplib20.22.0
httplib2shim0.0.3httptools0.5.0
httpx0.23.3huggingface-hub0.13.3
humanfriendly10.0humanize4.6.0
hvac1.1.0hyperframe6.0.1
hyperlink21.0.0ibm-cloud-sdk-core3.16.5
ibm-watson7.0.0identify2.5.22
idna2.8ijson3.2.0.post0
ImageHash4.3.1imageio2.27.0
imageio-ffmpeg0.4.8imagesize1.4.1
importlib-metadata4.13.0importlib-resources5.12.0
incremental22.10.0inequality1.0.0
inflection0.5.1iniconfig2.0.0
installer0.7.0invoke2.0.0
ipaddress1.0.23ipyevents2.0.1
ipyfilechooser0.6.0ipykernel6.22.0
ipyleaflet0.17.2ipysheet0.7.0
ipython8.12.0ipython-genutils0.2.0
ipytree0.2.2ipywidgets7.7.5
iso86011.1.0isodate0.6.1
isoduration20.11.0isort5.12.0
itemadapter0.8.0itemloaders1.0.6
itsdangerous2.1.2jarowinkler1.2.3
jax0.4.8jdcal1.4.1
jedi0.18.2jeepney0.8.0
Jinja23.0.3jira3.5.0
jmespath1.0.1joblib1.2.0
JPype11.4.1jschema-to-python1.2.3
jsii1.79.0json50.9.11
jsondiff2.0.0jsonlines1.2.0
jsonpatch1.22jsonpath-ng1.5.3
jsonpickle3.0.1jsonpointer2.0
jsonschema4.17.3junit-xml1.9
jupyter1.0.0jupyter-console6.6.3
jupyter-events0.6.3jupyter-server-proxy3.2.2
jupyter-telemetry0.1.0jupyter-ydoc0.2.3
jupyter_client8.1.0jupyter_core5.3.0
jupyter_server2.5.0jupyter_server_fileid0.8.0
jupyter_server_terminals0.4.4jupyter_server_ydoc0.8.0
jupyterhub3.1.1jupyterhub-idle-culler1.2.1
jupyterhub-nativeauthenticator1.1.0jupyterlab3.6.3
jupyterlab-pygments0.2.2jupyterlab-widgets1.1.4
jupyterlab_server2.22.0jwcrypto1.4.2
jwt1.3.1kafka-python2.0.2
keplergl0.3.2keras2.12.0
Keras-Applications1.0.8Keras-Preprocessing1.1.2
keycloakauthenticator3.3.0keyring18.0.1
kiwisolver1.4.4knack0.10.1
kombu5.2.4korean-lunar-calendar0.3.1
langcodes3.3.0laspy2.4.1
launchpadlib1.10.13lazr.restfulclient0.14.2
lazr.uri1.0.3lazy-object-proxy1.9.0
lazy_loader0.2leafmap0.18.8
Levenshtein0.20.9libclang16.0.0
libcst0.4.9libpysal4.7.0
librosa0.10.0.post2lightgbm3.3.5
limits3.3.1linkify-it-py2.0.0
lit15.0.7llvmlite0.39.1
locket1.0.0lockfile0.12.2
logzero1.7.0lorem0.1.1
lxml4.9.2M2Crypto0.38.0
makefun1.15.1Mako1.2.4
mamba0.11.2mapclassify2.5.0
Markdown3.4.3markdown-it-py2.2.0
markdown22.4.8MarkupSafe2.1.2
marshmallow3.19.0marshmallow-enum1.5.1
marshmallow-oneofschema3.0.1marshmallow-sqlalchemy0.26.1
matplotlib3.6.3matplotlib-inline0.1.6
maxminddb2.2.0mccabe0.7.0
mdit-py-plugins0.3.3mdurl0.1.2
mechanize0.4.8meep1.0.6
mercantile1.2.1Metaphone0.6
mgwr2.1.2missingno0.5.2
mistune2.0.5ml-dtypes0.0.4
mlflow2.2.2mlpack4.0.1
mock5.0.1momepy0.5.4
monotonic1.6more-itertools4.2.0
moto4.1.6moviepy1.0.3
mpi4py3.1.4mpmath1.3.0
msal1.21.0msal-extensions1.0.0
msgpack1.0.5msrest0.7.1
msrestazure0.6.4mss7.0.1
multidict6.0.4multimethod1.9.1
multiprocess0.70.14multitasking0.0.11
munch2.5.0murmurhash1.0.9
mutagen1.46.0mypy1.1.1
mypy-extensions1.0.0mysql-connector-python8.0.29
mysqlclient2.1.1nbclassic0.5.4
nbclient0.7.3nbconvert7.3.0
nbformat5.8.0nbgitpuller1.1.1
nbsphinx0.9.1ndg-httpsclient0.5.1
nest-asyncio1.5.6netaddr0.7.19
netifaces0.10.4networkx3.0
nibabel5.1.0nlopt2.7.1
nltk3.8.1nodeenv1.7.0
nose1.3.7notebook6.5.3
notebook_shim0.2.2ntlm-auth1.1.0
numba0.56.4numpy1.23.5
nvidia-cublas-cu1111.11.3.6nvidia-cuda-runtime-cu1111.8.89
nvidia-cudnn-cu118.6.0.163nvidia-tensorrt8.4.1.5
nycflights130.0.3oauth2client4.1.3
oauthenticator15.0.0oauthlib3.1.0
ogr0.40.0olefile0.46
onetimepass1.0.1onnxruntime1.14.1
opencensus0.11.2opencensus-context0.1.3
opencv-contrib-python4.7.0.72opencv-python4.7.0.72
openflow0.1.2.4openpyxl3.1.2
opensearch-py2.2.0opentelemetry-api1.16.0
opt-einsum3.3.0ordered-set4.1.0
orjson3.8.9oscrypto1.3.0
osmnx1.2.2outcome1.2.0
overrides7.3.1packaging23.0
pamela1.0.0pandas1.5.3
pandas-gbq0.19.1pandas-market-calendars4.1.4
pandas-profiling3.6.6pandas-usaddress0.21
pandasql0.7.3pandocfilters1.5.0
paramiko3.1.0parsedatetime2.6
parsel1.7.0parso0.8.3
partd1.3.0pastel0.2.1
pathlib22.3.7.post1pathos0.3.0
pathspec0.9.0pathy0.10.1
patsy0.5.3pbr5.11.1
pdfkit1.0.0pendulum2.1.2
pep5170.13.0pexpect4.6.0
pg80001.29.4phik0.12.3
phonenumbers8.13.8pickleshare0.7.5
pika1.3.1Pillow9.5.0
pip-tools6.12.3pipenv2023.3.20
pkginfo1.9.6pkgutil_resolve_name1.3.10
platformdirs3.2.0plotly5.14.0
pluggy1.0.0ply3.11
Pmw2.1.1poetry-core1.5.2
pointpats2.3.0pooch1.6.0
portalocker2.7.0postal-address22.4.22.1
pox0.3.2ppft1.7.6.6
pprintpp0.4.0pre-commit3.2.2
premailer3.10.0preshed3.0.8
prettytable3.6.0priority2.0.0
prison0.2.1probableparsing0.0.1
proglog0.1.10progressbar24.2.0
prometheus-client0.16.0prometheus-flask-exporter0.22.3
promise2.3prompt-toolkit3.0.38
Protego0.2.1proto-plus1.22.2
protobuf4.22.1protobuf3-to-dict0.1.5
psutil5.9.4psycopg22.9.6
psycopg2-binary2.9.6ptyprocess0.7.0
publication0.0.3PuLP2.7.0
pure-eval0.2.2py1.11.0
py4j0.10.9.5pyarrow11.0.0
pyasn10.4.8pyasn1-modules0.2.8
pyathena2.23.0pybind112.10.4
pycairo1.23.0pycodestyle2.10.0
pycosat0.6.3pycountry22.3.5
pycountry-convert0.7.2pycparser2.21
pycron3.0.0PyCRS1.0.2
pycrypto2.6.1pycryptodome3.17
pycryptodomex3.17pycurl7.45.2
pydantic1.10.7pydata-google-auth1.7.0
pydeequ1.0.1PyDispatcher2.0.7
pydot1.4.2pydotplus2.0.2
pydub0.25.1pyexpect1.0.22
pyflakes3.0.1pygame2.3.0
pygeos0.14PyGithub1.58.1
pyglet2.0.5Pygments2.14.0
PyGObject3.36.0PyGreSQL5.2.4
pyhcl0.4.4PyJWT2.6.0
pykerberos1.1.14pylev1.4.0
pylint2.17.2pyluach2.2.0
PyMeeus0.5.12pymongo4.3.3
pymssql2.2.7PyMySQL1.0.3
PyNaCl1.5.0pyodbc4.0.35
pyOpenSSL23.1.1pypandoc1.11
pyparsing3.0.9PyPDF41.27.0
pyperclip1.8.2pypika-tortoise0.1.6
pypopulation2020.3pyproj3.5.0
pyproject_api1.5.1pyproject_hooks1.0.0
pyquery2.0.0pyrsistent0.15.5
pysal23.1pyscreenshot3.1
pyserial3.4pysftp0.2.9
pyshp2.3.1pysndfile1.4.4
PySocks1.7.1pyspark3.3.2
pystac1.7.1pystac-client0.6.1
pytest7.2.2pytest-cov4.0.0
pytest-forked1.6.0pytest-mock3.10.0
pytest-runner6.0.0pytest-xdist3.2.1
python-apt2.0.1+ubuntu0.20.4.1python-box7.0.1
python-crfsuite0.9.8python-daemon3.0.1
python-dateutil2.8.2python-debian=0.1.36ubuntu1
python-distutils-extra2.39python-docx0.8.11
python-dotenv1.0.0python-editor1.0.4
python-gitlab3.13.0python-gnupg0.5.0
python-http-client3.3.7python-jose3.3.0
python-json-logger2.0.7python-jwt4.0.0
python-keycloak2.14.0python-Levenshtein0.20.9
python-magic0.4.27python-multipart0.0.6
python-nvd30.15.0python-slugify8.0.1
python-stdnum1.18python-twitter3.5
python-utils3.5.2pytimeparse1.1.8
pytz2022.7.1pytz-deprecation-shim0.1.0.post0
pytzdata2020.1PyWavelets1.4.1
pywinrm0.3.0PyX0.16
PyYAML5.3.1pyzmq25.0.2
qtconsole5.4.2QtPy2.3.1
quantecon0.6.0querystring-parser1.2.4
queuelib1.6.2quilt35.2.0
rapidfuzz2.15.0rasterio1.3.6
rasterstats0.18.0ratelim0.1.6
ratelimit2.2.1readme-renderer37.3
redis4.5.4redshift-connector2.0.910
regex2021.11.10reportlab3.6.12
reportlib3.4.0repoze.lru0.7
requests2.28.2requests-aws4auth1.2.2
requests-file1.5.1requests-futures1.0.0
requests-kerberos0.12.0requests-ntlm1.1.0
requests-oauthlib1.3.1requests-toolbelt0.10.1
requests-unixsocket0.2.0resampy0.4.2
resolvelib0.8.1responses0.18.0
retry0.9.2retrying1.3.4
reverse-geocoder1.5.1rfc3339-validator0.1.4
rfc39861.5.0rfc3986-validator0.1.1
rich13.3.3roman4.0
rsa4.9Rtree1.0.1
ruamel.yaml0.17.17ruamel.yaml.clib0.2.7
rvlib0.0.6s3fs0.6.0
s3transfer0.6.0sacremoses0.0.53
sankee0.2.3sarif-om1.0.4
sasl0.3.1scandir1.10.0
schema0.7.5scikit-image0.20.0
scikit-learn1.2.2scipy1.9.1
scooby0.7.1scp0.14.5
scramp1.4.4scrape0.11.3
Scrapy2.8.0seaborn0.12.2
SecretStorage2.3.1segregation2.3.1
selenium4.8.3selinux3.0
semantic-version2.10.0semver3.0.0
Send2Trash1.8.0sendgrid6.10.0
sentencepiece0.1.97sentry-sdk1.18.0
service-identity21.1.0setproctitle1.3.2
setuptools-scm7.1.0sh2.0.3
shap0.41.0Shapely1.8.5.post1
shellingham1.5.0.post1shortuuid1.0.11
simpervisor0.4simple-salesforce1.12.3
simplejson3.16.0singledispatch4.0.0
six1.14.0sklearn-pandas2.2.0
slack-sdk3.20.2slackclient2.9.4
slicer0.0.7smart-open6.3.0
smdebug-rulesconfig1.0.1smmap5.0.0
sniffio1.3.0snowballstemmer2.2.0
snowflake-connector-python3.0.2snowflake-sqlalchemy1.4.7
snuggs1.4.7sortedcontainers2.4.0
sos4.4soundfile0.12.1
soupsieve2.4soxr0.3.4
spacy3.5.1spacy-legacy3.0.12
spacy-loggers1.0.4spaghetti1.7.2
spams2.6.5.4spglm1.0.8
Sphinx6.1.3sphinxcontrib-applehelp1.0.4
sphinxcontrib-devhelp1.0.2sphinxcontrib-htmlhelp2.0.1
sphinxcontrib-jsmath1.0.1sphinxcontrib-qthelp1.0.3
sphinxcontrib-serializinghtml1.1.5spint1.0.7
splot1.1.5.post1spopt0.5.0
spreg1.3.1spvcm0.3.0
SQLAlchemy1.4.41SQLAlchemy-JSONField1.0.1.post0
SQLAlchemy-Utils0.40.0sqlalchemy2-stubs0.0.2a32
sqlmodel0.0.8sqlparse0.4.3
srsly2.4.6ssh-import-id5.10
sshtunnel0.4.0stack-data0.6.2
starkbank-ecdsa2.2.0starlette0.26.1
statsd4.0.1statsmodels0.13.5
stevedore5.0.0stringcase1.2.0
structlog22.3.0swagger-ui-bundle0.0.9
sympy1.11.1systemd-python234
tabulate0.9.0tangled-up-in-unicode0.2.0
tblib1.7.0tenacity8.2.2
tensorboard2.12.1tensorboard-data-server0.7.0
tensorboard-plugin-wit1.8.1tensorboardX2.5
tensorflow2.12.0tensorflow-estimator2.12.0
tensorflow-io-gcs-filesystem0.32.0termcolor2.2.0
terminado0.17.1testpath0.6.0
testresources2.0.1text-unidecode1.3
tf-estimator-nightly2.13.0.dev2023040308Theano1.0.5
thinc8.1.9threadpoolctl3.1.0
thrift0.16.0tifffile2023.3.21
timer0.2.2timezonefinder6.2.0
tinycss21.2.1tldextract3.4.0
tobler0.9.0tokenizers0.13.2
toml0.10.2tomli2.0.1
tomlkit0.11.7toolz0.12.0
torch2.0.0+cu118torchaudio2.0.1+cu118
torchvision0.15.1+cu118tornado6.2
tortoise-orm0.19.3tox4.4.8
tqdm4.64.1traitlets5.9.0
traittypes0.2.1transformers4.27.4
trio0.22.0trio-websocket0.10.2
triton2.0.0trove-classifiers2023.3.9
Twisted22.10.0txaio23.1.1
typed-ast1.5.4typeguard2.13.3
typer0.7.0types-PyYAML6.0.12.9
types-requests2.28.11.17types-urllib31.26.25.10
typing3.7.4.3typing-inspect0.8.0
typing_extensions4.5.0tzdata2023.3
tzlocal4.3ua-parser0.16.1
uamqp1.6.4ubuntu-advantage-tools8001
uc-micro-py1.0.1ujson5.7.0
unattended-upgrades0.1unicodecsv0.14.1
Unidecode1.3.6uri-template1.2.0
uritemplate4.1.1urllib31.26.15
usaddress0.5.10uvicorn0.21.1
uvloop0.17.0varname0.8.2
vega-datasets0.9.0vine5.0.0
virtualenv20.21.0virtualenv-clone0.5.7
visions0.7.5vpython7.6.4
w3lib2.1.1wadllib1.3.3
wasabi1.1.1watchdog3.0.0
watchtower3.0.1watergrid1.1.1
wcwidth0.2.6webcolors1.13
webencodings0.5.1websocket-client1.1.0
websockets11.0Werkzeug2.2.3
whitebox2.3.1whiteboxgui2.3.0
widgetsnbextension3.6.4woops0.2.1
wordcloud1.8.2.2workdays1.4
wrapt1.14.1wsproto1.2.0
WTForms3.0.1xarray2023.1.0
xlrd2.0.1XlsxWriter3.0.9
xlwt1.3.0xmltodict0.12.0
xxhash3.2.0xyzservices2023.2.0
y-py0.5.9yahoo-finance1.4.0
yarl1.8.2ydata-profiling4.1.2
yfinance0.2.14youtube-dl2021.12.17
youtube-search2.1.2youtube-search-python1.6.6
ypy-websocket0.8.2zeep4.2.1
zict2.2.0zipp3.15.0
zope.event4.6zope.interface6.0

Data science packages

tensorflowtorch
2.12.02.0.0+cu118

GPU Support

NVIDIA DriverCUDA
520.61.0511.8.0

Python version: 3.8.10

Python packages

packageversionpackageversion
absl-py1.4.0access1.1.8
adal1.2.7aenum3.1.12
affine2.4.0aiobotocore2.5.0
aioconsole0.6.1aiofiles22.1.0
aiohttp3.8.1aioitertools0.11.0
aiosignal1.3.1aiosqlite0.17.0
alabaster0.7.13alembic1.10.2
altair4.2.0amqp5.1.1
analytics-python1.4.post1aniso86019.0.1
ansible2.9.6ansible-core2.13.8
antlr4-python3-runtime4.12.0anyio3.6.2
apache-airflow2.5.3apache-airflow-providers-common-sql1.3.4
apache-airflow-providers-ftp3.3.1apache-airflow-providers-http4.2.0
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rprojroot2.0.3rredlist0.7.0
RSQLite2.2.15rstudioapi0.13
RUnit0.4.32rversions2.1.1
Rvmmin2018-4.17.1s21.1.0
sandwich3.0-2sass0.4.2
scales1.2.0scatterplot3d0.3-41
ScottKnott1.3-0SDMTools1.1-221.2
sealasso0.1-3segmented1.6-0
sem3.1-15SemiPar1.0-4.2
semTools0.5-6seqinr4.2-16
seriation1.3.6sessioninfo1.2.2
setRNG2022.4-1sets1.0-21
sf1.0-8sfsmisc1.1-13
shape1.4.6shapefiles0.7
shiny1.7.2shinyjs2.1.0
SimComp3.3simsem0.5-16
slam0.1-50sn2.0.2
sna2.7snow0.4-4
snowfall1.84-6.2solrium1.2.0
sourcetools0.1.7sp1.5-0
spam2.9-1SparseM1.81
SpatialExtremes2.1-0spatstat2.3-4
spatstat.core2.4-4spatstat.data2.2-0
spatstat.geom2.4-0spatstat.linnet2.3-2
spatstat.random2.2-0spatstat.sparse2.1-1
spatstat.utils2.3-1spData2.0.1
spdep1.2-4SQUAREM2021.1
ssgraph1.13stabs0.6-4
StanHeaders2.21.0-7statmod1.4.36
statnet.common4.6.0stringi1.7.8
stringr1.4.0strucchange1.5-3
styler1.7.0subplex1.8
superml0.5.5SuppDists1.1-9.7
survey4.1-1survPresmooth1.1-11
svUnit1.0.6sybil2.2.0
synbreedData1.5sys3.4
systemfonts1.0.4tables0.9.6
taxize0.9.100tensor1.5
tensorA0.36.2terra1.6-7
testit0.13testthat3.1.4
textshaping0.3.6TH.data1.1-1
tibble3.1.8tidyr1.2.0
tidyselect1.1.2timeDate4021.104
timeSeries4021.104tinytex0.40
tis1.39tkrplot0.0-26
tmvtnorm1.5triebeard0.3.0
trimcluster0.1-5tripack1.3-9.1
truncnorm1.0-8truncreg0.2-5
tseries0.10-51TSP1.2-1
TTR0.24.3tweenr1.0.2
tzdb0.3.0ucminf1.1-4
units0.8-0urca1.3-0
urlchecker1.0.1urltools1.7.3
usethis2.1.6utf81.2.2
uuid1.1-0vcd1.4-10
vctrs0.4.1vegan2.6-2
VGAM1.1-7VGAMdata1.1-6
viridis0.6.2viridisLite0.4.0
vroom1.5.7waldo0.4.0
waveslim1.8.3wavethresh4.7.0
webshot0.5.3whisker0.4
widenet0.1-2WikidataQueryServiceR1.0.0
WikidataR2.3.3WikipediR1.5.0
wikitaxa0.4.0withr2.5.0
wk0.6.0worrms0.4.2
xfun0.31xlsx0.6.5
xlsxjars0.6.1XML3.99-0.10
xml21.3.3xopen1.0.0
xtable1.8-4xts0.12.1
yaml2.3.5zip2.2.0
zoo1.8-10

JupyterHub Server with Keycloak User Management

The JupyterHub Server, integrated with Keycloak User Management, offers a secure and powerful environment for your data science and analytics endeavors.

Accessing JupyterHub

  • Getting Started: Once your EC2 instance is up and running, access the JupyterHub Server through your web browser using the provided public IP address.

  • User Credentials: Use the default username jhub-admin and the initial password, which is the EC2 instance ID in the format i-0c7fadc4dc193eca7.

  • First Login: During your initial login, you'll be prompted to change the default password for added security.

Keycloak user management

  • Getting Started: You can access the admin console through your web browser using http://public_ip_address/auth/.

  • Credentials: Log in with the username keycloak-admin and the EC2 instance ID.

Login and start coding

Startup page

After the EC2 instance is started, you can access the JupyterHub Server with its public IP address. For example, if the IP address is 3.236.45.107, typing http://3.236.45.107 in the browser will bring you to the following startup page:

main page1

Credentials

The preconfigured username and password are jhub-admin and the EC2 instance ID.

main page2

Change password

If it is the first time for you to log in, you will be asked to change the password.

main page2

JupyterLab

main page2

Logout

main page2

main page2

main page2

User management

Admin console

The admin console can be accessed through http://3.236.45.107/auth

main page2

Credentials

The preconfigured username and password are keycloak-admin and the EC2 instance ID.

main page2

Switch to Realm JupyterHub-User

main page2

Create a new user

Click Add user

main page2

Enter username and click Create

main page2

Click Save

main page2

Set password

Select Credentials and click Set password

main page2

Enter password and make it temporary such that the user will be asked to change it when logging in for the first time

main page2

Click Save password

main page2

Logout

main page2

Linux with GUI Desktop

After the EC2 instance is started, you can access the Linux with GUI Desktop through Microsoft Remote Desktop.

Username and password

The default username is elm and the password is the EC2 instance ID that has the form of i-0c7fadc4dc193eca7.

main page

XFCE Desktop Environment

Steps to connect to the remote Linux GUI desktop

Install Microsoft Remote Desktop

The Microsoft Remote Desktop can be found from App Store (for Mac users).

main page

Start Microsoft Remote Desktop

main page

Add PC

The public address (like 54.198.198.85) is used for the PC name.

main page

Add a User Account

The default username is elm and the password is the EC2 instance ID that has the form of i-0c7fadc4dc193eca7.

main page

Accept the certificate

main page

The PC is added

main page

Clicking on the PC will connect to the remote Linux Desktop

main page

Log out of the Linux GUI Desktop

Select Logout

main page

Click Logout

main page

Linux SFTP Server

After the EC2 instance is started, you can access the SFTP Server through FileZilla.

Username and password

The default username is elm and the password is the EC2 instance ID that has the form of i-0c7fadc4dc193eca7.

main page

FileZilla

Steps to connect to the Linux SFTP Server

Install FileZilla

FileZilla can be downloaded here

Connect to the SFTP Server

  • Host: sftp://public_address (like sftp://54.146.32.239)
  • Username: elm
  • Password: the EC2 instance ID that has the form of i-0c7fadc4dc193eca7
  • Port: 2222

main page

Selecting "Always trust this host, add this key to the cache" will avoid showing this message.

main page

Once the server is connected, the directory share is used to exchange files.

main page

Location of shared folder

On the server, the shared folder is /data/elm/share.

Linux SFTP Server for Amazon S3

After the EC2 instance is started, you can access the SFTP Server through FileZilla.

Username and password

The default username is elm and the password is the EC2 instance ID that has the form of i-0c7fadc4dc193eca7.

main page

FileZilla

Steps to connect to the Linux SFTP Server

Install FileZilla

FileZilla can be downloaded here

Connect to the SFTP Server

  • Host: sftp://public_address (like sftp://54.146.32.239)
  • Username: elm
  • Password: the EC2 instance ID that has the form of i-0c7fadc4dc193eca7
  • Port: 2222

main page

Selecting "Always trust this host, add this key to the cache" will avoid showing this message.

main page

Once the server is connected, the directory share is used to exchange files.

main page

Location of shared folder

On the server, the shared folder is /data/elm/share. The S3 bucket is mounted at /data/elm/share/s3.

Stable Diffusion with Web User Interface

This AWS AMI is specifically tailored for Stable Diffusion, a state-of-the-art solution in image generation and training. It's an ideal tool for artists, developers, and AI enthusiasts, empowering them to harness the capabilities of machine learning to effortlessly create and modify images.

Access the web UI

Once your EC2 instance is up and running, you can easily access the Stable Diffusion WebUI using the instance's public IP address. Please note that the initial setup might take a few minutes for the complete initialization.

To start your experience, use the default username 'elm'. For your password, enter the EC2 instance ID, which follows the pattern 'i-0c7fadc4dc193eca7'.

main page

Stable Diffusion

main_page

VPN Server with Web Administration Interface AMI on AWS Marketplace

The VPN Server with Web GUI Admin is powered by OpenVPN which provides secure and encrypted communication channels, ensuring seamless connectivity and privacy for users across networks.

Once the EC2 instance is deployed, a VPN client elm is created and the certificate can be downloaded through the web admin panel where more clients can be created.

You can access the admin panel with its public IP address. The default username is elm and the password is the EC2 instance ID that has the form of i-0c7fadc4dc193eca7.

Subscribe to the AMI

main page

Continue to configure the EC2 instance

main page

Choose a region close to your location

main page

Choose an instance type

t2.micro is a good starting point for testing. Once everything is confirmed to work, you can switch to other instance types (more CPUs, high memory) that fit your need. main page

Create security group for the VPN Server

If you do not already have an SSH key pair, please generate a new one to use when logging into the VPN Server using ssh.

main page

Create SSH key pair with default values

main page

Launch your EC2 instance

main page

Go to EC2 console

main page

Select the new EC2 instance

main page

Public IP address and Instance ID

main page

Access the web admin

main page

Enter the web admin to download the certificate

main page

Download and install OpenVPN Client from https://openvpn.net/client/

Import the downloaded certificate

Connect to the VPN server

Connection status

Check the VPN status by accessing https://www.showmyip.com/

main page

Create new VPN client

main page

main page

Check the newly created client and download the certificate

main page

Revoke a client certificate

main page

When a new IP address (53.80.91.153) is assigned to the VPN server, the client profile needs to be updated.

Change instance type

To change the instance type once the server is tested, please go to "Launch instances", "Instance settings", and then "Change instance type".

Materials Science Workbench

This AMI provides pre-compiled versions of DFT and MD packages, available as modules, alongside necessary dependencies and additional utilities frequently used in computational materials science.

Features:

  • Pre-installed and configured packages for electronic structure and materials property calculations:

    • Quantum ESPRESSO

    • Abinit

    • Siesta

    • Lammps

    • Gromacs

  • Can be used with AWS ParallelCluster to deploy on-demand clusters or as a standalone EC2 instance for computational tasks.

This AMI is an ideal platform for researchers, engineers, and students involved in materials simulations, offering a ready-to-use environment to accelerate DFT, MD and other computational materials science workflows.

Once you have created a cluster or launched a standalone EC2 instance, run the following commands to display the available modules and load the required module:

module avail
module load module_name

Quantum ESPRESSO is an open-source first-principles density functional theory (DFT) materials modeling package based on plane waves and pseudopotentials. It is widely used for electronic-structure calculations and materials modeling at the nanoscale.

Abinit is another open-source software suite for first-principles DFT, with a focus on the calculation of the electronic properties of materials using pseudopotentials and plane waves. Abinit also includes tools for the study of phonons, dielectric properties, and many other properties of materials.

Siesta is an open-source DFT package optimized for electronic structure calculations of molecules and solids using localized basis sets. Siesta is highly efficient for large-scale systems, offering a balance between accuracy and computational cost, making it suitable for simulations involving complex materials and nanostructures.

LAMMPS is an open-source molecular dynamics (MD) software designed for simulating particles at the atomic, molecular, and mesoscale, widely used for materials science and engineering applications.

GROMACS is a high-performance molecular dynamics software designed for simulating the interactions of particles, with a primary focus on biomolecular systems like proteins, lipids, and nucleic acids. It is widely used in research areas such as biochemistry, biophysics, and chemistry for tasks like molecular modeling, drug discovery, and protein folding simulations. Known for its speed and scalability, GROMACS supports a wide range of algorithms for molecular dynamics and energy minimization, and it can run efficiently on both CPUs and GPUs.

Version 5.0

added GROMACS 2024.3

The following packages are included:

  • Quantum ESPRESSO 7.3.1
  • ABINIT 9.10.5
  • SIESTA 5.0.1
  • LAMMPS 29Aug2024
  • GROMACS 2024.3

Version 4.0

added LAMMPS 29Aug2024

The following packages are included:

  • Quantum ESPRESSO 7.3.1
  • ABINIT 9.10.5
  • SIESTA 5.0.1
  • LAMMPS 29Aug2024

Version 3.0

Added Siesta 5.0.1

The following packages are included:

  • Quantum ESPRESSO 7.3.1
  • ABINIT 9.10.5
  • SIESTA 5.0.1

Version 2.0

Added ABINIT 9.10.5

The following packages are included:

  • Quantum ESPRESSO 7.3.1
  • ABINIT 9.10.5

Version 1.0

Added Quantume ESPRESSO 7.3.1

The following package is included:

  • Quantum ESPRESSO 7.3.1

After the EC2 instance is started, you can access the RStudio Server with its public IP address. For example, if the IP address is 10.11.12.13, typing http://10.11.12.13 in the browser will bring you to the following startup page:

main page

The default username is ruser and the password is the EC2 instance ID that has the form of i-0c7fadc4dc193eca7.

RStudio Server on AWS Marketplace

Subscribe to the AMI

main page

Continue to configure the EC2 instance

main page

Choose a region close to your location

main page

Choose an instance type

t2.micro is a good starting point for testing. Once everything is confirmed to work, you can switch to other instance types (more CPUs, high memory) that fit your need. main page

Create security group for the Rstudio Server

If you do not already have an SSH key pair, please generate a new one to use when logging into the RStudio Server.

main page

Create SSH key pair with default values

main page

Choose "allow" to download your SSH key pair

main page

Launch your EC2 instance

main page

Go to EC2 console

main page

Select the new EC2 instance

main page

Public IP address and Instance ID

main page

Access the login page

main page

Enter RStudio IDE

main page

Change instance type

To change the instance type once the server is tested, please go to "Actions", "Instance settings", and then "Change instance type".

RStudio Server

R: 4.4.2

rstudio-server: 2023.03.0-548-arm64
    
OS: Ubuntu 22.04

Release Notes

Upgraded R to version 4.4.2 and R packages to their latest versions.

This AMI provides thousands of R packages covering various domains such as data science, machine learning, economitrics, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, reproducible research, phylogenetics, web technologies, hydrology, sports analytics, natural language processing, actuarial science, optimization, genomics, proteomics, metabolomics, transcriptomics, and other omics.

R packages (4294)

packageversionpackageversion
abc2.2.1abc.data1.1
ABCoptim0.15.0abcrf1.9
abglasso0.1.1abind1.4-8
abtest1.0.1accrualPlot1.0.7
acebayes1.10acepack1.4.2
ACNE0.9.1acnr1.0.0
acp2.1acs2.1.4
ACSWR1.0ActivePathways2.0.5
actuar3.3-4actuaRE0.1.5
ActuarialM0.1.0actuaryr1.1.1
actxps1.5.0ada2.0-5
adagio0.9.2adaptivetau2.3-2
adaptMCMC1.5adaptr1.4.0
ADAPTS1.0.22adaptsmoFMRI1.2
adaptTest1.2additivityTests1.1-4.2
ade41.7-22ade4TkGUI0.3-1
adegenet2.1.10adegraphics1.0-21
adehabitatHR0.4.22adehabitatHS0.3.18
adehabitatLT0.3.28adehabitatMA0.3.17
adephylo1.1-16adespatial0.3-24
ADGofTest0.3adimpro0.9.7.2
adiv2.2.1adjclust0.6.10
adlift1.4-5admisc0.36
AdMit2.1.9ads1.5-10
AdvancedBasketballStats1.0.1AER1.2-14
affy1.82.0affyio1.74.0
africamonitor0.2.4agricolae1.3-7
agricolaeplotr0.5.0agridat1.24
agriwater1.0.2agvgd0.1.2
AhoCorasickTrie0.1.2aion1.1.0
airGR1.7.6airGRdatasets0.2.1
airGRdatassim0.1.3airGRiwrm0.7.0
airGRteaching0.3.3airports0.1.0
airr1.5.0ajv1.0.0
akima0.6-3.4alabama2023.1.0
alakazam1.3.0aLFQ1.3.6
AlgDesign1.2.1.1aliases2entrez0.1.2
almanac1.0.0alpaca0.3.4
alphavantager0.1.3altair4.2.3
ALTopt0.1.2Amelia1.8.2
ammiBayes1.0-2ampir1.1.0
AMR2.1.1anabel3.0.1
AnaCoDa0.1.4.4anacor1.1-4
analogsea1.0.7.2analogue0.17-7
anesrake0.80animation2.7
anipaths0.10.3anMC0.2.5
annotate1.82.0AnnotationBustR1.3.0
AnnotationDbi1.66.0AnnuityRIR1.0-0
Anthropometry1.19anytime0.3.9
ao1.1.0aod1.3.3
aoos0.5.0AovBay0.1.0
apc2.0.0apcluster1.4.13
ape5.8apex1.0.6
APFr1.0.2aphid1.3.5
aphylo0.3-3apisensr1.0.0
aplot0.2.3apollo0.3.4
approximator1.2-8apsimx2.8.0
ARCensReg3.0.1archetypes2.2-0.1
archive1.1.9archivist2.3.8
ArDec2.1-1ARDL0.2.4
ardl.nardl1.3.0areal0.1.8
arfima1.8-1argo3.0.2
argparse2.2.3arima23.3.0
arkhe1.7.0arm1.14-4
aroma.affymetrix3.2.2aroma.apd0.7.0
aroma.cn1.7.1aroma.core3.3.1
aroma.light3.34.0arpr0.1.2
arrangements1.1.9arrow17.0.0.1
ars0.8arsenal3.6.3
aRxiv0.10ascii2.6
asd2.2ash1.0-15
ashr2.2-63AsioHeaders1.22.1-2
askpass1.2.1aspect1.0-6
ASSA2.0assertthat0.2.1
AssetCorr1.0.4astsa2.1
asymmetry2.0.4ata1.1.1
atom4R0.3-3atRisk0.1.0
attempt0.3.1attention0.4.0
AUC0.3.2audio0.1-11
autoFRK1.4.3autoimage2.2.3
automap1.1-12autostsm3.1.5
av0.9.2aweek1.0.3
aws2.5-6aws.signature0.6.0
awsMethods1.1-1AzureAppInsights0.3.1
AzureAuth1.3.3AzureCognitive1.0.1
AzureContainers1.3.2AzureCosmosR1.0.0
AzureGraph1.3.4AzureKusto1.1.3
AzureQstor1.0.1AzureRMR2.4.4
AzureStor3.7.0AzureTableStor1.0.0
AzureVision1.0.2AzureVM2.2.2
babelgene22.9babelwhale1.2.0
babette2.3.4BACCO2.1-0
BACCT1.0backports1.5.0
backtest0.3-4bacondecomp0.1.1
baggr0.7.8bain0.2.11
BalancedSampling2.0.6BaM1.0.3
bama1.3.0bamdit3.4.2
bamlss1.2-5BAMMtools2.1.12
bang1.0.4BANOVA1.2.1
BarcodingR1.0-3BART2.9.9
bartcs1.2.2bartMachine1.3.4.1
bartMachineJARs1.2.1BAS1.7.3
basad0.3.0base642.0.2
base64enc0.1-3base64url1.4
baseballr1.6.0basicMCMCplots0.2.7
BASiNET0.0.5BaSkePro1.1.1
BasketballAnalyzeR0.5.0BASS1.3.1
BatchExperiments1.4.3BatchJobs1.9
batchmeans1.0-4BAwiR1.3.2
baycn1.2.0bayefdr0.2.1
bayes4psy1.2.12bayesAB1.1.3
bayesammi0.2.0bayesanova1.6
BayesARIMAX0.1.1BayesBinMix1.4.1
bayesbio1.0.0bayesboot0.2.2
BayesBP1.1BayesCACE1.2.3
BayesCombo1.0BayesComm0.1-2
bayescopulareg0.1.3bayescount0.9.99-9
BayesCR2.1bayesCT0.99.3
BayesCTDesign0.6.1BayesDA2012.04-1
bayesDccGarch3.0.4bayesdfa1.3.3
bayesdistreg0.1.0bayesDP1.3.6
BayesFactor0.9.12-4.7BayesFM0.1.7
bayesforecast1.0.1bayesGAM0.0.2
bayesGARCH2.1.10BayesGOF5.2
BayesGPfit1.1.0BayesGWQS0.1.1
bayesian1.0.1bayesianETAS1.0.3
BayesianFactorZoo0.0.0.3Bayesiangammareg0.1.0
BayesianGLasso0.2.0BayesianLaterality0.1.2
BayesianNetwork0.3.2BayesianTools0.1.8
bayesianVARs0.1.4bayesImageS0.6-1
BayesLCA1.9bayesLife5.2-0
BayesLN0.2.10BayesLogit2.1
bayeslongitudinal0.1.0bayesm3.1-6
BayesMallows2.2.2bayesmeta3.4
bayesmix0.7-6bayesnec2.1.3.0
bayesplot1.11.1bayesQR2.4
bayesRecon0.3.1bayestestR0.15.0
bayesTFR7.4-2BayesTools0.2.17
BayesTree0.3-1.5BayesVarSel2.2.5
BayesX0.3-3BAYSTAR0.2-10
baytrends2.0.12BB2019.10-1
BBmisc1.13bbmle1.0.25.1
bbotk1.2.0BCBCSF1.0-1
BCC19970.1.1BClustLonG0.1.3
bcpa1.3.2bcrm0.5.4
BDgraph2.73bdrc1.1.0
bdsmatrix1.3-7BE0.2.4
beachmat2.20.0beadarray2.54.0
BeadDataPackR1.56.0beakr0.4.3
bearishTrader1.0.2beastier2.5.2
beautier2.6.12BED1.5.2
beepr2.0beeswarm0.4.0
benchmarkme1.0.8benchmarkmeData1.0.4
BenfordTests1.2.0bentcableAR0.3.1
Bergm5.0.7Bernadette1.1.5
berryFunctions1.22.5Bessel0.6-1
BetaBit2.2betafunctions1.9.0
betapart1.6betareg3.2-1
betategarch3.3BETS0.4.9
bets.covid191.0.0beyondWhittle1.2.1
bezier1.1.2bfast1.7.0
BGLR1.1.3BGVAR2.5.8
bgw0.1.3BH1.84.0-0
BHH22016.05.31BiasCorrector0.2.3
BiasedUrn2.0.12bibtex0.5.1
biclust2.0.3.1bidask2.0.6
bife0.7.2BIFIEsurvey3.6-6
biganalytics1.1.22bigchess1.9.1
bigD0.2.0bigleaf0.8.2
biglm0.9-3bigmemory4.6.4
bigmemory.sri0.1.8bigrquery1.5.1
bigsplines1.1-1bigtime0.2.3
BigVAR1.1.2bimets4.0.2
bindr0.1.1bindrcpp0.2.3
binhf1.0-3binman0.1.3
binom1.1-1.1binr1.1.1
binsegRcpp2023.8.31binseqtest1.0.4
bio3d2.4-5Biobase2.64.0
BiocFileCache2.12.0BiocGenerics0.50.0
BiocIO1.14.0BiocManager1.30.25
BiocParallel1.38.0BiocSingular1.20.0
BiocVersion3.19.1BioInsight0.3.1
biomaRt2.60.1biomartr1.0.7
biomformat1.32.0bioseq0.1.4
Biostrings2.72.1biotic0.1.2
bipartite2.20birtr1.0.0
BisqueRNA1.0.5bit4.5.0
bit644.5.2bitops1.0-9
biwavelet0.20.22bizdays1.0.16
bkmr0.2.2blaise1.3.11
blastula0.3.5blavaan0.5-6
blink1.1.0BLModel1.0.2
blob1.2.4blocklength0.1.5
blockmatrix1.0blockrand1.5
blocksdesign4.9blockTools0.6.5
blogdown1.19BLR1.6
BLRPM1.0BMA3.18.19
bmgarch2.0.0BMisc1.4.6
bmixture1.7BMS0.3.5
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viridisLite0.4.2visNetwork2.1.2
visualize4.5.0vkR0.2
volatilityTrader1.0.1volcano3D2.0.9
volleystat0.2.0vpc1.2.2
vroom1.6.5vrtest1.2
vsn3.72.0W3CMarkupValidator0.1-7
waiter0.2.5waldo0.5.3
warp0.2.1washdata0.1.4
WASP1.4.4waterData1.0.8
waterquality1.0.0WaveletComp1.1
wavelets0.3-0.2waveslim1.8.5
wavethresh4.7.3wavScalogram1.1.3
waywiser0.6.0wbs1.4
wbstats1.0.4wCorr1.9.8
WDI2.7.8wdm0.2.4
wdman0.2.6weatherOz1.0.0
WebAnalytics0.9.12webchem1.3.0
webdriver1.0.6WebGestaltR0.4.6
webmockr1.0.0webreadr0.4.0
webshot0.5.5webshot20.1.1
websocket1.4.2webutils1.2.2
wehoop2.1.0WeightedPortTest1.1
WeightIt1.3.1weights1.0.4
welo0.1.4WeMix4.0.3
WGCNA1.73WH1.1.2
whisker0.4.1whitebox2.4.0
whitening1.4.0whoami1.3.0
widgetframe0.3.1widgetTools1.82.0
WikidataQueryServiceR1.0.0WikidataR2.3.3
WikipediR1.7.1wikitaxa0.4.0
wildlifeDI1.0.0wilson2.4.2
windex2.0.8wINEQ1.2.1
withr3.0.2wk0.9.4
wktmo1.0.5wkutils0.1.3
wnl0.8.1wooldridge1.4-3
worcs0.1.15word2vec0.4.0
wordcloud2.6wordnet0.1-17
workflowr1.7.1workflows1.1.4
workflowsets1.1.0worldfootballR0.6.2
worldmet0.9.8worrms0.4.3
wpp20171.2-3wpp20191.1-1
wql1.0.1WrightMap1.4
writexl1.5.1WriteXLS6.7.0
wrMisc1.15.2wrProteo1.12.0
WRSS3.1wrswoR1.1.1
WRTDStidal1.1.4WufooR1.0.1
x121.10.3x13binary1.1.61
xaringan0.30XBRL0.99.19.1
xfun0.49xgboost1.7.8.1
xgxr1.1.2XLConnect1.1.0
xlsx0.6.5xlsxjars0.6.1
XML3.99-0.17xml21.3.6
XML2R0.0.8xmlrpc21.1
xopen1.0.1xplain0.2.2
xpose0.4.18xpose.nlmixr20.4.0
xpose44.7.3xslt1.4.6
xtable1.8-4xts0.14.1
XVector0.44.0xxIRT2.1.2
yaImpute1.0-34.1yaml2.3.10
yardstick1.3.1yesno0.1.3
yhatr0.15.1ympes1.6.0
yorkr0.0.42ypssc1.1.0
yuima1.15.27yulab.utils0.1.7
zeallot0.1.0zen4R0.10
zic0.9.1ZIM1.1.0
ZINARp0.1.0zip2.3.1
zipfR0.6-70zlib1.0.3
zlibbioc1.50.0zoo1.8-12
ZRA0.2ztable0.2.3
zTree1.0.7zyp0.11-1

RStudio Server

R: 4.4.1

rstudio-server: 2023.03.0-548-arm64

OS: Ubuntu 22.04

Release Notes

First release for ARM

This AMI provides thousands of R packages covering various domains such as data science, machine learning, economitrics, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, reproducible research, phylogenetics, web technologies, hydrology, sports analytics, natural language processing, actuarial science, optimization, genomics, proteomics, metabolomics, transcriptomics, and other omics.

R packages (4288)

packageversionpackageversion
PackageVersionabc2.2.1
abc.data1.1ABCoptim0.15.0
abcrf1.9abglasso0.1.1
abind1.4-8abtest1.0.1
accrualPlot1.0.7acebayes1.10
acepack1.4.2ACNE0.9.1
acnr1.0.0acp2.1
acs2.1.4ACSWR1.0
ActivePathways2.0.5actuar3.3-4
actuaRE0.1.5ActuarialM0.1.0
actuaryr1.1.1actxps1.5.0
ada2.0-5adagio0.9.2
adaptivetau2.3-1adaptMCMC1.5
adaptr1.4.0ADAPTS1.0.22
adaptsmoFMRI1.2adaptTest1.2
additivityTests1.1-4.2ade41.7-22
ade4TkGUI0.3-1adegenet2.1.10
adegraphics1.0-21adehabitatHR0.4.22
adehabitatHS0.3.18adehabitatLT0.3.28
adehabitatMA0.3.17adephylo1.1-16
adespatial0.3-24ADGofTest0.3
adimpro0.9.7adiv2.2.1
adjclust0.6.9adlift1.4-5
admisc0.36AdMit2.1.9
ads1.5-10AdvancedBasketballStats1.0.1
AER1.2-13affy1.82.0
affyio1.74.0africamonitor0.2.4
agricolae1.3-7agricolaeplotr0.5.0
agridat1.23agriwater1.0.2
agvgd0.1.2AhoCorasickTrie0.1.2
aion1.0.4airGR1.7.6
airGRdatasets0.2.1airGRdatassim0.1.3
airGRiwrm0.6.2airGRteaching0.3.3
airports0.1.0airr1.5.0
ajv1.0.0akima0.6-3.4
alabama2023.1.0alakazam1.3.0
aLFQ1.3.6AlgDesign1.2.1
aliases2entrez0.1.2almanac1.0.0
alpaca0.3.4alphavantager0.1.3
altair4.2.3ALTopt0.1.2
Amelia1.8.2ammiBayes1.0-2
ampir1.1.0AMR2.1.1
anabel3.0.1AnaCoDa0.1.4.4
anacor1.1-4analogsea1.0.7.2
analogue0.17-6anesrake0.80
animation2.7anipaths0.10.3
anMC0.2.5annotate1.82.0
AnnotationBustR1.3.0AnnotationDbi1.66.0
AnnuityRIR1.0-0Anthropometry1.19
anytime0.3.9ao1.1.0
aod1.3.3aoos0.5.0
AovBay0.1.0apc2.0.0
apcluster1.4.13ape5.8
apex1.0.6APFr1.0.2
aphid1.3.5aphylo0.3-3
apisensr1.0.0aplot0.2.3
apollo0.3.3approximator1.2-8
apsimx2.8.0ARCensReg3.0.1
archetypes2.2-0.1archive1.1.9
archivist2.3.8ArDec2.1-1
ARDL0.2.4ardl.nardl1.3.0
areal0.1.8arfima1.8-1
argo3.0.2argparse2.2.3
arima23.3.0arkhe1.7.0
arm1.14-4aroma.affymetrix3.2.2
aroma.apd0.7.0aroma.cn1.7.1
aroma.core3.3.1aroma.light3.34.0
arpr0.1.2arrangements1.1.9
arrow17.0.0.1ars0.8
arsenal3.6.3aRxiv0.10
ascii2.6asd2.2
ash1.0-15ashr2.2-63
AsioHeaders1.22.1-2askpass1.2.0
aspect1.0-6ASSA2.0
assertthat0.2.1AssetCorr1.0.4
astsa2.1asymmetry2.0.4
ata1.1.1atom4R0.3-3
atRisk0.1.0attempt0.3.1
attention0.4.0AUC0.3.2
audio0.1-11autoFRK1.4.3
autoimage2.2.3automap1.1-12
autostsm3.1.5av0.9.1
aweek1.0.3aws2.5-5
aws.signature0.6.0awsMethods1.1-1
AzureAppInsights0.3.1AzureAuth1.3.3
AzureCognitive1.0.1AzureContainers1.3.2
AzureCosmosR1.0.0AzureGraph1.3.4
AzureKusto1.1.3AzureQstor1.0.1
AzureRMR2.4.4AzureStor3.7.0
AzureTableStor1.0.0AzureVision1.0.2
AzureVM2.2.2babelgene22.9
babelwhale1.2.0babette2.3.4
BACCO2.1-0BACCT1.0
backports1.5.0backtest0.3-4
bacondecomp0.1.1baggr0.7.8
bain0.2.11BalancedSampling2.0.6
BaM1.0.3bama1.3.0
bamdit3.4.1bamlss1.2-4
BAMMtools2.1.12bang1.0.4
BANOVA1.2.1BarcodingR1.0-3
BART2.9.9bartcs1.2.2
bartMachine1.3.4.1bartMachineJARs1.2.1
BAS1.7.3basad0.3.0
base642.0.1base64enc0.1-3
base64url1.4baseballr1.6.0
basicMCMCplots0.2.7BASiNET0.0.5
BaSkePro1.1.1BasketballAnalyzeR0.5.0
BASS1.3.1BatchExperiments1.4.3
BatchJobs1.9batchmeans1.0-4
BAwiR1.3.2baycn1.2.0
bayefdr0.2.1bayes4psy1.2.12
bayesAB1.1.3bayesammi0.1.0
bayesanova1.6BayesARIMAX0.1.1
BayesBinMix1.4.1bayesbio1.0.0
bayesboot0.2.2BayesBP1.1
BayesCACE1.2.3BayesCombo1.0
BayesComm0.1-2bayescopulareg0.1.3
bayescount0.9.99-9BayesCR2.1
bayesCT0.99.3BayesCTDesign0.6.1
BayesDA2012.04-1bayesDccGarch3.0.4
bayesdfa1.3.3bayesdistreg0.1.0
bayesDP1.3.6BayesFactor0.9.12-4.7
BayesFM0.1.7bayesforecast1.0.1
bayesGAM0.0.2bayesGARCH2.1.10
BayesGOF5.2BayesGPfit1.1.0
BayesGWQS0.1.1bayesian1.0.1
bayesianETAS1.0.3BayesianFactorZoo0.0.0.2
Bayesiangammareg0.1.0BayesianGLasso0.2.0
BayesianLaterality0.1.2BayesianNetwork0.3.2
BayesianTools0.1.8bayesianVARs0.1.4
bayesImageS0.6-1BayesLCA1.9
bayesLife5.2-0BayesLN0.2.10
BayesLogit2.1bayeslongitudinal0.1.0
bayesm3.1-6BayesMallows2.2.2
bayesmeta3.4bayesmix0.7-6
bayesnec2.1.3.0bayesplot1.11.1
bayesQR2.4bayesRecon0.3.1
bayestestR0.14.0bayesTFR7.4-2
BayesTools0.2.17BayesTree0.3-1.5
BayesVarSel2.2.5BayesX0.3-3
BAYSTAR0.2-10baytrends2.0.12
BB2019.10-1BBmisc1.13
bbmle1.0.25.1bbotk1.1.0
BCBCSF1.0-1BCC19970.1.1
BClustLonG0.1.3bcpa1.3.2
bcrm0.5.4BDgraph2.73
bdrc1.1.0bdsmatrix1.3-7
BE0.2.4beachmat2.20.0
beadarray2.54.0BeadDataPackR1.56.0
beakr0.4.3bearishTrader1.0.2
beastier2.5.1beautier2.6.12
BED1.5.2beepr2.0
beeswarm0.4.0benchmarkme1.0.8
benchmarkmeData1.0.4BenfordTests1.2.0
bentcableAR0.3.1Bergm5.0.7
Bernadette1.1.5berryFunctions1.22.5
Bessel0.6-1BetaBit2.2
betafunctions1.9.0betapart1.6
betareg3.2-1betategarch3.3
BETS0.4.9bets.covid191.0.0
beyondWhittle1.2.1bezier1.1.2
bfast1.6.1BGLR1.1.2
BGVAR2.5.7bgw0.1.3
BH1.84.0-0BHH22016.05.31
BiasCorrector0.2.2BiasedUrn2.0.12
bibtex0.5.1biclust2.0.3.1
bidask2.0.6bife0.7.2
BIFIEsurvey3.6-6biganalytics1.1.22
bigchess1.9.1bigD0.2.0
bigleaf0.8.2biglm0.9-3
bigmemory4.6.4bigmemory.sri0.1.8
bigrquery1.5.1bigsplines1.1-1
bigtime0.2.3BigVAR1.1.2
bimets4.0.2bindr0.1.1
bindrcpp0.2.3binhf1.0-3
binman0.1.3binom1.1-1.1
binr1.1.1binsegRcpp2023.8.31
binseqtest1.0.4bio3d2.4-4
Biobase2.64.0BiocFileCache2.12.0
BiocGenerics0.50.0BiocIO1.14.0
BiocManager1.30.25BiocParallel1.38.0
BiocSingular1.20.0BiocVersion3.19.1
BioInsight0.3.1biomaRt2.60.1
biomartr1.0.7biomformat1.32.0
bioseq0.1.4Biostrings2.72.1
biotic0.1.2bipartite2.20
birtr1.0.0BisqueRNA1.0.5
bit4.0.5bit644.0.5
bitops1.0-8biwavelet0.20.22
bizdays1.0.16bkmr0.2.2
blaise1.3.11blastula0.3.5
blavaan0.5-6blink1.1.0
BLModel1.0.2blob1.2.4
blocklength0.1.5blockmatrix1.0
blockrand1.5blocksdesign4.9
blockTools0.6.4blogdown1.19
BLR1.6BLRPM1.0
BMA3.18.17bmgarch2.0.0
BMisc1.4.6bmixture1.7
BMS0.3.5BMTAR0.1.1
bnlearn5.0.1BNPTSclust2.0
BNSP2.2.3bnstruct1.0.15
boa1.1.8-2boilerpipeR1.3.2
BOIN2.7.2boiwsa1.1.1
Bolstad0.2-41Bolstad21.0-29
bondAnalyst1.0.1bookdown0.40
Boom0.9.15BoomSpikeSlab1.2.6
bootnet1.6BootPR1.0
bootstrap2019.6bootUR1.0.4
BoSSA3.7boussinesq1.0.6
boxr0.3.6bpca1.3-6
bqtl1.0-36BradleyTerry21.1-2
brainR1.6.0brandwatchR0.3.0
breakfast2.4brew1.0-10
brglm0.7.2brglm20.9.2
bridgesampling1.1-2BRINDA0.1.5
brio1.1.5brms2.21.0
Brobdingnag1.2-9broman0.84
broom1.0.6broom.helpers1.17.0
brotli1.3.0bsam1.1.3
bsamGP1.2.5BSgenome1.72.0
bsicons0.1.2bslib0.8.0
BsMD2023.920bspec1.6
bspmma0.1-2bssm2.0.2
BSSprep0.1bsts0.9.10
bsvars3.1bsvarSIGNs1.0.1
BTLLasso0.1-13BTM0.3.7
bullishTrader1.0.1bundesbank0.1-12
BurStFin1.3BurStMisc1.1
BVAR1.0.5bvarsv1.1
bvartools0.2.4bvls1.4
C500.1.8ca0.71.1
cabinets0.6.0cabootcrs2.1.0
cachem1.1.0cacIRT1.4
CADFtest0.3-3caffsim0.2.2
Cairo1.6-2CALANGO1.0.20
calculus1.0.1calibrar0.9.0
calibrate1.7.7CalibrateSSB1.3.0
calibrator1.2-8callr3.7.6
cancensus0.5.7candisc0.9.0
CANSIM2R1.14.1caper1.0.3
captr0.3.0capushe1.1.2
car3.1-2caRamel1.4
CARBayes6.1.1CARBayesdata3.0
CARBayesST4.0carData3.0-5
cards0.2.2caret6.0-94
carfima2.0.2caribou1.1-1
carrier0.1.1cartogram0.3.0
Cascade2.1CascadeData1.4
CAST1.0.2castor1.8.2
CatDataAnalysis0.1-5caTools1.18.3
catR3.17causact0.5.5
CausalImpact1.3.0CAvariants6.0
CB21.3.4cbioportalR1.1.0
cbsodataR1.0.1ccaPP0.3.4
cccp0.3-1cdlTools1.13
CDM8.2-6cds1.0.3
CellNOptR1.50.0cellranger1.1.0
censReg0.5-38censusapi0.8.0
CEoptim1.3CePa0.8.0
CeRNASeek2.1.3cffr1.1.1
cfr0.1.1CFtime1.4.1
ChainLadder0.2.19chandwich1.1.6
changepoint2.2.4changepoint.geo1.0.2
changepoint.np1.0.5checkLuhn1.1.0
checkmate2.3.2checkpoint1.0.2
ChemoSpec6.1.10ChemoSpecUtils1.0.4
cherryblossom0.1.0chess1.0.1
chilemapas0.3.0chk0.9.2
choiceDes0.9-3cholera0.8.0
CholWishart1.1.2choroplethr3.7.3
choroplethrMaps1.0.1chromoMap4.1.1
chromote0.3.1chron2.3-61
cifti0.4.5cinterpolate1.0.2
circlize0.4.16CircSpaceTime0.9.0
CircStats0.2-6circular0.5-1
ciTools0.6.1Ckmeans.1d.dp4.3.5
Claddis0.7.0clarabel0.9.0.1
clarifai0.4.2classInt0.4-10
cleanepi1.0.2clevr0.1.2
cli3.6.3clifro3.2-5
climatol4.1.0clime0.5.0
clinDR2.4.1clinfun1.1.5
clinicalsignificance2.0.0clinPK0.13.0
clinsig1.2clipr0.8.0
clisymbols1.2.0clmplus1.0.0
clock0.7.1clubSandwich0.5.11
clue0.3-65clusterGeneration1.3.8
clustermole1.1.1clusterProfiler4.12.6
clusterSEs2.6.5clustMixType0.4-2
ClustVarLV2.1.1clv0.3-2.4
cmaes1.0-12cmaesr1.0.3
CMLS1.0-1cmm1.0
cmocean0.3-2cmprsk2.2-12
cmrutils1.3.1CNLTreg0.1-2
CNLTtsa0.1-2cNORM3.3.0
CNORode1.46.0coalescentMCMC0.4-4
coarseDataTools0.6-6cobalt4.5.5
cobs1.3-8coconots1.1.3
COCONUT1.0.2cocor1.1-4
cocorresp0.4-4cocron1.0-1
coda0.19-4.1codebook0.9.2
codebookr0.1.8coin1.4-3
cointReg0.2.0colf0.1.3
collapse2.0.16collapsibleTree0.1.8
collections0.3.7colmozzie1.1.1
colorr1.0.0colorRamps2.3.4
colorspace2.1-1colourpicker1.3.0
colourvalues0.3.9combinat0.0-8
combinedevents0.1.1CombinS1.1-1
ComICS1.0.4CommonJavaJars1.1-0
commonmark1.9.1compare0.2-6
compas0.1.1complex1.0.0
ComplexHeatmap2.20.0CompQuadForm1.4.3
comprehenr0.6.10conditionz0.1.0
coneproj1.19conf.design2.0.0
config0.3.2confintr1.0.2
conflicted1.2.0conos1.5.2
conquer1.3.3conquestr1.3.4
constrainedKriging0.2-8contactdata1.0.0
contfrac1.1-12ContourFunctions0.1.2
convevol2.2.1convey1.0.0
coop0.6-3cops1.11-3
copula1.1-4copulaData0.0-2
copulaedas1.4.3cordillera1.0-0
corHMM2.8coro1.0.4
corona0.3.0coronavirus0.4.1
corpcor1.6.10corpora0.6
corporaexplorer0.9.0corrgram1.14
corrplot0.94cosa2.1.0
CoSMoS2.1.0costat2.4.1
countrycode1.6.0CovCombR1.0
COVID193.0.3covid19.analytics2.1.3.3
covid19br0.1.8covid19dbcand0.1.1
covid19france0.1.0covid19italy0.3.1
covid19sf0.1.2covid19swiss0.1.0
covid19us0.1.9CovidMutations0.1.3
cowplot1.1.3cp4p0.3.6
CPBayes1.1.0cplm0.7-12
cpp110.5.0cpp11armadillo0.3.3
CptNonPar0.2.1CRABS1.2.0
crawl2.3.0crayon1.5.3
crch1.2-1credentials2.0.1
credule0.1.4crfsuite0.4.2
cricketdata0.2.3cricketr0.0.26
CRM1.2.4crmPack1.0.6
crossdes1.1-2crosslag0.1.0
Crossover0.1-22crosstalk1.2.1
crs0.15-37crseEventStudy1.2.2
crsmeta0.3.0crul1.5.0
crunch1.30.4crunchy0.3.3
cryptoQuotes1.3.1cSEM0.5.0
CSGo0.6.7cshapes2.0
CSHShydRology1.4.2csodata1.5.0
cstab0.2-2csv0.6.2
ctbi2.0.5ctmcmove1.2.9
ctmm1.2.0ctrdata1.19.2
CTT2.3.3CTTShiny0.1
ctv0.9-5cubature2.1.1
cubble1.0.0cubelyr1.0.2
cubfits0.1-4Cubist0.4.4
cumSeg1.3curl5.2.2
cvar0.5cvAUC1.1.4
CVST0.2-3CVXR1.0-14
D3mirt2.0.4d3Network0.5.2.1
DAAG1.25.6dae3.2.28
daewr1.2-11dagitty0.3-4
DAKS2.1-3DALEX2.4.3
DAMOCLES2.3data.table1.16.0
data.tree1.1.0DatabaseConnector6.3.2
DataExplorer0.8.3dataone2.2.2
datapack1.4.1datapasta3.1.0
dataRetrieval2.7.16datarobot2.18.6
dataseries0.2.0dataverse0.3.14
datawizard0.12.3date1.2-42
dateback1.0.5datetimeoffset0.3.1
datetimeutils0.6-4dbhydroR0.2-8
DBI1.2.3DBItest1.8.1
dbmss2.9-2dbparser2.0.3
dbplyr2.5.0dbscan1.2-0
dbx0.3.2DChaos0.1-7
dclone2.3-2DCluster0.2-10
DClusterm1.0-1dcov0.1.1
dCovTS1.4dcurver0.9.2
ddalpha1.3.15DDD5.2.2
dde1.0.5DDPM0.1.0
deBInfer0.4.4debugme1.2.0
decompr6.4.0deducorrect1.3.7
deductive1.0.0DeductiveR1.0.0
deeptime2.0.0Delaporte8.4.1
DelayedArray0.30.1DelayedMatrixStats1.26.0
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soilhypfit0.1-7soilwater1.0.5
solaR0.46solartime0.0.2
solrium1.2.0solvebio2.15.0
soma1.2.0sonicLength1.4.7
sorvi0.8.21SoupX1.6.2
sourcetools0.1.7-1sp2.1-4
sp23design0.9-1spacefillr0.3.3
spacetime1.3-2spam2.10-0
spaMM4.5.0spant2.23.0
sparklyr1.8.6sparktex0.1
sparr2.3-15SparseArray1.4.8
sparseDFM1.0sparseinv0.1.3
SparseM1.84-2sparseMatrixStats1.16.0
sparseMVN0.2.2sparsevar0.1.0
spatgraphs3.4spatialCovariance0.6-9
SpatialEpi1.2.8SpatialExperiment1.14.0
SpatialExtremes2.1-0SpatialPosition2.1.2
spatialprobit1.0.4spatialreg1.3-5
spatialsample0.5.1SpatialTools1.0.5
spatialwidget0.2.5spatstat3.1-1
spatstat.data3.1-2spatstat.explore3.3-2
spatstat.geom3.3-3spatstat.linnet3.2-1
spatstat.model3.3-1spatstat.random3.3-2
spatstat.sparse3.1-0spatstat.univar3.0-1
spatstat.utils3.1-0spBayes0.4-7
spBayesSurv1.1.8Spbsampling1.3.5
spd2.0-1spData2.3.3
spdep1.3-6spec0.1.9
spectral2.0speff2trial1.0.5
SPEI1.8.1spelling2.3.0
sperrorest3.0.5sphet2.0
spiderbar0.2.5spikeslab1.1.6
spikeSlabGAM1.1-19spINAR0.2.0
spind2.2.1splancs2.01-45
SPLICE1.1.2splines20.5.3
splitstackshape1.4.8splm1.6-5
spls2.2-3splus2R1.3-5
spmodel0.8.0spmoran0.2.3
SportsTour0.1.0sportyR2.2.2
sps0.5.4spselect0.0.1
spsur1.0.2.5spsurvey5.5.1
spTimer3.3.3sptotal1.0.1
sqldf0.4-11SqlRender1.18.1
SQRL1.0.2SQUAREM2021.1
srvyr1.3.0ssanv1.1
SSBtools1.5.2ssfa1.2.2
ssgraph1.15ssize.fdr1.3
ssizeRNA1.3.2ssMousetrack1.1.6
ssmrob1.0SSN20.2.1
sstvars1.0.1stable1.1.6
stabledist0.7-2stabs0.6-4
staggered1.1stampr0.3.1
StanHeaders2.32.10StanMoMo1.2.0
stargazer5.2.3starma1.3
stars0.6-6starter0.1.15
STARTS1.3-8startupmsg0.9.7
statcanR0.2.6statcodelists0.9.2
statcomp0.1.0statebins1.4.0
statespacer0.5.0stationaRy0.5.1
statip0.2.3StatMatch1.4.2
statmod1.5.0statnet.common4.9.0
StatRank0.0.6statVisual1.2.1
steadyICA1.0SteinIV0.1-1
STFTS0.1.0stinepack1.5
stlplus0.5.1stm1.3.7
StMoMo0.4.1stochQN0.1.2-1
stochvol3.2.4stockAnalyst1.0.1
stops1.6-2stopwords2.3
storr1.2.5stplanr1.2.2
stR0.7strand0.2.0
strap1.6-1stratification2.2-7
streamDepletr0.2.0streamR0.4.5
stringdist0.9.12stringfish0.16.0
stringi1.8.4stringmagic1.1.2
stringr1.5.1strucchange1.5-4
strucchangeRcpp1.5-3-1.0.4StructuralDecompose0.1.1
styler1.10.3subplex1.9
subscore3.3sufficientForecasting0.1.0
sugrrants0.2.9SummarizedExperiment1.34.0
SUMMER1.4.0suntools1.0.0
supclust1.1-1SuperLearner2.0-29
superml0.5.7superpc1.12
SuppDists1.1-9.8support.CEs0.7-0
surface0.6SurrogateRegression0.6.0.1
suRtex0.9survcomp1.54.0
surveillance1.23.1survey4.4-2
surveybootstrap0.0.3surveydata0.2.7
surveyplanning4.0surveysd1.3.1
survivalROC1.0.3.1survminer0.4.9
survMisc0.5.6survPresmooth1.1-11
sva3.52.0svars1.3.11
svd0.5.6svDialogs1.1.0
SVDNF0.1.9svglite2.1.3
svGUI1.0.1svrep0.6.4
svs3.1.1svUnit1.0.6
swagger5.17.14.1sweep0.2.5
swephR0.3.1SwimmeR0.14.2
swirl2.4.5swirlify0.5.3
switchr0.14.8SWTools1.0.3
sylly0.1-6sym.arma1.0
symengine0.2.6symmoments1.2.1
synchronicity1.3.10SYNCSA1.3.4
Synth1.1-8synthACS1.7.1
synthesis1.2.5SynthETIC1.1.0
synthpop1.8-0sys3.4.2
sysfonts0.8.9systemfit1.1-30
systemfonts1.1.0table11.4.3
tables0.9.31tabnet0.6.0
tabuSearch1.1.1TAF4.2.0
tagcloud0.6TailRank3.2.2
TAM4.2-21tanaka0.4.0
TAQMNGR2018.5-1targets1.7.1
tau0.0-25taxize0.9.100.1
tbea1.5.0TBRDist1.0.2
tbrf0.1.5TCA1.2.1
TCGAbiolinks2.32.0TCGAbiolinksGUI.data1.24.0
TCGAretriever1.9.1TcGSA0.12.10
tcltk21.2-11Tcomp1.0.1
tdigest0.4.2TeachingDemos2.13
teamcolors0.0.4telegram.bot3.0.0
tempdisagg1.1.1tensor1.5
tensorA0.36.2.1tensorflow2.16.0
tensorMiss1.1.1TensorPreAve1.1.0
tensorTS1.0.2TEQR6.0-0
tergm4.2.0Ternary2.3.3
terra1.7-78terrainr0.7.5
TESS2.1.2tesseract5.2.1
testcorr0.2.0TestDataImputation2.3
TestDesign1.7.0tester0.2.0
TestFunctions0.2.2testit0.13
TestScorer1.7.2testthat3.2.1.1
TexExamRandomizer1.2.7texreg1.39.4
text2vec0.6.4textcat1.0-8
textir2.0-5textplot0.2.2
textrank0.3.1textreuse0.1.5
textshaping0.4.0textTinyR1.1.8
textutils0.4-1tfarima0.3.2
tfautograph0.3.2tfdatasets2.17.0
tfhub0.8.1tfio0.4.1
TFisher0.2.0tframe2015.12-1.1
tfruns1.5.3tgp2.4-23
TGS1.0.1TH.data1.1-2
theft0.6.1thief0.3
ThreeGroups0.21threejs0.3.3
ThreeWay1.1.3thurstonianIRT0.12.5
tibble3.2.1tibbletime0.1.8
tictoc1.2.1Tides2.1
tidyBdE0.3.7tidycensus1.6.5
tidychangepoint0.0.1tidyestimate1.1.1
tidygraph1.3.1tidyhydat0.6.1
tidyLPA1.1.0tidymodels1.2.0
tidyquant1.0.9tidyr1.3.1
tidyREDCap1.1.2tidyRSS2.0.7
tidyselect1.2.1tidySEM0.2.7
tidysynth0.2.0tidyterra0.6.1
tidytext0.4.2tidytree0.4.6
tidyverse2.0.0tidyvpc1.5.1
tiff0.1-12tigris2.1
tikzDevice0.12.6timechange0.3.0
timeDate4032.109timeSeries4041.110
timeseriesdb1.0.0-1.1.2timetk2.9.0
timsac1.3.8-4tinyarray2.4.2
tinyProject0.6.1tinytable0.4.0
tinytex0.53tis1.39
tkrplot0.0-27tkWidgets1.82.0
TLMoments0.7.5.3tm0.7-14
tm.plugin.alceste1.1.1tm.plugin.dc0.2-10
tm.plugin.europresse1.4tm.plugin.factiva1.8
tm.plugin.lexisnexis1.4.1tm.plugin.mail0.3-1
tmap3.3-4tmaptools3.1-1
TMB1.9.15Tmisc1.0.1
tmod0.50.13tmvnsim1.0-2
tmvtnorm1.6tnet3.0.16
tokenizers0.3.0tokenizers.bpe0.1.3
topicdoc0.1.1topicmodels0.2-17
topicmodels.etm0.1.0topmodel0.7.5
topologyGSA1.5.0toprdata1.0.2
torch0.13.0torchaudio0.3.1.9000
torchdatasets0.3.1torchvision0.6.0
tpr0.3-3tracerer2.2.3
trackdem0.7.2trackdf0.3.3
trackdown1.1.1trackeR1.6.0
trackeRapp1.2TrackReconstruction1.3
tractor.base3.4.2traipse0.3.0
trajectories0.2-9TrajectoryUtils1.12.0
trajr1.5.1transformr0.1.5
transfR1.0.11TransPhylo1.4.5
trapezoid2.0-2traudem1.0.3
tree1.0-43treebalance1.2.0
treebase0.1.5TreeBUGS1.5.0
treedater0.5.0TreeDist2.9.1
treefit1.0.2treeio1.28.0
treemap2.4-4TreeSearch1.5.1
TreeSim2.4treespace1.1.4.3
TreeTools1.12.0trend1.1.6
trendeval0.1.0trending0.1.0
TrialSize1.4triangle1.0
triebeard0.4.1trimcluster0.1-5
trip1.10.0tripack1.3-9.1
tripEstimation0.0-46TripleR1.5.4
TruncatedNormal2.3truncdist1.0-2
truncnorm1.0-9truncreg0.2-5
trust0.1-8trustOptim0.8.7.3
tryCatchLog1.3.1TSA1.3.1
TSANN0.1.0tsbox0.4.1
tsBSS1.0.0TSCAN1.42.0
TSclust1.3.1tscount1.4.3
tsdataleaks2.1.1tsdb1.1-0
tsdecomp0.2TSdeeplearning0.1.0
tsdisagg20.1.0TSdisaggregation2.0.0
TSdist3.7.1tsdistributions1.0.2
tsDyn11.0.4.1TSEAL0.1.3
TSEntropies0.9tseries0.10-57
tseriesChaos0.1-13.1tseriesEntropy0.7-2
tseriesTARMA0.3-4tsfeatures1.1.1
tsfknn0.6.0tsgarch1.0.2
tsgc0.0tsibble1.1.5
tsibbledata0.4.1tsibbletalk0.1.0
tsintermittent1.10tsiR0.4.3
TSLSTM0.1.0TSLSTMplus1.0.5
tsmethods1.0.1tsModel0.6-2
tsne0.1-3.1tsnet0.1.0
tsoutliers0.6-10TSP1.2-4
tsPI1.0.4TSrepr1.1.0
tsrobprep0.3.2tssim0.1.7
TSstudio0.1.7tstests1.0.0
TSTutorial1.2.7tsutils0.9.4
tswge2.1.0tth4.16-0
TTR0.24.4tufterhandout1.2.1
tune1.2.1TUWmodel1.1-1
tvm0.5.2twdtw1.0-1
tweedie2.3.5tweenr2.0.3
twosamples2.0.1TxDb.Hsapiens.UCSC.hg19.knownGene3.2.2
TxDb.Hsapiens.UCSC.hg38.knownGene3.18.0tximport1.32.0
txtq0.2.4tzdb0.4.0
uaparserjs0.3.5ubiquity2.0.3
ucminf1.2.2UComp5.0.4
UCSC.utils1.0.0udpipe0.8.11
ufRisk1.0.7ugatsdb0.2.3
uGMAR3.5.0umap0.2.10.0
uncmbb0.2.2unglue0.1.0
UnifiedDoseFinding0.1.10unifir0.2.4
units0.8-5univOutl0.4
unrepx1.0-2unrtf1.4.5
UpSetR1.4.0uptasticsearch0.4.0
urca1.3-4urlchecker1.0.1
urlshorteneR1.5.7urltools1.7.3
uroot2.1-3usdata0.3.1
usethis3.0.0usmap0.7.1
usmapdata0.3.0utf81.2.4
utility1.4.6uuid1.2-1
uwot0.2.2V85.0.0
VALERIE1.1.0validate1.1.5
validatetools0.5.2valr0.8.2
VAM1.1.0vapour0.10.0
VAR.etp1.1varbvs2.6-10
VARDetect0.1.8vardiag0.2-1
vardpoor0.20.1VaRES1.0.2
vars1.6-1VARshrink0.3.1
varycoef0.3.4VCA1.5.1
vcd1.4-13vcdExtra0.8-5
vcr1.6.0vctrs0.6.5
vdg1.2.3VedicDateTime0.1.9
vegan2.6-8vegawidget0.5.0
vegperiod0.4.0VennDiagram1.7.3
venneuler1.1-4VGAM1.1-12
VGAMdata1.1-12vglmer1.0.5
vhica0.2.8VIC50.2.6
VIM6.2.2VineCopula2.5.1
vines1.1.5vip0.4.1
viridis0.6.5viridisLite0.4.2
visNetwork2.1.2visualize4.5.0
vkR0.2volatilityTrader1.0.1
volcano3D2.0.9volleystat0.2.0
vpc1.2.2vroom1.6.5
vrtest1.2vsn3.72.0
W3CMarkupValidator0.1-7waiter0.2.5
waldo0.5.3warp0.2.1
washdata0.1.4WASP1.4.4
waterData1.0.8waterquality1.0.0
WaveletComp1.1wavelets0.3-0.2
waveslim1.8.5wavethresh4.7.3
wavScalogram1.1.3waywiser0.6.0
wbs1.4wbstats1.0.4
wCorr1.9.8WDI2.7.8
wdm0.2.4wdman0.2.6
weatherOz1.0.0WebAnalytics0.9.12
webchem1.3.0webdriver1.0.6
WebGestaltR0.4.6webmockr1.0.0
webreadr0.4.0webshot0.5.5
webshot20.1.1websocket1.4.2
webutils1.2.1wehoop2.1.0
WeightedPortTest1.1WeightIt1.3.0
weights1.0.4welo0.1.4
WeMix4.0.3WGCNA1.73
WH1.1.2whisker0.4.1
whitebox2.4.0whitening1.4.0
whoami1.3.0widgetframe0.3.1
widgetTools1.82.0WikidataQueryServiceR1.0.0
WikidataR2.3.3WikipediR1.7.1
wikitaxa0.4.0wildlifeDI1.0.0
wilson2.4.2windex2.0.8
wINEQ1.2.1withr3.0.1
wk0.9.3wktmo1.0.5
wkutils0.1.3wnl0.8.1
wooldridge1.4-3worcs0.1.15
word2vec0.4.0wordcloud2.6
wordnet0.1-17workflowr1.7.1
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worldfootballR0.6.2worldmet0.9.8
worrms0.4.3wpp20171.2-3
wpp20191.1-1wql1.0.1
WrightMap1.3writexl1.5.0
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wrswoR1.1.1WRTDStidal1.1.4
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XBRL0.99.19.1xfun0.47
xgboost1.7.8.1xgxr1.1.2
XLConnect1.1.0xlsx0.6.5
xlsxjars0.6.1XML3.99-0.17
xml21.3.6XML2R0.0.8
xmlrpc21.1xopen1.0.1
xplain0.2.2xpose0.4.18
xpose.nlmixr20.4.0xpose44.7.3
xslt1.4.5xtable1.8-4
xts0.14.0XVector0.44.0
xxIRT2.1.2yaImpute1.0-34
yaml2.3.10yardstick1.3.1
yesno0.1.3yhatr0.15.1
ympes1.5.0yorkr0.0.42
ypssc1.1.0yuima1.15.27
yulab.utils0.1.7zeallot0.1.0
zen4R0.10zic0.9.1
ZIM1.1.0ZINARp0.1.0
zip2.3.1zipfR0.6-70
zlib1.0.3zlibbioc1.50.0
zoo1.8-12ZRA0.2
ztable0.2.3zTree1.0.7
zyp0.11-1

Where to find the AMI?

Our JupyterHub Server AMI products can be found at AWS Marketplace.

Pricing

$0.10/hour charge for the AMI plus the cost charged for computing resources by AWS.

Set up JupyterHub Server on EC2

Default user: jhub-admin

Please sign up and set your password for jhub-admin when you start the server for the first time. Different from regular users, jhub-admin is automatically authorized to log in after the password is created.

http is supported out of box.

If https is desired, please send your request to support@elmcomputing.io

Startup page

After the EC2 instance is started, you can access the JupyterHub Server with its public IP address. For example, if the IP address is 10.11.12.13, typing http://10.11.12.13 in the browser will bring you to the following startup page:

main page

Sign-up page

When the JupyterHub Server is activated, a default user "jhub-admin" is created. The first time you access the server, a password need to be set for "jhub-admin".

main page

jupyterlab

main page

Authorize page

When creating new users, an authorization step is needed at "http://10.11.12.13/hub/authorize"

main page

Change password

The password can be changed at "http://10.11.12.13/hub/change-password"

main page

Python version: 3.10.12

Python packages

packageversionpackageversion
absl-py2.1.0aiobotocore2.15.0
aiofiles23.2.1aiohappyeyeballs2.4.0
aiohttp3.10.5aioitertools0.12.0
aiosignal1.3.1alembic1.13.2
altair5.4.1analytics-python1.2.9
aniso86019.0.1annotated-types0.7.0
anyio4.4.0appdirs1.4.4
argon2-cffi23.1.0argon2-cffi-bindings21.2.0
args0.1.0arrow1.3.0
arviz0.19.0asgiref3.8.1
asttokens2.4.1astunparse1.6.3
async-generator1.10async-lru2.0.4
async-property0.2.2async-timeout4.0.3
attrs24.2.0audioread3.0.1
autobahn24.4.2automat24.8.1
awscli1.34.16babel2.16.0
backcall0.2.0backoff2.2.1
backports-tarfile1.2.0bayesian-optimization1.5.1
bcrypt4.2.0beautifulsoup44.12.3
black24.8.0bleach6.1.0
blinker1.8.2blis0.7.11
bokeh3.5.2boruta0.4.3
botocore1.35.16branca0.7.2
brotli1.1.0brotlipy0.7.0
cachetools5.5.0catalogue2.0.10
catboost1.2.7certifi2024.8.30
certipy0.2.1cffi1.17.1
chainer7.8.1chardet5.2.0
charset-normalizer3.3.2click8.1.7
clint0.5.1cloudpathlib0.19.0
cloudpickle3.0.0cmdstanpy1.2.4
colorama0.4.6colorlog6.8.2
colorlover0.3.0comm0.2.2
confection0.1.5configobj5.0.8
constantly23.10.4contourpy1.3.0
coverage7.6.1cryptography43.0.1
cssselect1.2.0cufflinks0.17.3
cycler0.12.1cymem2.0.8
cython3.0.11dacite1.8.1
dash2.18.1dash-core-components2.0.0
dash-html-components2.0.0dash-renderer1.9.1
dash-table5.0.0dask2024.9.0
databricks-sdk0.32.1datascience0.17.6
deap1.4.1debugpy1.8.5
decorator5.1.1deepdiff8.0.1
defusedxml0.7.1deprecated1.2.14
deprecation2.1.0dill0.3.8
dipy1.9.0distributed2024.9.0
distro1.9.0distro-info1.0
django5.1.1dm-tree0.1.8
dmri-amico2.0.3dmri-commit2.3.0
dmri-dicelib1.1.2docker7.1.0
docutils0.16easyprocess1.1
ecdsa0.19.0eli50.13.0
entrypoint21.1entrypoints0.4
exceptiongroup1.2.2executing2.1.0
facets1.1.0fairlearn0.10.0
fastapi0.114.2fasteners0.19
fastjsonschema2.20.0fastprogress1.0.3
fastrlock0.8.2fasttext0.9.3
ffmpy0.4.0filelock3.16.0
flake87.1.1flask3.0.3
flask-cachebuster1.0.0flask-compress1.15
flask-cors5.0.0flask-login0.6.3
flatbuffers24.3.25folium0.17.0
fonttools4.53.1fqdn1.5.1
frozenlist1.4.1fsspec2024.9.0
funcy2.0future1.0.0
gast0.6.0gensim4.3.3
geopandas1.0.1gitdb4.0.11
gitpython3.1.43google-auth2.34.0
google-auth-oauthlib1.2.1google-pasta0.2.0
googlemaps4.10.0gradio4.44.0
gradio-client1.3.0graphene3.3
graphql-core3.2.4graphql-relay3.2.0
graphviz0.8.4greenlet3.1.0
grpcio1.66.1gunicorn23.0.0
h110.14.0h24.1.0
h5netcdf1.3.0h5py3.11.0
hdbscan0.8.38.post1headers-workaround0.18
heapdict1.0.1holidays0.57
hpack4.0.0html5lib1.1
htmlmin0.1.12httpcore1.0.5
httplib20.22.0httpx0.27.2
huggingface-hub0.24.7hyperframe6.0.1
hyperlink21.0.0hyperopt0.2.7
idna3.10imagehash4.3.1
imageio2.35.1imageio-ffmpeg0.5.1
imbalanced-learn0.12.3imblearn0.0
importlib-metadata8.5.0importlib-resources6.4.5
incremental24.7.2iniconfig2.0.0
ipykernel6.29.5ipython8.27.0
ipython-genutils0.2.0ipywidgets8.1.5
isoduration20.11.0isort5.13.2
itemadapter0.9.0itemloaders1.3.1
itsdangerous2.2.0jaraco-classes3.4.0
jaraco-context6.0.1jaraco-functools4.0.2
jedi0.19.1jeepney0.8.0
jinja23.1.4jmespath1.0.1
joblib1.4.2json50.9.25
jsonpatch1.33jsonpointer3.0.0
jsonschema4.23.0jsonschema-specifications2023.12.1
jupyter1.1.1jupyter-client8.6.2
jupyter-console6.6.3jupyter-core5.7.2
jupyter-events0.10.0jupyter-lsp2.2.5
jupyter-server2.14.2jupyter-server-proxy4.4.0
jupyter-server-terminals0.5.3jupyter-telemetry0.1.0
jupyterhub3.1.1jupyterhub-nativeauthenticator1.2.0
jupyterlab4.2.5jupyterlab-pygments0.3.0
jupyterlab-server2.27.3jupyterlab-vpython3.1.8
jupyterlab-widgets3.0.13jwcrypto1.5.6
keras3.5.0keras-preprocessing1.1.2
keras-tuner1.4.7keycloakauthenticator2.0.0
keyring25.3.0kiwisolver1.4.7
kmodes0.12.2kt-legacy1.0.5
langcodes3.4.0language-data1.2.0
launchpadlib2.0.0lazr-restfulclient0.14.6
lazr-uri1.0.6lazy-loader0.4
libclang18.1.1librosa0.10.2.post1
lightgbm4.5.0lime0.2.0.1
llvmlite0.43.0locket1.0.0
lucid0.3.8lxml5.3.0
mako1.3.5mamba0.11.3
marisa-trie1.2.0markdown3.7
markdown-it-py3.0.0markdown22.5.0
markupsafe2.1.5matplotlib3.9.2
matplotlib-inline0.1.7matplotlib-venn1.1.1
mccabe0.7.0mdurl0.1.2
mechanize0.4.10missingno0.5.2
mistune3.0.2ml-dtypes0.4.1
mlflow2.16.1mlflow-skinny2.16.1
mlpack4.3.0.post2mlxtend0.23.1
monotonic1.6more-itertools10.5.0
moviepy0.2.3.1mpi4py4.0.0
mpld30.5.10mpmath1.3.0
msgpack1.1.0mss9.0.2
multidict6.1.0multimethod1.12
murmurhash1.0.10mutagen1.47.0
mxnet1.9.1mypy-extensions1.0.0
namex0.0.8narwhals1.8.1
nbclient0.10.0nbconvert7.16.4
nbformat5.10.4nbgitpuller1.2.1
nest-asyncio1.6.0netifaces0.11.0
networkx3.3nibabel5.2.1
nilearn0.10.4nltk3.9.1
notebook7.2.2notebook-shim0.2.4
numba0.60.0numexpr2.10.1
numpy1.26.4nycflights130.0.3
oauthenticator17.0.0oauthlib3.2.2
onetimepass1.0.1opencv-python4.10.0.84
opentelemetry-api1.16.0opentelemetry-sdk1.16.0
opentelemetry-semantic-conventions0.37b0opt-einsum3.3.0
optree0.12.1optuna4.0.0
orderly-set5.2.2orjson3.10.7
outcome1.3.0.post0overrides7.7.0
packaging24.1pamela1.2.0
pandas2.2.2pandas-profiling3.6.6
pandocfilters1.5.1paramiko3.5.0
parsel1.9.1parso0.8.4
partd1.4.2pathlib-abc0.1.1
pathspec0.12.1pathy0.11.0
patsy0.5.6pbr6.1.0
pdfkit1.0.0pendulum3.0.0
pexpect4.9.0phik0.12.4
pickleshare0.7.5pillow10.4.0
pip24.2platformdirs4.3.3
plotly5.24.1pluggy1.5.0
pooch1.8.2preshed3.0.9
priority2.0.0proglog0.1.10
prometheus-client0.20.0prompt-toolkit3.0.47
prophet1.1.5protego0.3.1
protobuf4.25.4psutil6.0.0
ptyprocess0.7.0pure-eval0.2.3
py1.11.0py4j0.10.9.7
pyarrow17.0.0pyasn10.6.1
pyasn1-modules0.4.1pybind112.13.6
pycairo1.27.0pycaret2.2.2
pycodestyle2.12.1pycosat0.6.6
pycparser2.22pycryptodome3.20.0
pydantic2.9.1pydantic-core2.23.3
pydeck0.9.1pydispatcher2.0.7
pydot3.0.1pydotplus2.0.2
pydub0.25.1pyexpect1.0.22
pyflakes3.2.0pygame2.6.0
pyglet2.0.17pygments2.18.0
pygobject3.50.0pygresql6.0.1
pyjwt2.9.0pyldavis3.4.1
pymc33.11.4pynacl1.5.0
pynndescent0.5.13pyod2.0.2
pyogrio0.9.0pyopengl3.1.7
pyopenssl24.2.1pyparsing3.1.4
pyproj3.6.1pyquery2.0.1
pyrsistent0.20.0pyscreenshot3.1
pyserial3.5pysocks1.7.1
pyspark3.5.2pytest8.3.3
pytest-cov5.0.0python-dateutil2.9.0.post0
python-debian0.1.49python-jose3.3.0
python-json-logger2.0.7python-keycloak4.4.0
python-multipart0.0.9pytz2024.2
pytzdata2020.1pywavelets1.7.0
pyyaml6.0.2pyzmq26.2.0
qtconsole5.6.0qtpy2.4.1
queuelib1.7.0referencing0.35.1
regex2024.9.11requests2.32.3
requests-file2.1.0requests-oauthlib2.0.0
requests-toolbelt1.0.0requests-unixsocket0.3.0
resampy0.4.3retrying1.3.4
rfc3339-validator0.1.4rfc3986-validator0.1.1
rich13.8.1rpds-py0.20.0
rsa4.7.2ruamel-yaml0.18.6
ruamel-yaml-clib0.2.8ruff0.6.5
s3fs2024.9.0s3transfer0.10.2
safetensors0.4.5scikit-base0.9.0
scikit-image0.24.0scikit-learn1.5.2
scikit-plot0.3.7scipy1.13.1
scrape0.11.3scrapy2.11.2
seaborn0.13.2secretstorage3.3.3
selenium4.24.0semantic-version2.10.0
semver3.0.2send2trash1.8.3
service-identity24.1.0setuptools75.1.0
setuptools-scm8.1.0shap0.46.0
shapely2.0.6shellingham1.5.4
simpervisor1.0.0simplejson3.19.3
six1.16.0sktime0.33.0
slicer0.0.8smart-open6.4.0
smmap5.0.1sniffio1.3.1
sortedcontainers2.4.0sos0.25.1
soundfile0.12.1soupsieve2.6
soxr0.5.0.post1spacy3.7.6
spacy-legacy3.0.12spacy-loggers1.0.5
sqlalchemy2.0.35sqlparse0.5.1
srsly2.4.8ssh-import-id5.11
stack-data0.6.3stanio0.5.1
starlette0.38.5statsmodels0.14.3
stopit1.1.2streamlit1.38.0
sympy1.13.2tabulate0.9.0
tblib3.0.0tenacity8.5.0
tensorboard2.17.1tensorboard-data-server0.7.2
tensorboard-plugin-wit1.8.1tensorboardx2.6.2.2
tensorflow2.17.0tensorflow-io-gcs-filesystem0.37.1
tensorflow-probability0.24.0termcolor2.4.0
terminado0.18.1testpath0.6.0
testresources2.0.1textblob0.18.0.post0
theano1.0.5theano-pymc1.1.2
thinc8.2.5threadpoolctl3.5.0
tifffile2024.8.30time-machine2.15.0
tinycss21.3.0tldextract5.1.2
tokenizers0.19.1toml0.10.2
tomli2.0.1tomlkit0.12.0
toolz0.12.1torch2.4.1
tornado6.4.1tpot0.12.2
tqdm4.66.5traitlets5.14.3
transformers4.44.2trio0.26.2
trio-websocket0.11.1trx-python0.3
twisted24.7.0txaio23.1.1
typeguard4.3.0typer0.12.5
types-python-dateutil2.9.0.20240906typing-extensions4.12.2
tzdata2024.1umap-learn0.5.6
update-checker0.18.0uri-template1.3.0
urllib32.2.3uvicorn0.30.6
vega2.6.0vega-datasets0.9.0
visions0.7.6vpython7.6.5
w3lib2.2.1wadllib1.3.6
wasabi1.1.3watchdog4.0.2
wcwidth0.2.13weasel0.4.1
webcolors24.8.0webencodings0.5.1
websocket-client1.8.0websockets12.0
werkzeug3.0.4wheel0.44.0
widgetsnbextension4.0.13wordcloud1.9.3
wrapt1.16.0wsproto1.2.0
xarray2024.9.0xarray-einstats0.7.0
xgboost2.1.1xxhash3.5.0
xyzservices2024.9.0yarl1.11.1
ydata-profiling4.10.0yellowbrick1.5
zict3.0.0zipp3.20.2
zope-interface7.0.3zstandard0.23.0
packageversionpackageversion
absl-py0.15.0aiobotocore1.4.2
aiohttp3.7.4.post0aioitertools0.8.0
alembic1.7.4altair4.1.0
analytics-python1.4.0anyio3.3.4
appdirs1.4.4argon2-cffi21.1.0
args0.1.0astunparse1.6.3
async-generator1.10async-timeout3.0.1
atomicwrites1.1.5attrs19.3.0
audioread2.1.9autobahn21.3.1
Automat20.2.0awscli1.19.106
Babel2.9.1backcall0.2.0
backoff1.10.0bcrypt3.2.0
beautifulsoup44.10.0bleach4.1.0
blinker1.4blis0.7.5
bokeh2.4.1botocore1.20.106
branca0.5.0Brotli1.0.9
brotlipy0.7.0cachetools4.2.4
catalogue2.0.6certifi2019.11.28
certipy0.1.3cffi1.15.0
chainer7.8.0chardet3.0.4
click8.0.3clint0.5.1
cloud-init22.1cloudpickle2.0.0
colorama0.4.3command-not-found0.3
conda4.0.9configobj5.0.6
constantly15.1.0coverage6.0.2
cryptography35.0.0cssselect1.1.0
cycler0.11.0cymem2.0.6
Cython0.29.24dash2.0.0
dash-core-components2.0.0dash-html-components2.0.0
dash-renderer1.9.1dash-table5.0.0
dask2021.10.0datascience0.17.2
dbus-python1.2.16debugpy1.5.1
decorator4.4.2defusedxml0.7.1
dipy1.4.1distributed2021.10.0
distro1.4.0distro-info=0.23ubuntu1
dmri-amico1.3.0dmri-commit1.5.0
docutils0.15.2EasyProcess0.3
ecdsa0.17.0eemeter3.1.0
eeweather0.3.24eli50.11.0
entrypoint20.2.4entrypoints0.3
et-xmlfile1.0.1fastrlock0.8
fasttext0.9.2ffmpy0.3.0
filelock3.3.2Flask2.0.2
Flask-CacheBuster1.0.0Flask-Compress1.10.1
Flask-Cors3.0.10Flask-Login0.5.0
flatbuffers2.0folium0.12.1.post1
fsspec2021.10.1future0.18.2
gast0.4.0gensim4.1.2
google-auth2.3.2google-auth-oauthlib0.4.6
google-pasta0.2.0googlemaps4.5.3
gradio2.4.1graphviz0.17
greenlet1.1.2grpcio1.41.1
h110.12.0h23.2.0
h5py3.5.0haversine2.5.1
HeapDict1.0.1hibagent1.0.1
hpack3.0.0html5lib1.1
httplib20.14.0hyperframe5.2.0
hyperlink21.0.0idna2.8
imageio2.10.1imageio-ffmpeg0.4.5
importlib-metadata1.5.0importlib-resources5.3.0
incremental21.3.0iniconfig1.1.1
ipykernel6.4.2ipython7.29.0
ipython-genutils0.2.0ipywidgets7.6.5
itemadapter0.4.0itemloaders1.0.4
itsdangerous2.0.1jdcal1.0
jedi0.18.0jeepney0.7.1
Jinja23.0.2jmespath0.10.0
joblib1.1.0json50.9.6
jsonpatch1.22jsonpointer2.0
jsonschema3.2.0jupyter1.0.0
jupyter-client7.0.6jupyter-console6.4.0
jupyter-core4.9.1jupyter-server1.11.1
jupyter-server-proxy3.1.0jupyter-telemetry0.1.0
jupyterhub1.4.2jupyterhub-nativeauthenticator1.0.5
jupyterlab3.2.3jupyterlab-pygments0.1.2
jupyterlab-server2.8.2jupyterlab-widgets1.0.2
keras2.7.0Keras-Preprocessing1.1.2
keycloakauthenticator2.0.0keyring18.0.1
kiwisolver1.3.2language-selector0.1
launchpadlib1.10.13lazr.restfulclient0.14.2
lazr.uri1.0.3libclang12.0.0
librosa0.8.1lightgbm3.3.1
llvmlite0.38.1locket0.2.1
lxml4.6.3Mako1.1.5
mamba0.11.2Markdown3.3.4
markdown22.4.1MarkupSafe2.0.1
matplotlib3.4.3matplotlib-inline0.1.3
mechanize0.4.7mistune0.8.4
mlpack3.2.2monotonic1.6
more-itertools4.2.0moviepy1.0.3
mpi4py3.1.1msgpack1.0.2
mss6.1.0multidict5.2.0
murmurhash1.0.6mutagen1.45.1
nbclassic0.3.4nbclient0.5.4
nbconvert6.2.0nbformat5.1.3
nbgitpuller1.0.2nest-asyncio1.5.1
netifaces0.10.4networkx2.6.3
nibabel3.2.1nltk3.6.5
notebook6.4.5numba0.55.1
numexpr2.7.1numpy1.20.3
nycflights130.0.3oauthenticator14.2.0
oauthlib3.1.0olefile0.46
onetimepass1.0.1opencv-python4.5.4.58
openpyxl3.0.3opt-einsum3.3.0
outcome1.1.0packaging21.2
pamela1.0.0pandas1.3.4
pandocfilters1.5.0paramiko2.8.0
parsel1.6.0parso0.8.2
partd1.2.0pathy0.6.1
patsy0.5.2pbr5.6.0
pdfkit0.6.1pendulum2.1.2
pexpect4.6.0pickleshare0.7.5
Pillow8.4.0plotly5.3.1
pluggy1.0.0pooch1.5.2
preshed3.0.6priority1.3.0
proglog0.1.9prometheus-client0.12.0
prompt-toolkit3.0.21Protego0.1.16
protobuf3.19.1psutil5.8.0
ptyprocess0.7.0py1.10.0
py4j0.10.9.2pyarrow6.0.0
pyasn10.4.8pyasn1-modules0.2.8
pybind112.8.1pycairo1.20.1
pycosat0.6.3pycparser2.20
pycryptodome3.11.0pycurl7.45.1
pydantic1.8.2PyDispatcher2.0.5
pydot1.4.2pydub0.25.1
pyexpect1.0.21pygame2.0.2
pyglet1.5.21Pygments2.10.0
PyGObject3.36.0PyGreSQL5.2.2
PyHamcrest1.9.0PyJWT2.3.0
pymacaroons0.13.0PyNaCl1.4.0
pyOpenSSL19.0.0pyparsing2.4.7
pyproj3.3.1pyquery1.4.3
pyrsistent0.15.5pyscreenshot3.0
pyserial3.4PySocks1.7.1
pyspark3.2.0pytest6.2.5
python-apt2.0.0+ubuntu0.20.4.7python-dateutil2.8.2
python-debian=0.1.36ubuntu1python-jose3.3.0
python-json-logger2.0.2python-keycloak0.26.1
python-spams2.6.1.11pytz2021.3
pytzdata2020.1PyWavelets1.1.1
PyYAML5.2pyzmq22.3.0
qtconsole5.1.1QtPy1.11.2
queuelib1.6.2regex2021.10.23
requests2.22.0requests-file1.5.1
requests-oauthlib1.3.0requests-unixsocket0.2.0
resampy0.2.2retrying1.3.3
rsa3.4.2ruamel.yaml0.17.16
ruamel.yaml.clib0.2.6s3fs2021.10.1
s3transfer0.4.2scikit-image0.18.3
scikit-learn1.0.1scipy1.7.1
scrape0.11.1Scrapy2.5.1
seaborn0.11.2SecretStorage2.3.1
selenium4.0.0Send2Trash1.8.0
service-identity21.1.0Shapely1.8.2
simpervisor0.4simplejson3.16.0
six1.14.0smart-open5.2.1
sndfile0.2.0sniffio1.2.0
sortedcontainers2.4.0sos4.3
SoundFile0.10.3.post1soupsieve2.2.1
spacy3.1.4spacy-legacy3.0.8
SQLAlchemy1.4.26srsly2.4.2
ssh-import-id5.10statsmodels0.13.0
systemd-python234tables3.6.1
tabulate0.8.9tblib1.7.0
tenacity8.0.1tensorboard2.7.0
tensorboard-data-server0.6.1tensorboard-plugin-wit1.8.0
tensorboardX2.4termcolor1.1.0
terminado0.12.1testpath0.5.0
testresources2.0.1Theano1.0.5
thinc8.0.12threadpoolctl3.0.0
tifffile2021.10.12tldextract3.1.2
toml0.10.2toolz0.11.1
torch1.10.0torchaudio0.11.0
torchvision0.12.0tornado6.1
tqdm4.62.3traitlets5.1.1
trio0.19.0trio-websocket0.9.2
Twisted21.7.0txaio21.2.1
typer0.4.0typing-extensions3.10.0.2
ubuntu-advantage-tools27.7ufw0.36
unattended-upgrades0.1urllib31.26.7
vega-datasets0.9.0vpython7.6.2
w3lib1.22.0wadllib1.3.3
wasabi0.8.2wcwidth0.2.5
webencodings0.5.1websocket-client1.2.1
Werkzeug2.0.2widgetsnbextension3.5.2
wrapt1.13.3wsproto1.0.0
xgboost1.5.0xlrd1.1.0
xlwt1.3.0yarl1.7.0
zict2.0.0zipp3.6.0
zope.interface5.4.0

After the virtual machine is started, you can access the RStudio Server with its public IP address. For example, if the IP address is 10.11.12.13, typing http://10.11.12.13 in the browser will bring you to the following startup page:

main page

The default username is ruser and the password is the last 12 digits of the vmId. The vmId can be found in the JSON View with the form of 1f61b751-037a-489e-8638-3fc32fe6894d. Only the last 12 digits 3fc32fe6894d are used as the password.

Azure VM console

azure_json_view

JSON View

azure_rstudio_password

RStudio Server

R: 4.4.1

rstudio-server: 2024.04.2-764

R packages (4310)

packageversionpackageversion
abc2.2.1abc.data1.1
ABCoptim0.15.0abcrf1.9
abglasso0.1.1abind1.4-8
abtest1.0.1accrualPlot1.0.7
acebayes1.10acepack1.4.2
ACNE0.9.1acnr1.0.0
acp2.1acs2.1.4
ACSWR1.0ActivePathways2.0.5
actuar3.3-4actuaRE0.1.5
ActuarialM0.1.0actuaryr1.1.1
actxps1.5.0ada2.0-5
adagio0.9.2adaptivetau2.3-1
adaptMCMC1.5adaptr1.4.0
ADAPTS1.0.22adaptsmoFMRI1.2
adaptTest1.2additivityTests1.1-4.2
ade41.7-22ade4TkGUI0.3-1
adegenet2.1.10adegraphics1.0-21
adehabitatHR0.4.22adehabitatHS0.3.18
adehabitatLT0.3.28adehabitatMA0.3.17
adephylo1.1-16adespatial0.3-24
ADGofTest0.3adimpro0.9.7.2
adiv2.2.1adjclust0.6.10
adlift1.4-5admisc0.36
AdMit2.1.9ads1.5-10
AdvancedBasketballStats1.0.1AER1.2-14
affy1.82.0affyio1.74.0
africamonitor0.2.4agricolae1.3-7
agricolaeplotr0.5.0agridat1.23
agriwater1.0.2agvgd0.1.2
AhoCorasickTrie0.1.2aion1.1.0
airGR1.7.6airGRdatasets0.2.1
airGRdatassim0.1.3airGRiwrm0.7.0
airGRteaching0.3.3airports0.1.0
airr1.5.0ajv1.0.0
akima0.6-3.4alabama2023.1.0
alakazam1.3.0aLFQ1.3.6
AlgDesign1.2.1.1aliases2entrez0.1.2
Allspice1.0.7almanac1.0.0
alpaca0.3.4alphavantager0.1.3
altair4.2.3ALTopt0.1.2
Amelia1.8.2ammiBayes1.0-2
ampir1.1.0AMR2.1.1
anabel3.0.1AnaCoDa0.1.4.4
anacor1.1-4analogsea1.0.7.2
analogue0.17-7anesrake0.80
animation2.7anipaths0.10.3
anMC0.2.5annotate1.82.0
AnnotationBustR1.3.0AnnotationDbi1.66.0
AnnuityRIR1.0-0Anthropometry1.19
anytime0.3.9ao1.1.0
aod1.3.3aoos0.5.0
AovBay0.1.0apc2.0.0
apcluster1.4.13ape5.8
apex1.0.6APFr1.0.2
aphid1.3.5aphylo0.3-3
apisensr1.0.0aplot0.2.3
apollo0.3.4approximator1.2-8
apsimx2.8.0apt4.0
ARCensReg3.0.1archetypes2.2-0.1
archive1.1.9archivist2.3.8
ArDec2.1-1ARDL0.2.4
ardl.nardl1.3.0areal0.1.8
arfima1.8-1argo3.0.2
argparse2.2.3arima23.3.0
arkhe1.7.0arm1.14-4
aroma.affymetrix3.2.2aroma.apd0.7.0
aroma.cn1.7.1aroma.core3.3.1
aroma.light3.34.0arpr0.1.2
arrangements1.1.9arrow17.0.0.1
ars0.8arsenal3.6.3
aRxiv0.10ascii2.6
asd2.2ash1.0-15
ashr2.2-63AsioHeaders1.22.1-2
askpass1.2.1aspect1.0-6
ASSA2.0assertthat0.2.1
AssetCorr1.0.4astsa2.1
asymmetry2.0.4ata1.1.1
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TGS1.0.1TH.data1.1-2
theft0.6.3thief0.3
ThreeGroups0.21threejs0.3.3
ThreeWay1.1.3thurstonianIRT0.12.5
tibble3.2.1tibbletime0.1.8
tictoc1.2.1Tides2.1
tidyBdE0.3.7tidycensus1.6.6
tidychangepoint0.0.1tidyestimate1.1.1
tidygraph1.3.1tidyhydat0.7.0
tidyLPA1.1.0tidymodels1.2.0
tidyquant1.0.9tidyr1.3.1
tidyREDCap1.1.2tidyRSS2.0.7
tidyselect1.2.1tidySEM0.2.7
tidysynth0.2.0tidyterra0.6.1
tidytext0.4.2tidytree0.4.6
tidyverse2.0.0tidyvpc1.5.1
tiff0.1-12tigris2.1
tikzDevice0.12.6timechange0.3.0
timeDate4041.110timeSeries4041.111
timeseriesdb1.0.0-1.1.2timetk2.9.0
timsac1.3.8-4tinyarray2.4.2
tinyProject0.6.1tinytable0.5.0
tinytex0.53tis1.39
tkrplot0.0-27tkWidgets1.82.0
TLMoments0.7.5.3tm0.7-14
tm.plugin.alceste1.1.1tm.plugin.dc0.2-10
tm.plugin.europresse1.4tm.plugin.factiva1.8
tm.plugin.lexisnexis1.4.1tmap3.3-4
tmaptools3.1-1TMB1.9.15
Tmisc1.0.1tmod0.50.13
tmvnsim1.0-2tmvtnorm1.6
tnet3.0.16tokenizers0.3.0
tokenizers.bpe0.1.3topicdoc0.1.1
topicmodels0.2-17topicmodels.etm0.1.0
topmodel0.7.5topologyGSA1.5.0
toprdata1.0.2torch0.13.0
torchaudio0.3.1.9000torchdatasets0.3.1
torchvision0.6.0tpr0.3-3
tracerer2.2.3trackdem0.7.2
trackdf0.3.3trackdown1.1.1
trackeR1.6.0trackeRapp1.2
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traipse0.3.0trajectories0.2-9
TrajectoryUtils1.12.0trajr1.5.1
transformr0.1.5transfR1.0.11
TransPhylo1.4.5trapezoid2.0-2
traudem1.0.3tree1.0-43
treebalance1.2.0treebase0.1.5
TreeBUGS1.5.0treedater0.5.0
TreeDist2.9.1treefit1.0.2
treeio1.28.0treemap2.4-4
TreeSearch1.5.1TreeSim2.4
treespace1.1.4.3TreeTools1.12.0
trend1.1.6trendeval0.1.0
trending0.1.0TrialSize1.4
triangle1.0triebeard0.4.1
trimcluster0.1-5trip1.10.0
tripack1.3-9.1tripEstimation0.0-46
TripleR1.5.4TruncatedNormal2.3
truncdist1.0-2truncnorm1.0-9
truncreg0.2-5trust0.1-8
trustOptim0.8.7.3tryCatchLog1.3.1
TSA1.3.1TSANN0.1.0
tsbox0.4.1tsBSS1.0.0
TSCAN1.42.0TSclust1.3.1
tscount1.4.3tsdataleaks2.1.1
tsdb1.1-0tsdecomp0.2
TSdeeplearning0.1.0tsdisagg20.1.0
TSdisaggregation2.0.0TSdist3.7.1
tsdistributions1.0.2tsDyn11.0.4.1
TSEAL0.1.3TSEntropies0.9
tseries0.10-58tseriesChaos0.1-13.1
tseriesEntropy0.7-2tseriesTARMA0.5-1
tsfeatures1.1.1tsfknn0.6.0
tsgarch1.0.2tsgc0.0
tsibble1.1.5tsibbledata0.4.1
tsibbletalk0.1.0tsintermittent1.10
tsiR0.4.3TSLSTM0.1.0
TSLSTMplus1.0.5tsmethods1.0.2
tsModel0.6-2tsne0.1-3.1
tsnet0.1.0tsoutliers0.6-10
TSP1.2-4tsPI1.0.4
TSrepr1.1.0tsrobprep0.3.2
tssim0.1.7TSstudio0.1.7
tstests1.0.0TSTutorial1.2.7
tsutils0.9.4tswge2.1.0
tth4.16-0TTR0.24.4
tufterhandout1.2.1tune1.2.1
TUWmodel1.1-1tvm0.5.2
twdtw1.0-1tweedie2.3.5
tweenr2.0.3twosamples2.0.1
TxDb.Hsapiens.UCSC.hg19.knownGene3.2.2TxDb.Hsapiens.UCSC.hg38.knownGene3.18.0
tximport1.32.0txtq0.2.4
tzdb0.4.0uaparserjs0.3.5
ubiquity2.0.3ucminf1.2.2
UComp5.0.4UCSC.utils1.0.0
udpipe0.8.11ufRisk1.0.7
ugatsdb0.2.3uGMAR3.5.0
umap0.2.10.0uncmbb0.2.2
unglue0.1.0UnifiedDoseFinding0.1.10
unifir0.2.4units0.8-5
univOutl0.4unrepx1.0-2
unrtf1.4.6UpSetR1.4.0
uptasticsearch0.4.0urca1.3-4
urlchecker1.0.1urlshorteneR1.5.7
urltools1.7.3uroot2.1-3
usdata0.3.1usethis3.0.0
usmap0.7.1usmapdata0.3.0
utf81.2.4utility1.4.6
uuid1.2-1uwot0.2.2
V85.0.1VALERIE1.1.0
validate1.1.5validatetools0.5.2
valr0.8.2VAM1.1.0
vapour0.10.0VAR.etp1.1
varbvs2.6-10VARDetect0.1.8
vardiag0.2-1vardpoor0.20.1
VaRES1.0.2vars1.6-1
VARshrink0.3.1varycoef0.3.4
VCA1.5.1vcd1.4-13
vcdExtra0.8-5vcr1.6.0
vctrs0.6.5vdg1.2.3
VedicDateTime0.1.9vegan2.6-8
vegawidget0.5.0vegperiod0.4.0
VennDiagram1.7.3venneuler1.1-4
VGAM1.1-12VGAMdata1.1-12
vglmer1.0.5vhica0.2.8
VIC50.2.6VIM6.2.2
VineCopula2.5.1vines1.1.5
vip0.4.1viridis0.6.5
viridisLite0.4.2visNetwork2.1.2
visualize4.5.0vkR0.2
volatilityTrader1.0.1volcano3D2.0.9
volleystat0.2.0vpc1.2.2
vroom1.6.5vrtest1.2
vsn3.72.0W3CMarkupValidator0.1-7
waiter0.2.5waldo0.5.3
warp0.2.1washdata0.1.4
WASP1.4.4waterData1.0.8
waterquality1.0.0WaveletComp1.1
wavelets0.3-0.2waveslim1.8.5
wavethresh4.7.3wavScalogram1.1.3
waywiser0.6.0wbs1.4
wbstats1.0.4wCorr1.9.8
WDI2.7.8wdm0.2.4
wdman0.2.6weatherOz1.0.0
WebAnalytics0.9.12webchem1.3.0
webdriver1.0.6WebGestaltR0.4.6
webmockr1.0.0webreadr0.4.0
webshot0.5.5webshot20.1.1
websocket1.4.2webutils1.2.2
wehoop2.1.0WeightedPortTest1.1
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welo0.1.4WeMix4.0.3
WGCNA1.73WH1.1.2
whisker0.4.1whitebox2.4.0
whitening1.4.0whoami1.3.0
widgetframe0.3.1widgetTools1.82.0
WikidataQueryServiceR1.0.0WikidataR2.3.3
WikipediR1.7.1wikitaxa0.4.0
wildlifeDI1.0.0wilson2.4.2
windex2.0.8wINEQ1.2.1
withr3.0.1wk0.9.3
wktmo1.0.5wkutils0.1.3
wnl0.8.1wooldridge1.4-3
worcs0.1.15word2vec0.4.0
wordcloud2.6wordnet0.1-17
workflowr1.7.1workflows1.1.4
workflowsets1.1.0worldfootballR0.6.2
worldmet0.9.8worrms0.4.3
wpp20171.2-3wpp20191.1-1
wql1.0.1WrightMap1.4
writexl1.5.1WriteXLS6.7.0
wrMisc1.15.2wrProteo1.12.0
WRSS3.1wrswoR1.1.1
WRTDStidal1.1.4WufooR1.0.1
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xaringan0.30XBRL0.99.19.1
xfun0.48xgboost1.7.8.1
xgxr1.1.2XLConnect1.1.0
xlsx0.6.5xlsxjars0.6.1
XML3.99-0.17xml21.3.6
XML2R0.0.8xmlrpc21.1
xopen1.0.1xplain0.2.2
xpose0.4.18xpose.nlmixr20.4.0
xpose44.7.3xslt1.4.6
xtable1.8-4xts0.14.0
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yaImpute1.0-34.1yaml2.3.10
yardstick1.3.1yesno0.1.3
yhatr0.15.1ympes1.5.0
yorkr0.0.42ypssc1.1.0
yuima1.15.27yulab.utils0.1.7
zeallot0.1.0zen4R0.10
zic0.9.1ZIM1.1.0
ZINARp0.1.0zip2.3.1
zipfR0.6-70zlib1.0.3
zlibbioc1.50.0zoo1.8-12
ZRA0.2ztable0.2.3
zTree1.0.7zyp0.11-1

RStudio Server

R: 4.3.1

rstudio-server: 2023.06.2+561

R packages (2906)

packageversionpackageversion
abc2.2.1abc.data1.0
abcrf1.9abglasso0.1.1
abind1.4-5abtest1.0.1
accrualPlot1.0.7acebayes1.10
acepack1.4.2acp2.1
acs2.1.4ACSWR1.0
actuar3.3-2ada2.0-5
adagio0.8.5adaptivetau2.2-3
adaptMCMC1.4adaptr1.3.2
adaptsmoFMRI1.2adaptTest1.1
ade41.7-22ade4TkGUI0.3-1
adegenet2.1.10adegraphics1.0-18
adehabitatHR0.4.21adehabitatHS0.3.17
adehabitatLT0.3.27adehabitatMA0.3.16
ADGofTest0.3adimpro0.9.6
admisc0.33AdMit2.1.9
ads1.5-9AER1.2-10
affy1.78.2affyio1.70.0
africamonitor0.2.3agricolae1.3-6
agricolaeplotr0.3.1agridat1.22
aion1.0.1airports0.1.0
akima0.6-3.4alabama2023.1.0
AlgDesign1.2.1almanac1.0.0
alphavantager0.1.3ALTopt0.1.2
Amelia1.8.1AmericanCallOpt0.95
ammiBayes1.0-1AMR2.1.0
AnaCoDa0.1.4.4anacor1.1-4
anesrake0.80animation2.7
anipaths0.10.2AnnotationDbi1.62.2
anytime0.3.9aod1.3.2
aoos0.5.0AovBay0.1.0
ape5.7-1APFr1.0.2
aplot0.2.1approximator1.2-8
ARCensReg3.0.1ArchaeoChron0.1
ArchaeoPhases1.8ArDec2.1-1
ARDL0.2.4ardl.nardl1.2.3
areal0.1.8arfima1.8-1
argo3.0.2argparse2.2.2
arkhe1.3.0arm1.13-1
aroma.apd0.7.0arrangements1.1.9
arrow13.0.0.1ars0.6
ascii2.4asd2.2
ash1.0-15ashr2.2-63
askpass1.2.0aspect1.0-6
ASSA2.0assertthat0.2.1
AssetCorr1.0.4astsa2.0
asymmetry2.0.4ata1.1.1
aTSA3.1.2attempt0.3.1
attention0.3.0AUC0.3.2
audio0.1-11autoFRK1.4.3
autoimage2.2.3automap1.1-9
autostsm3.1.2av0.8.5
aweek1.0.3aws2.5-3
awsMethods1.1-1BACCO2.1-0
BACCT1.0backports1.4.1
backtest0.3-4baggr0.7.6
bain0.2.10BalancedSampling1.6.3
BaM1.0.3bama1.3.0
bamdit3.4.0bamlss1.2-1
bang1.0.2BANOVA1.2.1
BART2.9.4bartBMA1.0
bartCause1.0-6bartMachine1.3.4.1
bartMachineJARs1.2.1BAS1.6.4
basad0.3.0base642.0.1
base64enc0.1-3base64url1.4
basicMCMCplots0.2.7BaSkePro0.1.0
BASS1.3.1BatchExperiments1.4.3
BatchJobs1.9batchmeans1.0-4
baycn1.2.0bayefdr0.2.1
bayes4psy1.2.12bayesAB1.1.3
bayesammi0.1.0bayesanova1.5
BayesARIMAX0.1.1BayesBinMix1.4.1
bayesbio1.0.0bayesboot0.2.2
BayesBP1.1bayesbr0.0.1.0
BayesCACE1.2.3BayesCombo1.0
BayesComm0.1-2bayescopulareg0.1.3
bayescount0.9.99-8BayesCR2.1
bayesCT0.99.3BayesCTDesign0.6.1
BayesDA2012.04-1bayesDccGarch3.0.4
bayesdfa1.2.0bayesdistreg0.1.0
bayesDP1.3.6BayesFactor0.9.12-4.5
BayesFM0.1.5bayesforecast1.0.1
bayesGAM0.0.2bayesGARCH2.1.10
BayesGOF5.2BayesGPfit1.1.0
BayesGWQS0.1.1bayesian0.0.9
bayesianETAS1.0.3Bayesiangammareg0.1.0
BayesianGLasso0.2.0BayesianLaterality0.1.2
BayesianNetwork0.3BayesianTools0.1.8
bayesImageS0.6-1BayesLCA1.9
bayesLife5.2-0bayeslincom1.3.0
BayesLN0.2.8BayesLogit2.1
bayeslongitudinal0.1.0bayesm3.1-6
BayesMallows1.3.2BayesMassBal1.1.0
bayesmeta3.3bayesmix0.7-6
bayesnec2.1.1.0bayesplot1.10.0
bayesQR2.4bayesRecon0.1.2
bayestestR0.13.1bayesTFR7.4-0
BayesTools0.2.16BayesTree0.3-1.4
BayesVarSel2.2.5BayesX0.3-2
BAYSTAR0.2-10BB2019.10-1
BBmisc1.13BCBCSF1.0-1
BCC19970.1.1BCE2.2.0
Bchron4.7.6bcp4.0.3
bcpa1.3.2bcrm0.5.4
BDgraph2.72bdsmatrix1.3-6
BE0.2.4beadarray2.50.0
BeadDataPackR1.52.0bearishTrader1.0.2
beepr1.3beeswarm0.4.0
benchmarkme1.0.8benchmarkmeData1.0.4
BenfordTests1.2.0bentcableAR0.3.1
Bergm5.0.6Bernadette1.1.4
Bessel0.6-0BetaBit2.2
betafunctions1.8.1betareg3.1-4
betategarch3.3BETS0.4.9
bets.covid191.0.0beyondWhittle1.2.0
bezier1.1.2bfast1.6.1
BFpack1.2.2BGGM2.0.4
BGLR1.1.0BGVAR2.5.2
BH1.81.0-1BHH22016.05.31
BiasedUrn2.0.11bibtex0.5.1
bidask1.0.0BIFIEsurvey3.4-15
biganalytics1.1.21bigD0.2.0
biglm0.9-2.1bigmemory4.6.1
bigmemory.sri0.1.6bigrquery1.4.2
bigsplines1.1-1bigtime0.2.3
BigVAR1.1.2bindr0.1.1
bindrcpp0.2.2binom1.1-1.1
binr1.1.1binseqtest1.0.4
Biobase2.60.0BiocGenerics0.46.0
BiocManager1.30.22BiocParallel1.34.2
BiocVersion3.17.1bioinactivation1.2.3
biomformat1.28.0bioOED0.2.1
Biostrings2.68.1birtr1.0.0
bit4.0.5bit644.0.5
bitops1.0-7biwavelet0.20.21
bizdays1.0.13bkmr0.2.2
blaise1.3.10blastula0.3.4
blavaan0.5-2BLModel1.0.2
blob1.2.4blocklength0.1.5
blockrand1.5blocksdesign4.9
blockTools0.6.4BLR1.6
BMA3.18.17bmgarch2.0.0
bmixture1.7BMS0.3.5
BMTAR0.1.1bnlearn4.9
BNPTSclust2.0BNSP2.2.3
boa1.1.8-2boilerpipeR1.3.2
BOIN2.7.2bold1.3.0
Bolstad0.2-41Bolstad21.0-29
bondAnalyst1.0.1bookdown0.35
Boom0.9.11BoomSpikeSlab1.2.5
bootnet1.5.5BootPR1.0
bootstrap2019.6bootUR1.0.2
bqtl1.0-35BradleyTerry21.1-2
brainR1.6.0breakfast2.3
brew1.0-8brglm0.7.2
brglm20.9bridgesampling1.1-2
brio1.1.3brms2.20.4
Brobdingnag1.2-9broman0.80
broom1.0.5bsam1.1.3
bsamGP1.2.4bslib0.5.1
BsMD2023.920bspec1.6
bspmma0.1-2bssm2.0.1
BSSprep0.1bsts0.9.9
bsvars1.0.0BTLLasso0.1-11
BTM0.3.7bullishTrader1.0.1
bundesbank0.1-9BurStFin1.3
BurStMisc1.1BVAR1.0.4
bvartools0.2.3ca0.71.1
cabootcrs2.1.0cachem1.0.8
cacIRT1.4CADFtest0.3-3
caffsim0.2.2Cairo1.6-1
calculus1.0.1CalibrateSSB1.3.0
calibrator1.2-8callr3.7.3
cancensus0.5.6candisc0.8-6
CANSIM2R1.14.1car3.1-2
CARBayes6.0CARBayesdata3.0
CARBayesST3.3.1carData3.0-5
caret6.0-94carfima2.0.2
caribou1.1-1cartogram0.3.0
caTools1.18.2catR3.17
causact0.5.3CausalImpact1.3.0
CAvariants5.9cbsodataR0.5.1
cccp0.2-9cdlTools0.15
CDM8.2-6cds1.0.3
CellNOptR1.46.0cellranger1.1.0
censusapi0.8.0CFtime1.0.0
ChainLadder0.2.18chandwich1.1.6
changepoint2.2.4changepoint.geo1.0.2
changepoint.np1.0.5checkLuhn1.1.0
checkmate2.2.0cherryblossom0.1.0
chilemapas0.3.0chk0.9.0
choiceDes0.9-3cholera0.8.0
CholWishart1.1.2chron2.3-61
cifti0.4.5cinterpolate1.0.0
CircSpaceTime0.9.0CircStats0.2-6
circular0.5-0ciTools0.6.1
classInt0.4-10cli3.6.1
clime0.5.0clinDR2.4.1
clinfun1.1.3clinicalsignificance1.2.0
clinPK0.11.1clinsig1.2
clipr0.8.0clisymbols1.2.0
clock0.7.0clue0.3-65
clustDRM0.1-0clusterGeneration1.3.8
clusterPower0.7.0ClustVarLV2.1.1
clv0.3-2.4cmaes1.0-12
CMLS1.0-1cmm1.0
cmocean0.3-1cmprsk2.2-11
cmrutils1.3.1cNORM3.0.3
CNORode1.42.0coalescentMCMC0.4-4
coalitions0.6.24coarseDataTools0.6-6
cobalt4.5.1coconots1.1.3
cocor1.1-4cocorresp0.4-3
cocron1.0-1coda0.19-4
coin1.4-3cointReg0.2.0
collapse1.9.6collapsibleTree0.1.7
colorRamps2.3.1colorspace2.1-0
colourpicker1.3.0colourvalues0.3.9
combinat0.0-8CombinS1.1-1
CommonJavaJars1.0-6commonmark1.9.0
compare0.2-6CompQuadForm1.4.3
conditionz0.1.0conf.design2.0.0
config0.3.2conflicted1.2.0
conquer1.3.3conquestr1.0.7
contactdata1.0.0contfrac1.1-12
convey0.2.5cops1.3-1
copula1.1-2copulaData0.0-1
cordillera1.0-0coro1.0.3
corona0.3.0coronavirus0.4.1
corpcor1.6.10corpora0.6
corporaexplorer0.8.6corrgram1.14
corrplot0.92cosa2.1.0
costat2.4.1countrycode1.5.0
COVID193.0.3covid19.analytics2.1.3.1
covid19dbcand0.1.1covid19france0.1.0
covid19italy0.3.1covid19sf0.1.2
covid19swiss0.1.0covid19us0.1.9
CovidMutations0.1.3cowplot1.1.1
CPBayes1.1.0cplm0.7-11
cpp110.4.6crawl2.3.0
crayon1.5.2credentials2.0.1
credule0.1.4crfsuite0.4.2
CRM1.2.4crmPack1.0.3
crossdes1.1-2Crossover0.1-21
crosstalk1.2.0crs0.15-37
crseEventStudy1.2.2crsmeta0.3.0
crul1.4.0cSEM0.5.0
cshapes2.0csodata1.4.2
cstab0.2-2csv0.6.2
ctbi2.0.5ctmcmove1.2.9
ctmm1.2.0ctrdata1.15.2
CTT2.3.3CTTShiny0.1
ctv0.9-5cubature2.1.0
cubble0.3.0Cubist0.4.2.1
curl5.1.0cvar0.5
cvAUC1.1.4CVST0.2-3
CVXR1.0-11d3Network0.5.2.1
DAAG1.25.4dae3.2.19
daewr1.2-11dagitty0.3-1
DAKS2.1-3DALEX2.4.3
data.table1.14.8data.tree1.0.0
DatabaseConnector6.2.4DataExplorer0.8.2
datapasta3.1.0dataseries0.2.0
datawizard0.9.0date1.2-42
datetimeoffset0.3.1datetimeutils0.6-2
dbarts0.9-23DBI1.1.3
DBItest1.7.3dbmss2.8-2
dbparser2.0.1dbplyr2.3.4
dbscan1.1-11dbx0.2.8
DChaos0.1-7dclone2.3-2
DCluster0.2-9DClusterm1.0-1
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rappdirs0.3.3raster3.6-3
ratelimitr0.4.1rbenchmark1.0.0
rbibutils2.2.10Rcgmin2022-4.30
rcmdcheck1.4.0RColorBrewer1.1-3
Rcpp1.0.9RcppArmadillo0.11.4.2.1
RcppEigen0.3.3.9.3RcppParallel5.1.5
RcppProgress0.4.2RcppRoll0.3.0
Rcsdp0.1.57.2RCurl1.98-1.9
Rdpack2.4reactable0.3.0
reactR0.4.4readr2.1.3
readstata130.10.0readxl1.4.1
recipes1.0.3registry0.5-1
regress1.3-21relaxnet0.3-2
reliaR0.01relimp1.0-5
rematch1.0.1rematch22.1.2
remotes2.4.2rentrez1.2.3
renv0.16.0reprex2.0.2
reshape0.8.9reshape21.4.4
rex1.2.1rgl0.110.2
RgoogleMaps1.4.5.3RGraphics3.0-2
riingo0.3.1ritis1.0.0
rJava1.0-6RJDBC0.2-10
rjson0.2.21RJSONIO1.3-1.6
rlang1.0.6rlecuyer0.3-5
rmarkdown2.18Rmpfr0.8-9
rms6.3-0RMySQL0.10.24
rncl0.8.6robustbase0.95-0
ROCR1.0-11Rook1.2
rotl3.0.14roxygen27.2.2
RPostgreSQL0.7-4rprojroot2.0.3
rredlist0.7.1rsample1.1.0
RSQLite2.2.18rstan2.21.7
rstantools2.2.0rstudioapi0.14
RUnit0.4.32rversions2.1.2
rvest1.0.3Rvmmin2018-4.17.1
s21.1.1sandwich3.0-2
sass0.4.3scales1.2.1
scatterplot3d0.3-42ScottKnott1.3-0
SDMTools1.1-221.2sealasso0.1-3
segmented1.6-1selectr0.4-2
sem3.1-15SemiPar1.0-4.2
semTools0.5-6seqinr4.2-16
seriation1.4.0sessioninfo1.2.2
setRNG2022.4-1sets1.0-21
sf1.0-9sfsmisc1.1-13
shape1.4.6shapefiles0.7.2
shiny1.7.3shiny.semantic0.4.3
shinyjs2.1.0shinystan2.6.0
shinythemes1.2.0SimComp3.3
simsem0.5-16slam0.1-50
slider0.3.0sn2.1.0
sna2.7snakecase0.11.0
snow0.4-4snowfall1.84-6.2
solrium1.2.0sourcetools0.1.7
sp1.5-1spam2.9-1
SparseM1.81SpatialExtremes2.1-0
spatstat3.0-2spatstat.data3.0-0
spatstat.explore3.0-5spatstat.geom3.0-3
spatstat.linnet3.0-3spatstat.model3.0-2
spatstat.random3.0-1spatstat.sparse3.0-0
spatstat.utils3.0-1spData2.2.1
spdep1.2-7SQUAREM2021.1
ssgraph1.14stabs0.6-4
StanHeaders2.21.0-7statmod1.4.37
statnet.common4.7.0stringi1.7.8
stringr1.4.1strucchange1.5-3
styler1.8.1subplex1.8
superml0.5.6SuppDists1.1-9.7
survey4.1-1survPresmooth1.1-11
svUnit1.0.6sybil2.2.0
synbreedData1.5sys3.4.1
systemfonts1.0.4tables0.9.10
taxize0.9.100tensor1.5
tensorA0.36.2terra1.6-41
testit0.13testthat3.1.5
textshaping0.3.6TH.data1.1-1
threejs0.3.3tibble3.1.8
tidymodels1.0.0tidyquant1.0.6
tidyr1.2.1tidyselect1.2.0
tidyverse1.3.2timechange0.1.1
timeDate4021.106timeSeries4021.105
timetk2.8.2tinytex0.42
tis1.39tkrplot0.0-27
tmvtnorm1.5triebeard0.3.0
trimcluster0.1-5tripack1.3-9.1
truncnorm1.0-8truncreg0.2-5
tseries0.10-52tsfeatures1.1
TSP1.2-1TTR0.24.3
tune1.0.1tweenr2.0.2
tzdb0.3.0ucminf1.1-4.1
units0.8-0urca1.3-3
urlchecker1.0.1urltools1.7.3
usethis2.1.6utf81.2.2
uuid1.1-0V84.2.2
vcd1.4-10vctrs0.5.1
vegan2.6-4VGAM1.1-7
VGAMdata1.1-6viridis0.6.2
viridisLite0.4.1visNetwork2.1.2
vroom1.6.0waldo0.4.0
warp0.2.0waveslim1.8.4
wavethresh4.7.2webshot0.5.4
whisker0.4widenet0.1-2
WikidataQueryServiceR1.0.0WikidataR2.3.3
WikipediR1.5.0wikitaxa0.4.0
withr2.5.0wk0.7.0
workflows1.1.2workflowsets1.0.0
worrms0.4.2xfun0.35
xgboost1.6.0.1XLConnect1.0.6
xlsx0.6.5xlsxjars0.6.1
XML3.99-0.12xml21.3.3
xopen1.0.0xtable1.8-4
xts0.12.2yaml2.3.6
yardstick1.1.0zip2.2.2
zoo1.8-11

JupyterHub Server

JupyterHub is a multi-user server for Jupyter notebooks and allows multiple users to access Jupyter notebooks simultaneously through their web browsers, making it ideal for environments where multiple users need to collaborate or work independently on data science projects. It can be deployed on a single server for small teams or scaled up to handle large numbers of users.

main page

Set up JupyterHub Server

Default user: jhub-admin

Please sign up and set your password for jhub-admin when you start the server for the first time. Different from regular users, jhub-admin is automatically authorized to log in after the password is created.

http is supported out of box.

If https is desired, please send your request to support@elmcomputing.io

Startup page

After the VM is started, you can access the JupyterHub Server with its public IP address. For example, if the IP address is 10.11.12.13, typing http://10.11.12.13 in the browser will bring you to the following startup page:

main page

Sign-up page

When the JupyterHub Server is activated, a default user "jhub-admin" is created. The first time you access the server, a password need to be set for "jhub-admin".

main page

jupyterlab

main page

Authorize page

When creating new users, an authorization step is needed at "http://10.11.12.13/hub/authorize"

main page

Change password

The password can be changed at "http://10.11.12.13/hub/change-password"

main page

Release Notes

Added Python 3.10 and Sagemath; The data science packages such as tensorflow, torch, datascience, mlpack, mlflow and xgboost are installed.

SageMath: 9.0

Python version: 3.10

Python packages

packageversionpackageversion
absl-py1.0.0access1.1.8
adal1.2.7aenum3.1.11
affine2.3.1aiobotocore2.3.4
aioconsole0.5.1aiofiles22.1.0
aiohttp3.8.0aioitertools0.8.0
aiosignal1.2.0aiosqlite0.17.0
alabaster0.7.12alembic1.7.4
altair4.1.0amqp5.1.1
analytics-python1.4.0aniso86019.0.1
annotated-types0.6.0ansible6.4.0
ansible-base2.10.8ansible-core2.13.4
antlr4-python3-runtime4.11.1anyio3.4.0
apache-airflow2.3.4apache-airflow-providers-common-sql1.2.0
apache-airflow-providers-ftp3.1.0apache-airflow-providers-http4.0.0
apache-airflow-providers-imap3.0.0apache-airflow-providers-sqlite3.2.1
apache-libcloud2.8.0apispec3.3.2
appdirs1.4.4applicationinsights0.11.10
argcomplete2.0.0argon2-cffi21.1.0
argon2-cffi-bindings21.2.0args0.1.0
arrow1.2.3asgiref3.5.2
asn1crypto1.5.1astor0.8.1
astroid2.12.10asttokens2.0.5
astunparse1.6.3async-generator1.10
async-lru2.0.4async-timeout4.0.2
asynctest0.13.0atomicwrites1.4.1
attrs22.2.0audioread2.1.9
Authlib1.1.0autobahn21.3.1
autograd1.4Automat20.2.0
avro1.11.1avro-python31.10.2
aws-requests-auth0.4.3azure-common1.1.28
azure-core1.30.1azure-cosmos4.5.1
azure-cosmosdb-nspkg2.0.2azure-cosmosdb-table1.0.6
azure-datalake-store0.0.53azure-eventhub5.11.6
azure-graphrbac0.61.1azure-identity1.15.0
azure-keyvault4.2.0azure-keyvault-certificates4.8.0
azure-keyvault-keys4.9.0azure-keyvault-secrets4.8.0
azure-mgmt-authorization4.0.0azure-mgmt-containerregistry10.3.0
azure-mgmt-core1.4.0azure-mgmt-keyvault10.3.0
azure-mgmt-resource23.0.1azure-mgmt-storage21.1.0
azure-nspkg3.0.2azure-storage-blob12.19.0
azure-storage-common2.1.0azure-storage-file-datalake12.14.0
azure-storage-queue12.9.0Babel2.10.0
backcall0.2.0backoff1.10.0
backports.tempfile1.0backports.weakref1.0.post1
base64io1.0.3bcrypt3.2.0
beautifulsoup44.10.0beniget0.4.1
billiard4.0.2black22.8.0
bleach4.1.0blinker1.4
blis0.7.11bokeh2.4.1
boltons21.0.0boto2.49.0
boto31.21.0botocore1.24.21
Bottleneck1.3.5bqplot0.12.33
branca0.4.2brial1.0.2
Brotli1.0.9brotlipy0.7.0
bs40.0.1build0.8.0
bytecode0.13.0CacheControl0.12.11
cached-property1.5.2cachelib0.9.0
cachetools4.2.4cachy0.3.0
catalogue2.0.6cattrs22.1.0
certifi2019.11.28certipy0.1.3
cffi1.15.1cfgv3.3.1
chainer7.8.0chardet3.0.4
charset-normalizer2.0.12cleo1.0.0a5
click8.0.3click-didyoumean0.3.0
click-plugins1.1.1click-repl0.2.0
clickclick20.10.2cligj0.7.2
clikit0.6.2clint0.5.1
cloud-init23.4.4cloudpathlib0.16.0
cloudpickle2.0.0colorama0.4.3
coloredlogs15.0.1colorlog4.8.0
colour0.1.5comm0.2.1
command-not-found0.3commonmark0.9.1
confection0.1.4configobj5.0.6
configparser5.3.0confluent-kafka1.9.2
connexion2.14.1constantly15.1.0
constructs3.4.99contextily1.2.0
contextlib221.6.0convertdate2.4.0
countryinfo0.1.2coverage6.2
coveralls3.3.1cramjam2.5.0
crashtest0.3.1crcmod1.7
cron_descriptor1.2.31croniter1.3.7
cryptography3.4.8css-html-js-minify2.5.5
cssselect1.1.0cssutils2.5.1
curlify2.2.1cvxopt1.3.2
cx-Oracle8.3.0cycler0.11.0
cymem2.0.6cypari22.1.2
cysignals1.11.4Cython0.29.28
dacite1.8.1dash2.0.0
dash-core-components2.0.0dash-html-components2.0.0
dash-table5.0.0dash_renderer1.9.1
dask2023.3.2databricks-cli0.17.3
dataclasses0.6dataclasses-json0.5.7
datadog0.44.0dataprep0.4.4
datascience0.17.0datasets2.4.0
dateparser1.1.1DateTime4.7
db-dtypes1.0.3dbus-python1.2.16
ddsketch2.0.4ddtrace1.4.5
debugpy1.8.1decorator4.4.2
deepdiff5.8.1defer1.0.4
defusedxml0.7.1delta-spark2.0.0
Deprecated1.2.13deprecation2.1.0
descartes1.1.0dill0.3.2
dipy1.9.0distlib0.3.6
distributed2023.3.2distro1.4.0
distro-info1.0dm-tree0.1.8
dnspython2.2.1docker5.0.0
docopt0.6.2docutils0.15.2
dulwich0.20.46dynamo-json1.2.0
earthengine-api0.1.318EasyProcess0.3
ebaysdk2.2.0ecdsa0.17.0
ee_extra0.0.14eemeter3.1.0
eli50.11.0email-validator1.3.0
emoji2.1.0entrypoint20.2.4
entrypoints0.3enum341.1.10
esda2.4.1et-xmlfile1.1.0
etils0.8.0exceptiongroup1.0.0rc9
exchange-calendars4.2.3execnet1.9.0
executing0.8.3facebook-business14.0.0
facebook-sdk3.1.0facebook-wda1.4.6
Faker14.2.0fastavro1.6.1
fasteners0.17.3fastjsonschema2.16.1
fastnumbers3.2.1fastparquet0.8.3
fastrlock0.8fasttext0.9.2
ffmpeg-python0.2.0ffmpy0.3.0
filelock3.4.1Fiona1.8.21
fire0.4.0flake85.0.4
Flask2.1.3Flask-AppBuilder4.1.3
Flask-Babel2.0.0Flask-CacheBuster1.0.0
Flask-Caching2.1.0Flask-Compress1.14
Flask-Cors3.0.10Flask-JWT-Extended4.6.0
Flask-Login0.6.3Flask-Session0.4.1
Flask-SQLAlchemy2.5.1Flask-WTF0.15.1
flatbuffers24.3.7folium0.12.1.post1
fonttools4.34.4fpylll0.5.2.dev0
fqdn1.5.1freezegun1.2.2
frozenlist1.3.1fs2.4.12
fsspec2022.5.0funcsigs1.0.2
future0.18.2futures3.0.5
fuzzywuzzy0.18.0gast0.4.0
gcsfs2022.5.0GDAL3.4.1
gdown4.5.1gdspy1.6.12
geeadd0.5.5geemap0.16.2
gensim4.1.2geocoder1.38.1
geographiclib1.52geoip24.6.0
geojson2.5.0geopandas0.11.1
geopy2.2.0geotext0.4.0
gevent21.12.0giddy2.3.3
gitapi1.0.1gitdb4.0.9
GitPython3.1.27gmpy22.1.2
goflow0.1.2google-api-core2.17.1
google-api-python-client1.12.11google-auth2.28.2
google-auth-httplib20.1.0google-auth-oauthlib1.0.0
google-cloud-bigquery3.18.0google-cloud-bigquery-storage2.24.0
google-cloud-core2.4.1google-cloud-storage2.15.0
google-crc32c1.5.0google-pasta0.2.0
google-resumable-media2.7.0googleapis-common-protos1.62.0
gradio2.4.1graphviz0.17
great-expectations0.15.23greenlet1.1.2
gremlinpython3.6.1grpc-google-iam-v10.12.4
grpcio1.62.0grpcio-status1.41.0
grpcio-tools1.46.5gspread5.5.0
gunicorn20.1.0h110.12.0
h23.2.0h33.7.4
h5netcdf1.3.0h5py3.10.0
haversine2.6.0hdfs2.7.0
hdfs30.3.1HeapDict1.0.1
hgapi1.7.4hibagent1.0.1
hijri-converter2.2.4holidays0.16
hpack3.0.0html5lib1.1
htmlmin0.1.12httpcore0.13.7
httplib20.15.0httplib2shim0.0.3
httptools0.5.0httpx1.0.0b0
huggingface-hub0.9.1humanfriendly10.0
humanize4.3.0hvac2.1.0
hyperframe5.2.0hyperlink21.0.0
identify2.5.5idna2.8
ijson3.1.4ImageHash4.3.1
imageio2.10.1imageio-ffmpeg0.4.5
imagesize1.3.0importlib-metadata6.11.0
importlib-resources5.3.0incremental21.3.0
inequality1.0.0inflection0.5.1
iniconfig1.1.1invoke1.7.1
ipaddress1.0.23ipyevents2.0.1
ipyfilechooser0.6.0ipykernel6.29.2
ipyleaflet0.17.0ipysheet0.5.0
ipython7.29.0ipython_genutils0.2.0
ipytree0.2.1ipywidgets7.6.5
iso86011.0.2isodate0.6.1
isoduration20.11.0isort5.10.1
itemadapter0.4.0itemloaders1.0.4
itsdangerous2.0.1jarowinkler1.2.0
jax0.3.17jdcal1.4.1
jedi0.18.0jeepney0.7.1
Jinja23.0.3jira3.4.1
jmespath0.10.0joblib1.1.0
JPype11.4.0jschema-to-python1.2.3
jsii1.67.0json50.9.6
jsondiff2.0.0jsonlines1.2.0
jsonpatch1.22jsonpath-ng1.5.3
jsonpickle2.2.0jsonpointer2.0
jsonschema4.18.0jsonschema-specifications2023.12.1
junit-xml1.9jupyter1.0.0
jupyter-console6.6.3jupyter-events0.9.0
jupyter-lsp2.2.4jupyter-server1.24.0
jupyter-telemetry0.1.0jupyter-ydoc0.2.5
jupyter_client8.6.0jupyter_core5.7.1
jupyter_server_fileid0.9.1jupyter_server_proxy4.0.0
jupyter_server_terminals0.5.2jupyter_server_ydoc0.8.0
jupyterhub3.1.1jupyterhub-idle-culler1.3.1
jupyterhub-nativeauthenticator1.2.0jupyterlab3.6.7
jupyterlab_pygments0.3.0jupyterlab_server2.24.0
jupyterlab_widgets3.0.10jwcrypto1.4.2
jwt1.3.1kafka-python2.0.2
keplergl0.3.2keras2.15.0
Keras-Applications1.0.8Keras-Preprocessing1.1.2
keycloakauthenticator2.0.0keyring21.2.0
kiwisolver1.3.2knack0.10.0
kombu5.2.4korean-lunar-calendar0.3.1
kubernetes24.2.0langcodes3.3.0
laspy2.2.0launchpadlib1.10.13
lazr.restfulclient0.14.2lazr.uri1.0.3
lazy-object-proxy1.7.1lazy_loader0.3
leafmap0.10.3libclang13.0.0
libcst0.4.7libpysal4.6.2
librosa0.8.1lightgbm3.3.1
linkify-it-py2.0.0llvmlite0.39.0
locket1.0.0lockfile0.12.2
logzero1.7.0lorem0.1.1
lxml4.6.5lz43.1.3+dfsg
M2Crypto0.38.0macaroonbakery1.3.1
makefun1.15.0Mako1.1.5
mamba0.11.2mapclassify2.4.3
Markdown3.3.4markdown-it-py2.1.0
markdown22.4.1MarkupSafe2.0.1
marshmallow3.18.0marshmallow-enum1.5.1
marshmallow-oneofschema3.0.1marshmallow-sqlalchemy0.26.1
matplotlib3.5.2matplotlib-inline0.1.3
maxminddb2.2.0mccabe0.7.0
mdit-py-plugins0.3.0mdurl0.1.2
mechanize0.4.7meep1.0.6
memory-allocator0.1.2mercantile1.2.1
Metaphone0.6mgwr2.1.2
missingno0.5.1mistune3.0.2
ml-dtypes0.3.2mlflow2.7.1
mlpack4.3.0.post1mock4.0.3
momepy0.5.3monotonic1.6
more-itertools4.2.0moto4.0.3
moviepy1.0.3mpi4py3.1.1
mpmath1.2.1msal1.24.0
msal-extensions1.0.0msgpack1.0.2
msrest0.7.1msrestazure0.6.4
mss6.1.0multidict5.2.0
multimethod1.8multiprocess0.70.10
multitasking0.0.11munch2.5.0
murmurhash1.0.6mutagen1.45.1
mypy0.971mypy-extensions0.4.3
mysql-connector-python8.3.0mysqlclient2.1.1
namex0.0.7nbclassic0.3.4
nbclient0.5.4nbconvert7.16.1
nbformat5.9.2nbgitpuller1.0.2
nbsphinx0.8.8ndg-httpsclient0.5.1
nest-asyncio1.6.0netaddr0.8.0
netifaces0.10.4networkx2.8.5
nibabel5.2.1nlopt2.7.1
nltk3.7nodeenv1.7.0
nose1.3.7notebook6.4.12
notebook_shim0.2.4ntlm-auth1.1.0
numba0.56.4numpy1.23.5
nvidia-cublas-cu1212.1.3.1nvidia-cuda-cupti-cu1212.1.105
nvidia-cuda-nvrtc-cu1212.1.105nvidia-cuda-runtime-cu1212.1.105
nvidia-cudnn-cu128.9.2.26nvidia-cufft-cu1211.0.2.54
nvidia-curand-cu1210.3.2.106nvidia-cusolver-cu1211.4.5.107
nvidia-cusparse-cu1212.1.0.106nvidia-nccl-cu122.19.3
nvidia-nvjitlink-cu1212.4.99nvidia-nvtx-cu1212.1.105
nycflights130.0.3oauth2client4.1.3
oauthenticator14.2.0oauthlib3.1.0
ogr0.38.1olefile0.46
onetimepass1.0.1onnxruntime1.12.1
opencensus0.11.0opencensus-context0.1.3
opencensus-ext-azure1.1.7opencv-contrib-python4.6.0.66
opencv-python4.5.4.58openflow0.1.2.4
openpyxl3.0.10opensearch-py2.0.0
opt-einsum3.3.0ordered-set4.1.0
orjson3.8.0oscrypto1.3.0
osmnx1.2.0outcome1.1.0
overrides6.2.0packaging21.3
pamela1.0.0pandas1.5.3
pandas-gbq0.17.8pandas-market-calendars4.0
pandas-profiling3.6.6pandas-usaddress0.21
pandasql0.7.3pandocfilters1.5.0
paramiko2.8.0parsedatetime2.6
parsel1.6.0parso0.8.2
partd1.2.0pastel0.2.1
path.py12.0.1pathlib22.3.7.post1
pathlib_abc0.1.1pathos0.2.0
pathspec0.9.0pathy0.11.0
patsy0.5.2pbr5.6.0
pdfkit0.6.1pendulum2.1.2
pep5170.13.0pexpect4.8.0
pg80001.29.1phik0.12.2
phonenumbers8.12.55pickleshare0.7.5
pika1.3.0Pillow9.2.0
pip-tools6.8.0pipenv2022.9.8
pkgconfig1.5.1pkginfo1.8.3
pkgutil_resolve_name1.3.10platformdirs2.6.2
plotly5.19.0pluggy1.0.0
ply3.11Pmw2.1.1
poetry-core1.2.0pointpats2.2.0
pooch1.5.2portalocker2.5.1
postal-address22.4.22.1pox0.3.1
ppft1.7.6.5pplpy0.8.7
pprintpp0.4.0pre-commit2.20.0
premailer3.10.0preshed3.0.6
prettytable3.4.1primecountpy0.1.0
priority1.3.0prison0.2.1
probableparsing0.0.1proglog0.1.9
progressbar24.0.0prometheus-client0.12.0
prometheus-flask-exporter0.20.3promise2.3
prompt-toolkit3.0.30Protego0.1.16
proto-plus1.22.1protobuf3.20.3
protobuf3-to-dict0.1.5psutil5.8.0
psycopg22.9.3psycopg2-binary2.9.3
ptyprocess0.7.0publication0.0.3
PuLP2.6.0pure-eval0.2.2
py1.10.0py4j0.10.9.2
pyarrow6.0.0pyasn10.4.8
pyasn1-modules0.2.1pyathena2.14.0
pybind112.10.0pycairo1.20.1
pycodestyle2.9.1pycosat0.6.3
pycountry22.3.5pycountry-convert0.7.2
pycparser2.20pycron3.0.0
PyCRS1.0.2pycrypto2.6.1
pycryptodome3.11.0pycryptodomex3.15.0
pycups2.0.1pycurl7.45.1
pydantic1.10.14pydantic_core2.16.3
pydata-google-auth1.4.0pydeequ1.0.1
PyDispatcher2.0.5pydot1.4.2
pydotplus2.0.2pydub0.25.1
pyexpect1.0.21pyflakes2.5.0
pygame2.5.2pygdal3.4.1.10
pygeos0.12.0PyGithub1.55
pyglet1.5.21Pygments2.10.0
PyGObject3.42.1PyGreSQL5.2.2
PyHamcrest1.9.0pyhcl0.4.4
pyinotify0.9.6PyJWT2.5.0
pykerberos1.1.14pylev1.4.0
pylint2.15.2pyluach2.0.1
pymacaroons0.13.0PyMeeus0.5.11
pymongo3.12.3pymssql2.2.5
PyMySQL1.0.2PyNaCl1.4.0
pyodbc4.0.34pyOpenSSL19.0.0
pypandoc1.8.1pyparsing2.4.7
pyparted3.11.7PyPDF41.27.0
pyperclip1.8.2pypika-tortoise0.1.6
pypopulation2020.3pyproj3.3.1
pyquery1.4.3pyRFC33391.1
pyrsistent0.14.11pysal2.7.0
pyscreenshot3.0pyserial3.4
pysftp0.2.9pyshp2.3.1
pysndfile1.4.4PySocks1.7.1
pyspark3.2.0pystac1.6.1
pystac-client0.4.0pystache0.6.0
pytest6.2.5pytest-cov3.0.0
pytest-forked1.4.0pytest-mock3.8.2
pytest-runner6.0.0pytest-xdist2.5.0
python-apt2.4.0+ubuntu3python-box6.0.2
python-crfsuite0.9.8python-daemon2.3.1
python-dateutil2.8.2python-debian0.1.43+ubuntu1.1
python-distutils-extra2.39python-docx0.8.11
python-dotenv0.21.0python-editor1.0.4
python-gitlab3.8.0python-gnupg0.5.0
python-http-client3.3.7python-jose3.3.0
python-json-logger2.0.4python-jwt3.3.4
python-keycloak0.26.1python-Levenshtein0.12.2
python-magic0.4.27python-nvd30.15.0
python-slugify6.1.2python-stdnum1.17
python-twitter3.5python-utils3.3.3
python3-openid3.1.0pythran0.10.0
pytimeparse1.1.8pytz2021.3
pytz-deprecation-shim0.1.0.post0pytzdata2020.1
PyWavelets1.1.1pywinrm0.3.0
PyX0.15PyYAML5.4.1
pyzmq25.1.2qtconsole5.1.1
QtPy1.11.2quantecon0.5.3
querystring-parser1.2.4queuelib1.6.2
quilt35.0.0rapidfuzz2.4.2
rasterio1.3.0rasterstats0.17.0
ratelim0.1.6ratelimit2.2.1
readme-renderer37.1redis4.0.0
referencing0.33.0regex2021.11.10
reportlab3.6.11reportlib3.4.0
repoze.lru0.7requests2.28.2
requests-aws4auth1.1.2requests-file1.5.1
requests-futures1.0.0requests-kerberos0.12.0
requests-ntlm1.1.0requests-oauthlib1.3.0
requests-toolbelt0.9.1requests-unixsocket0.2.0
resampy0.2.2resolvelib0.8.1
responses0.18.0retry0.9.2
retrying1.3.3reverse_geocoder1.5
rfc3339-validator0.1.4rfc39861.5.0
rfc3986-validator0.1.1rich12.5.1
roman2.0.0rpds-py0.18.0
rpy23.2.6rsa3.4.2
Rtree1.0.0ruamel.yaml0.17.17
ruamel.yaml.clib0.2.6rvlib0.0.6
s3fs2022.5.0s3transfer0.5.2
sacremoses0.0.53sagemath-standard9.5
sagenb-export3.2sankee0.2.0
sarif-om1.0.4sasl0.3.1
scandir1.10.0schema0.7.5
scikit-image0.20.0scikit-learn1.1.3
scipy1.8.0scooby0.6.0
scp0.14.4scramp1.4.1
scrape0.11.1Scrapy2.5.1
seaborn0.12.2SecretStorage3.3.3
segregation2.3.1selenium3.9.0
selinux3.3semantic-version2.10.0
semver2.13.0Send2Trash1.8.0
sendgrid6.9.7sentencepiece0.1.97
sentry-sdk1.8.0service-identity21.1.0
setproctitle1.3.2setuptools-scm7.0.5
sh1.14.3shap0.41.0
Shapely1.8.2shellingham1.5.0
shortuuid1.0.9simpervisor0.4
simple-salesforce1.12.2simplegeneric0.8.1
simplejson3.16.0singledispatch3.7.0
six1.14.0sklearn0.0
sklearn-pandas2.2.0slack-sdk3.18.3
slackclient2.9.4slicer0.0.7
smart-open5.2.1smdebug-rulesconfig1.0.1
smmap5.0.0sniffio1.2.0
snowballstemmer2.2.0snowflake-connector-python2.7.11
snowflake-sqlalchemy1.4.1snuggs1.4.7
sortedcontainers2.4.0sos0.22.7
SoundFile0.10.3.post1soupsieve2.2.1
spacy3.7.1spacy-legacy3.0.12
spacy-loggers1.0.5spaghetti1.6.6
spams2.6.5.4spglm1.0.8
Sphinx4.5.0sphinxcontrib-applehelp1.0.2
sphinxcontrib-devhelp1.0.2sphinxcontrib-htmlhelp2.0.0
sphinxcontrib-jsmath1.0.1sphinxcontrib-qthelp1.0.3
sphinxcontrib-serializinghtml1.1.5spint1.0.7
splot1.1.5.post1spopt0.4.1
spreg1.2.4spvcm0.3.0
SQLAlchemy1.4.41SQLAlchemy-JSONField1.0.0
SQLAlchemy-Utils0.38.3sqlalchemy2-stubs0.0.2a24
sqlmodel0.0.6sqlparse0.4.2
srsly2.4.8ssh-import-id5.10
sshtunnel0.4.0stack-data0.5.0
starkbank-ecdsa2.0.3starlette0.20.4
statsd3.3.0statsmodels0.13.2
stevedore4.0.0stringcase1.2.0
structlog22.1.0swagger-ui-bundle0.0.9
sympy1.9systemd-python234
tabulate0.8.9tangled-up-in-unicode0.2.0
tblib1.7.0tenacity8.0.1
tensorboard2.15.2tensorboard-data-server0.7.2
tensorboard-plugin-wit1.8.0tensorboardX2.4
tensorflow2.15.1tensorflow-estimator2.15.0
tensorflow-hub0.16.1tensorflow-io-gcs-filesystem0.34.0
tensorflow-metadata1.14.0tensorflow-serving-api2.10.0
tensorflow-text2.15.0termcolor1.1.0
terminado0.12.1testpath0.5.0
testresources2.0.1text-unidecode1.3
tf-estimator-nightly2.16.0.dev2024012409tf-keras2.15.0
Theano1.0.5thinc8.2.3
threadpoolctl3.0.0thrift0.16.0
tifffile2021.10.12timer0.2.2
timezonefinder5.2.0tinycss21.1.1
tldextract3.1.2tobler0.9.0
tokenizers0.12.1toml0.10.2
tomli2.0.1tomlkit0.11.1
toolz0.11.1torch2.2.1
torchaudio2.2.1torchvision0.17.1
tornado6.2tortoise-orm0.19.2
tox3.26.0tqdm4.62.3
traitlets5.14.1traittypes0.2.1
transformers4.22.1trio0.19.0
trio-websocket0.9.2triton2.2.0
trx-python0.2.9Twisted21.7.0
txaio21.2.1typed-ast1.5.4
typeguard2.13.3typer0.4.0
types-cryptography3.3.23.2types-python-dateutil2.8.19.20240106
types-PyYAML6.0.11types-requests2.28.10
types-urllib31.26.24typing3.7.4.3
typing-inspect0.8.0typing_extensions4.8.0
tzdata2024.1tzlocal4.2
ua-parser0.16.1uamqp1.6.0
ubuntu-advantage-tools8001uc-micro-py1.0.1
ufoLib20.13.1ufw0.36.1
ujson5.5.0unattended-upgrades0.1
unicodecsv0.14.1unicodedata214.0.0
Unidecode1.3.4uri-template1.3.0
uritemplate3.0.1urllib31.25.11
usaddress0.5.10uvicorn0.18.3
uvloop0.17.0varname0.8.3
vcversioner2.16.0.0vega-datasets0.9.0
vine5.0.0virtualenv20.13.0+ds
virtualenv-clone0.5.7visions0.7.5
vpython7.6.2w3lib1.22.0
wadllib1.3.3WALinuxAgent2.2.46
wasabi1.1.2watchdog2.1.9
watchtower3.0.0watergrid1.1.1
Wave0.0.2wcwidth0.2.5
weasel0.3.4webcolors1.13
webencodings0.5.1websocket-client1.1.0
websockets10.3Werkzeug2.0.2
whitebox2.1.4whiteboxgui0.7.0
widgetsnbextension3.5.2wordcloud1.9.3
workdays1.4wrapt1.13.3
wsproto1.0.0WTForms2.3.3
xarray2022.6.0xgboost2.0.3
xlrd2.0.1XlsxWriter3.0.3
xlwt1.3.0xmltodict0.13.0
xxhash3.0.0xyzservices2022.6.0
y-py0.6.2yahoo-finance1.4.0
yarl1.7.0ydata-profiling4.1.2
yfinance0.1.74youtube-dl2021.12.17
youtube-search2.1.1youtube-search-python1.6.6
ypy-websocket0.8.4zeep4.1.0
zict3.0.0zipp3.6.0
zope.event4.5.0zope.interface5.4.0

After the virtual machine is started, you can access the RShiny Server with its public IP address. For example, if the IP address is 10.11.12.13, typing http://10.11.12.13 in the browser will bring you to the following startup page:

The RShiny applications are served from the directory /srv/shiny-server.

main page

RShiny Server

R: 4.4.1

rshiny-server: 1.5.22.1017

R packages (4310)

packageversionpackageversion
abc2.2.1abc.data1.1
ABCoptim0.15.0abcrf1.9
abglasso0.1.1abind1.4-8
abtest1.0.1accrualPlot1.0.7
acebayes1.10acepack1.4.2
ACNE0.9.1acnr1.0.0
acp2.1acs2.1.4
ACSWR1.0ActivePathways2.0.5
actuar3.3-4actuaRE0.1.5
ActuarialM0.1.0actuaryr1.1.1
actxps1.5.0ada2.0-5
adagio0.9.2adaptivetau2.3-1
adaptMCMC1.5adaptr1.4.0
ADAPTS1.0.22adaptsmoFMRI1.2
adaptTest1.2additivityTests1.1-4.2
ade41.7-22ade4TkGUI0.3-1
adegenet2.1.10adegraphics1.0-21
adehabitatHR0.4.22adehabitatHS0.3.18
adehabitatLT0.3.28adehabitatMA0.3.17
adephylo1.1-16adespatial0.3-24
ADGofTest0.3adimpro0.9.7.2
adiv2.2.1adjclust0.6.10
adlift1.4-5admisc0.36
AdMit2.1.9ads1.5-10
AdvancedBasketballStats1.0.1AER1.2-14
affy1.82.0affyio1.74.0
africamonitor0.2.4agricolae1.3-7
agricolaeplotr0.5.0agridat1.23
agriwater1.0.2agvgd0.1.2
AhoCorasickTrie0.1.2aion1.1.0
airGR1.7.6airGRdatasets0.2.1
airGRdatassim0.1.3airGRiwrm0.7.0
airGRteaching0.3.3airports0.1.0
airr1.5.0ajv1.0.0
akima0.6-3.4alabama2023.1.0
alakazam1.3.0aLFQ1.3.6
AlgDesign1.2.1.1aliases2entrez0.1.2
Allspice1.0.7almanac1.0.0
alpaca0.3.4alphavantager0.1.3
altair4.2.3ALTopt0.1.2
Amelia1.8.2ammiBayes1.0-2
ampir1.1.0AMR2.1.1
anabel3.0.1AnaCoDa0.1.4.4
anacor1.1-4analogsea1.0.7.2
analogue0.17-7anesrake0.80
animation2.7anipaths0.10.3
anMC0.2.5annotate1.82.0
AnnotationBustR1.3.0AnnotationDbi1.66.0
AnnuityRIR1.0-0Anthropometry1.19
anytime0.3.9ao1.1.0
aod1.3.3aoos0.5.0
AovBay0.1.0apc2.0.0
apcluster1.4.13ape5.8
apex1.0.6APFr1.0.2
aphid1.3.5aphylo0.3-3
apisensr1.0.0aplot0.2.3
apollo0.3.4approximator1.2-8
apsimx2.8.0apt4.0
ARCensReg3.0.1archetypes2.2-0.1
archive1.1.9archivist2.3.8
ArDec2.1-1ARDL0.2.4
ardl.nardl1.3.0areal0.1.8
arfima1.8-1argo3.0.2
argparse2.2.3arima23.3.0
arkhe1.7.0arm1.14-4
aroma.affymetrix3.2.2aroma.apd0.7.0
aroma.cn1.7.1aroma.core3.3.1
aroma.light3.34.0arpr0.1.2
arrangements1.1.9arrow17.0.0.1
ars0.8arsenal3.6.3
aRxiv0.10ascii2.6
asd2.2ash1.0-15
ashr2.2-63AsioHeaders1.22.1-2
askpass1.2.1aspect1.0-6
ASSA2.0assertthat0.2.1
AssetCorr1.0.4astsa2.1
asymmetry2.0.4ata1.1.1
atom4R0.3-3atRisk0.1.0
attempt0.3.1attention0.4.0
AUC0.3.2audio0.1-11
autoFRK1.4.3autoimage2.2.3
automap1.1-12autostsm3.1.5
av0.9.2aweek1.0.3
aws2.5-6aws.signature0.6.0
awsMethods1.1-1AzureAppInsights0.3.1
AzureAuth1.3.3AzureCognitive1.0.1
AzureContainers1.3.2AzureCosmosR1.0.0
AzureGraph1.3.4AzureKusto1.1.3
AzureQstor1.0.1AzureRMR2.4.4
AzureStor3.7.0AzureTableStor1.0.0
AzureVision1.0.2AzureVM2.2.2
babelgene22.9babelwhale1.2.0
babette2.3.4BACCO2.1-0
BACCT1.0backports1.5.0
backtest0.3-4bacondecomp0.1.1
baggr0.7.8bain0.2.11
BalancedSampling2.0.6BaM1.0.3
bama1.3.0bamdit3.4.2
bamlss1.2-4BAMMtools2.1.12
bang1.0.4BANOVA1.2.1
BarcodingR1.0-3BART2.9.9
bartCause1.0-9bartcs1.2.2
bartMachine1.3.4.1bartMachineJARs1.2.1
BAS1.7.3basad0.3.0
base642.0.2base64enc0.1-3
base64url1.4baseballr1.6.0
basicMCMCplots0.2.7BASiNET0.0.5
BaSkePro1.1.1BasketballAnalyzeR0.5.0
BASS1.3.1BatchExperiments1.4.3
BatchJobs1.9batchmeans1.0-4
BAwiR1.3.2baycn1.2.0
bayefdr0.2.1bayes4psy1.2.12
bayesAB1.1.3bayesammi0.1.0
bayesanova1.6BayesARIMAX0.1.1
BayesBinMix1.4.1bayesbio1.0.0
bayesboot0.2.2BayesBP1.1
BayesCACE1.2.3BayesCombo1.0
BayesComm0.1-2bayescopulareg0.1.3
bayescount0.9.99-9BayesCR2.1
bayesCT0.99.3BayesCTDesign0.6.1
BayesDA2012.04-1bayesDccGarch3.0.4
bayesdfa1.3.3bayesdistreg0.1.0
bayesDP1.3.6BayesFactor0.9.12-4.7
BayesFM0.1.7bayesforecast1.0.1
bayesGAM0.0.2bayesGARCH2.1.10
BayesGOF5.2BayesGPfit1.1.0
BayesGWQS0.1.1bayesian1.0.1
bayesianETAS1.0.3BayesianFactorZoo0.0.0.3
Bayesiangammareg0.1.0BayesianGLasso0.2.0
BayesianLaterality0.1.2BayesianNetwork0.3.2
BayesianTools0.1.8bayesianVARs0.1.4
bayesImageS0.6-1BayesLCA1.9
bayesLife5.2-0BayesLN0.2.10
BayesLogit2.1bayeslongitudinal0.1.0
bayesm3.1-6BayesMallows2.2.2
bayesmeta3.4bayesmix0.7-6
bayesnec2.1.3.0bayesplot1.11.1
bayesQR2.4bayesRecon0.3.1
bayestestR0.14.0bayesTFR7.4-2
BayesTools0.2.17BayesTree0.3-1.5
BayesVarSel2.2.5BayesX0.3-3
BAYSTAR0.2-10baytrends2.0.12
BB2019.10-1bbk0.4.0
BBmisc1.13bbmle1.0.25.1
bbotk1.1.0BCBCSF1.0-1
BCC19970.1.1BClustLonG0.1.3
bcpa1.3.2bcrm0.5.4
BDgraph2.73bdrc1.1.0
bdsmatrix1.3-7BE0.2.4
beachmat2.20.0beadarray2.54.0
BeadDataPackR1.56.0beakr0.4.3
bearishTrader1.0.2beastier2.5.2
beautier2.6.12BED1.5.2
beepr2.0beeswarm0.4.0
benchmarkme1.0.8benchmarkmeData1.0.4
BenfordTests1.2.0bentcableAR0.3.1
Bergm5.0.7Bernadette1.1.5
berryFunctions1.22.5Bessel0.6-1
BetaBit2.2betafunctions1.9.0
betapart1.6betareg3.2-1
betategarch3.3BETS0.4.9
bets.covid191.0.0beyondWhittle1.2.1
bezier1.1.2bfast1.6.1
BGLR1.1.3BGVAR2.5.8
bgw0.1.3BH1.84.0-0
BHH22016.05.31BiasCorrector0.2.2
BiasedUrn2.0.12bibtex0.5.1
biclust2.0.3.1bidask2.0.6
bife0.7.2BIFIEsurvey3.6-6
biganalytics1.1.22bigchess1.9.1
bigD0.2.0bigleaf0.8.2
biglm0.9-3bigmemory4.6.4
bigmemory.sri0.1.8bigrquery1.5.1
bigsplines1.1-1bigtime0.2.3
BigVAR1.1.2bimets4.0.2
bindr0.1.1bindrcpp0.2.3
binhf1.0-3binman0.1.3
binom1.1-1.1binr1.1.1
binsegRcpp2023.8.31binseqtest1.0.4
bio3d2.4-4Biobase2.64.0
BiocFileCache2.12.0BiocGenerics0.50.0
BiocIO1.14.0BiocManager1.30.25
BiocParallel1.38.0BiocSingular1.20.0
BiocVersion3.19.1BioInsight0.3.1
biomaRt2.60.1biomartr1.0.7
biomformat1.32.0bioseq0.1.4
Biostrings2.72.1biotic0.1.2
bipartite2.20birtr1.0.0
BisqueRNA1.0.5bit4.5.0
bit644.5.2bitops1.0-9
biwavelet0.20.22bizdays1.0.16
bkmr0.2.2blaise1.3.11
blastula0.3.5blavaan0.5-6
blink1.1.0BLModel1.0.2
blob1.2.4blocklength0.1.5
blockmatrix1.0blockrand1.5
blocksdesign4.9blockTools0.6.4
blogdown1.19BLR1.6
BLRPM1.0BMA3.18.17
bmgarch2.0.0BMisc1.4.6
bmixture1.7BMS0.3.5
BMTAR0.1.1bnlearn5.0.1
BNPTSclust2.0BNSP2.2.3
bnstruct1.0.15boa1.1.8-2
boilerpipeR1.3.2BOIN2.7.2
boiwsa1.1.2Bolstad0.2-41
Bolstad21.0-29bondAnalyst1.0.1
bookdown0.40Boom0.9.15
BoomSpikeSlab1.2.6bootnet1.6
BootPR1.0bootstrap2019.6
bootUR1.0.4BoSSA3.7
boussinesq1.0.6boxr0.3.6
bpca1.3-6bqtl1.0-38
BradleyTerry21.1-2brainR1.6.0
brandwatchR0.3.0breakfast2.5
brew1.0-10brglm0.7.2
brglm20.9.2bridgesampling1.1-2
BRINDA0.1.5brio1.1.5
brms2.22.0Brobdingnag1.2-9
broman0.84broom1.0.7
brotli1.3.1bsam1.1.3
bsamGP1.2.5BSgenome1.72.0
bsicons0.1.2bslib0.8.0
BsMD2023.920bspec1.6
bspmma0.1-2bssm2.0.2
BSSprep0.1bsts0.9.10
bsvars3.1bsvarSIGNs1.0.1
BTLLasso0.1-13BTM0.3.7
bullishTrader1.0.1bundesbank0.1-12
bundesligR0.1.0BurStFin1.3
BurStMisc1.1BVAR1.0.5
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websocket1.4.2webutils1.2.2
wehoop2.1.0WeightedPortTest1.1
WeightIt1.3.1weights1.0.4
welo0.1.4WeMix4.0.3
WGCNA1.73WH1.1.2
whisker0.4.1whitebox2.4.0
whitening1.4.0whoami1.3.0
widgetframe0.3.1widgetTools1.82.0
WikidataQueryServiceR1.0.0WikidataR2.3.3
WikipediR1.7.1wikitaxa0.4.0
wildlifeDI1.0.0wilson2.4.2
windex2.0.8wINEQ1.2.1
withr3.0.1wk0.9.3
wktmo1.0.5wkutils0.1.3
wnl0.8.1wooldridge1.4-3
worcs0.1.15word2vec0.4.0
wordcloud2.6wordnet0.1-17
workflowr1.7.1workflows1.1.4
workflowsets1.1.0worldfootballR0.6.2
worldmet0.9.8worrms0.4.3
wpp20171.2-3wpp20191.1-1
wql1.0.1WrightMap1.4
writexl1.5.1WriteXLS6.7.0
wrMisc1.15.2wrProteo1.12.0
WRSS3.1wrswoR1.1.1
WRTDStidal1.1.4WufooR1.0.1
x121.10.3x13binary1.1.61
xaringan0.30XBRL0.99.19.1
xfun0.48xgboost1.7.8.1
xgxr1.1.2XLConnect1.1.0
xlsx0.6.5xlsxjars0.6.1
XML3.99-0.17xml21.3.6
XML2R0.0.8xmlrpc21.1
xopen1.0.1xplain0.2.2
xpose0.4.18xpose.nlmixr20.4.0
xpose44.7.3xslt1.4.6
xtable1.8-4xts0.14.0
XVector0.44.0xxIRT2.1.2
yaImpute1.0-34.1yaml2.3.10
yardstick1.3.1yesno0.1.3
yhatr0.15.1ympes1.5.0
yorkr0.0.42ypssc1.1.0
yuima1.15.27yulab.utils0.1.7
zeallot0.1.0zen4R0.10
zic0.9.1ZIM1.1.0
ZINARp0.1.0zip2.3.1
zipfR0.6-70zlib1.0.3
zlibbioc1.50.0zoo1.8-12
ZRA0.2ztable0.2.3
zTree1.0.7zyp0.11-1

RShiny Server

R: 4.3.1

rshiny-server: 1.5.21.1012

R packages (2906)

packageversionpackageversion
abc2.2.1abc.data1.0
abcrf1.9abglasso0.1.1
abind1.4-5abtest1.0.1
accrualPlot1.0.7acebayes1.10
acepack1.4.2acp2.1
acs2.1.4ACSWR1.0
actuar3.3-2ada2.0-5
adagio0.8.5adaptivetau2.2-3
adaptMCMC1.4adaptr1.3.2
adaptsmoFMRI1.2adaptTest1.1
ade41.7-22ade4TkGUI0.3-1
adegenet2.1.10adegraphics1.0-18
adehabitatHR0.4.21adehabitatHS0.3.17
adehabitatLT0.3.27adehabitatMA0.3.16
ADGofTest0.3adimpro0.9.6
admisc0.33AdMit2.1.9
ads1.5-9AER1.2-10
affy1.78.2affyio1.70.0
africamonitor0.2.3agricolae1.3-6
agricolaeplotr0.3.1agridat1.22
aion1.0.1airports0.1.0
akima0.6-3.4alabama2023.1.0
AlgDesign1.2.1almanac1.0.0
alphavantager0.1.3ALTopt0.1.2
Amelia1.8.1AmericanCallOpt0.95
ammiBayes1.0-1AMR2.1.0
AnaCoDa0.1.4.4anacor1.1-4
anesrake0.80animation2.7
anipaths0.10.2AnnotationDbi1.62.2
anytime0.3.9aod1.3.2
aoos0.5.0AovBay0.1.0
ape5.7-1APFr1.0.2
aplot0.2.1approximator1.2-8
ARCensReg3.0.1ArchaeoChron0.1
ArchaeoPhases1.8ArDec2.1-1
ARDL0.2.4ardl.nardl1.2.3
areal0.1.8arfima1.8-1
argo3.0.2argparse2.2.2
arkhe1.3.0arm1.13-1
aroma.apd0.7.0arrangements1.1.9
arrow13.0.0.1ars0.6
ascii2.4asd2.2
ash1.0-15ashr2.2-63
askpass1.2.0aspect1.0-6
ASSA2.0assertthat0.2.1
AssetCorr1.0.4astsa2.0
asymmetry2.0.4ata1.1.1
aTSA3.1.2attempt0.3.1
attention0.3.0AUC0.3.2
audio0.1-11autoFRK1.4.3
autoimage2.2.3automap1.1-9
autostsm3.1.2av0.8.5
aweek1.0.3aws2.5-3
awsMethods1.1-1BACCO2.1-0
BACCT1.0backports1.4.1
backtest0.3-4baggr0.7.6
bain0.2.10BalancedSampling1.6.3
BaM1.0.3bama1.3.0
bamdit3.4.0bamlss1.2-1
bang1.0.2BANOVA1.2.1
BART2.9.4bartBMA1.0
bartCause1.0-6bartMachine1.3.4.1
bartMachineJARs1.2.1BAS1.6.4
basad0.3.0base642.0.1
base64enc0.1-3base64url1.4
basicMCMCplots0.2.7BaSkePro0.1.0
BASS1.3.1BatchExperiments1.4.3
BatchJobs1.9batchmeans1.0-4
baycn1.2.0bayefdr0.2.1
bayes4psy1.2.12bayesAB1.1.3
bayesammi0.1.0bayesanova1.5
BayesARIMAX0.1.1BayesBinMix1.4.1
bayesbio1.0.0bayesboot0.2.2
BayesBP1.1bayesbr0.0.1.0
BayesCACE1.2.3BayesCombo1.0
BayesComm0.1-2bayescopulareg0.1.3
bayescount0.9.99-8BayesCR2.1
bayesCT0.99.3BayesCTDesign0.6.1
BayesDA2012.04-1bayesDccGarch3.0.4
bayesdfa1.2.0bayesdistreg0.1.0
bayesDP1.3.6BayesFactor0.9.12-4.5
BayesFM0.1.5bayesforecast1.0.1
bayesGAM0.0.2bayesGARCH2.1.10
BayesGOF5.2BayesGPfit1.1.0
BayesGWQS0.1.1bayesian0.0.9
bayesianETAS1.0.3Bayesiangammareg0.1.0
BayesianGLasso0.2.0BayesianLaterality0.1.2
BayesianNetwork0.3BayesianTools0.1.8
bayesImageS0.6-1BayesLCA1.9
bayesLife5.2-0bayeslincom1.3.0
BayesLN0.2.8BayesLogit2.1
bayeslongitudinal0.1.0bayesm3.1-6
BayesMallows1.3.2BayesMassBal1.1.0
bayesmeta3.3bayesmix0.7-6
bayesnec2.1.1.0bayesplot1.10.0
bayesQR2.4bayesRecon0.1.2
bayestestR0.13.1bayesTFR7.4-0
BayesTools0.2.16BayesTree0.3-1.4
BayesVarSel2.2.5BayesX0.3-2
BAYSTAR0.2-10BB2019.10-1
BBmisc1.13BCBCSF1.0-1
BCC19970.1.1BCE2.2.0
Bchron4.7.6bcp4.0.3
bcpa1.3.2bcrm0.5.4
BDgraph2.72bdsmatrix1.3-6
BE0.2.4beadarray2.50.0
BeadDataPackR1.52.0bearishTrader1.0.2
beepr1.3beeswarm0.4.0
benchmarkme1.0.8benchmarkmeData1.0.4
BenfordTests1.2.0bentcableAR0.3.1
Bergm5.0.6Bernadette1.1.4
Bessel0.6-0BetaBit2.2
betafunctions1.8.1betareg3.1-4
betategarch3.3BETS0.4.9
bets.covid191.0.0beyondWhittle1.2.0
bezier1.1.2bfast1.6.1
BFpack1.2.2BGGM2.0.4
BGLR1.1.0BGVAR2.5.2
BH1.81.0-1BHH22016.05.31
BiasedUrn2.0.11bibtex0.5.1
bidask1.0.0BIFIEsurvey3.4-15
biganalytics1.1.21bigD0.2.0
biglm0.9-2.1bigmemory4.6.1
bigmemory.sri0.1.6bigrquery1.4.2
bigsplines1.1-1bigtime0.2.3
BigVAR1.1.2bindr0.1.1
bindrcpp0.2.2binom1.1-1.1
binr1.1.1binseqtest1.0.4
Biobase2.60.0BiocGenerics0.46.0
BiocManager1.30.22BiocParallel1.34.2
BiocVersion3.17.1bioinactivation1.2.3
biomformat1.28.0bioOED0.2.1
Biostrings2.68.1birtr1.0.0
bit4.0.5bit644.0.5
bitops1.0-7biwavelet0.20.21
bizdays1.0.13bkmr0.2.2
blaise1.3.10blastula0.3.4
blavaan0.5-2BLModel1.0.2
blob1.2.4blocklength0.1.5
blockrand1.5blocksdesign4.9
blockTools0.6.4BLR1.6
BMA3.18.17bmgarch2.0.0
bmixture1.7BMS0.3.5
BMTAR0.1.1bnlearn4.9
BNPTSclust2.0BNSP2.2.3
boa1.1.8-2boilerpipeR1.3.2
BOIN2.7.2bold1.3.0
Bolstad0.2-41Bolstad21.0-29
bondAnalyst1.0.1bookdown0.35
Boom0.9.11BoomSpikeSlab1.2.5
bootnet1.5.5BootPR1.0
bootstrap2019.6bootUR1.0.2
bqtl1.0-35BradleyTerry21.1-2
brainR1.6.0breakfast2.3
brew1.0-8brglm0.7.2
brglm20.9bridgesampling1.1-2
brio1.1.3brms2.20.4
Brobdingnag1.2-9broman0.80
broom1.0.5bsam1.1.3
bsamGP1.2.4bslib0.5.1
BsMD2023.920bspec1.6
bspmma0.1-2bssm2.0.1
BSSprep0.1bsts0.9.9
bsvars1.0.0BTLLasso0.1-11
BTM0.3.7bullishTrader1.0.1
bundesbank0.1-9BurStFin1.3
BurStMisc1.1BVAR1.0.4
bvartools0.2.3ca0.71.1
cabootcrs2.1.0cachem1.0.8
cacIRT1.4CADFtest0.3-3
caffsim0.2.2Cairo1.6-1
calculus1.0.1CalibrateSSB1.3.0
calibrator1.2-8callr3.7.3
cancensus0.5.6candisc0.8-6
CANSIM2R1.14.1car3.1-2
CARBayes6.0CARBayesdata3.0
CARBayesST3.3.1carData3.0-5
caret6.0-94carfima2.0.2
caribou1.1-1cartogram0.3.0
caTools1.18.2catR3.17
causact0.5.3CausalImpact1.3.0
CAvariants5.9cbsodataR0.5.1
cccp0.2-9cdlTools0.15
CDM8.2-6cds1.0.3
CellNOptR1.46.0cellranger1.1.0
censusapi0.8.0CFtime1.0.0
ChainLadder0.2.18chandwich1.1.6
changepoint2.2.4changepoint.geo1.0.2
changepoint.np1.0.5checkLuhn1.1.0
checkmate2.2.0cherryblossom0.1.0
chilemapas0.3.0chk0.9.0
choiceDes0.9-3cholera0.8.0
CholWishart1.1.2chron2.3-61
cifti0.4.5cinterpolate1.0.0
CircSpaceTime0.9.0CircStats0.2-6
circular0.5-0ciTools0.6.1
classInt0.4-10cli3.6.1
clime0.5.0clinDR2.4.1
clinfun1.1.3clinicalsignificance1.2.0
clinPK0.11.1clinsig1.2
clipr0.8.0clisymbols1.2.0
clock0.7.0clue0.3-65
clustDRM0.1-0clusterGeneration1.3.8
clusterPower0.7.0ClustVarLV2.1.1
clv0.3-2.4cmaes1.0-12
CMLS1.0-1cmm1.0
cmocean0.3-1cmprsk2.2-11
cmrutils1.3.1cNORM3.0.3
CNORode1.42.0coalescentMCMC0.4-4
coalitions0.6.24coarseDataTools0.6-6
cobalt4.5.1coconots1.1.3
cocor1.1-4cocorresp0.4-3
cocron1.0-1coda0.19-4
coin1.4-3cointReg0.2.0
collapse1.9.6collapsibleTree0.1.7
colorRamps2.3.1colorspace2.1-0
colourpicker1.3.0colourvalues0.3.9
combinat0.0-8CombinS1.1-1
CommonJavaJars1.0-6commonmark1.9.0
compare0.2-6CompQuadForm1.4.3
conditionz0.1.0conf.design2.0.0
config0.3.2conflicted1.2.0
conquer1.3.3conquestr1.0.7
contactdata1.0.0contfrac1.1-12
convey0.2.5cops1.3-1
copula1.1-2copulaData0.0-1
cordillera1.0-0coro1.0.3
corona0.3.0coronavirus0.4.1
corpcor1.6.10corpora0.6
corporaexplorer0.8.6corrgram1.14
corrplot0.92cosa2.1.0
costat2.4.1countrycode1.5.0
COVID193.0.3covid19.analytics2.1.3.1
covid19dbcand0.1.1covid19france0.1.0
covid19italy0.3.1covid19sf0.1.2
covid19swiss0.1.0covid19us0.1.9
CovidMutations0.1.3cowplot1.1.1
CPBayes1.1.0cplm0.7-11
cpp110.4.6crawl2.3.0
crayon1.5.2credentials2.0.1
credule0.1.4crfsuite0.4.2
CRM1.2.4crmPack1.0.3
crossdes1.1-2Crossover0.1-21
crosstalk1.2.0crs0.15-37
crseEventStudy1.2.2crsmeta0.3.0
crul1.4.0cSEM0.5.0
cshapes2.0csodata1.4.2
cstab0.2-2csv0.6.2
ctbi2.0.5ctmcmove1.2.9
ctmm1.2.0ctrdata1.15.2
CTT2.3.3CTTShiny0.1
ctv0.9-5cubature2.1.0
cubble0.3.0Cubist0.4.2.1
curl5.1.0cvar0.5
cvAUC1.1.4CVST0.2-3
CVXR1.0-11d3Network0.5.2.1
DAAG1.25.4dae3.2.19
daewr1.2-11dagitty0.3-1
DAKS2.1-3DALEX2.4.3
data.table1.14.8data.tree1.0.0
DatabaseConnector6.2.4DataExplorer0.8.2
datapasta3.1.0dataseries0.2.0
datawizard0.9.0date1.2-42
datetimeoffset0.3.1datetimeutils0.6-2
dbarts0.9-23DBI1.1.3
DBItest1.7.3dbmss2.8-2
dbparser2.0.1dbplyr2.3.4
dbscan1.1-11dbx0.2.8
DChaos0.1-7dclone2.3-2
DCluster0.2-9DClusterm1.0-1
dcov0.1.1dCovTS1.4
dcurver0.9.2dde1.0.4
deBInfer0.4.4deducorrect1.3.7
deductive1.0.0deldir1.0-9
deltaPlotR1.6dendextend1.17.1
densEstBayes1.0-2.2DEoptim2.2-8
DEoptimR1.1-2depmix0.9.16
depmixS41.5-0DepthProc2.1.5
Deriv4.1.3derivmkts0.2.5
desc1.4.2DescTools0.99.50
designmatch0.5.4desirability2.1
deSolve1.38desplot1.10
devtools2.4.5dexter1.2.2
dextergui0.2.6dexterMST0.9.3
dfcomb3.1-1dfcrm0.2-2.1
dfidx0.0-5DFIT1.1
dfms0.2.1dfmta1.7-3
dfoptim2023.1.0dfped1.1
DHARMa0.4.6DHS.rates0.9.1
diagis0.2.3diagonals6.4.0
diagram1.6.5DiagrammeR1.0.10
dials1.2.0DiceDesign1.9
DiceEval1.5.1DiceKriging1.6.0
DiceView2.1-0dichromat2.0-0.1
DICOMread0.0.0.3DIFboost0.3
diffobj0.3.5diffpriv0.4.2
diffusion0.2.7DIFlasso1.0-4
difNLR1.4.2-1DIFplus1.1
difR5.1DIFtree3.1.6
digest0.6.33DIMORA0.3.5
dimRed0.2.6dina2.0.0
dipsaus0.2.8diptest0.76-0
Dire2.1.1DIRECT1.1.0
directlabels2023.8.25dirichletprocess0.4.2
disaggR1.0.5discretization1.0-1.1
DistatisR1.1.1distcrete1.0.3
distfree.cr1.5.1distr2.9.2
distrEx2.9.0distributional0.3.2
distributions30.2.1DistributionUtils0.6-1
distrom1.0.1distrTeach2.9.0
dittodb0.1.7divest0.10.3
divseg0.0.5dLagM1.1.13
dlm1.1-6dlnm2.4.7
dlstats0.1.7dmri.tracking0.1.0
doBy4.6.19doc2vec0.2.0
docopulae0.4.0DoE.base1.2-2
DoE.MIParray1.0-1DoE.wrapper0.12
doMC1.3.8doParallel1.0.17
doRNG1.8.6DoseFinding1.0-5
doSNOW1.0.20DOSPortfolio0.1.0
dotCall641.0-2Dowd0.12
downlit0.4.3downloader0.4
dparser1.3.1-10dplyr1.1.3
dqrng0.3.1dr4pl2.0.0
DriftBurstHypothesis0.4.0.1DRR0.0.4
dsa1.0.12DSAIDE0.9.6
dse2020.2-1DSI1.5.0
DSL0.1-7DT0.29
DTAT0.3-6DtD0.2.2
dti1.5.4dtplyr1.3.1
DTSg1.1.3dtt0.1-2
dtts0.1.1dtw1.23-1
dtwclust5.5.12duckdb0.8.1-3
dygraphs1.1.1.6dyn0.2-9.6
dynamicTreeCut1.63-1dynaTree1.2-16
dynlm0.3-6e10711.7-13
earlyR0.0.5earth5.3.2
easypower1.0.1easySdcTable1.0.7
eba1.10-0EbayesThresh1.4-12
ebdbNet1.2.8EBImage4.42.0
EBMAforecast1.0.3ecb0.4.2
Ecdat0.4-2ecespa1.1-17
Ecfun0.3-2ecm7.0.0
ecodist2.0.9ECOSolveR0.5.5
ecp3.1.5edfReader1.2.1
edgeR3.42.4edina0.1.1
editrules2.9.3edmdata1.2.0
edstan1.0.6EdSurvey4.0.1
eegkit1.0-4eegkitdata1.1
EFAutilities2.1.3effects4.2-2
EGAnet2.0.1egg0.4.5
egor1.23.3eha2.11.1
eigenmodel1.11elastic1.2.0
elasticnet1.3elevatr0.99.0
ellipse0.5.0ellipsis0.3.2
elliptic1.4-0emayili0.7.18
EMbC2.0.4EMD1.5.9
emdi2.2.0emg1.0.9
emmeans1.8.8emulator1.2-21
encode0.3.6endtoend2.29
energy1.7-11EngrExpt0.1-8
enrichwith0.3.1ensembleBMA5.1.8
EntropyMCMC1.0.4EnvStats2.8.1
Epi2.47.1epibasix1.5
epicontacts1.1.3EpiContactTrace0.17.0
EpiCurve2.4-2epiDisplay3.5.0.2
EpiEstim2.2-4epiflows0.2.1
EpiILM1.5.2EpiILMCT1.1.7
epimdr0.6-5EpiModel2.4.0
epinet2.1.8EpiNow21.4.0
epiR2.0.65EpiReport1.0.2
episensr1.3.0epitools0.5-10.1
epitrix0.4.0epitweetr2.2.13
epo0.1.0equate2.0.8
equateIRT2.3.0equateMultiple0.1.1
equivalence0.7.2era0.4.1
ergm4.5.0ergm.ego1.1.0
ergm.multi0.2.0eRm1.0-4
errorlocate1.1.1errum0.0.3
esaBcv1.2.1.1esemifar1.0.1
ESG1.3EstCRM1.6
estimability1.4.1EstimateGroupNetwork0.3.1
ETLUtils1.5etm1.1.1
etrm1.0.1etrunct0.1
eurostat3.8.2evaluate0.22
evd2.3-6.1ewoc0.3.0
Exact3.2exactextractr0.10.0
exams2.4-0ExceedanceTools1.3.6
exdex1.2.2EXPARMA0.1.0
experiment1.2.1expint0.1-8
expm0.999-7ExPosition2.8.23
expsmooth2.3extraDistr1.9.1
extrafont0.19extrafontdb1.0
extraoperators0.1.1eyelinker0.2.1
ez4.4-0fable0.3.3
fable.prophet0.1.0fabletools0.3.3
FactoClass1.2.8FactoMineR2.8
fanplot4.0.0fansi1.0.4
FAOSTAT2.3.0faoutlier0.7.6
faraway1.0.8farver2.1.1
fAssets4023.85fastcluster1.2.3
fastDummies1.7.3fastGHQuad1.0.1
fastICA1.2-3fastLink0.6.0
fastmap1.1.1fastmatch1.1-4
fasttime1.1-0FatTailsR1.8-0
FAVAR0.1.3fBasics4022.94
fBonds3042.78fCopulae4022.85
FCVAR0.1.4fda6.1.4
fdaACF1.0.0fdrtool1.2.17
fds1.8fdth1.2-6
feasts0.3.1fechner1.0-3
FeedbackTS1.5fExtremes4021.83
ff4.0.9FFD1.0-9
fftwtools0.9-11fGarch4022.89
fHMM1.1.0FielDHub1.3.1
fields15.2filearray0.1.6
filehash2.4-5filehashSQLite0.2-6
filelock1.0.2filematrix1.3
fImport4021.86finalsize0.2.0
FinancialMath0.1.1FinAsym1.0
findpython1.0.8finnts0.3.0
finreportr1.0.4FinTS0.4-6
fishMod0.29fitdistrplus1.1-11
FKF0.2.4FKF.SP0.3.1
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tseriesChaos0.1-13.1tseriesEntropy0.7-2
tseriesTARMA0.3-4tsfeatures1.1.1
tsfknn0.5.2tsibble1.1.3
tsibbledata0.4.1tsibbletalk0.1.0
tsintermittent1.10tsiR0.4.3
TSLSTM0.1.0tsModel0.6-1
tsoutliers0.6-8TSP1.2-4
tsPI1.0.4TSrepr1.1.0
tsrobprep0.3.2tssim0.1.7
TSstudio0.1.7TSTutorial1.2.7
tsutils0.9.3tswge2.1.0
TTR0.24.3tune1.1.2
turner0.1.7tvm0.5.2
twdtw1.0-1tweedie2.3.5
tweenr2.0.2twosamples2.0.1
tzdb0.4.0ubiquity2.0.0
ucminf1.2.0UComp4.0.2
udpipe0.8.11ufRisk1.0.6
ugatsdb0.2.3uGMAR3.4.5
UnifiedDoseFinding0.1.10units0.8-4
univOutl0.4unrepx1.0-2
uptasticsearch0.4.0urca1.3-3
urlchecker1.0.1urltools1.7.3
uroot2.1-2usdata0.2.0
usethis2.2.2usmap0.6.2
usmapdata0.1.0utf81.2.3
uuid1.1-1uwot0.1.16
V84.3.3validate1.1.3
validatetools0.5.2vapour0.9.5
VAR.etp1.1VARDetect0.1.6
vardiag0.2-1vardpoor0.20.1
VaRES1.0.2vars1.5-9
VARshrink0.3.1varycoef0.3.4
VCA1.4.5vcd1.4-11
vcdExtra0.8-5vctrs0.6.3
vdg1.2.2VedicDateTime0.1.9
vegan2.6-4VennDiagram1.7.3
venneuler1.1-3VGAM1.1-9
VGAMdata1.1-9vglmer1.0.3
VIM6.2.2VineCopula2.5.0
viridis0.6.4viridisLite0.4.2
visNetwork2.1.2visualize4.4.0
volatilityTrader1.0.1vpc1.2.2
vroom1.6.4vrtest1.2
waiter0.2.5waldo0.5.1
warp0.2.0Watersheds1.1
WaveletComp1.1wavelets0.3-0.2
WaveSampling0.1.3waveslim1.8.4
wavethresh4.7.2wavScalogram1.1.2
wCorr1.9.8WDI2.7.8
webshot0.5.5WeightedPortTest1.1
WeightIt0.14.2weights1.0.4
WeMix4.0.0whisker0.4.1
whitebox2.3.1widgetframe0.3.1
WikidataQueryServiceR1.0.0WikidataR2.3.3
WikipediR1.5.0wikitaxa0.4.0
wildlifeDI0.5.0wINEQ1.2.0
withr2.5.1wk0.8.0
wktmo1.0.5wkutils0.1.3
wnl0.7.3wooldridge1.4-3
word2vec0.3.4wordcloud2.6
wordnet0.1-16workflows1.1.3
workflowsets1.0.1worrms0.4.3
wpp20171.2-3wpp20191.1-1
WrightMap1.3writexl1.4.2
wrswoR1.1.1x121.10.3
x13binary1.1.57-4XBRL0.99.19.1
xfun0.40xgboost1.7.5.1
xgxr1.1.2XLConnect1.0.7
xlsx0.6.5xlsxjars0.6.1
XML3.99-0.14xml21.3.5
xopen1.0.0xplain0.2.2
xpose0.4.17xpose.nlmixr20.4.0
xpose44.7.2xtable1.8-4
xts0.13.1XVector0.40.0
xxIRT2.1.2yaImpute1.0-33
yaml2.3.7yardstick1.2.0
yesno0.1.2yuima1.15.22
yulab.utils0.1.0zeallot0.1.0
zic0.9.1ZIM1.1.0
ZINARp0.1.0zip2.3.0
zipfR0.6-70zlibbioc1.46.0
zoo1.8-12ZRA0.2

After the virtual machine is started, you can access the Workbench (RStudio Server) with its public IP address. For example, if the IP address is 10.11.12.13, typing http://10.11.12.13 in the browser will bring you to the following startup page:

main page

The default username is ruser and the password is the last 12 digits of the vmId. The vmId can be found in the JSON View with the form of 1f61b751-037a-489e-8638-3fc32fe6894d. Only the last 12 digits 3fc32fe6894d are used as the password.

Azure VM console

azure_json_view

JSON View

azure_rstudio_password

Workbench (RStudio Server)

R: 4.3.0
rstudio-server: 2023.12.1-402

R packages (3826)

packageversionpackageversion
a41.50.1a4Base1.50.0
a4Classif1.50.0a4Core1.50.0
a4Preproc1.50.0a4Reporting1.50.0
ABarray1.70.0abind1.4-5
abseqR1.20.0ABSSeq1.56.0
acde1.32.0ACE1.20.0
aCGH1.80.0ACME2.58.0
ada2.0-5adabag5.0
ADaCGH22.42.0ADAM1.18.0
ADAMgui1.18.0additivityTests1.1-4.1
adductData1.18.0adductomicsR1.18.0
ade41.7-22adehabitatLT0.3.27
adehabitatMA0.3.16ADGofTest0.3
ADImpute1.12.0admisc0.35
adSplit1.72.0adverSCarial1.0.0
AffiXcan1.20.0affxparser1.74.0
affy1.80.0affycomp1.78.0
affyContam1.60.0affycoretools1.74.0
affydata1.50.0affyILM1.54.0
affyio1.72.0affylmGUI1.76.0
affyPLM1.78.0AffyRNADegradation1.48.0
AGDEX1.50.0aggregateBioVar1.12.0
aggregation1.0.1agilp3.34.0
AgiMicroRna2.52.0agricolae1.3-7
AHMassBank1.2.1AhoCorasickTrie0.1.2
AICcmodavg2.3-3AIMS1.34.0
airpart1.10.0airway1.22.0
akima0.6-3.4akmbiclust0.1.0
alabama2023.1.0alabaster1.2.0
alabaster.base1.2.1alabaster.bumpy1.2.0
alabaster.files1.0.0alabaster.mae1.2.0
alabaster.matrix1.2.0alabaster.ranges1.2.0
alabaster.sce1.2.0alabaster.schemas1.2.0
alabaster.se1.2.0alabaster.spatial1.2.0
alabaster.string1.2.0alabaster.vcf1.2.0
ALDEx21.34.0alevinQC1.18.0
AlgDesign1.2.1ALL1.44.0
AllelicImbalance1.40.0alluvial0.1-2
AlphaBeta1.16.0AlpsNMR4.4.0
altcdfenvs2.64.0amap0.8-19
AMARETTO1.18.0AMOUNTAIN1.28.0
amplican1.24.0analogue0.17-6
Anaquin2.26.0ANCOMBC2.4.0
AneuFinder1.30.0AneuFinderData1.30.0
ANF1.24.1animalcules1.18.3
animation2.7annaffy1.74.0
anndata0.7.5.6annmap1.44.0
annotate1.80.0AnnotationDbi1.64.1
AnnotationFilter1.26.0AnnotationForge1.44.0
AnnotationHub3.10.0AnnotationHubData1.32.1
annotationTools1.76.0annotatr1.28.0
anota1.50.0anota2seq1.24.0
antiProfiles1.42.0AnVIL1.14.2
AnVILBilling1.12.0AnVILPublish1.12.0
AnVILWorkflow1.2.0anytime0.3.9
aod1.3.3aods30.4-1.2
APAlyzer1.16.0apcluster1.4.11
apComplex2.68.0ape5.7-1
apeglm1.24.0APL1.6.1
aplot0.2.2appreci8R1.20.2
archive1.1.7argparse2.2.2
aricode1.0.3arm1.13-1
aroma.affymetrix3.2.2aroma.apd0.7.0
aroma.core3.3.1aroma.light3.32.0
ArrayExpress1.62.0arrayhelpers1.1-0
arrayMvout1.60.0arrayQuality1.80.0
arrayQualityMetrics3.58.0ARRmData1.38.0
ARRmNormalization1.42.0arrow15.0.1
artMS1.20.0arules1.7-7
ASAFE1.28.0ASEB1.46.3
ASGSCA1.36.0ash1.0-15
ashr2.2-63ASICS2.18.1
askpass1.2.0ASpli2.12.0
assertive.base0.0-9assertive.files0.0-2
assertive.numbers0.0-2assertive.sets0.0-3
assertthat0.2.1AssessORF1.20.0
ASSET2.20.0ASSIGN1.38.0
ASURAT1.6.0ATACCoGAPS1.4.0
ATACseqQC1.26.0ATACseqTFEA1.4.0
atena1.8.0atSNP1.18.0
attempt0.3.1attract1.54.0
AUCell1.24.0autonomics1.10.2
available1.1.0AWFisher1.16.0
aws2.5-5aws.s30.3.21
aws.signature0.6.0awsMethods1.1-1
awst1.10.0BaalChIP1.28.0
babelgene22.9backbone2.1.3
backports1.4.1bacon1.30.0
BADER1.40.0BadRegionFinder1.30.0
BAGS2.42.0ballgown2.34.0
bambu3.4.0bamlss1.2-3
bamsignals1.34.0BANDITS1.18.1
bandle1.6.0banocc1.26.0
barcodetrackR1.10.0base642.0.1
base64enc0.1-3base64url1.4
basecallQC1.26.0baseline1.3-5
BaseSpaceR1.46.0Basic4Cseq1.38.0
BASiCS2.14.0BASiCStan1.4.0
BasicSTARRseq1.30.0basilisk1.14.3
basilisk.utils1.14.1batchelor1.18.1
BatchJobs1.9BatchQC1.30.0
batchtools0.9.17BayesKnockdown1.28.0
bayesm3.1-6BayesSpace1.12.0
bayNorm1.20.0baySeq2.36.0
BB2019.10-1BBCAnalyzer1.32.0
BBmisc1.13bbmle1.0.25.1
bbotk0.8.0bcellViper1.38.0
BCRANK1.64.0bcSeq1.24.0
bdsmatrix1.3-7beachmat2.18.1
beachmat.hdf51.0.0beadarray2.52.0
beadarraySNP1.68.0BeadDataPackR1.54.0
beanplot1.3.1BEARscc1.22.0
BEAT1.40.0BEclear2.18.0
beer1.6.0beeswarm0.4.0
bench1.1.3benchdamic1.8.2
benchmarkme1.0.8benchmarkmeData1.0.4
bestNormalize1.9.1betareg3.1-4
bezier1.1.2BG21.2.0
BgeeCall1.18.1BgeeDB2.28.0
bgx1.68.3BH1.84.0-0
BHC1.54.0BiasedUrn2.0.11
bibtex0.5.1BicARE1.60.0
biclust2.0.3.1BiFET1.22.0
biganalytics1.1.21bigassertr0.1.6
BiGGR1.38.0biglm0.9-2.1
bigmelon1.28.0bigmemory4.6.4
bigmemory.sri0.1.8bigparallelr0.3.2
bigrquery1.5.1bigstatsr1.5.12
billboarder0.4.1BindingSiteFinder2.0.0
binom1.1-1.1binr1.1.1
bioassayR1.40.0Biobase2.62.0
biobroom1.34.0biobtreeR1.14.0
bioCancer1.30.8BioCartaImage1.0.0
BiocBaseUtils1.4.0BiocBook1.0.0
BiocCheck1.38.2BiocFHIR1.4.0
BiocFileCache2.10.1BiocGenerics0.48.1
biocGraph1.64.0BiocHail1.2.0
BiocHubsShiny1.2.0BiocIO1.12.0
BiocManager1.30.22BiocNeighbors1.20.2
BioCor1.26.0BiocParallel1.36.0
BiocPkgTools1.20.0BiocSet1.16.1
BiocSingular1.18.0BiocSklearn1.24.0
BiocStyle2.30.0biocthis1.12.0
BiocVersion3.18.1biocViews1.70.0
BiocWorkflowTools1.28.0biodb1.10.0
biodbChebi1.8.0biodbExpasy1.6.0
biodbKegg1.8.0biodbLipidmaps1.8.0
biodbMirbase1.5.0biodbNcbi1.6.0
biodbNci1.6.0biodbUniprot1.8.0
bioDist1.74.0biomaRt2.58.2
biomartr1.0.7biomformat1.30.0
BioMVCClass1.70.0biomvRCNS1.42.2
BioNAR1.4.4BioNERO1.10.1
BioNet1.62.0BioNetStat1.22.0
BioQC1.30.0biosigner1.30.0
Biostrings2.70.3BioTIP1.16.0
biotmle1.26.0biovizBase1.50.0
BiRewire3.34.0biscuiteer1.16.0
biscuiteerData1.16.0BiSeq1.42.0
bit4.0.5bit644.0.5
bitops1.0-7biwt1.0.1
blacksheepr1.16.0bladderbatch1.40.0
BlandAltmanLeh0.3.1blima1.36.0
BLMA1.26.0blme1.0-5
blob1.2.4blockmodeling1.1.5
BloodGen3Module1.10.0bluster1.12.0
BMA3.18.17bmp0.3
bnbc1.24.2bnem1.10.0
bnlearn4.9.3bnstruct1.0.15
BOBaFIT1.6.0bookdown0.38
BoolNet2.1.9bootstrap2019.6
borealis1.6.0BPRMeth1.28.0
BRAIN1.48.0brainflowprobes1.16.0
branchpointer1.28.0breakpointR1.20.0
breakpointRdata1.20.0breastCancerVDX1.40.0
brendaDb1.16.0brew1.0-10
BRGenomics1.14.1brglm0.7.2
BridgeDbR2.12.0brio1.1.4
BRISC1.0.5broom1.0.5
broom.helpers1.14.0broom.mixed0.2.9.4
BrowserViz2.24.0bs4Dash2.3.3
BSDA1.2.2BSgenome1.70.2
BSgenome.Celegans.UCSC.ce21.4.0BSgenome.Drerio.UCSC.danRer71.4.0
BSgenome.Ecoli.NCBI.200808051.3.1000BSgenome.Hsapiens.1000genomes.hs37d50.99.1
BSgenome.Hsapiens.NCBI.GRCh381.3.1000BSgenome.Hsapiens.UCSC.hg181.3.1000
BSgenome.Hsapiens.UCSC.hg191.4.3BSgenome.Hsapiens.UCSC.hg381.4.5
BSgenome.Mmusculus.UCSC.mm101.4.3BSgenome.Mmusculus.UCSC.mm91.4.0
BSgenomeForge1.2.1bslib0.6.1
bsplus0.1.4bsseq1.38.0
BubbleTree2.32.0BufferedMatrix1.66.0
BufferedMatrixMethods1.66.0bugsigdbr1.8.4
BUMHMM1.26.0bumphunter1.44.0
BumpyMatrix1.10.0BUS1.58.0
BUScorrect1.20.0BUSpaRse1.16.1
BUSseq1.8.0butcher0.3.3
BWStest0.2.3C500.1.8
ca0.71.1cachem1.0.8
CaDrA1.0.2CAEN1.10.0
CAFE1.38.0CAGEfightR1.22.0
cageminer1.8.0CAGEr2.8.0
Cairo1.6-2calibrate1.7.7
callr3.7.5calm1.16.0
CAMERA1.58.0canceR1.36.7
cancerclass1.46.0capushe1.1.2
car3.1-2carData3.0-5
cardelino1.4.0Cardinal3.4.3
CardinalIO1.0.0caret6.0-94
caretEnsemble2.0.3CARNIVAL2.12.0
casper2.36.0CATALYST1.26.0
catdata1.2.4Category2.68.0
categoryCompare1.46.0CatEncoders0.1.1
caTools1.18.2CausalR1.34.0
cba0.2-23cbaf1.24.0
CBEA1.2.0cBioPortalData2.14.2
CBNplot1.2.1cbpManager1.10.0
ccaPP0.3.3ccdata1.28.0
ccfindR1.22.0ccImpute1.4.0
ccmap1.28.0CCP1.2
CCPlotR1.0.0CCPROMISE1.28.0
ccrepe1.38.1ccTensor1.0.2
CDFt1.2CDI1.0.2
celaref1.20.0celda1.18.1
celestial1.4.6CellaRepertorium1.12.0
CellBarcode1.8.1cellbaseR1.26.0
CellBench1.18.0celldex1.12.0
cellHTS22.66.0CelliD1.10.1
cellity1.30.0CellMapper1.28.0
cellmigRation1.10.0CellMixS1.18.0
CellNOptR1.48.0cellranger1.1.0
cellscape1.26.0CellScore1.22.0
CellTrails1.20.0cellxgenedp1.6.1
CEMiTool1.26.1censcyt1.10.0
Cepo1.8.0ceRNAnetsim1.14.1
CeTF1.14.0CexoR1.40.0
CFAssay1.36.0cfdnakit1.0.0
cfDNAPro1.8.0cfTools1.2.0
cfToolsData1.0.0CGEN3.38.0
CGHbase1.62.0CGHcall2.64.0
cghMCR1.60.0CGHnormaliter1.56.0
CGHregions1.60.0ChAMP2.32.0
ChAMPdata2.34.0changepoint2.2.4
changepoint.np1.0.5checkmate2.3.1
ChemmineOB1.40.0ChemmineR3.54.0
chemometrics1.4.4CHETAH1.18.0
Chicago1.30.0chihaya1.2.0
chimeraviz1.28.0ChIPanalyser1.24.0
ChIPComp1.32.0chipenrich2.26.0
chipenrich.data2.26.0ChIPexoQual1.26.0
ChIPpeakAnno3.36.1ChIPQC1.38.0
ChIPseeker1.38.0chipseq1.52.0
ChIPseqR1.56.0ChIPsim1.56.0
ChIPXpress1.46.0ChIPXpressData1.40.0
chk0.9.1chopsticks1.68.0
chromDraw2.32.0ChromHeatMap1.56.0
chromhmmData0.99.2chromPlot1.30.0
ChromSCape1.12.0chromstaR1.28.0
chromstaRData1.28.0chromVAR1.24.0
chron2.3-61CHRONOS1.30.0
cicero1.20.0CIMICE1.10.0
CINdex1.30.0circlize0.4.16
circRNAprofiler1.16.0CircSeqAlignTk1.4.0
CircStats0.2-6circular0.5-0
cisPath1.42.0CiteFuse1.14.0
Ckmeans.1d.dp4.3.5ClassifyR3.6.5
classInt0.4-10cleanUpdTSeq1.40.0
cleaver1.40.0clevRvis1.2.0
cli3.6.2clippda1.52.0
clipper1.42.0clipr0.8.0
cliProfiler1.8.0cliqueMS1.16.0
clisymbols1.2.0clock0.7.0
Clomial1.38.0clst1.50.0
clstutils1.50.0clue0.3-65
CluMSID1.18.0clustComp1.30.0
clusterCons1.2clusterExperiment2.22.0
ClusterJudge1.24.0clusterProfiler4.10.1
ClusterR1.3.2clusterRepro0.9
clusterSeq1.26.0ClusterSignificance1.30.0
clusterSim0.51-3clusterStab1.74.0
clustifyr1.14.0ClustIRR1.0.0
clustree0.5.1clustvarsel2.3.4
clv0.3-2.4clValid0.7
CMA1.60.0cMAP1.15.1
cMap2data1.38.0cmapR1.14.0
cmdfun1.0.2cn.farms1.50.0
cn.mops1.48.0CNAnorm1.48.0
CNEr1.38.0CNORdt1.44.0
CNORfeeder1.42.0CNORfuzzy1.44.0
CNORode1.44.0CNTools1.58.0
CNVfilteR1.16.0cnvGSA1.46.0
CNViz1.10.0CNVMetrics1.6.0
CNVPanelizer1.34.0CNVRanger1.18.1
CNVrd21.40.0cobs1.3-8
CoCiteStats1.74.0COCOA2.16.0
coda0.19-4.1CodeDepends0.6.5
codelink1.70.0CODEX1.34.0
CoGAPS3.22.0cogena1.36.0
cogeqc1.6.2Cogito1.8.0
coGPS1.46.0COHCAP1.48.0
COHCAPanno1.38.0coin1.4-3
cola2.8.0collapse2.0.10
collections0.3.7colorRamps2.3.4
colorspace2.1-0colourpicker1.3.0
colourvalues0.3.9comapr1.6.1
combi1.14.0combinat0.0-8
coMET1.34.0coMethDMR1.6.0
common1.1.2commonmark1.9.1
compareGroups4.8.0COMPASS1.40.0
compcodeR1.38.0compEpiTools1.36.0
ComplexHeatmap2.18.0ComplexUpset1.3.3
compositions2.0-8CompoundDb1.6.0
CompQuadForm1.4.3ComPrAn1.10.0
compSPOT1.0.0concaveman1.1.0
concordexR1.2.0condformat0.10.1
condiments1.10.0CONFESS1.30.0
config0.3.2configr0.3.5
confintr1.0.2conflicted1.2.0
conicfit1.0.4consensus1.20.0
ConsensusClusterPlus1.66.0consensusDE1.20.0
consensusOV1.24.0consensusSeekeR1.30.0
consICA2.0.0ConsRank2.1.4
CONSTANd1.10.0contiBAIT1.30.0
contrast0.24.2conumee1.36.0
convert1.78.0coop0.6-3
copa1.70.0copula1.1-3
CopyNumberPlots1.18.0coRdon1.20.0
CoreGx2.6.1Cormotif1.48.0
coro1.0.4corpcor1.6.10
corral1.12.0CORREP1.68.0
corrgram1.14corrplot0.92
coseq1.26.0CoSIA1.2.0
COSMIC.671.38.0cosmiq1.36.0
cosmosR1.10.0COSNet1.36.0
COTAN2.2.3countrycode1.5.0
countsimQC1.20.0covEB1.28.0
CoverageView1.40.0covr3.6.4
covRNA1.28.0cowplot1.1.3
cp4p0.3.6cplm0.7-12
cpp110.4.7cpvSNP1.34.0
cqn1.48.0crayon1.5.2
credentials2.0.1CRImage1.50.0
crisprBase1.6.0crisprBowtie1.6.0
crisprBwa1.6.0crisprDesign1.4.0
crisprScore1.6.0crisprScoreData1.6.0
CRISPRseek1.42.0CrispRVariants1.30.0
crisprVerse1.4.0crisprViz1.4.0
crlmm1.60.0crmn0.0.21
crossmeta1.28.0crosstalk1.2.1
crul1.4.0CSAR1.54.0
csaw1.36.1csdR1.8.0
CSSQ1.14.0ctc1.76.0
CTdata1.2.0CTDquerier2.10.0
cTRAP1.20.0ctsGE1.28.0
CTSV1.4.0cubature2.1.0
Cubist0.4.2.1cummeRbund2.44.0
CuratedAtlasQueryR1.0.1curatedTCGAData1.24.1
curl5.2.1customCMPdb1.12.0
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STATegRa1.38.0Statial1.4.5
statip0.2.3statmod1.5.0
statnet.common4.9.0statTarget1.32.0
STdeconvolve1.6.0stemHypoxia1.38.0
stepNorm1.74.0stJoincount1.4.0
stopwords2.3storr1.2.5
strandCheckR1.20.0strawr0.0.91
Streamer1.48.0strex2.0.0
STRINGdb2.14.3stringdist0.9.12
stringfish0.16.0stringi1.8.3
stringr1.5.1strucchange1.5-3
struct1.14.1Structstrings1.18.0
structToolbox1.14.0StructuralVariantAnnotation1.18.0
styler1.10.2SubCellBarCode1.18.0
subSeq1.32.0SUITOR1.4.0
SummarizedBenchmark2.20.0SummarizedExperiment1.32.0
summarytools1.0.1Summix2.8.0
superheat0.1.0SuperLearner2.0-29
supersigs1.10.0SuppDists1.1-9.7
supraHex1.40.0surfaltr1.8.0
survcomp1.52.0survey4.4-1
survivalAnalysis0.3.0survivalROC1.0.3.1
survivalsvm0.0.5survminer0.4.9
survMisc0.5.6survtype1.18.0
sva3.50.0svaNUMT1.8.0
svaRetro1.8.0svd0.5.5
svglite2.1.3svgPanZoom0.3.4
SVMDO1.2.8svMisc1.2.3
svUnit1.0.6swamp1.5.1
SWATH2stats1.32.1SwathXtend2.24.0
swfdr1.28.0switchBox1.38.0
switchde1.28.0sylly0.1-6
sylly.en0.1-3synapsis1.8.0
synapter2.26.0synergyfinder3.10.3
SynExtend1.14.0synlet2.2.0
SynMut1.18.0syntenet1.4.0
sys3.4.2systemfonts1.0.6
systemPipeR2.8.0systemPipeShiny1.12.0
systemPipeTools1.10.0syuzhet1.0.7
tadar1.0.0TADCompare1.12.1
tagcloud0.6tanggle1.8.0
TAPseq1.14.1target1.16.0
TargetDecoy1.8.0TargetScore1.40.0
TargetSearch2.4.2TBSignatureProfiler1.14.0
TBX20BamSubset1.38.0TCA1.2.1
TCC1.42.0TCGAbiolinks2.30.0
TCGAbiolinksGUI.data1.22.0TCGAutils1.22.2
tcltk21.2-11TCseq1.26.0
TDbasedUFE1.2.0TDbasedUFEadv1.2.0
TeachingDemos2.13TEKRABber1.6.0
tensor1.5tensorA0.36.2.1
tensorflow2.15.0TENxIO1.4.0
TENxPBMCData1.20.0tenXplore1.24.0
TEQC4.24.0ternarynet1.46.0
terra1.7-71terraTCGAdata1.6.0
tester0.1.7testthat3.2.1
text2vec0.6.4textclean0.9.3
textshape1.7.3textshaping0.3.7
textstem0.1.4TFARM1.24.0
tfautograph0.3.2TFBSTools1.40.0
TFEA.ChIP1.22.0TFHAZ1.24.0
TFisher0.2.0TFMPvalue0.0.9
tfprobability0.15.1tfruns1.5.2
TFutils1.22.0TH.data1.1-2
threejs0.3.3tibble3.2.1
tictoc1.2.1tidybayes3.0.6
tidybulk1.14.3tidydr0.0.5
tidygraph1.3.1tidyHeatmap1.8.1
tidyr1.3.1tidyselect1.2.1
tidySingleCellExperiment1.12.0tidySummarizedExperiment1.12.0
tidytext0.4.1tidytidbits0.3.2
tidytree0.4.6tidyverse2.0.0
tiff0.1-12tigre1.56.0
tiledb0.24.0TileDBArray1.12.0
tilingArray1.80.0timechange0.3.0
timecourse1.74.0timeDate4032.109
timeOmics1.14.0timescape1.26.0
timeSeries4032.109TimiRGeN1.11.0
timsac1.3.8-4TIN1.34.0
tinytex0.50tippy0.1.0
TissueEnrich1.22.0TitanCNA1.40.0
tkrplot0.0-27tkWidgets1.80.0
tLOH1.10.0tm0.7-12
TMB1.9.10TMixClust1.24.0
tmvtnorm1.6TNBC.CMS1.18.0
TnT1.24.0TOAST1.16.0
tokenizers0.3.0tomoda1.12.0
tomoseqr1.6.0TOP1.2.0
topconfects1.18.0topdownr1.24.0
topGO2.54.0topicmodels0.2-16
torch0.12.0ToxicoGx2.6.0
TPP3.30.0TPP2D1.18.0
tracktables1.36.0trackViewer1.38.2
tractor.base3.4.2tradeSeq1.16.0
TrajectoryGeometry1.10.1TrajectoryUtils1.10.1
transcriptogramer1.24.0transcriptR1.30.0
transformGamPoi1.8.0transformr0.1.5
transite1.20.1tRanslatome1.40.0
transomics2cytoscape1.12.0transport0.14-7
TransView1.46.0traseR1.32.0
traviz1.8.0TreeAndLeaf1.14.0
treeio1.26.0treekoR1.10.0
treemap2.4-4TreeSummarizedExperiment2.10.0
TREG1.6.0Trendy1.24.1
TRESS1.8.0tricycle1.10.0
triebeard0.4.1trigger1.48.0
trio3.40.0triplex1.42.0
tripr1.8.0tRNA1.20.1
tRNAdbImport1.20.1tRNAscanImport1.22.0
TRONCO2.34.0truncdist1.0-2
truncnorm1.0-9trust0.1-8
TSCAN1.40.1tseries0.10-55
tsne0.1-3.1TSP1.2-4
ttgsea1.10.0TTMap1.24.0
TTR0.24.4ttservice0.4.0
TurboNorm1.50.0TVTB1.28.0
tweeDEseq1.48.0tweedie2.3.5
tweenr2.0.3twilight1.78.0
twoddpcr1.26.0txcutr1.8.0
TxDb.Celegans.UCSC.ce6.ensGene3.2.2TxDb.Dmelanogaster.UCSC.dm3.ensGene3.2.2
TxDb.Dmelanogaster.UCSC.dm6.ensGene3.12.0TxDb.Hsapiens.UCSC.hg18.knownGene3.2.2
TxDb.Hsapiens.UCSC.hg19.knownGene3.2.2TxDb.Hsapiens.UCSC.hg38.knownGene3.18.0
TxDb.Mmusculus.UCSC.mm10.knownGene3.10.0TxDb.Mmusculus.UCSC.mm9.knownGene3.2.2
TxDb.Rnorvegicus.UCSC.rn4.ensGene3.2.2tximeta1.20.3
tximport1.30.0tximportData1.30.0
TypeInfo1.68.0tzdb0.4.0
UCell2.6.2ucminf1.2.1
Ularcirc1.20.0umap0.2.10.0
UMI4Cats1.12.0uncoverappLib1.12.0
UNDO1.44.0unifiedWMWqPCR1.38.0
UniProt.ws2.42.0uniqtag1.0.1
Uniquorn2.22.0units0.8-5
universalmotif1.20.0unmarked1.4.1
updateObject1.6.0UpSetR1.4.0
urca1.3-3urlchecker1.0.1
urltools1.7.3usethis2.2.3
uSORT1.28.0utf81.2.4
uuid1.2-0uwot0.1.16
V84.4.2VAExprs1.8.0
valr0.7.0VAM1.1.0
VanillaICE1.64.1VarCon1.10.0
VarfromPDB2.2.10varhandle2.0.6
variancePartition1.32.5VariantAnnotation1.48.1
VariantExperiment1.16.0VariantFiltering1.38.0
VariantTools1.44.0varSelRF0.7-8
VaSP1.14.0vbmp1.70.0
vcd1.4-12VCFArray1.18.0
vcfR1.15.0vctrs0.6.5
VDJdive1.4.0VegaMC3.40.0
vegan2.6-4velociraptor1.12.0
veloviz1.8.0venn1.12
VennDetail1.18.0VennDiagram1.7.3
verification1.42VERSO1.12.0
VGAM1.1-10vidger1.22.0
VIM6.2.2vioplot0.4.0
viper1.36.0vipor0.4.7
viridis0.6.5viridisLite0.4.2
visdat0.6.0ViSEAGO1.16.0
visNetwork2.1.2vissE1.10.0
Voyager1.4.0VplotR1.12.1
vroom1.6.5vsclust1.4.0
vsn3.70.0vtpnet0.42.0
vulcan1.24.0waddR1.16.0
waffle1.0.2waiter0.2.5
waldo0.5.2warp0.2.1
wateRmelon2.8.0wavClusteR2.36.0
waveslim1.8.4wavethresh4.7.2
wdm0.2.4weaver1.68.0
webbioc1.74.0webchem1.3.0
webshot0.5.5webutils1.2.0
weitrix1.14.0wesanderson0.3.7
WGCNA1.72-5wheatmap0.2.0
whisker0.4.1widgetTools1.80.0
wiggleplotr1.26.0withr3.0.0
wk0.9.1word2vec0.4.0
wordcloud2.6wordcloud20.2.1
wpm1.12.0wppi1.10.0
Wrench1.20.0writexl1.5.0
WriteXLS6.5.0wrswoR1.1.1
xcms4.0.2xcore1.6.0
XDE2.48.0Xeva1.18.0
xfun0.42xgboost1.7.7.1
XINA1.20.0xmapbridge1.60.0
XML3.99-0.16.1xml21.3.6
XML2R0.0.6xmlparsedata1.0.5
XNAString1.10.0xopen1.0.0
xtable1.8-4XtraSNPlocs.Hsapiens.dbSNP144.GRCh370.99.12
xts0.13.2XVector0.42.0
yaImpute1.0-34yaml2.3.8
yamss1.28.0YAPSA1.28.0
yardstick1.3.0yarn1.28.0
yeastCC1.42.0yeastExpData0.48.0
yesno0.1.2yulab.utils0.1.4
zCompositions1.5.0-3zeallot0.1.0
zellkonverter1.12.1zenith1.4.2
zFPKM1.24.0zinbwave1.24.0
zip2.3.1zlibbioc1.48.2
zoo1.8-12ZygosityPredictor1.2.0

Linux SFTP Server

After the virtual machine is started, you can access the SFTP Server through FileZilla.

Username and password

The default username is elm and the password is the last 12 digits of the vmId.

main page

FileZilla

Steps to connect to the Linux SFTP Server

Install FileZilla

FileZilla can be downloaded here

Connect to the SFTP Server

  • Host: sftp://public_address (like sftp://54.146.32.239)
  • Username: elm
  • Password: the last 12 digits of the vmId. The vmId can be found in the JSON View with the form of 1f61b751-037a-489e-8638-3fc32fe6894d. Only the last 12 digits 3fc32fe6894d are used as the password.
  • Port: 2222

main page

Selecting "Always trust this host, add this key to the cache" will avoid showing this message.

main page

Once the server is connected, the directory share is used to exchange files.

main page

Location of shared folder

On the server, the shared folder is /data/elm/share.

Getting password

Azure VM console

The json view can be reached from the VM console.

azure_json_view

JSON View

The password is the last 12 digits of the vmId.

azure_sftp_password

The VM for the virus scan API server using ClamAV is a pre-configured Virtual Machine Image designed to facilitate the setup and deployment of an API server for performing virus scans on data files. It includes the ClamAV antivirus software, which is a powerful and widely used open-source solution for detecting and mitigating malware threats.

It provides a streamlined environment for developers to integrate virus scanning capabilities into their applications or systems. With this server, users can quickly develop a reliable virus scan solution, ensuring the protection of their files and data from potential malware infections.

ClamAV AntiVirus

ClamAV is an open-source antivirus software designed to detect and protect against a wide range of malware threats on Unix-based systems, including Linux, macOS, and BSD. It is one of the most widely used antivirus solutions for servers and network-based security applications. ClamAV is highly regarded for its effectiveness in identifying viruses, trojans, worms, and other malicious software, making it a crucial tool in safeguarding critical systems from potential threats.

ClamAV operates on a signature-based detection method, where it maintains an extensive database of virus signatures and patterns that are regularly updated to stay current with emerging threats. This enables ClamAV to efficiently scan files, directories, and emails for known malicious code and promptly flag any suspicious activity. Additionally, it offers the option to integrate with various mail servers and web applications, providing real-time scanning and protection.

What sets ClamAV apart is its open-source nature, which fosters a robust community of developers and contributors continuously working to improve its capabilities. This collaborative approach ensures that ClamAV remains a reliable and up-to-date antivirus solution, freely available to the broader community. Whether used as a standalone antivirus or in conjunction with other security tools, ClamAV offers essential protection for systems vulnerable to malware attacks.

Security Consideration

To enhance security, it is highly recommended to disable the public IP address associated with the instance. This measure helps restrict access to the API Server and mitigates potential risks.

Network Consideration

It is suggested to deploy this server within the same availability zone as your existing infrastructure to minimize data transfer charges. By colocating the virus scan server and your other resources in the same availability zone, you can leverage the low-cost or free data transfer within the same zone. And it ensures that the virus scan API server operates within the same network environment as your infrastructure, enabling faster and more efficient communication while minimizing data transfer costs.

Performance Consideration

Ensure optimal performance by a virtual machine with a minimum of 2 CPUs and 4 GB RAM for seamless operation of the API server.

Cross-Machine File Scanning

If you need to scan files residing on different machines, you can utilize the NFS server enabled on the API server. Here's how:

  • Create a directory on your local machine to store the data you want to scan. For example:

    mkdir /tmp/data-to-scan

  • Mount the NFS shared directory from your Virus Scan Server to your local machine using this command:

    sudo mount -t nfs api-server-ip-address:/elm/shared /tmp/data-to-scan

  • Any files stored in /tmp/data-to-scan on your local machine can be accessed and scanned by the Virus Scan Server via http://api-server-ip-address:8080/api/clamav/scan/file

The NFS client can be installed using

sudo apt install nfs-common

and

sudo yum install nfs-utils

for ubuntu-like and amazon-linux-like operating systems, respectively.

Scan a local file on the API Server

After starting the virtual machine, you can access the API Server using its IP address and the port 8080. For instance, if the IP address is 172.31.39.37, you can perform file scans by making requests to http://172.31.39.37:8080/api/clamav/scan/file.

curl -d '{"file": "/tmp/test.txt"}' -H 'Content-Type: application/json' http://172.31.39.37:8080/api/clamav/scan/file

The virus scan API Server is configured to listen on the local address 127.0.0.1:3000. To initiate a virus scan, you can send an HTTP request to http://127.0.0.1:3000/api/clamav/scan/file if the request originates from within the virus scan API server.

Response

A json format string will be returned. The possible return codes are 0, 1, 2, and 99.

  • Clean:
{"code":0,"message":"OK"}
  • Infected: For example, when Eicar-Signature is identified, the response would be
{"code":1,"message":"Eicar-Signature FOUND"}
  • Scan Errors: For example, when having file access error, the response would be
{"code":2,"message":"Can't access file /tmp/test/file"}
  • Other Errors: For example, when the API endpoint is not available , the response would be
{"code":99,"message":"Handler Not Found"}

Shell

curl -d '{"file": "/tmp/test"}' -H 'Content-Type: application/json' http://172.31.39.37:8080/api/clamav/scan/file

Python

import requests
import json

def elm_scan_file(url, file):
    # Define the payload as a dictionary
    payload = {
		"file": file
	}

    # Set the headers
    headers = {
        "Content-Type": "application/json"
    }

    # Send a POST request to the API endpoint
    response = requests.post(url, data=json.dumps(payload), headers=headers)

    # Check the response status code
    if response.status_code == 200:
        # Request was successful
        data = response.json()  # Extract the JSON data from the response
        return data
    else:
        # Request was not successful
        print(f"Request failed with status code: {response.status_code}")
        return None

if __name__ == '__main__':        
    result = elm_scan_file(
        url = "http://172.31.39.37:8080/api/clamav/scan/file", \
        file = '/tmp/virus_test.txt')
    
    if result:
        print(result)
        print(result['code'])
        print(result['message'])

JavaScript

const axios = require('axios');

async function elmScanFile(url, file) {
  try {
    const payload = {
	  file
    };

    const headers = {
      'Content-Type': 'application/json',
    };

    const response = await axios.post(url, payload, { headers });

    if (response.status === 200) {
      return response.data;
    } else {
      console.log(`Request failed with status code: ${response.status}`);
      return null;
    }
  } catch (error) {
    console.error('An error occurred:', error.message);
    return null;
  }
}

async function main() {
  const url = 'http://172.31.39.37:8080/api/clamav/scan/file';
  const file = '/tmp/virus_test.txt';

  const result = await elmScanFile(url, file);

  if (result) {
    console.log(result);
    console.log(result.code);
    console.log(result.message);
  }
}

main();

Dart

import 'dart:convert';
import 'package:http/http.dart' as http;

Future<Map<String, dynamic>?> elmScanFile(String url, String file) async {
  try {
    final payload = {
      'file': file
    };

    final headers = {
      'Content-Type': 'application/json',
    };

    final response = await http.post(Uri.parse(url), headers: headers, body: jsonEncode(payload));

    if (response.statusCode == 200) {
      return jsonDecode(response.body);
    } else {
      print('Request failed with status code: ${response.statusCode}');
      return null;
    }
  } catch (error) {
    print('An error occurred: $error');
    return null;
  }
}

void main() async {
  final url = 'http://172.31.39.37:8080/api/clamav/scan/file';
  final file = '/tmp/virus_test.txt';

  final result = await elmScanFile(url, file);

  if (result != null) {
    print(result);
    print(result['code']);
    print(result['message']);
  }
}

Go

package main

import (
	"bytes"
	"encoding/json"
	"fmt"
	"io/ioutil"
	"net/http"
)

func elmScanFile(url string, file string) (map[string]interface{}, error) {
	payload := map[string]interface{}{
		"file":    file
	}

	payloadBytes, err := json.Marshal(payload)
	if err != nil {
		return nil, err
	}

	req, err := http.NewRequest("POST", url, bytes.NewBuffer(payloadBytes))
	if err != nil {
		return nil, err
	}

	req.Header.Set("Content-Type", "application/json")

	client := &http.Client{}
	resp, err := client.Do(req)
	if err != nil {
		return nil, err
	}
	defer resp.Body.Close()

	respBody, err := ioutil.ReadAll(resp.Body)
	if err != nil {
		return nil, err
	}

	if resp.StatusCode == http.StatusOK {
		var data map[string]interface{}
		err = json.Unmarshal(respBody, &data)
		if err != nil {
			return nil, err
		}
		return data, nil
	} else {
		return nil, fmt.Errorf("Request failed with status code: %d", resp.StatusCode)
	}
}

func main() {
	url := "http://172.31.39.37:8080/api/clamav/scan/file"
	file := "/tmp/virus_test.txt"

	result, err := elmScanFile(url, file)
	if err != nil {
		fmt.Println("An error occurred:", err)
		return
	}

	if result != nil {
		fmt.Println(result)
		fmt.Println(result["code"])
		fmt.Println(result["message"])
	}
}

Version 1.1.0.1

Applied security patching and Enabled NSF Server such that the API server can be used to scan the files on other machines.

With this new feature, implementing it into your existing application is straightforward. Here's how you can do it:

  • Install the NFS client on your virtual machine.

  • Mount the shared folder, /elm/shared, located on the API Server, to your existing VM instance. You can choose a destination directory for this, for example, /tmp/data-to-scan.

  • Once the folder is mounted, any files placed into /tmp/data-to-scan can be seamlessly scanned using the API Server, as if these files were stored locally in the /elm/shared folder on the API Server.

API endpoints

  • http://ip-address:8080/api/clamav/scan/file

The VPN Server with Web GUI Admin is powered by OpenVPN which provides secure and encrypted communication channels, ensuring seamless connectivity and privacy for users across networks.

Once the virtual machine is deployed, a VPN client elm is created and the certificate can be downloaded through the web admin panel where more clients can be created.

You can access the admin panel with its public IP address. The default username is elm and the password is the last 12 digits of the vmId. The vmId can be found in the JSON View with the form of 1f61b751-037a-489e-8638-3fc32fe6894d. Only the last 12 digits 3fc32fe6894d are used as the password.

Download and install OpenVPN Client from https://openvpn.net/client/

Access the web admin

You can access the admin panel with its public IP address. The default username is elm and the password is the last 12 digits of the vmId. The vmId can be found in the JSON View with the form of 1f61b751-037a-489e-8638-3fc32fe6894d. Only the last 12 digits 3fc32fe6894d are used as the password.

main page

Enter the web admin to download the certificate

main page

Download and install OpenVPN Client from https://openvpn.net/client/

Import the downloaded certificate

Connect to the VPN server

Connection status

Check the VPN status by accessing https://www.showmyip.com/

main page

Create new VPN client

main page

main page

Check the newly created client and download the certificate

main page

Revoke a client certificate

main page

When a new IP address (53.80.91.153) is assigned to the VPN server, the client profile needs to be updated.

After the virtual machine is started, you can access the RStudio Server with its public IP address. For example, if the IP address is 10.11.12.13, typing http://10.11.12.13 in the browser will bring you to the following startup page:

main page

The default username is ruser and the password is the instance id.

RStudio Server

    R: 4.4.2

    rstudio-server: 2024.04.2-764

    OS: Ubuntu 24.04

Release Notes

Installed R 4.4.2 and R packages supporting various domains.

This AMI provides thousands of R packages covering various domains such as data science, machine learning, economitrics, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, reproducible research, phylogenetics, web technologies, hydrology, sports analytics, natural language processing, actuarial science, optimization, genomics, proteomics, metabolomics, transcriptomics, and other omics.

R packages (4319)

packageversionpackageversion
abc2.2.1abc.data1.1
ABCoptim0.15.0abcrf1.9
abglasso0.1.1abind1.4-8
abtest1.0.1accrualPlot1.0.7
acebayes1.10acepack1.4.2
ACNE0.9.1acnr1.0.0
acp2.1acs2.1.4
ACSWR1.0ActivePathways2.0.5
actuar3.3-4actuaRE0.1.5
ActuarialM0.1.0actuaryr1.1.1
actxps1.5.0ada2.0-5
adagio0.9.2adaptivetau2.3-2
adaptMCMC1.5adaptr1.4.0
ADAPTS1.0.22adaptsmoFMRI1.2
adaptTest1.2additivityTests1.1-4.2
ade41.7-22ade4TkGUI0.3-1
adegenet2.1.10adegraphics1.0-21
adehabitatHR0.4.22adehabitatHS0.3.18
adehabitatLT0.3.28adehabitatMA0.3.17
adephylo1.1-16adespatial0.3-24
ADGofTest0.3adimpro0.9.7.2
adiv2.2.1adjclust0.6.10
adlift1.4-5admisc0.36
AdMit2.1.9ads1.5-10
AdvancedBasketballStats1.0.1AER1.2-14
affy1.84.0affyio1.76.0
africamonitor0.2.4agricolae1.3-7
agricolaeplotr0.5.0agridat1.24
agriwater1.0.2agvgd0.1.2
AhoCorasickTrie0.1.2aion1.1.0
airGR1.7.6airGRdatasets0.2.1
airGRdatassim0.1.3airGRiwrm0.7.0
airGRteaching0.3.3airports0.1.0
airr1.5.0ajv1.0.0
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svglite2.1.3svGUI1.0.1
svrep0.6.4svs3.1.1
svUnit1.0.6swagger5.17.14.1
sweep0.2.5swephR0.3.1
SwimmeR0.14.2swirl2.4.5
swirlify0.5.3switchr0.14.8
SWTools1.1.0sylly0.1-6
sym.arma1.0symengine0.2.6
symmoments1.2.1synchronicity1.3.10
SYNCSA1.3.4Synth1.1-8
synthACS1.7.1synthesis1.2.5
SynthETIC1.1.0synthpop1.8-0
sys3.4.3sysfonts0.8.9
systemfit1.1-30systemfonts1.1.0
table11.4.3tables0.9.31
tabnet0.6.0tabulapdf1.0.5-3
tabuSearch1.1.1TAF4.2.0
tagcloud0.6TailRank3.2.2
TAM4.2-21tanaka0.4.0
TAQMNGR2018.5-1targets1.8.0
tau0.0-26tbea1.5.0
TBRDist1.0.2tbrf0.1.5
TCA1.2.1TCGAbiolinks2.34.0
TCGAbiolinksGUI.data1.26.0TCGAretriever1.9.1
TcGSA0.12.10tcltk21.2-11
Tcomp1.0.1tdigest0.4.2
TeachingDemos2.13teamcolors0.0.4
telegram.bot3.0.0tempdisagg1.1.1
tensor1.5tensorA0.36.2.1
tensorflow2.16.0tensorMiss1.1.1
TensorPreAve1.1.0tensorTS1.0.2
TEQR6.0-0tergm4.2.1
Ternary2.3.3terra1.7-83
terrainr0.7.5TESS2.1.2
tesseract5.2.2testcorr0.2.0
TestDataImputation2.3TestDesign1.7.0
tester0.2.0TestFunctions0.2.2
testit0.13TestScorer1.7.2
testthat3.2.1.1TexExamRandomizer1.2.7
texreg1.39.4text2vec0.6.4
textcat1.0-8textir2.0-5
textplot0.2.2textrank0.3.1
textreuse0.1.5textshaping0.4.0
textTinyR1.1.8textutils0.4-1
tfarima0.3.2tfautograph0.3.2
tfdatasets2.17.0tfhub0.8.1
tfio0.4.1TFisher0.2.0
tframe2015.12-1.1tfruns1.5.3
tgp2.4-23TGS1.0.1
TH.data1.1-2theft0.6.3
theftdlc0.1.2thief0.3
ThreeGroups0.21threejs0.3.3
ThreeWay1.1.3thurstonianIRT0.12.5
tibble3.2.1tibbletime0.1.8
tictoc1.2.1Tides2.1
tidyBdE0.3.7tidycensus1.6.7
tidychangepoint0.0.1tidyestimate1.1.1
tidygraph1.3.1tidyhydat0.7.0
tidyLPA1.1.0tidymodels1.2.0
tidyquant1.0.9tidyr1.3.1
tidyREDCap1.1.2tidyRSS2.0.7
tidyselect1.2.1tidySEM0.2.7
tidysynth0.2.0tidyterra0.6.1
tidytext0.4.2tidytree0.4.6
tidyverse2.0.0tidyvpc1.5.1
tiff0.1-12tigris2.1
tikzDevice0.12.6timechange0.3.0
timeDate4041.110timeSeries4041.111
timeseriesdb1.0.0-1.1.2timetk2.9.0
timsac1.3.8-4tinyarray2.4.2
tinyProject0.6.1tinytable0.5.0
tinytex0.54tis1.39
tkrplot0.0-27tkWidgets1.84.0
TLMoments0.7.5.3tm0.7-14
tm.plugin.alceste1.1.1tm.plugin.dc0.2-10
tm.plugin.europresse1.4tm.plugin.factiva1.8
tm.plugin.lexisnexis1.4.1tmap3.3-4
tmaptools3.1-1TMB1.9.15
Tmisc1.0.1tmod0.50.13
tmvnsim1.0-2tmvtnorm1.6
tnet3.0.16tokenizers0.3.0
tokenizers.bpe0.1.3topicdoc0.1.1
topicmodels0.2-17topicmodels.etm0.1.0
topmodel0.7.5topologyGSA1.5.0
toprdata1.0.2torch0.13.0
torchaudio0.3.1.9000torchdatasets0.3.1
torchvision0.6.0tpr0.3-3
tracerer2.2.3trackdem0.7.2
trackdf0.3.3trackdown1.1.1
trackeR1.6.0trackeRapp1.2
TrackReconstruction1.3tractor.base3.4.2
traipse0.3.0trajectories0.2-9
TrajectoryUtils1.14.0trajr1.5.1
transformr0.1.5transfR1.0.11
TransPhylo1.4.5transport0.15-4
trapezoid2.0-2traudem1.0.3
tree1.0-43treebalance1.2.0
treebase0.1.5TreeBUGS1.5.0
treedater0.5.0TreeDist2.9.1
treefit1.0.2treeio1.30.0
treemap2.4-4TreeSearch1.5.1
TreeSim2.4treespace1.1.4.3
TreeTools1.12.0trend1.1.6
trendeval0.1.0trending0.1.0
TrialSize1.4triangle1.0
triebeard0.4.1trimcluster0.1-5
trip1.10.0tripack1.3-9.2
tripEstimation0.0-46TripleR1.5.4
TruncatedNormal2.3truncdist1.0-2
truncnorm1.0-9truncreg0.2-5
trust0.1-8trustOptim0.8.7.3
tryCatchLog1.3.1TSA1.3.1
TSANN0.1.0tsbox0.4.2
tsBSS1.0.0TSCAN1.44.0
TSclust1.3.1tscount1.4.3
tsdataleaks2.1.1tsdb1.1-0
tsdecomp0.2TSdeeplearning0.1.0
tsdisagg20.1.0TSdisaggregation2.0.0
TSdist3.7.1tsdistributions1.0.2
tsDyn11.0.5.2TSEAL0.1.3
TSEntropies0.9tseries0.10-58
tseriesChaos0.1-13.1tseriesEntropy0.7-2
tseriesTARMA0.5-1tsfeatures1.1.1
tsfknn0.6.0tsgarch1.0.3
tsgc0.0tsibble1.1.5
tsibbledata0.4.1tsibbletalk0.1.0
tsintermittent1.10tsiR0.4.3
TSLSTM0.1.0TSLSTMplus1.0.5
tsmethods1.0.2tsModel0.6-2
tsne0.1-3.1tsnet0.1.0
tsoutliers0.6-10TSP1.2-4
tsPI1.0.4TSrepr1.1.0
tsrobprep0.3.2tssim0.1.7
TSstudio0.1.7tstests1.0.1
TSTutorial1.2.7tsutils0.9.4
tswge2.1.0tth4.16-0
TTR0.24.4tufterhandout1.2.1
tune1.2.1TUWmodel1.1-1
tvm0.5.2twdtw1.0-1
tweedie2.3.5tweenr2.0.3
twosamples2.0.1TxDb.Hsapiens.UCSC.hg19.knownGene3.2.2
TxDb.Hsapiens.UCSC.hg38.knownGene3.20.0tximport1.34.0
txtq0.2.4tzdb0.4.0
uaparserjs0.3.5ubiquity2.0.3
ucminf1.2.2UComp5.0.4
UCSC.utils1.2.0udpipe0.8.11
ufRisk1.0.7ugatsdb0.2.3
uGMAR3.5.0umap0.2.10.0
uncmbb0.2.2unglue0.1.0
UnifiedDoseFinding0.1.10unifir0.2.4
units0.8-5univOutl0.4
unrepx1.0-2unrtf1.4.7
UpSetR1.4.0uptasticsearch0.4.0
urca1.3-4urlchecker1.0.1
urlshorteneR1.5.7urltools1.7.3
uroot2.1-3usdata0.3.1
usethis3.0.0usmap0.7.1
usmapdata0.3.0utf81.2.4
utility1.4.6uuid1.2-1
uwot0.2.2V86.0.0
VALERIE1.1.0validate1.1.5
validatetools0.5.2valr0.8.2
VAM1.1.0vapour0.10.0
VAR.etp1.1varbvs2.6-10
VARDetect0.1.8vardiag0.2-1
vardpoor0.20.1VaRES1.0.2
vars1.6-1VARshrink0.3.1
varycoef0.3.4VCA1.5.1
vcd1.4-13vcdExtra0.8-5
vcr1.6.0vctrs0.6.5
vdg1.2.3VedicDateTime0.1.9
vegan2.6-8vegawidget0.5.0
vegperiod0.4.0VennDiagram1.7.3
venneuler1.1-4VGAM1.1-12
VGAMdata1.1-12vglmer1.0.5
vhica0.2.8VIC50.2.6
VIM6.2.2VineCopula2.5.1
vines1.1.5vip0.4.1
viridis0.6.5viridisLite0.4.2
visNetwork2.1.2visualize4.5.0
vkR0.2volatilityTrader1.0.1
volcano3D2.0.9volleystat0.2.0
vpc1.2.2vroom1.6.5
vrtest1.2vsn3.74.0
W3CMarkupValidator0.1-7waiter0.2.5
waldo0.5.3warp0.2.1
washdata0.1.4WASP1.4.4
waterData1.0.8waterquality1.0.0
WaveletComp1.1wavelets0.3-0.2
waveslim1.8.5wavethresh4.7.3
wavScalogram1.1.3waywiser0.6.0
wbs1.4wbstats1.0.4
wCorr1.9.8WDI2.7.8
wdm0.2.4wdman0.2.6
weatherOz1.0.0WebAnalytics0.9.12
webchem1.3.0webdriver1.0.6
WebGestaltR0.4.6webmockr1.0.0
webreadr0.4.0webshot0.5.5
webshot20.1.1websocket1.4.2
webutils1.2.2wehoop2.1.0
WeightedPortTest1.1WeightIt1.3.1
weights1.0.4welo0.1.4
WeMix4.0.3WGCNA1.73
WH1.1.2whisker0.4.1
whitebox2.4.0whitening1.4.0
whoami1.3.0widgetframe0.3.1
widgetTools1.84.0WikidataQueryServiceR1.0.0
WikidataR2.3.3WikipediR1.7.1
wikitaxa0.4.0wildlifeDI1.0.0
wilson2.4.2windex2.0.8
wINEQ1.2.1withr3.0.2
wk0.9.4wktmo1.0.5
wkutils0.1.3wnl0.8.1
wooldridge1.4-3worcs0.1.15
word2vec0.4.0wordcloud2.6
wordnet0.1-17workflowr1.7.1
workflows1.1.4workflowsets1.1.0
worldfootballR0.6.2worldmet0.9.8
worrms0.4.3wpp20171.2-3
wpp20191.1-1wql1.0.1
WrightMap1.4writexl1.5.1
WriteXLS6.7.0wrMisc1.15.2
wrProteo1.12.0WRSS3.1
wrswoR1.1.1WRTDStidal1.1.4
WufooR1.0.1x121.10.3
x13binary1.1.61xaringan0.30
XBRL0.99.19.1xfun0.49
xgboost1.7.8.1xgxr1.1.2
XLConnect1.1.0xlsx0.6.5
xlsxjars0.6.1XML3.99-0.17
xml21.3.6XML2R0.0.8
xmlrpc21.1xopen1.0.1
xplain0.2.2xpose0.4.18
xpose.nlmixr20.4.0xpose44.7.3
xslt1.4.6xtable1.8-4
xts0.14.1XVector0.46.0
xxIRT2.1.2yaImpute1.0-34.1
yaml2.3.10yardstick1.3.1
yesno0.1.3yhatr0.15.1
ympes1.6.0yorkr0.0.42
ypssc1.1.0yuima1.15.27
yulab.utils0.1.7zeallot0.1.0
zen4R0.10zic0.9.1
ZIM1.1.0ZINARp0.1.0
zip2.3.1zipfR0.6-70
zlib1.0.3zlibbioc1.52.0
zoo1.8-12ZRA0.2
ztable0.2.3zTree1.0.7
zyp0.11-1

Set up JupyterHub Server

Default user: jhub-admin

Please sign up and set your password for jhub-admin when you start the server for the first time. Different from regular users, jhub-admin is automatically authorized to log in after the password is created.

http is supported out of box.

If https is desired, please send your request to support@elmcomputing.io

Startup page

After the instance is started, you can access the JupyterHub Server with its public IP address. For example, if the IP address is 10.11.12.13, typing http://10.11.12.13 in the browser will bring you to the following startup page:

main page

Sign-up page

When the JupyterHub Server is activated, a default user "jhub-admin" is created. The first time you access the server, a password need to be set for "jhub-admin".

main page

jupyterlab

main page

Authorize page

When creating new users, an authorization step is needed at "http://10.11.12.13/hub/authorize"

main page

Change password

The password can be changed at "http://10.11.12.13/hub/change-password"

main page

Python version: 3.11

Python packages

packageversionpackageversion
absl-py2.1.0alembic1.14.0
altair5.5.0annotated-types0.7.0
anyio4.6.2.post1argon2-cffi23.1.0
argon2-cffi-bindings21.2.0arrow1.3.0
arviz0.20.0asgiref3.8.1
asttokens2.4.1astunparse1.6.3
async-lru2.0.4attrs24.2.0
Automat24.8.1babel2.16.0
bayesian-optimization2.0.0bcrypt4.2.1
beautifulsoup44.12.3black24.10.0
bleach6.2.0blinker1.9.0
blis1.0.1bokeh3.6.1
Boruta0.4.3Bottleneck1.4.2
branca0.8.0cachetools5.5.0
catalogue2.0.10catboost1.2.5
certifi2024.8.30certipy0.2.1
cffi1.17.1charset-normalizer3.4.0
click8.1.7cloudpathlib0.20.0
cloudpickle3.1.0cmake3.31.1
cmdstanpy1.2.4colorama0.4.6
colorlog6.9.0colorlover0.3.0
comm0.2.2confection0.1.5
constantly23.10.4contourpy1.3.1
coverage7.6.8cryptography43.0.3
cssselect1.2.0cufflinks0.17.3
cycler0.12.1cymem2.0.10
Cython3.0.11dash2.9.3
dash-core-components2.0.0dash-html-components2.0.0
dash-table5.0.0dask2024.11.2
databricks-sdk0.38.0datascience0.17.6
deap1.4.1debugpy1.8.9
decorator5.1.1defusedxml0.7.1
Deprecated1.2.15dill0.3.9
Django5.1.3dm-tree0.1.8
docker7.1.0eli50.13.0
executing2.1.0facets1.1.0
fairlearn0.11.0fastapi0.115.5
fastjsonschema2.20.0fastprogress1.0.3
filelock3.16.1flake87.1.1
Flask3.1.0flatbuffers24.3.25
folium0.18.0fonttools4.55.0
fqdn1.5.1fsspec2024.10.0
funcy2.0future1.0.0
gast0.6.0gensim4.3.2
geopandas1.0.1gitdb4.0.11
GitPython3.1.43google-auth2.36.0
google-pasta0.2.0graphene3.4.3
graphql-core3.2.5graphql-relay3.2.0
graphviz0.20.3greenlet3.1.1
grpcio1.68.0gunicorn23.0.0
h110.14.0h5netcdf1.4.1
h5py3.12.1hdbscan0.8.40
holidays0.61html5lib1.1
htmlmin0.1.12httpcore1.0.7
httpx0.27.2huggingface-hub0.26.2
hyperlink21.0.0hyperopt0.2.7
idna3.10ImageHash4.3.1
imageio2.36.0imbalanced-learn0.12.4
imblearn0.0importlib_metadata8.5.0
importlib_resources6.4.5incremental24.7.2
iniconfig2.0.0ipykernel6.29.5
ipytablewidgets0.3.2ipython8.29.0
ipywidgets8.1.5isoduration20.11.0
isort5.13.2itemadapter0.9.0
itemloaders1.3.2itsdangerous2.2.0
jedi0.19.2Jinja23.1.4
jmespath1.0.1joblib1.4.2
json50.9.28jsonpointer3.0.0
jsonschema4.23.0jsonschema-specifications2024.10.1
jupyter1.1.1jupyter-console6.6.3
jupyter-events0.10.0jupyter-lsp2.2.5
jupyter_client8.6.3jupyter_core5.7.2
jupyter_server2.14.2jupyter_server_terminals0.5.3
jupyterhub5.2.1jupyterhub-nativeauthenticator1.3.0
jupyterlab4.3.1jupyterlab_pygments0.3.0
jupyterlab_server2.27.3jupyterlab_widgets3.0.13
keras3.6.0keras-tuner1.4.7
kiwisolver1.4.7kmodes0.12.2
kt-legacy1.0.5langcodes3.5.0
language_data1.3.0lazy_loader0.4
libclang18.1.1lightgbm4.5.0
lime0.2.0.1lit18.1.8
llvmlite0.43.0locket1.0.0
lucid0.3.8lxml5.3.0
lz44.3.3Mako1.3.6
marisa-trie1.2.1Markdown3.7
markdown-it-py3.0.0MarkupSafe3.0.2
matplotlib3.9.2matplotlib-inline0.1.7
matplotlib-venn1.1.1mccabe0.7.0
mdurl0.1.2missingno0.5.2
mistune3.0.2ml-dtypes0.4.1
mlflow2.18.0mlflow-skinny2.18.0
mlpack4.5.0mlxtend0.23.3
more-itertools10.5.0mpld30.5.10
mpmath1.3.0multimethod1.4
murmurhash1.0.11mxnet1.0.0.post1
mypy-extensions1.0.0namex0.0.8
narwhals1.14.2nbclient0.10.0
nbconvert7.16.4nbformat5.10.4
nest-asyncio1.6.0networkx3.4.2
nibabel5.3.2nilearn0.10.4
nltk3.9.1notebook7.0.7
notebook_shim0.2.4numba0.60.0
numexpr2.10.2numpy2.0.2
nvidia-cublas-cu1111.10.3.66nvidia-cuda-cupti-cu1111.7.101
nvidia-cuda-nvrtc-cu1111.7.99nvidia-cuda-runtime-cu1111.7.99
nvidia-cudnn-cu118.5.0.96nvidia-cufft-cu1110.9.0.58
nvidia-curand-cu1110.2.10.91nvidia-cusolver-cu1111.4.0.1
nvidia-cusparse-cu1111.7.4.91nvidia-nccl-cu112.14.3
nvidia-nccl-cu122.23.4nvidia-nvtx-cu1111.7.91
oauthlib3.2.2onetimepass1.0.1
opencv-python4.10.0.84opentelemetry-api1.28.2
opentelemetry-sdk1.28.2opentelemetry-semantic-conventions0.49b2
opt_einsum3.4.0optree0.13.1
optuna4.1.0overrides7.7.0
packaging24.2pamela1.2.0
pandas2.2.3pandas-profiling3.0.0
pandocfilters1.5.1parsel1.9.1
parso0.8.4partd1.4.2
pathspec0.12.1patsy1.0.1
pexpect4.9.0phik0.12.4
pillow11.0.0platformdirs4.3.6
plotly5.24.1pluggy1.5.0
preshed3.0.9prometheus_client0.21.0
prompt_toolkit3.0.48prophet1.1.6
Protego0.3.1protobuf5.28.3
psutil6.1.0ptyprocess0.7.0
pure_eval0.2.3py4j0.10.9.7
pyarrow18.0.0pyasn10.6.1
pyasn1_modules0.4.1pycaret2.2.2
pycodestyle2.12.1pycparser2.22
pydantic2.10.1pydantic_core2.27.1
pydeck0.9.1PyDispatcher2.0.7
pydot3.0.2pyflakes3.2.0
Pygments2.18.0pyLDAvis3.4.1
pymc33.11.4pynndescent0.5.13
pyod2.0.2pyogrio0.10.0
PyOpenGL3.1.7pyOpenSSL24.2.1
pyparsing3.2.0pyproj3.7.0
pytest8.3.3pytest-cov6.0.0
python-dateutil2.9.0.post0python-json-logger2.0.7
pytz2024.2PyWavelets1.7.0
PyYAML6.0.2pyzmq26.2.0
queuelib1.7.0referencing0.35.1
regex2024.11.6requests2.32.3
requests-file2.1.0rfc3339-validator0.1.4
rfc3986-validator0.1.1rich13.9.4
rpds-py0.21.0rsa4.9
safetensors0.4.5scikit-base0.11.0
scikit-image0.24.0scikit-learn1.5.2
scikit-plot0.3.7scipy1.14.1
Scrapy2.12.0seaborn0.13.2
semver3.0.2Send2Trash1.8.3
service-identity24.2.0shap0.46.0
shapely2.0.6shellingham1.5.4
six1.16.0sktime0.34.0
slicer0.0.8smart-open7.0.5
smmap5.0.1sniffio1.3.1
soupsieve2.6spacy3.8.2
spacy-legacy3.0.12spacy-loggers1.0.5
SQLAlchemy2.0.36sqlparse0.5.2
srsly2.4.8stack-data0.6.3
stanio0.5.1starlette0.41.3
statsmodels0.14.4stopit1.1.2
streamlit1.40.1sympy1.13.3
tabulate0.9.0tangled-up-in-unicode0.1.0
tenacity9.0.0tensorboard2.18.0
tensorboard-data-server0.7.2tensorflow2.18.0
tensorflow-io-gcs-filesystem0.37.1tensorflow-probability0.25.0
termcolor2.5.0terminado0.18.1
textblob0.18.0.post0Theano-PyMC1.1.2
thinc8.3.2threadpoolctl3.5.0
tifffile2024.9.20tinycss21.4.0
tldextract5.1.3tokenizers0.20.3
toml0.10.2toolz1.0.0
torch2.0.1tornado6.4.2
TPOT0.12.2tqdm4.67.0
traitlets5.14.3transformers4.46.3
triton2.0.0Twisted24.10.0
typer0.13.1types-python-dateutil2.9.0.20241003
typing_extensions4.12.2tzdata2024.2
umap-learn0.5.7update-checker0.18.0
uri-template1.3.0urllib32.2.3
vega4.1.0visions0.7.1
w3lib2.2.1wasabi1.1.3
watchdog6.0.0wcwidth0.2.13
weasel0.4.1webcolors24.11.1
webencodings0.5.1websocket-client1.8.0
Werkzeug3.1.3widgetsnbextension4.0.13
wordcloud1.9.4wrapt1.17.0
xarray2024.11.0xarray-einstats0.8.0
xgboost2.1.2xyzservices2024.9.0
yellowbrick1.5zipp3.21.0
zope.interface7.1.1

Google Cloud Marketplace Standard EULA

VERSION: 2
DATED: January 27th, 2021

This Google Cloud Marketplace Standard EULA (this “Agreement”) is between the person or entity described as the provider of the Service on the Listing (“Elm Computing”) and the person or entity agreeing to these terms (“You” or “Customer”). This Agreement states the terms under which Vendor will provide the Service to You. By accessing or using the Service, You are agreeing to the terms of this Agreement (the date of such action, the “Effective Date”). If You are entering into this Agreement on behalf of an entity, then You represent and agree that You have the legal authority to bind that entity to this Agreement. If You do not accept the terms of this Agreement, then you cannot use the Service.

Google has made this Agreement available to help facilitate contracting between the Vendor and Customer. The parties acknowledge that (1) Google is not a party to this Agreement, (2) Google is not responsible for any of the parties’ actions, obligations, or liability under this Agreement, (3) the Agreement is made available “as-is” and “as available” without any warranty of any kind from Google, and (4) the parties’ use of this Agreement is at their own risk.

1. Applicability; Provision of the Service

1.1 Access and Use

During the Term and in accordance with this Agreement, Customer may access and use the Service solely for Customer’s internal business purposes.

1.2 Registration and Account

To use the Service, Customer will create an Account. Customer must provide complete and accurate information when creating the Account and keep the information complete and accurate at all times. Customer is responsible for (a) maintaining the security of its Account (for example, any applicable login credentials or security keys), (b) all activities that occur under Customer’s Account, and (c) any other actions taken in connection with Customer’s Account. Vendor and Vendor’s Affiliates are not responsible for unauthorized access to Customer’s Account. Customer will notify Vendor immediately if Customer believes there has been unauthorized access to or use of Customer’s Account.

1.3 Support

Vendor will provide support for the Service as provided in Vendor’s applicable support policy and in accordance with the level of support purchased by Customer (the “Support”).

1.4 Service Level Agreement

If specified for the Service on the Listing, Vendor will provide the Service in accordance with the applicable service level agreement. Not all services listed on the Marketplace include a service level agreement.

2. Customer Obligations

2.1 Restrictions

Customer will not, and will not allow any third party to:

  • (a) use the Service in violation of laws or regulations,
  • (b) use the Service to violate the rights of others,
  • (c) use the Service in high-risk, hazardous environments requiring fail-safe performance, including in the operation of nuclear facilities, aircraft navigation or control systems, air traffic control, or weapons systems, or any other application in which the failure of the Service could lead to severe physical or environmental damages,
  • (d) resell or sublicense the Service,
  • (e) disable or circumvent any aspects of the Service, including security mechanisms used by the Service, or attempt to do the same,
  • (f) use the Service to perform any malicious activity, including to violate the security or integrity of any network, computer or communications system, software application, or network or computing device,
  • (g) generate, distribute, publish or facilitate unsolicited mass email, promotions, advertisements or other solicitations,
  • (h) process or store any Customer Data that is subject to the International Traffic in Arms Regulations maintained by the Department of State,
  • (i) publish or provide any benchmark or comparison test results that pertain to the Service, or
  • (j) modify, adapt, or create a derivative work of the Service.

2.2 Applicable Law

Customer will comply with all laws, rules, and regulations applicable to Customer’s use of and access to the Service. Vendor will comply with all laws, rules, and regulations applicable to Vendor’s provision of the Service.

2.3 Enforcement

Vendor may, but has no obligation to:

  • (a) investigate any violation of this Section 2 (Customer Obligations) or misuse of the Service, and
  • (b) remove or modify any Customer Data, or disable access to any resource, that violates the foregoing.

2.4 Responsibility for Customer Data

Customer is responsible for the Customer Data, including the accuracy and completeness of such Customer Data, and any loss, liabilities or damages resulting from the Customer Data, regardless of the nature of the Customer Data. Customer is responsible for backing up or otherwise making duplicates of Customer Data. Customer is responsible for communicating with the Service through encrypted and authenticated connections, as may be required by Vendor, and for transmitting all Customer Data using appropriate security methods.

2.5 Protected Health Information

Customer will not store or process any Protected Health Information using the Service unless Customer has a Business Associate Agreement with Vendor.

2.6 Representations and Warranties

Customer represents and warrants that:

  • (a) it owns or has the necessary rights and licenses to provide the Customer Data to the Service; and
  • (b) the provision of the Customer Data to, and use of the Customer Data by, the Service as contemplated in this Agreement will not infringe any third party’s rights, including Intellectual Property Rights.

3. Data Processing

3.1 Use and Performance Data

Vendor may collect and analyze data regarding Customer’s use of the Service, excluding any personal data (“Performance Data”). Vendor may use this information for its own business purposes, including to maintain, operate, and improve the Service, monitor and analyze activities in connection with the Service, as well as to create anonymized statistics for Vendor’s own marketing purposes.

3.2 Data Processing Addendum

Unless a separate agreement covering the subject matter of this Agreement is entered into by the parties that specifically references the Data Processing Addendum, each party will comply with the Data Processing Addendum attached to this Agreement as Attachment 1. The Data Processing Addendum is incorporated into this Agreement by reference.

3.3 Security

Vendor will implement reasonable technical and organizational safeguards designed to protect Customer Data against unauthorized loss, destruction, alteration, access, or disclosure.

3.4 Use of Customer Data

Vendor will not access or use Customer Data except as necessary to provide the Service.

5. Payment

The parties agree that Customer’s sole payment obligations for the Service are contained in the GCP Marketplace Agreement. Customer may not use or access the Service if Customer does not comply with all of its payment obligations specified in the GCP Marketplace Agreement.

6. Confidential Information

6.1 Obligations

The recipient will not disclose the Confidential Information, except to Affiliates, employees, agents, or professional advisors who need to know it and who have agreed in writing (or in the case of professional advisors are otherwise bound) to keep it confidential. The recipient will ensure that those people and entities use the received Confidential Information only to exercise rights and fulfill obligations under this Agreement, while using reasonable care to keep it confidential.

6.2 Required Disclosure

Notwithstanding any provision to the contrary in this Agreement, the recipient may also disclose Confidential Information to the extent required by applicable Legal Process, provided that the recipient uses commercially reasonable efforts to:

  • (i) promptly notify the other party of such disclosure before disclosing, and
  • (ii) comply with the other party's reasonable requests regarding its efforts to oppose the disclosure.

Notwithstanding the foregoing, subsections (i) and (ii) above will not apply if the recipient determines that complying with (i) and (ii) could:

  • (a) result in a violation of Legal Process;
  • (b) obstruct a governmental investigation; or
  • (c) lead to death or serious physical harm to an individual.

As between the parties, Customer is responsible for responding to all third-party requests concerning its use of the Service.

7. Intellectual Property

7.1 Ownership

Except as expressly stated in this Agreement, this Agreement does not grant either party any rights, implied or otherwise, to the other's content or any of the other's Intellectual Property Rights. As between Customer and Vendor, Customer owns all Intellectual Property Rights in the Customer Data, and Vendor owns all Intellectual Property Rights in the Service.

7.2 Feedback

At its option, Customer may provide feedback and suggestions about the Service to Vendor (“Feedback”). If Customer provides Feedback, then Vendor and its Affiliates may use that Feedback without restriction and without obligation to Customer.

7.3 DMCA

Vendor provides information to help copyright holders manage their intellectual property online, but Vendor cannot determine whether something is being used legally without input from the copyright holders. Vendor will respond to notices of alleged copyright infringement and may terminate repeat infringers in appropriate circumstances as required to maintain safe harbor for online service providers under the U.S. Digital Millennium Copyright Act. If Customer believes a person or entity is violating Customer’s copyrights, Customer can notify Vendor at Vendor’s notice address described in Section 12.1 (Notices).

8. Warranties and Disclaimers

8.1 Mutual

Each party represents and warrants that:

  • (a) it has full power and authority to enter into the Agreement; and
  • (b) it will comply with all laws and regulations applicable to its provision, or use, of the Service, as applicable.

8.2 Vendor Performance Warranty

Vendor warrants that the Service will perform substantially in accordance with the Documentation. If Vendor is providing Support, Vendor warrants that it will perform the Support in a diligent and workmanlike manner consistent with industry standards.

8.3 Remedies

If the Service or Support fails to conform to the warranties in Section 8.2 (Vendor Performance Warranty), Vendor will promptly, at its option and expense, correct the Service and re-perform the Support as necessary to conform to the warranties. If Vendor does not correct the Service or re-perform the Support to conform to the warranties within a reasonable time, not to exceed 30 days, as Customer’s sole remedy and Vendor’s exclusive liability (except as provided in Section 10), Customer may terminate this Agreement without further liability and, if the Service was purchased on a subscription basis, Vendor will issue a refund to Customer of any fees prepaid by Customer, prorated for the unused portion of the subscription.

8.4 Disclaimer

Except as stated in this Section 8 (Warranties and Disclaimers), the Service and, if applicable, Support are provided on an “AS-IS” basis. To the fullest extent permitted by law, Vendor disclaims and this Agreement excludes any implied or statutory warranty, including any warranty of title, non-infringement, merchantability or fitness for a particular purpose. Vendor does not warrant that the Service will operate uninterrupted or error-free, or that all errors will be corrected.

After the virtual machine is started, you can access the RStudio Server with its public IP address. For example, if the IP address is 10.11.12.13, typing http://10.11.12.13 in the browser will bring you to the following startup page:

main page

The default username is ruser and the password is the instance id.

RStudio Server

R: 4.4.0

rstudio-server: 2023.12.0+369

Release Notes

  • Upgraded R to version 4.4.0 and all R packages to their latest versions.

  • Enabled HTTPS to Improve Security: HTTPS has been enabled to ensure that all data between your browser and our servers is encrypted.

  • Automatic Redirect from HTTP to HTTPS: All HTTP traffic is now automatically redirected to HTTPS, ensuring that all communications between your browser and our servers are encrypted and secure.

  • Self-Signed Certificate: Please note that the HTTPS connection uses a self-signed certificate. When accessing the site for the first time, you may need to accept the self-signed certificate in your browser to proceed. This step is necessary to establish a secure connection.

  • IP Address Changes: If the IP address changes, a new self-signed certificate will be generated. You may need to accept the new certificate in your browser to re-establish a secure connection.

R: 4.4.0; rstudio-server: 2023.12.0+369

This AMI provides thousands of R packages covering various domains such as data science, machine learning, economitrics, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, reproducible research, phylogenetics, web technologies, hydrology, sports analytics, natural language processing, actuarial science, optimization, genomics, proteomics, metabolomics, transcriptomics, and other omics.

R packages (4274)

packageversionpackageversion
abc2.2.1abc.data1.1
ABCoptim0.15.0abcrf1.9
abglasso0.1.1abind1.4-5
abtest1.0.1accrualPlot1.0.7
ACD1.5.3acebayes1.10
acepack1.4.2ACNE0.9.1
acp2.1acs2.1.4
ACSWR1.0ActivePathways2.0.4
actuar3.3-4actuaRE0.1.5
ActuarialM0.1.0actuaryr1.1.1
actxps1.4.0ada2.0-5
adagio0.9.2adaptivetau2.3-1
adaptMCMC1.5adaptr1.4.0
ADAPTS1.0.22adaptsmoFMRI1.2
adaptTest1.2additivityTests1.1-4.2
ade41.7-22ade4TkGUI0.3-1
adegenet2.1.10adegraphics1.0-21
adehabitatHR0.4.21adehabitatHS0.3.17
adehabitatLT0.3.27adehabitatMA0.3.16
adephylo1.1-16adespatial0.3-23
ADGofTest0.3adimpro0.9.6
adiv2.2.1adjclust0.6.9
adlift1.4-5admisc0.35
AdMit2.1.9ads1.5-10
AdvancedBasketballStats1.0.1AER1.2-12
affy1.82.0affyio1.74.0
africamonitor0.2.4agricolae1.3-7
agricolaeplotr0.5.0agridat1.23
agriwater1.0.2agvgd0.1.2
AhoCorasickTrie0.1.2aion1.0.2
airGR1.7.6airGRdatasets0.2.1
airGRdatassim0.1.3airGRiwrm0.6.2
airGRteaching0.3.2airports0.1.0
airr1.5.0ajv1.0.0
akima0.6-3.4alabama2023.1.0
alakazam1.3.0aLFQ1.3.6
AlgDesign1.2.1aliases2entrez0.1.2
almanac1.0.0alpaca0.3.4
alphavantager0.1.3altair4.2.3
ALTopt0.1.2Amelia1.8.2
ammiBayes1.0-2ampir1.1.0
AMR2.1.1anabel3.0.1
AnaCoDa0.1.4.4anacor1.1-4
analogsea1.0.7.2anesrake0.80
animation2.7anipaths0.10.3
anMC0.2.5annotate1.82.0
AnnotationBustR1.3.0AnnotationDbi1.66.0
AnnuityRIR1.0-0Anthropometry1.19
anytime0.3.9ao1.0.0
aod1.3.3aoos0.5.0
AovBay0.1.0apc2.0.0
apcluster1.4.13ape5.8
apex1.0.6APFr1.0.2
aphid1.3.5aphylo0.3-3
apisensr1.0.0aplot0.2.3
apollo0.3.3approximator1.2-8
apt3.0ARCensReg3.0.1
arcgislayers0.2.0arcgisutils0.3.0
archetypes2.2-0.1archivist2.3.6
ArDec2.1-1ARDL0.2.4
ardl.nardl1.3.0areal0.1.8
arfima1.8-1argo3.0.2
argparse2.2.3arima23.1.0
arkhe1.6.0arm1.14-4
aroma.affymetrix3.2.2aroma.apd0.7.0
aroma.cn1.7.1aroma.core3.3.1
aroma.light3.34.0arpr0.1.2
arrangements1.1.9arrow16.1.0
ars0.7arsenal3.6.3
aRxiv0.10ascii2.6
asd2.2ash1.0-15
ashr2.2-63AsioHeaders1.22.1-2
askpass1.2.0aspect1.0-6
ASSA2.0assertthat0.2.1
AssetCorr1.0.4astsa2.1
asymmetry2.0.4ata1.1.1
atom4R0.3-3atRisk0.1.0
attempt0.3.1attention0.4.0
AUC0.3.2audio0.1-11
autoFRK1.4.3autoimage2.2.3
automap1.1-9autostsm3.1.5
av0.9.0aweek1.0.3
aws2.5-5aws.signature0.6.0
awsMethods1.1-1AzureAppInsights0.3.1
AzureAuth1.3.3AzureCognitive1.0.1
AzureContainers1.3.2AzureCosmosR1.0.0
AzureGraph1.3.4AzureKusto1.1.3
AzureQstor1.0.1AzureRMR2.4.4
AzureStor3.7.0AzureTableStor1.0.0
AzureVision1.0.2AzureVM2.2.2
babelgene22.9babelwhale1.2.0
BACCO2.1-0BACCT1.0
backports1.5.0backtest0.3-4
bacondecomp0.1.1baggr0.7.8
bain0.2.11BalancedSampling2.0.6
BaM1.0.3bama1.3.0
bamdit3.4.0bamlss1.2-4
BAMMtools2.1.11bang1.0.3
BANOVA1.2.1BarcodingR1.0-3
BART2.9.9bartCause1.0-8
bartcs1.2.2bartMachine1.3.4.1
bartMachineJARs1.2.1BAS1.7.1
basad0.3.0base642.0.1
base64enc0.1-3base64url1.4
baseballr1.6.0basicMCMCplots0.2.7
BASiNET0.0.5BaSkePro1.1.1
BasketballAnalyzeR0.5.0BASS1.3.1
BatchExperiments1.4.3BatchJobs1.9
batchmeans1.0-4BAwiR1.3.2
baycn1.2.0bayefdr0.2.1
bayes4psy1.2.12bayesAB1.1.3
bayesammi0.1.0bayesanova1.6
BayesARIMAX0.1.1BayesBinMix1.4.1
bayesbio1.0.0bayesboot0.2.2
BayesBP1.1BayesCACE1.2.3
BayesCombo1.0BayesComm0.1-2
bayescopulareg0.1.3bayescount0.9.99-9
BayesCR2.1bayesCT0.99.3
BayesCTDesign0.6.1BayesDA2012.04-1
bayesDccGarch3.0.4bayesdfa1.3.3
bayesdistreg0.1.0bayesDP1.3.6
BayesFactor0.9.12-4.7BayesFM0.1.7
bayesforecast1.0.1bayesGAM0.0.2
bayesGARCH2.1.10BayesGOF5.2
BayesGPfit1.1.0BayesGWQS0.1.1
bayesian1.0.1bayesianETAS1.0.3
BayesianFactorZoo0.0.0.2Bayesiangammareg0.1.0
BayesianGLasso0.2.0BayesianLaterality0.1.2
BayesianNetwork0.3BayesianTools0.1.8
bayesianVARs0.1.2bayesImageS0.6-1
BayesLCA1.9bayesLife5.2-0
BayesLN0.2.10BayesLogit2.1
bayeslongitudinal0.1.0bayesm3.1-6
BayesMallows2.2.1BayesMassBal1.1.0
bayesmeta3.4bayesmix0.7-6
bayesnec2.1.2.0bayesplot1.11.1
bayesQR2.4bayesRecon0.3.0
bayestestR0.13.2bayesTFR7.4-2
BayesTools0.2.17BayesTree0.3-1.5
BayesVarSel2.2.5BayesX0.3-3
BAYSTAR0.2-10baytrends2.0.11
BB2019.10-1BBmisc1.13
bbmle1.0.25.1bbotk0.8.0
BCBCSF1.0-1BCC19970.1.1
BClustLonG0.1.3bcpa1.3.2
bcrm0.5.4BDgraph2.72
bdrc1.1.0bdsmatrix1.3-7
BE0.2.4beachmat2.20.0
beadarray2.54.0BeadDataPackR1.56.0
beakr0.4.3bearishTrader1.0.2
beastier2.5.1beautier2.6.12
BED1.5.2beepr1.3
beeswarm0.4.0benchmarkme1.0.8
benchmarkmeData1.0.4BenfordTests1.2.0
bentcableAR0.3.1Bergm5.0.7
Bernadette1.1.5berryFunctions1.22.5
Bessel0.6-0BetaBit2.2
betafunctions1.9.0betapart1.6
betareg3.1-4betategarch3.3
BETS0.4.9bets.covid191.0.0
beyondWhittle1.2.1bezier1.1.2
bfast1.6.1BGLR1.1.2
BGVAR2.5.5bgw0.1.3
BH1.84.0-0BHH22016.05.31
BiasCorrector0.2.2BiasedUrn2.0.12
bibtex0.5.1biclust2.0.3.1
bidask2.0.4bife0.7.2
BIFIEsurvey3.6-6biganalytics1.1.22
bigchess1.9.1bigD0.2.0
bigleaf0.8.2biglm0.9-3
bigmemory4.6.4bigmemory.sri0.1.8
bigrquery1.5.1bigsplines1.1-1
bigtime0.2.3BigVAR1.1.2
bimets3.0.2bindr0.1.1
bindrcpp0.2.3binhf1.0-3
binman0.1.3binom1.1-1.1
binr1.1.1binseqtest1.0.4
bio3d2.4-4Biobase2.64.0
BiocFileCache2.12.0BiocGenerics0.50.0
BiocIO1.14.0BiocManager1.30.23
BiocParallel1.38.0BiocSingular1.20.0
BiocVersion3.19.1BioInsight0.3.1
biomaRt2.60.0biomartr1.0.7
biomformat1.32.0bioseq0.1.4
Biostrings2.72.1biotic0.1.2
bipartite2.20birtr1.0.0
BisqueRNA1.0.5bit4.0.5
bit644.0.5bitops1.0-7
biwavelet0.20.21bizdays1.0.16
bkmr0.2.2blaise1.3.11
blastula0.3.5blavaan0.5-5
blink1.1.0BLModel1.0.2
blob1.2.4blocklength0.1.5
blockmatrix1.0blockrand1.5
blocksdesign4.9blockTools0.6.4
blogdown1.19BLR1.6
BLRPM1.0BMA3.18.17
bmgarch2.0.0BMisc1.4.6
bmixture1.7BMS0.3.5
BMTAR0.1.1bnlearn4.9.4
BNPTSclust2.0BNSP2.2.3
bnstruct1.0.15boa1.1.8-2
boilerpipeR1.3.2BOIN2.7.2
boiwsa1.1.1bold1.3.0
Bolstad0.2-41Bolstad21.0-29
bondAnalyst1.0.1bookdown0.39
Boom0.9.15BoomSpikeSlab1.2.6
bootnet1.6BootPR1.0
bootstrap2019.6bootUR1.0.4
BoSSA3.7boussinesq1.0.6
boxr0.3.6bpca1.3-6
bqtl1.0-36BradleyTerry21.1-2
brainR1.6.0brandwatchR0.3.0
breakfast2.4brew1.0-10
brglm0.7.2brglm20.9.2
bridgesampling1.1-2BRINDA0.1.5
brio1.1.5brms2.21.0
Brobdingnag1.2-9broman0.84
broom1.0.6broom.helpers1.15.0
brotli1.3.0bsam1.1.3
bsamGP1.2.5BSgenome1.72.0
bsicons0.1.2bslib0.7.0
BsMD2023.920bspec1.6
bspmma0.1-2bssm2.0.2
BSSprep0.1bsts0.9.10
bsvars3.0BTLLasso0.1-13
BTM0.3.7bullishTrader1.0.1
bundesbank0.1-12BurStFin1.3
BurStMisc1.1BVAR1.0.5
bvarsv1.1bvartools0.2.4
bvls1.4C500.1.8
ca0.71.1cabinets0.6.0
cabootcrs2.1.0cachem1.1.0
cacIRT1.4CADFtest0.3-3
caffsim0.2.2Cairo1.6-2
CALANGO1.0.16calculus1.0.1
calibrar0.9.0calibrate1.7.7
CalibrateSSB1.3.0calibrator1.2-8
callr3.7.6cancensus0.5.7
candisc0.9.0CANSIM2R1.14.1
caper1.0.3captr0.3.0
capushe1.1.2car3.1-2
caRamel1.3CARBayes6.1.1
CARBayesdata3.0CARBayesST4.0
carData3.0-5caret6.0-94
carfima2.0.2caribou1.1-1
carrier0.1.1cartogram0.3.0
Cascade2.1CascadeData1.4
CAST1.0.2castor1.8.0
CatDataAnalysis0.1-5caTools1.18.2
catR3.17causact0.5.5
CausalImpact1.3.0CAvariants6.0
CB21.3.4cbioportalR1.1.0
cbsodataR1.0.1ccaPP0.3.3
cccp0.3-1cdlTools1.13
CDM8.2-6cds1.0.3
CellNOptR1.50.0cellranger1.1.0
censReg0.5-38censusapi0.8.0
CEoptim1.3CePa0.8.0
CeRNASeek2.1.3cffr1.0.1
cfr0.1.1CFtime1.4.0
ChainLadder0.2.18chandwich1.1.6
changepoint2.2.4changepoint.geo1.0.2
changepoint.np1.0.5checkLuhn1.1.0
checkmate2.3.1checkpoint1.0.2
chem.databases1.0.0ChemoSpec6.1.10
ChemoSpecUtils1.0.4cherryblossom0.1.0
chess1.0.1chilemapas0.3.0
chk0.9.1choiceDes0.9-3
cholera0.8.0CholWishart1.1.2
choroplethr3.7.3choroplethrMaps1.0.1
chromoMap4.1.1chromote0.2.0
chron2.3-61cifti0.4.5
cinterpolate1.0.1circlize0.4.16
CircSpaceTime0.9.0CircStats0.2-6
circular0.5-0ciTools0.6.1
Ckmeans.1d.dp4.3.5Claddis0.6.3
clarabel0.5.1clarifai0.4.2
classInt0.4-10cleanepi1.0.2
clevr0.1.2cli3.6.3
clifro3.2-5climatol4.1.0
clime0.5.0clinDR2.4.1
clinfun1.1.5clinicalsignificance2.0.0
clinPK0.13.0clinsig1.2
clipr0.8.0clisymbols1.2.0
clmplus1.0.0clock0.7.0
clubSandwich0.5.11clue0.3-65
clusterGeneration1.3.8clustermole1.1.1
clusterProfiler4.12.0clusterSEs2.6.5
clustMixType0.3-14ClustVarLV2.1.1
clv0.3-2.4cmaes1.0-12
cmaesr1.0.3CMLS1.0-1
cmm1.0cmocean0.3-1
cmprsk2.2-12cmrutils1.3.1
CNLTreg0.1-2CNLTtsa0.1-2
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scatterplot3d0.3-44scBio0.1.6
sccore1.0.5scholar0.2.4
SCI1.0-2scINSIGHT0.1.4
scLink1.0.1scoper1.3.0
scoringRules1.1.1scoringutils1.2.2
SCORPIUS1.0.9ScottKnott1.3-2
scs3.2.4scSorter0.0.2
scTenifoldKnk1.0.1scTenifoldNet1.3
sctransform0.4.1SDaA0.1-5
sdcHierarchies0.21.0sdcMicro5.7.8
sdcSpatial0.5.2sdcTable0.32.6
sde2.0.18sdmTMB0.6.0
sdpt3r0.3sdrt1.0.0
sealasso0.1-3seas0.6-0
season0.3.15seasonal1.9.0
seasonalview0.3seastests0.15.4
secretbase1.0.0seer1.1.8
segmented2.1-0SelectBoost2.2.2
selectiveInference1.2.5selectr0.4-2
seleniumPipes0.3.7sem3.1-15
semantic.assets1.1.0semds0.9-6
SemiPar1.0-4.2semmcmc0.0.6
semPlot1.1.6SEMsens1.5.5
semsfa1.1semTools0.5-6
semtree0.9.20semver0.2.0
sendmailR1.4-0SensoMineR1.27
sentencepiece0.2.3sentiment.ai0.1.1
sentometrics1.0.0separationplot1.4
seqDesign1.2seqgendiff1.2.4
seqinr4.2-36SeqNet1.1.3
SequenceSpikeSlab1.0.1seriation1.5.5
servr0.30sessioninfo1.2.2
setartree0.2.1setRNG2024.2-1
sets1.0-25settings0.2.7
Seurat5.1.0SeuratObject5.0.2
sf1.0-16sFFLHD0.1.2
sfheaders0.4.4sfsmisc1.1-18
sftime0.2-0sgeostat1.0-27
shades1.4.0shadowtext0.1.3
shape1.4.6.1shapefiles0.7.2
shapes1.2.7SharpeR1.3.0
shazam1.2.0ShiftConvolvePoibin1.0.0
shiny1.8.1.1shiny.semantic0.5.1
shinyAce0.4.2shinyalert3.1.0
shinybrms1.8.0shinyBS0.61.1
shinybusy0.3.3shinycssloaders1.0.0
shinydashboard0.7.2shinydashboardPlus2.0.4
shinyFiles0.9.3ShinyItemAnalysis1.5.1
shinyjs2.1.0shinymaterial1.2.0
shinystan2.6.0shinythemes1.2.0
shinyTree0.3.1shinyWidgets0.8.6
showimage1.0.0showtext0.9-7
showtextdb3.0shrinkTVP3.0.1
SIBERG2.0.3sigminer2.3.1
sigmoid1.4.0Signac1.13.0
SignacX2.2.5signal1.8-0
signs0.1.2sigora3.1.1
SigTree1.10.6Sim.DiffProc4.9
simcdm0.1.2SimComp3.3
simex1.8simfinapi1.0.0
simglm0.8.9SimilarityMeasures1.4
SimInf9.8.1SIMMS1.3.2
simpleboot1.1-7simPop2.1.3
simputation0.2.8simrel2.1.0
SiMRiv1.0.6simsem0.5-16
SimSurvey0.1.6SingleCellExperiment1.26.0
singleCellHaystack1.0.2singleRcapture0.2.1.1
singscore1.24.0siplab1.6
sirt4.1-15sitmo2.0.2
sits1.5.0sjlabelled1.2.0
sjmisc2.8.10SkewHyperbolic0.4-2
skmeans0.2-16skpr1.7.1
slackr3.3.1slam0.1-50
SlaPMEG1.0.1SLBDD0.0.4
slcm0.1.0sleekts1.0.2
sleeperapi1.1.1Sleuth22.0-7
Sleuth31.0-6slfm1.0.2
SLHD2.1-1slider0.3.1
slippymath0.3.1sm2.2-6.0
smacof2.1-6smacofx1.5-3
smacpod2.6SmallCountRounding1.0.3
smam0.7.2SMDIC0.1.5
smerc1.8.3smoof1.6.0.3
smooth4.0.2smoothr1.0.1
smoots1.1.4smovie1.1.6
SMPracticals1.4-3.1sms2.3.1
SMVar1.3.4sn2.1.1
sna2.7-2snakecase0.11.1
snow0.4-4SnowballC0.7.1
snowfall1.84-6.3snpStats1.54.0
snvecR3.9.4SOAs1.4
soc.ca0.8.0socceR0.1.1
socialmixr0.3.2sodium1.3.1
sofa0.4.0SoilHyP0.1.7
soilhypfit0.1-7soilwater1.0.5
solaR0.46solartime0.0.2
solrium1.2.0solvebio2.14.0
soma1.2.0sonicLength1.4.7
sorvi0.8.21SoupX1.6.2
sourcetools0.1.7-1sp2.1-4
sp23design0.9-1spacetime1.3-1
spam2.10-0spaMM4.5.0
spant2.21.0sparklyr1.8.6
sparktex0.1sparr2.3-10
SparseArray1.4.8sparseDFM1.0
sparseinv0.1.3SparseM1.83
sparseMatrixStats1.16.0sparseMVN0.2.2
sparsevar0.1.0spatgraphs3.4
spatialCovariance0.6-9SpatialEpi1.2.8
SpatialExperiment1.14.0SpatialExtremes2.1-0
SpatialPosition2.1.2spatialprobit1.0.4
spatialreg1.3-4spatialsample0.5.1
SpatialTools1.0.5spatialwidget0.2.5
spatstat3.0-8spatstat.data3.1-2
spatstat.explore3.2-7spatstat.geom3.2-9
spatstat.linnet3.1-5spatstat.model3.2-11
spatstat.random3.2-3spatstat.sparse3.1-0
spatstat.utils3.0-5spBayes0.4-7
spBayesSurv1.1.8Spbsampling1.3.5
spd2.0-1spData2.3.1
spdep1.3-5spec0.1.9
spectral2.0speff2trial1.0.5
SPEI1.8.1spelling2.3.0
sperrorest3.0.5sphet2.0
spiderbar0.2.5spikeslab1.1.6
spikeSlabGAM1.1-19spINAR0.2.0
spind2.2.1splancs2.01-45
SPLICE1.1.2splines20.5.2
splitstackshape1.4.8splm1.6-5
spls2.2-3splus2R1.3-5
spmodel0.6.0spmoran0.2.3
SportsTour0.1.0sportyR2.2.2
spselect0.0.1spsur1.0.2.5
spsurvey5.5.1spTimer3.3.2
sptotal1.0.1sqldf0.4-11
SqlRender1.18.0SQRL1.0.2
SQUAREM2021.1srvyr1.2.0
ssanv1.1SSBtools1.5.2
ssfa1.2.2ssgraph1.15
ssize.fdr1.3ssizeRNA1.3.2
ssMousetrack1.1.6ssmrob1.0
SSN20.1.1sstvars1.0.1
stable1.1.6stabledist0.7-1
stabs0.6-4staggered1.1
stampr0.3.1StanHeaders2.32.9
StanMoMo1.2.0stargazer5.2.3
starma1.3stars0.6-5
starter0.1.15STARTS1.3-8
startupmsg0.9.6.1statcanR0.2.6
statcodelists0.9.2statcomp0.1.0
statebins1.4.0statespacer0.5.0
stationaRy0.5.1statip0.2.3
StatMatch1.4.2statmod1.5.0
statnet.common4.9.0StatRank0.0.6
statVisual1.2.1steadyICA1.0
SteinIV0.1-1STFTS0.1.0
stinepack1.5stlplus0.5.1
stm1.3.7StMoMo0.4.1
stochQN0.1.2-1stochvol3.2.4
stockAnalyst1.0.1stops1.0-1
stopwords2.3storr1.2.5
stplanr1.2.1stR0.6
strand0.2.0strap1.6-1
stratification2.2-7streamDepletr0.2.0
streamR0.4.5stringdist0.9.12
stringfish0.16.0stringi1.8.4
stringmagic1.1.2stringr1.5.1
strucchange1.5-3strucchangeRcpp1.5-3-1.0.4
StructuralDecompose0.1.1styler1.10.3
subplex1.8subscore3.3
sufficientForecasting0.1.0sugrrants0.2.9
SummarizedExperiment1.34.0SUMMER1.4.0
suntools1.0.0supclust1.1-1
SuperLearner2.0-29superml0.5.7
superpc1.12SuppDists1.1-9.7
support.CEs0.7-0surface0.5
SurrogateRegression0.6.0.1suRtex0.9
survcomp1.54.0surveillance1.23.0
survey4.4-2surveybootstrap0.0.3
surveydata0.2.7surveyplanning4.0
surveysd1.3.1survival6660.5
survivalROC1.0.3.1survminer0.4.9
survMisc0.5.6survPresmooth1.1-11
sva3.52.0svars1.3.11
svd0.5.5svDialogs1.1.0
SVDNF0.1.8svglite2.1.3
svGUI1.0.1svrep0.6.4
svs3.0.0svUnit1.0.6
swagger5.17.14sweep0.2.5
swephR0.3.1SwimmeR0.14.2
swirl2.4.5swirlify0.5.3
switchr0.14.8SWTools1.0.3
sylly0.1-6sym.arma1.0
symengine0.2.6symmoments1.2.1
synchronicity1.3.10SYNCSA1.3.4
Synth1.1-8synthACS1.7.1
synthesis1.2.4SynthETIC1.1.0
synthpop1.8-0sys3.4.2
sysfonts0.8.9systemfit1.1-30
systemfonts1.1.0table11.4.3
tables0.9.25tabnet0.6.0
tabuSearch1.1.1TAF4.2.0
tagcloud0.6TailRank3.2.2
TAM4.2-21tanaka0.4.0
TAQMNGR2018.5-1targets1.7.1
tau0.0-25taxize0.9.100
tbea1.4.2TBRDist1.0.2
tbrf0.1.5TCA1.2.1
TCGAbiolinks2.32.0TCGAbiolinksGUI.data1.24.0
TcGSA0.12.10tcltk21.2-11
Tcomp1.0.1tdigest0.4.2
TeachingDemos2.13teamcolors0.0.4
telegram.bot3.0.0tempdisagg1.1.1
tensor1.5tensorA0.36.2.1
tensorflow2.16.0TensorPreAve1.1.0
tensorTS1.0.2TEQR6.0-0
tergm4.2.0Ternary2.3.1
terra1.7-78terrainr0.7.5
TESS2.1.2tesseract5.2.1
testcorr0.2.0TestDataImputation2.3
TestDesign1.6.1tester0.2.0
TestFunctions0.2.1testit0.13
TestScorer1.7.2testthat3.2.1.1
TexExamRandomizer1.2.7texreg1.39.3
text2vec0.6.4textcat1.0-8
textir2.0-5textplot0.2.2
textrank0.3.1textreuse0.1.5
textshaping0.4.0textTinyR1.1.8
tfarima0.3.2tfautograph0.3.2
tfdatasets2.9.0tfhub0.8.1
tfio0.4.1TFisher0.2.0
tframe2015.12-1.1tfruns1.5.3
tgp2.4-22TGS1.0.1
TH.data1.1-2theft0.6.1
thief0.3ThreeGroups0.21
threejs0.3.3ThreeWay1.1.3
thurstonianIRT0.12.5tibble3.2.1
tibbletime0.1.8tictoc1.2.1
Tides2.1tidyBdE0.3.6
tidycensus1.6.3tidyestimate1.1.1
tidygraph1.3.1tidyhydat0.6.1
tidyLPA1.1.0tidymodels1.2.0
tidyquant1.0.7tidyr1.3.1
tidyREDCap1.1.1tidyRSS2.0.7
tidyselect1.2.1tidySEM0.2.7
tidysynth0.2.0tidyterra0.6.1
tidytext0.4.2tidytree0.4.6
tidyverse2.0.0tidyvpc1.5.1
tiff0.1-12tigris2.1
tikzDevice0.12.6timechange0.3.0
timeDate4032.109timeless0.2.1
timeSeries4032.109timeseriesdb1.0.0-1.1.2
timetk2.9.0timsac1.3.8-4
tinyarray2.4.2tinyProject0.6.1
tinytable0.3.0tinytex0.51
tis1.39tkrplot0.0-27
tkWidgets1.82.0TLMoments0.7.5.3
tm0.7-13tm.plugin.alceste1.1.1
tm.plugin.dc0.2-10tm.plugin.europresse1.4
tm.plugin.factiva1.8tm.plugin.lexisnexis1.4.1
tm.plugin.mail0.2-2tmap3.3-4
tmaptools3.1-1TMB1.9.12
Tmisc1.0.1tmod0.50.13
tmvnsim1.0-2tmvtnorm1.6
tnet3.0.16tokenizers0.3.0
tokenizers.bpe0.1.3topicdoc0.1.1
topicmodels0.2-16topicmodels.etm0.1.0
topmodel0.7.5topologyGSA1.5.0
toprdata1.0.2torch0.13.0
torchaudio0.3.1.9000torchdatasets0.3.1
torchvision0.6.0tpr0.3-3
tracerer2.2.3trackdem0.7.2
trackdf0.3.3trackdown1.1.1
trackeR1.6.0trackeRapp1.2
TrackReconstruction1.3tractor.base3.4.2
traipse0.3.0trajectories0.2-8
TrajectoryUtils1.12.0trajr1.5.1
transformr0.1.5transfR1.0.11
TransPhylo1.4.5trapezoid2.0-2
traudem1.0.3tree1.0-43
treebalance1.2.0treebase0.1.5
TreeBUGS1.5.0treedater0.5.0
TreeDist2.7.0treefit1.0.2
treeio1.28.0treemap2.4-4
TreeSearch1.5.1TreeSim2.4
treespace1.1.4.3TreeTools1.11.1
trend1.1.6trendeval0.1.0
trending0.1.0TrialSize1.4
triangle1.0triebeard0.4.1
trimcluster0.1-5trip1.10.0
tripack1.3-9.1tripEstimation0.0-46
TripleR1.5.4TruncatedNormal2.2.2
truncdist1.0-2truncnorm1.0-9
truncreg0.2-5trust0.1-8
trustOptim0.8.7.3tryCatchLog1.3.1
TSA1.3.1TSANN0.1.0
tsbox0.4.1tsBSS1.0.0
TSCAN1.42.0TSclust1.3.1
tscount1.4.3tsdataleaks2.1.1
tsdb1.1-0tsdecomp0.2
TSdeeplearning0.1.0tsdisagg20.1.0
TSdisaggregation2.0.0TSdist3.7.1
tsdistributions1.0.1tsDyn11.0.4.1
TSEAL0.1.2TSEntropies0.9
tseries0.10-56tseriesChaos0.1-13.1
tseriesEntropy0.7-2tseriesTARMA0.3-4
tsfeatures1.1.1tsfknn0.6.0
tsgarch1.0.2tsibble1.1.4
tsibbledata0.4.1tsibbletalk0.1.0
tsintermittent1.10tsiR0.4.3
TSLSTM0.1.0TSLSTMplus1.0.4
tsmethods1.0.1tsModel0.6-1
tsne0.1-3.1tsnet0.1.0
tsoutliers0.6-10TSP1.2-4
tsPI1.0.4TSrepr1.1.0
tsrobprep0.3.2tssim0.1.7
TSstudio0.1.7tstests1.0.0
TSTutorial1.2.7tsutils0.9.4
tswge2.1.0tth4.16-0
TTR0.24.4tufterhandout1.2.1
tune1.2.1TUWmodel1.1-1
tvm0.5.2twdtw1.0-1
tweedie2.3.5tweenr2.0.3
twosamples2.0.1TxDb.Hsapiens.UCSC.hg19.knownGene3.2.2
TxDb.Hsapiens.UCSC.hg38.knownGene3.18.0txtq0.2.4
tzdb0.4.0uaparserjs0.3.5
ubiquity2.0.3ucminf1.2.1
UComp4.0.2UCSC.utils1.0.0
udpipe0.8.11ufRisk1.0.7
ugatsdb0.2.3uGMAR3.4.5
umap0.2.10.0uncmbb0.2.2
unglue0.1.0UnifiedDoseFinding0.1.10
unifir0.2.4units0.8-5
univOutl0.4unrepx1.0-2
unrtf1.4.5UpSetR1.4.0
uptasticsearch0.4.0urca1.3-4
urlchecker1.0.1urlshorteneR1.5.7
urltools1.7.3uroot2.1-3
USA.state.boundaries1.0.1usdata0.3.1
usethis2.2.3usmap0.7.1
usmapdata0.3.0utf81.2.4
utility1.4.6uuid1.2-0
uwot0.2.2V84.4.2
VALERIE1.1.0validate1.1.5
validatetools0.5.2valr0.8.1
VAM1.1.0vapour0.10.0
VAR.etp1.1varbvs2.6-10
VARDetect0.1.8vardiag0.2-1
vardpoor0.20.1VaRES1.0.2
vars1.6-1VARshrink0.3.1
varycoef0.3.4VCA1.5.1
vcd1.4-12vcdExtra0.8-5
vcr1.2.2vctrs0.6.5
vdg1.2.3VedicDateTime0.1.9
vegan2.6-6.1vegawidget0.5.0
vegperiod0.4.0VennDiagram1.7.3
venneuler1.1-4VGAM1.1-11
VGAMdata1.1-9vglmer1.0.3
vhica0.2.8VIC50.2.6
VIM6.2.2VineCopula2.5.0
vines1.1.5vip0.4.1
viridis0.6.5viridisLite0.4.2
visNetwork2.1.2visualize4.5.0
vkR0.2volatilityTrader1.0.1
volcano3D2.0.9volleystat0.2.0
vpc1.2.2vroom1.6.5
vrtest1.2vsn3.72.0
W3CMarkupValidator0.1-7waiter0.2.5
waldo0.5.2warp0.2.1
washdata0.1.4WASP1.4.3
waterData1.0.8waterquality1.0.0
WaveletComp1.1wavelets0.3-0.2
waveslim1.8.5wavethresh4.7.2
wavScalogram1.1.3waywiser0.5.1
wbstats1.0.4wCorr1.9.8
WDI2.7.8wdm0.2.4
wdman0.2.6WebAnalytics0.9.12
webchem1.3.0webdriver1.0.6
WebGestaltR0.4.6webmockr0.9.0
webreadr0.4.0webshot0.5.5
webshot20.1.1websocket1.4.1
webutils1.2.0wehoop2.0.0
WeightedPortTest1.1WeightIt1.1.0
weights1.0.4welo0.1.4
WeMix4.0.3WGCNA1.72-5
WH1.1.1whisker0.4.1
whitebox2.4.0whitening1.4.0
whoami1.3.0widgetframe0.3.1
widgetTools1.82.0WikidataQueryServiceR1.0.0
WikidataR2.3.3WikipediR1.7.1
wikitaxa0.4.0wildlifeDI1.0.0
wilson2.4.2windex2.0.8
wINEQ1.2.0withr3.0.0
wk0.9.1wktmo1.0.5
wkutils0.1.3wnl0.8.1
wooldridge1.4-3worcs0.1.14
word2vec0.4.0wordcloud2.6
wordnet0.1-17workflowr1.7.1
workflows1.1.4workflowsets1.1.0
worldfootballR0.6.2worldmet0.9.8
worrms0.4.3wpp20171.2-3
wpp20191.1-1wql1.0.1
WrightMap1.3writexl1.5.0
WriteXLS6.6.0wrMisc1.15.0.3
wrProteo1.11.0.1WRSS3.1
wrswoR1.1.1WRTDStidal1.1.4
WufooR1.0.1x121.10.3
x13binary1.1.60xaringan0.30
XBRL0.99.19.1xfun0.45
xgboost1.7.7.1xgxr1.1.2
XLConnect1.0.10xlsx0.6.5
xlsxjars0.6.1XML3.99-0.16.1
xml21.3.6XML2R0.0.8
xmlrpc21.1xopen1.0.1
xplain0.2.2xpose0.4.18
xpose.nlmixr20.4.0xpose44.7.3
xslt1.4.5xtable1.8-4
xts0.14.0XVector0.44.0
xxIRT2.1.2yaImpute1.0-34
yaml2.3.8yardstick1.3.1
yesno0.1.2yhatr0.15.1
yorkr0.0.42ypssc1.1.0
yuima1.15.27yulab.utils0.1.4
zeallot0.1.0zen4R0.10
zic0.9.1ZIM1.1.0
ZINARp0.1.0zip2.3.1
zipfR0.6-70zlib1.0.3
zlibbioc1.50.0zoo1.8-12
ZRA0.2ztable0.2.3
zTree1.0.7zyp0.11-1

After the instance is started, you can access the RShiny Server with its public IP address. For example, if the IP address is 10.11.12.13, typing http://10.11.12.13 in the browser will bring you to the startup page below.

The RShiny applications are served from the directory /srv/shiny-server.

main page

RShiny Server

R: 4.4.0

rshiny-server: 1.5.22.1017

Release Notes

Upgraded R to version 4.4.0 and all R packages to their latest versions.

This image provides thousands of R packages covering various domains such as data science, machine learning, economitrics, database, finance, official statistics, survey statistics, Bayesian statistics, clinical trials, epidemiology, experimental design, psychometric methodology, analysis of pharmacokinetic data, medical image processing, teaching statistics, time series analysis, analysis of spatial and spatiotemporal data, reproducible research, phylogenetics, web technologies, hydrology, sports analytics, natural language processing, actuarial science, optimization, genomics, proteomics, metabolomics, transcriptomics, and other omics.

R packages (4274)

packageversionpackageversion
abc2.2.1abc.data1.1
ABCoptim0.15.0abcrf1.9
abglasso0.1.1abind1.4-5
abtest1.0.1accrualPlot1.0.7
ACD1.5.3acebayes1.10
acepack1.4.2ACNE0.9.1
acp2.1acs2.1.4
ACSWR1.0ActivePathways2.0.4
actuar3.3-4actuaRE0.1.5
ActuarialM0.1.0actuaryr1.1.1
actxps1.4.0ada2.0-5
adagio0.9.2adaptivetau2.3-1
adaptMCMC1.5adaptr1.4.0
ADAPTS1.0.22adaptsmoFMRI1.2
adaptTest1.2additivityTests1.1-4.2
ade41.7-22ade4TkGUI0.3-1
adegenet2.1.10adegraphics1.0-21
adehabitatHR0.4.21adehabitatHS0.3.17
adehabitatLT0.3.27adehabitatMA0.3.16
adephylo1.1-16adespatial0.3-23
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symengine0.2.6symmoments1.2.1
synchronicity1.3.10SYNCSA1.3.4
Synth1.1-8synthACS1.7.1
synthesis1.2.4SynthETIC1.1.0
synthpop1.8-0sys3.4.2
sysfonts0.8.9systemfit1.1-30
systemfonts1.1.0table11.4.3
tables0.9.25tabnet0.6.0
tabuSearch1.1.1TAF4.2.0
tagcloud0.6TailRank3.2.2
TAM4.2-21tanaka0.4.0
TAQMNGR2018.5-1targets1.7.1
tau0.0-25taxize0.9.100
tbea1.4.2TBRDist1.0.2
tbrf0.1.5TCA1.2.1
TCGAbiolinks2.32.0TCGAbiolinksGUI.data1.24.0
TcGSA0.12.10tcltk21.2-11
Tcomp1.0.1tdigest0.4.2
TeachingDemos2.13teamcolors0.0.4
telegram.bot3.0.0tempdisagg1.1.1
tensor1.5tensorA0.36.2.1
tensorflow2.16.0TensorPreAve1.1.0
tensorTS1.0.2TEQR6.0-0
tergm4.2.0Ternary2.3.1
terra1.7-78terrainr0.7.5
TESS2.1.2tesseract5.2.1
testcorr0.2.0TestDataImputation2.3
TestDesign1.6.1tester0.2.0
TestFunctions0.2.1testit0.13
TestScorer1.7.2testthat3.2.1.1
TexExamRandomizer1.2.7texreg1.39.3
text2vec0.6.4textcat1.0-8
textir2.0-5textplot0.2.2
textrank0.3.1textreuse0.1.5
textshaping0.4.0textTinyR1.1.8
tfarima0.3.2tfautograph0.3.2
tfdatasets2.9.0tfhub0.8.1
tfio0.4.1TFisher0.2.0
tframe2015.12-1.1tfruns1.5.3
tgp2.4-22TGS1.0.1
TH.data1.1-2theft0.6.1
thief0.3ThreeGroups0.21
threejs0.3.3ThreeWay1.1.3
thurstonianIRT0.12.5tibble3.2.1
tibbletime0.1.8tictoc1.2.1
Tides2.1tidyBdE0.3.6
tidycensus1.6.3tidyestimate1.1.1
tidygraph1.3.1tidyhydat0.6.1
tidyLPA1.1.0tidymodels1.2.0
tidyquant1.0.7tidyr1.3.1
tidyREDCap1.1.1tidyRSS2.0.7
tidyselect1.2.1tidySEM0.2.7
tidysynth0.2.0tidyterra0.6.1
tidytext0.4.2tidytree0.4.6
tidyverse2.0.0tidyvpc1.5.1
tiff0.1-12tigris2.1
tikzDevice0.12.6timechange0.3.0
timeDate4032.109timeless0.2.1
timeSeries4032.109timeseriesdb1.0.0-1.1.2
timetk2.9.0timsac1.3.8-4
tinyarray2.4.2tinyProject0.6.1
tinytable0.3.0tinytex0.51
tis1.39tkrplot0.0-27
tkWidgets1.82.0TLMoments0.7.5.3
tm0.7-13tm.plugin.alceste1.1.1
tm.plugin.dc0.2-10tm.plugin.europresse1.4
tm.plugin.factiva1.8tm.plugin.lexisnexis1.4.1
tm.plugin.mail0.2-2tmap3.3-4
tmaptools3.1-1TMB1.9.12
Tmisc1.0.1tmod0.50.13
tmvnsim1.0-2tmvtnorm1.6
tnet3.0.16tokenizers0.3.0
tokenizers.bpe0.1.3topicdoc0.1.1
topicmodels0.2-16topicmodels.etm0.1.0
topmodel0.7.5topologyGSA1.5.0
toprdata1.0.2torch0.13.0
torchaudio0.3.1.9000torchdatasets0.3.1
torchvision0.6.0tpr0.3-3
tracerer2.2.3trackdem0.7.2
trackdf0.3.3trackdown1.1.1
trackeR1.6.0trackeRapp1.2
TrackReconstruction1.3tractor.base3.4.2
traipse0.3.0trajectories0.2-8
TrajectoryUtils1.12.0trajr1.5.1
transformr0.1.5transfR1.0.11
TransPhylo1.4.5trapezoid2.0-2
traudem1.0.3tree1.0-43
treebalance1.2.0treebase0.1.5
TreeBUGS1.5.0treedater0.5.0
TreeDist2.7.0treefit1.0.2
treeio1.28.0treemap2.4-4
TreeSearch1.5.1TreeSim2.4
treespace1.1.4.3TreeTools1.11.1
trend1.1.6trendeval0.1.0
trending0.1.0TrialSize1.4
triangle1.0triebeard0.4.1
trimcluster0.1-5trip1.10.0
tripack1.3-9.1tripEstimation0.0-46
TripleR1.5.4TruncatedNormal2.2.2
truncdist1.0-2truncnorm1.0-9
truncreg0.2-5trust0.1-8
trustOptim0.8.7.3tryCatchLog1.3.1
TSA1.3.1TSANN0.1.0
tsbox0.4.1tsBSS1.0.0
TSCAN1.42.0TSclust1.3.1
tscount1.4.3tsdataleaks2.1.1
tsdb1.1-0tsdecomp0.2
TSdeeplearning0.1.0tsdisagg20.1.0
TSdisaggregation2.0.0TSdist3.7.1
tsdistributions1.0.1tsDyn11.0.4.1
TSEAL0.1.2TSEntropies0.9
tseries0.10-56tseriesChaos0.1-13.1
tseriesEntropy0.7-2tseriesTARMA0.3-4
tsfeatures1.1.1tsfknn0.6.0
tsgarch1.0.2tsibble1.1.4
tsibbledata0.4.1tsibbletalk0.1.0
tsintermittent1.10tsiR0.4.3
TSLSTM0.1.0TSLSTMplus1.0.4
tsmethods1.0.1tsModel0.6-1
tsne0.1-3.1tsnet0.1.0
tsoutliers0.6-10TSP1.2-4
tsPI1.0.4TSrepr1.1.0
tsrobprep0.3.2tssim0.1.7
TSstudio0.1.7tstests1.0.0
TSTutorial1.2.7tsutils0.9.4
tswge2.1.0tth4.16-0
TTR0.24.4tufterhandout1.2.1
tune1.2.1TUWmodel1.1-1
tvm0.5.2twdtw1.0-1
tweedie2.3.5tweenr2.0.3
twosamples2.0.1TxDb.Hsapiens.UCSC.hg19.knownGene3.2.2
TxDb.Hsapiens.UCSC.hg38.knownGene3.18.0txtq0.2.4
tzdb0.4.0uaparserjs0.3.5
ubiquity2.0.3ucminf1.2.1
UComp4.0.2UCSC.utils1.0.0
udpipe0.8.11ufRisk1.0.7
ugatsdb0.2.3uGMAR3.4.5
umap0.2.10.0uncmbb0.2.2
unglue0.1.0UnifiedDoseFinding0.1.10
unifir0.2.4units0.8-5
univOutl0.4unrepx1.0-2
unrtf1.4.5UpSetR1.4.0
uptasticsearch0.4.0urca1.3-4
urlchecker1.0.1urlshorteneR1.5.7
urltools1.7.3uroot2.1-3
USA.state.boundaries1.0.1usdata0.3.1
usethis2.2.3usmap0.7.1
usmapdata0.3.0utf81.2.4
utility1.4.6uuid1.2-0
uwot0.2.2V84.4.2
VALERIE1.1.0validate1.1.5
validatetools0.5.2valr0.8.1
VAM1.1.0vapour0.10.0
VAR.etp1.1varbvs2.6-10
VARDetect0.1.8vardiag0.2-1
vardpoor0.20.1VaRES1.0.2
vars1.6-1VARshrink0.3.1
varycoef0.3.4VCA1.5.1
vcd1.4-12vcdExtra0.8-5
vcr1.2.2vctrs0.6.5
vdg1.2.3VedicDateTime0.1.9
vegan2.6-6.1vegawidget0.5.0
vegperiod0.4.0VennDiagram1.7.3
venneuler1.1-4VGAM1.1-11
VGAMdata1.1-9vglmer1.0.3
vhica0.2.8VIC50.2.6
VIM6.2.2VineCopula2.5.0
vines1.1.5vip0.4.1
viridis0.6.5viridisLite0.4.2
visNetwork2.1.2visualize4.5.0
vkR0.2volatilityTrader1.0.1
volcano3D2.0.9volleystat0.2.0
vpc1.2.2vroom1.6.5
vrtest1.2vsn3.72.0
W3CMarkupValidator0.1-7waiter0.2.5
waldo0.5.2warp0.2.1
washdata0.1.4WASP1.4.3
waterData1.0.8waterquality1.0.0
WaveletComp1.1wavelets0.3-0.2
waveslim1.8.5wavethresh4.7.2
wavScalogram1.1.3waywiser0.5.1
wbstats1.0.4wCorr1.9.8
WDI2.7.8wdm0.2.4
wdman0.2.6WebAnalytics0.9.12
webchem1.3.0webdriver1.0.6
WebGestaltR0.4.6webmockr0.9.0
webreadr0.4.0webshot0.5.5
webshot20.1.1websocket1.4.1
webutils1.2.0wehoop2.0.0
WeightedPortTest1.1WeightIt1.1.0
weights1.0.4welo0.1.4
WeMix4.0.3WGCNA1.72-5
WH1.1.1whisker0.4.1
whitebox2.4.0whitening1.4.0
whoami1.3.0widgetframe0.3.1
widgetTools1.82.0WikidataQueryServiceR1.0.0
WikidataR2.3.3WikipediR1.7.1
wikitaxa0.4.0wildlifeDI1.0.0
wilson2.4.2windex2.0.8
wINEQ1.2.0withr3.0.0
wk0.9.1wktmo1.0.5
wkutils0.1.3wnl0.8.1
wooldridge1.4-3worcs0.1.14
word2vec0.4.0wordcloud2.6
wordnet0.1-17workflowr1.7.1
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worldfootballR0.6.2worldmet0.9.8
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wpp20191.1-1wql1.0.1
WrightMap1.3writexl1.5.0
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WufooR1.0.1x121.10.3
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XBRL0.99.19.1xfun0.45
xgboost1.7.7.1xgxr1.1.2
XLConnect1.0.10xlsx0.6.5
xlsxjars0.6.1XML3.99-0.16.1
xml21.3.6XML2R0.0.8
xmlrpc21.1xopen1.0.1
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xpose.nlmixr20.4.0xpose44.7.3
xslt1.4.5xtable1.8-4
xts0.14.0XVector0.44.0
xxIRT2.1.2yaImpute1.0-34
yaml2.3.8yardstick1.3.1
yesno0.1.2yhatr0.15.1
yorkr0.0.42ypssc1.1.0
yuima1.15.27yulab.utils0.1.4
zeallot0.1.0zen4R0.10
zic0.9.1ZIM1.1.0
ZINARp0.1.0zip2.3.1
zipfR0.6-70zlib1.0.3
zlibbioc1.50.0zoo1.8-12
ZRA0.2ztable0.2.3
zTree1.0.7zyp0.11-1

JupyterHub is a multi-user server for Jupyter notebooks, enabling multiple users to access and run Jupyter notebook environments simultaneously, often used in educational, research, and collaborative environments.

Default user: jhub-admin

Please sign up and set your password for jhub-admin when you start the server for the first time. Different from regular users, jhub-admin is automatically authorized to log in after the password is created.

http is supported out of box.

Startup page

After the instance is started, you can access the JupyterHub Server with its public IP address. For example, if the IP address is 10.11.12.13, typing http://10.11.12.13 in the browser will bring you to the following startup page:

main page

Sign-up page

When the JupyterHub Server is activated, a default user "jhub-admin" is created. The first time you access the server, a password need to be set for "jhub-admin".

main page

jupyterlab

main page

Authorize page

When creating new users, an authorization step is needed at "http://10.11.12.13/hub/authorize"

main page

Change password

The password can be changed at "http://10.11.12.13/hub/change-password"

main page

Release Notes

Installed the popular data science packages such as tensorflow, torch, datascience, mlpack, mlflow and xgboost.

Python version: 3.9.5

Python packages

packageversionpackageversion
absl-py2.1.0alembic1.13.2
altair5.3.0annotated-types0.7.0
anyio4.4.0argon2-cffi23.1.0
argon2-cffi-bindings21.2.0arrow1.3.0
arviz0.17.1asgiref3.8.1
asttokens2.4.1astunparse1.6.3
async-generator1.10async-lru2.0.4
attrs23.2.0automat22.10.0
babel2.15.0bayesian-optimization1.5.0
bcrypt4.1.3beautifulsoup44.12.3
black24.4.2bleach6.1.0
blinker1.8.2blis0.7.11
bokeh3.4.2boruta0.3
bottleneck1.4.0branca0.7.2
cachetools5.3.3catalogue2.0.10
catboost1.2.5certifi2024.6.2
certipy0.1.3cffi1.16.0
charset-normalizer3.3.2click8.1.7
cloudpathlib0.18.1cloudpickle3.0.0
cmake3.29.6cmdstanpy1.2.4
colorama0.4.6colorlog6.8.2
colorlover0.3.0comm0.2.2
confection0.1.5constantly23.10.4
contourpy1.2.1coverage7.5.4
cryptography42.0.8cssselect1.2.0
cufflinks0.17.3cycler0.12.1
cymem2.0.8cython0.29.37
dash2.17.1dash-core-components2.0.0
dash-html-components2.0.0dash-table5.0.0
dask2024.6.2databricks-cli0.18.0
datascience0.17.6deap1.4.1
debugpy1.8.2decorator5.1.1
defusedxml0.7.1dill0.3.8
django4.2.13dm-tree0.1.8
dnspython2.6.1docker7.1.0
eli50.13.0email-validator2.2.0
entrypoints0.4exceptiongroup1.2.1
executing2.0.1facets1.1.0
fairlearn0.10.0fastapi0.111.0
fastapi-cli0.0.4fastjsonschema2.20.0
fastprogress1.0.3filelock3.15.4
flake87.1.0flask3.0.3
flatbuffers24.3.25folium0.17.0
fonttools4.53.0fqdn1.5.1
fsspec2024.6.1funcy2.0
future1.0.0gast0.6.0
gensim4.3.2geopandas1.0.0
gitdb4.0.11gitpython3.1.43
google-pasta0.2.0graphviz0.8.4
greenlet3.0.3grpcio1.64.1
gunicorn22.0.0h110.14.0
h5netcdf1.3.0h5py3.11.0
hdbscan0.8.37holidays0.52
html5lib1.1htmlmin0.1.12
httpcore1.0.5httptools0.6.1
httpx0.27.0huggingface-hub0.23.4
hyperlink21.0.0hyperopt0.2.7
idna3.7imagehash4.3.1
imageio2.34.2imbalanced-learn0.12.3
imblearn0.0importlib-metadata8.0.0
importlib-resources6.4.0incremental22.10.0
iniconfig2.0.0ipykernel6.29.5
ipython8.18.1ipywidgets8.1.3
isoduration20.11.0isort5.13.2
itemadapter0.9.0itemloaders1.3.1
itsdangerous2.2.0jedi0.19.1
jinja23.1.4jmespath1.0.1
joblib1.4.2json50.9.25
jsonpointer3.0.0jsonschema4.22.0
jsonschema-specifications2023.12.1jupyter1.0.0
jupyter-client8.6.2jupyter-console6.6.3
jupyter-core5.7.2jupyter-events0.10.0
jupyter-lsp2.2.5jupyter-server2.14.1
jupyter-server-terminals0.5.3jupyter-telemetry0.1.0
jupyterhub3.1.1jupyterhub-nativeauthenticator1.2.0
jupyterlab4.2.3jupyterlab-pygments0.3.0
jupyterlab-server2.27.2jupyterlab-widgets3.0.11
keras3.4.1keras-tuner1.4.7
kiwisolver1.4.5kmodes0.12.2
kt-legacy1.0.5langcodes3.4.0
language-data1.2.0lazy-loader0.4
libclang18.1.1lightgbm4.4.0
lime0.2.0.1lit18.1.8
llvmlite0.43.0locket1.0.0
lucid0.3.8lxml5.2.2
mako1.3.5marisa-trie1.2.0
markdown3.6markdown-it-py3.0.0
markupsafe2.1.5matplotlib3.9.0
matplotlib-inline0.1.7matplotlib-venn0.11.10
mccabe0.7.0mdurl0.1.2
missingno0.5.2mistune3.0.2
ml-dtypes0.3.2mlflow1.27.0
mlpack4.3.0.post2mlxtend0.23.1
more-itertools10.3.0mpld30.5.10
mpmath1.3.0multimethod1.4
murmurhash1.0.10mxnet1.9.1
mypy-extensions1.0.0namex0.0.8
nbclient0.10.0nbconvert7.16.4
nbformat5.10.4nest-asyncio1.6.0
networkx3.2.1nibabel5.2.1
nilearn0.10.4nltk3.8.1
notebook7.2.1notebook-shim0.2.4
numba0.60.0numexpr2.10.1
numpy1.26.4nvidia-cublas-cu1111.10.3.66
nvidia-cuda-cupti-cu1111.7.101nvidia-cuda-nvrtc-cu1111.7.99
nvidia-cuda-runtime-cu1111.7.99nvidia-cudnn-cu118.5.0.96
nvidia-cufft-cu1110.9.0.58nvidia-curand-cu1110.2.10.91
nvidia-cusolver-cu1111.4.0.1nvidia-cusparse-cu1111.7.4.91
nvidia-nccl-cu112.14.3nvidia-nccl-cu122.22.3
nvidia-nvtx-cu1111.7.91oauthlib3.2.2
onetimepass1.0.1opencv-python4.10.0.84
opt-einsum3.3.0optree0.11.0
optuna3.6.1orjson3.10.5
overrides7.7.0packaging24.1
pamela1.1.0pandas2.2.2
pandas-profiling3.0.0pandocfilters1.5.1
parsel1.9.1parso0.8.4
partd1.4.2pathspec0.12.1
patsy0.5.6pexpect4.9.0
phik0.12.4pillow10.4.0
platformdirs4.2.2plotly5.22.0
pluggy1.5.0preshed3.0.9
prometheus-client0.20.0prometheus-flask-exporter0.23.0
prompt-toolkit3.0.47prophet1.1.5
protego0.3.1protobuf4.25.3
psutil6.0.0ptyprocess0.7.0
pure-eval0.2.2py4j0.10.9.7
pyarrow16.1.0pyasn10.6.0
pyasn1-modules0.4.0pycaret2.2.2
pycodestyle2.12.0pycparser2.22
pydantic2.8.0pydantic-core2.20.0
pydeck0.9.1pydispatcher2.0.7
pydot2.0.0pyflakes3.2.0
pygments2.18.0pyjwt2.8.0
pyldavis3.4.1pymc33.11.4
pynndescent0.5.13pyod2.0.1
pyogrio0.9.0pyopengl3.1.7
pyopenssl24.1.0pyparsing3.1.2
pyproj3.6.1pytest8.2.2
pytest-cov5.0.0python-dateutil2.9.0.post0
python-dotenv1.0.1python-json-logger2.0.7
python-multipart0.0.9pytz2024.1
pywavelets1.6.0pyyaml6.0.1
pyzmq26.0.3qtconsole5.5.2
qtpy2.4.1querystring-parser1.2.4
queuelib1.7.0referencing0.35.1
regex2024.5.15requests2.32.3
requests-file2.1.0retrying1.3.4
rfc3339-validator0.1.4rfc3986-validator0.1.1
rich13.7.1rpds-py0.18.1
ruamel-yaml0.18.6ruamel-yaml-clib0.2.8
safetensors0.4.3scikit-base0.8.1
scikit-image0.24.0scikit-learn1.5.0
scikit-plot0.3.7scipy1.13.1
scrapy2.11.2seaborn0.13.2
semver3.0.2send2trash1.8.3
service-identity24.1.0setuptools70.2.0
shap0.46.0shapely2.0.4
shellingham1.5.4six1.16.0
sktime0.30.1slicer0.0.8
smart-open7.0.4smmap5.0.1
sniffio1.3.1soupsieve2.5
spacy3.7.5spacy-legacy3.0.12
spacy-loggers1.0.5sqlalchemy2.0.31
sqlparse0.5.0srsly2.4.8
stack-data0.6.3stanio0.5.0
starlette0.37.2statsmodels0.14.2
stopit1.1.2streamlit1.36.0
sympy1.12.1tabulate0.9.0
tangled-up-in-unicode0.1.0tenacity8.4.2
tensorboard2.16.2tensorboard-data-server0.7.2
tensorflow2.16.2tensorflow-io-gcs-filesystem0.37.1
tensorflow-probability0.24.0termcolor2.4.0
terminado0.18.1textblob0.18.0.post0
theano-pymc1.1.2thinc8.2.5
threadpoolctl3.5.0tifffile2024.6.18
tinycss21.3.0tldextract5.1.2
tokenizers0.19.1toml0.10.2
tomli2.0.1toolz0.12.1
torch2.0.1tornado6.4.1
tpot0.12.2tqdm4.66.4
traitlets5.14.3transformers4.42.3
triton2.0.0twisted24.3.0
typer0.12.3types-python-dateutil2.9.0.20240316
typing-extensions4.12.2tzdata2024.1
ujson5.10.0umap-learn0.5.6
update-checker0.18.0uri-template1.3.0
urllib32.2.2uvicorn0.30.1
uvloop0.19.0vega2.6.0
visions0.7.1w3lib2.2.1
wasabi1.1.3watchdog4.0.1
watchfiles0.22.0wcwidth0.2.13
weasel0.4.1webcolors24.6.0
webencodings0.5.1websocket-client1.8.0
websockets12.0werkzeug3.0.3
wheel0.43.0widgetsnbextension4.0.11
wordcloud1.9.3wrapt1.16.0
xarray2024.6.0xarray-einstats0.7.0
xgboost2.1.0xyzservices2024.6.0
yellowbrick1.5zipp3.19.2
zope-interface6.4.post2

Linux with GUI Desktop

After the instance is started, you can access the Linux with GUI Desktop through Microsoft Remote Desktop.

Username and password

The default username is elm and the password is the instance ID.

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XFCE Desktop Environment

Steps to connect to the remote Linux GUI desktop

Install Microsoft Remote Desktop

The Microsoft Remote Desktop can be found from App Store (for Mac users).

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Start Microsoft Remote Desktop

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Add PC

The public address (like 54.198.198.85) is used for the PC name.

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Add a User Account

The default username is elm and the password is the instance ID.

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Accept the certificate

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The PC is added

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Clicking on the PC will connect to the remote Linux Desktop

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Log out of the Linux GUI Desktop

Select Logout

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Click Logout

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Video Tutorials


At Elm Computing, we offer a range of code optimization services to accelerate the performance of your Python or R scripts. Whether you're dealing with computationally intensive tasks or working on large datasets, our optimization techniques can streamline your code and deliver faster results.

Parallelization Techniques

Parallelization is a powerful approach to leverage the capabilities of modern computing architectures and accelerate code execution. Our team will analyze your code and identify opportunities for parallelization. We'll implement techniques such as:

  • Multi-Threading: Utilize multiple threads to execute independent tasks concurrently, maximizing CPU utilization and reducing execution time.

  • Multi-Processing: Harness the power of multiple processors or cores to execute code in parallel, enabling efficient computation and faster results.

  • Distributed Computing: Distribute workload across multiple CPUs or nodes to tackle complex and resource-intensive tasks, achieving exceptional scalability and speedup.

High-Performance Languages

In addition to parallelization, we offer expertise in utilizing high-performance languages to optimize your code. We can assist you in porting critical sections of your code to languages like:

  • C: Leverage the speed and low-level control of C programming to improve the performance of computationally intensive sections.

  • Fortran: Harness the power of Fortran's numerical computing capabilities and its ability to optimize array operations for faster execution.

  • Rust: Unlock the performance potential of Rust, a modern systems programming language known for its safety, speed, and low-level control.

Privacy Policy

At Elm Computing, we are committed to protecting our customers' right to privacy and data security. This privacy policy outlines our practices for collecting and using customer information.

We only access or collect information that you voluntarily provide to us via email or other contact methods. We do not sell, rent, or otherwise disclose personal information to third parties as part of our standard business practices. The information you provide is used to respond to your inquiry or request. In the future, we may contact you by email or other communications to inform you of upcoming changes or improvements to our products and services or updates to this Privacy Policy, unless you request otherwise.

You have the right to opt out of any future contact from us and to express any concerns about our use of your personal data by contacting us via email.

Please note that this website contains links to other sites, and we are not responsible for the privacy practices or content of those sites. We encourage you to review the privacy statements of any site that collects personal information or data.

Contact Us

At Elm Computing, we're always here to help you with any questions or concerns you may have about our products and services. Whether you're a new customer looking to learn more about our offerings, or an existing customer needing technical support, we're happy to assist you in any way we can. To get in touch with us, please send us an email at support@elmcomputing.io. Our support team will do their best to respond to your inquiries as quickly as possible. Thank you for choosing Elm Computing.