RStudio Server
R: 4.3.0
rstudio-server: 2023.12.1-402
Release Notes
Install popular Bioconductor packages.
R: 4.3.0; rstudio-server: 2023.12.1-402
R packages (3829)
| package | version | package | version |
|---|---|---|---|
| a4 | 1.50.1 | a4Base | 1.50.0 |
| a4Classif | 1.50.0 | a4Core | 1.50.0 |
| a4Preproc | 1.50.0 | a4Reporting | 1.50.0 |
| ABarray | 1.70.0 | abind | 1.4-5 |
| abseqR | 1.20.0 | ABSSeq | 1.56.0 |
| acde | 1.32.0 | ACE | 1.20.0 |
| aCGH | 1.80.0 | ACME | 2.58.0 |
| ada | 2.0-5 | adabag | 5.0 |
| ADaCGH2 | 2.42.0 | ADAM | 1.18.0 |
| ADAMgui | 1.18.0 | additivityTests | 1.1-4.1 |
| adductData | 1.18.0 | adductomicsR | 1.18.0 |
| ade4 | 1.7-22 | adehabitatLT | 0.3.27 |
| adehabitatMA | 0.3.16 | ADGofTest | 0.3 |
| ADImpute | 1.12.0 | admisc | 0.35 |
| adSplit | 1.72.0 | adverSCarial | 1.0.0 |
| AffiXcan | 1.20.0 | affxparser | 1.74.0 |
| affy | 1.80.0 | affycomp | 1.78.0 |
| affyContam | 1.60.0 | affycoretools | 1.74.0 |
| affydata | 1.50.0 | affyILM | 1.54.0 |
| affyio | 1.72.0 | affylmGUI | 1.76.0 |
| affyPLM | 1.78.0 | AffyRNADegradation | 1.48.0 |
| AGDEX | 1.50.0 | aggregateBioVar | 1.12.0 |
| aggregation | 1.0.1 | agilp | 3.34.0 |
| AgiMicroRna | 2.52.0 | agricolae | 1.3-7 |
| AHMassBank | 1.2.1 | AhoCorasickTrie | 0.1.2 |
| AICcmodavg | 2.3-3 | AIMS | 1.34.0 |
| airpart | 1.10.0 | airway | 1.22.0 |
| akima | 0.6-3.4 | akmbiclust | 0.1.0 |
| alabama | 2023.1.0 | alabaster | 1.2.0 |
| alabaster.base | 1.2.1 | alabaster.bumpy | 1.2.0 |
| alabaster.files | 1.0.0 | alabaster.mae | 1.2.0 |
| alabaster.matrix | 1.2.0 | alabaster.ranges | 1.2.0 |
| alabaster.sce | 1.2.0 | alabaster.schemas | 1.2.0 |
| alabaster.se | 1.2.0 | alabaster.spatial | 1.2.0 |
| alabaster.string | 1.2.0 | alabaster.vcf | 1.2.0 |
| ALDEx2 | 1.34.0 | alevinQC | 1.18.0 |
| AlgDesign | 1.2.1 | ALL | 1.44.0 |
| AllelicImbalance | 1.40.0 | alluvial | 0.1-2 |
| AlphaBeta | 1.16.0 | AlpsNMR | 4.4.0 |
| altcdfenvs | 2.64.0 | amap | 0.8-19 |
| AMARETTO | 1.18.0 | AMOUNTAIN | 1.28.0 |
| amplican | 1.24.0 | analogue | 0.17-6 |
| Anaquin | 2.26.0 | ANCOMBC | 2.4.0 |
| AneuFinder | 1.30.0 | AneuFinderData | 1.30.0 |
| ANF | 1.24.1 | animalcules | 1.18.3 |
| animation | 2.7 | annaffy | 1.74.0 |
| anndata | 0.7.5.6 | annmap | 1.44.0 |
| annotate | 1.80.0 | AnnotationDbi | 1.64.1 |
| AnnotationFilter | 1.26.0 | AnnotationForge | 1.44.0 |
| AnnotationHub | 3.10.0 | AnnotationHubData | 1.32.1 |
| annotationTools | 1.76.0 | annotatr | 1.28.0 |
| anota | 1.50.0 | anota2seq | 1.24.0 |
| antiProfiles | 1.42.0 | AnVIL | 1.14.2 |
| AnVILBilling | 1.12.0 | AnVILPublish | 1.12.0 |
| AnVILWorkflow | 1.2.0 | anytime | 0.3.9 |
| aod | 1.3.3 | aods3 | 0.4-1.2 |
| APAlyzer | 1.16.0 | apcluster | 1.4.11 |
| apComplex | 2.68.0 | ape | 5.7-1 |
| apeglm | 1.24.0 | APL | 1.6.1 |
| aplot | 0.2.2 | appreci8R | 1.20.2 |
| archive | 1.1.7 | argparse | 2.2.2 |
| aricode | 1.0.3 | arm | 1.13-1 |
| aroma.affymetrix | 3.2.2 | aroma.apd | 0.7.0 |
| aroma.core | 3.3.1 | aroma.light | 3.32.0 |
| ArrayExpress | 1.62.0 | arrayhelpers | 1.1-0 |
| arrayMvout | 1.60.0 | arrayQuality | 1.80.0 |
| arrayQualityMetrics | 3.58.0 | ARRmData | 1.38.0 |
| ARRmNormalization | 1.42.0 | arrow | 15.0.1 |
| artMS | 1.20.0 | arules | 1.7-7 |
| ASAFE | 1.28.0 | ASEB | 1.46.3 |
| ASGSCA | 1.36.0 | ash | 1.0-15 |
| ashr | 2.2-63 | ASICS | 2.18.1 |
| askpass | 1.2.0 | ASpli | 2.12.0 |
| assertive.base | 0.0-9 | assertive.files | 0.0-2 |
| assertive.numbers | 0.0-2 | assertive.sets | 0.0-3 |
| assertthat | 0.2.1 | AssessORF | 1.20.0 |
| ASSET | 2.20.0 | ASSIGN | 1.38.0 |
| ASURAT | 1.6.0 | ATACCoGAPS | 1.4.0 |
| ATACseqQC | 1.26.0 | ATACseqTFEA | 1.4.0 |
| atena | 1.8.0 | atSNP | 1.18.0 |
| attempt | 0.3.1 | attract | 1.54.0 |
| AUCell | 1.24.0 | autonomics | 1.10.2 |
| available | 1.1.0 | AWFisher | 1.16.0 |
| aws | 2.5-5 | aws.s3 | 0.3.21 |
| aws.signature | 0.6.0 | awsMethods | 1.1-1 |
| awst | 1.10.0 | BaalChIP | 1.28.0 |
| babelgene | 22.9 | backbone | 2.1.3 |
| backports | 1.4.1 | bacon | 1.30.0 |
| BADER | 1.40.0 | BadRegionFinder | 1.30.0 |
| BAGS | 2.42.0 | ballgown | 2.34.0 |
| bambu | 3.4.0 | bamlss | 1.2-3 |
| bamsignals | 1.34.0 | BANDITS | 1.18.1 |
| bandle | 1.6.0 | banocc | 1.26.0 |
| barcodetrackR | 1.10.0 | base64 | 2.0.1 |
| base64enc | 0.1-3 | base64url | 1.4 |
| basecallQC | 1.26.0 | baseline | 1.3-5 |
| BaseSpaceR | 1.46.0 | Basic4Cseq | 1.38.0 |
| BASiCS | 2.14.0 | BASiCStan | 1.4.0 |
| BasicSTARRseq | 1.30.0 | basilisk | 1.14.3 |
| basilisk.utils | 1.14.1 | batchelor | 1.18.1 |
| BatchJobs | 1.9 | BatchQC | 1.30.0 |
| batchtools | 0.9.17 | BayesKnockdown | 1.28.0 |
| bayesm | 3.1-6 | BayesSpace | 1.12.0 |
| bayNorm | 1.20.0 | baySeq | 2.36.0 |
| BB | 2019.10-1 | BBCAnalyzer | 1.32.0 |
| BBmisc | 1.13 | bbmle | 1.0.25.1 |
| bbotk | 0.8.0 | bcellViper | 1.38.0 |
| BCRANK | 1.64.0 | bcSeq | 1.24.0 |
| bdsmatrix | 1.3-7 | beachmat | 2.18.1 |
| beachmat.hdf5 | 1.0.0 | beadarray | 2.52.0 |
| beadarraySNP | 1.68.0 | BeadDataPackR | 1.54.0 |
| beanplot | 1.3.1 | BEARscc | 1.22.0 |
| BEAT | 1.40.0 | BEclear | 2.18.0 |
| beer | 1.6.0 | beeswarm | 0.4.0 |
| bench | 1.1.3 | benchdamic | 1.8.2 |
| benchmarkme | 1.0.8 | benchmarkmeData | 1.0.4 |
| bestNormalize | 1.9.1 | betareg | 3.1-4 |
| bezier | 1.1.2 | BG2 | 1.2.0 |
| BgeeCall | 1.18.1 | BgeeDB | 2.28.0 |
| bgx | 1.68.3 | BH | 1.84.0-0 |
| BHC | 1.54.0 | BiasedUrn | 2.0.11 |
| bibtex | 0.5.1 | BicARE | 1.60.0 |
| biclust | 2.0.3.1 | BiFET | 1.22.0 |
| biganalytics | 1.1.21 | bigassertr | 0.1.6 |
| BiGGR | 1.38.0 | biglm | 0.9-2.1 |
| bigmelon | 1.28.0 | bigmemory | 4.6.4 |
| bigmemory.sri | 0.1.8 | bigparallelr | 0.3.2 |
| bigrquery | 1.5.1 | bigstatsr | 1.5.12 |
| billboarder | 0.4.1 | BindingSiteFinder | 2.0.0 |
| binom | 1.1-1.1 | binr | 1.1.1 |
| bioassayR | 1.40.0 | Biobase | 2.62.0 |
| biobroom | 1.34.0 | biobtreeR | 1.14.0 |
| bioCancer | 1.30.8 | BioCartaImage | 1.0.0 |
| BiocBaseUtils | 1.4.0 | BiocBook | 1.0.0 |
| BiocCheck | 1.38.2 | BiocFHIR | 1.4.0 |
| BiocFileCache | 2.10.1 | BiocGenerics | 0.48.1 |
| biocGraph | 1.64.0 | BiocHail | 1.2.0 |
| BiocHubsShiny | 1.2.0 | BiocIO | 1.12.0 |
| BiocManager | 1.30.22 | BiocNeighbors | 1.20.2 |
| BioCor | 1.26.0 | BiocParallel | 1.36.0 |
| BiocPkgTools | 1.20.0 | BiocSet | 1.16.1 |
| BiocSingular | 1.18.0 | BiocSklearn | 1.24.0 |
| BiocStyle | 2.30.0 | biocthis | 1.12.0 |
| BiocVersion | 3.18.1 | biocViews | 1.70.0 |
| BiocWorkflowTools | 1.28.0 | biodb | 1.10.0 |
| biodbChebi | 1.8.0 | biodbExpasy | 1.6.0 |
| biodbHmdb | 1.8.0 | biodbKegg | 1.8.0 |
| biodbLipidmaps | 1.8.0 | biodbMirbase | 1.5.0 |
| biodbNcbi | 1.6.0 | biodbNci | 1.6.0 |
| biodbUniprot | 1.8.0 | bioDist | 1.74.0 |
| biomaRt | 2.58.2 | biomartr | 1.0.7 |
| biomformat | 1.30.0 | BioMVCClass | 1.70.0 |
| biomvRCNS | 1.42.2 | BioNAR | 1.4.4 |
| BioNERO | 1.10.1 | BioNet | 1.62.0 |
| BioNetStat | 1.22.0 | BioQC | 1.30.0 |
| biosigner | 1.30.0 | Biostrings | 2.70.3 |
| BioTIP | 1.16.0 | biotmle | 1.26.0 |
| biovizBase | 1.50.0 | BiRewire | 3.34.0 |
| biscuiteer | 1.16.0 | biscuiteerData | 1.16.0 |
| BiSeq | 1.42.0 | bit | 4.0.5 |
| bit64 | 4.0.5 | bitops | 1.0-7 |
| biwt | 1.0.1 | blacksheepr | 1.16.0 |
| bladderbatch | 1.40.0 | BlandAltmanLeh | 0.3.1 |
| blima | 1.36.0 | BLMA | 1.26.0 |
| blme | 1.0-5 | blob | 1.2.4 |
| blockmodeling | 1.1.5 | BloodGen3Module | 1.10.0 |
| bluster | 1.12.0 | BMA | 3.18.17 |
| bmp | 0.3 | bnbc | 1.24.2 |
| bnem | 1.10.0 | bnlearn | 4.9.3 |
| bnstruct | 1.0.15 | BOBaFIT | 1.6.0 |
| bookdown | 0.38 | BoolNet | 2.1.9 |
| bootstrap | 2019.6 | borealis | 1.6.0 |
| BPRMeth | 1.28.0 | BRAIN | 1.48.0 |
| brainflowprobes | 1.16.0 | branchpointer | 1.28.0 |
| breakpointR | 1.20.0 | breakpointRdata | 1.20.0 |
| breastCancerVDX | 1.40.0 | brendaDb | 1.16.0 |
| brew | 1.0-10 | BRGenomics | 1.14.1 |
| brglm | 0.7.2 | BridgeDbR | 2.12.0 |
| brio | 1.1.4 | BRISC | 1.0.5 |
| broom | 1.0.5 | broom.helpers | 1.14.0 |
| broom.mixed | 0.2.9.4 | BrowserViz | 2.24.0 |
| bs4Dash | 2.3.3 | BSDA | 1.2.2 |
| BSgenome | 1.70.2 | BSgenome.Celegans.UCSC.ce2 | 1.4.0 |
| BSgenome.Drerio.UCSC.danRer7 | 1.4.0 | BSgenome.Ecoli.NCBI.20080805 | 1.3.1000 |
| BSgenome.Hsapiens.1000genomes.hs37d5 | 0.99.1 | BSgenome.Hsapiens.NCBI.GRCh38 | 1.3.1000 |
| BSgenome.Hsapiens.UCSC.hg18 | 1.3.1000 | BSgenome.Hsapiens.UCSC.hg19 | 1.4.3 |
| BSgenome.Hsapiens.UCSC.hg38 | 1.4.5 | BSgenome.Mmusculus.UCSC.mm10 | 1.4.3 |
| BSgenome.Mmusculus.UCSC.mm9 | 1.4.0 | BSgenomeForge | 1.2.1 |
| bslib | 0.6.1 | bsplus | 0.1.4 |
| bsseq | 1.38.0 | BubbleTree | 2.32.0 |
| BufferedMatrix | 1.66.0 | BufferedMatrixMethods | 1.66.0 |
| bugsigdbr | 1.8.4 | BUMHMM | 1.26.0 |
| bumphunter | 1.44.0 | BumpyMatrix | 1.10.0 |
| BUS | 1.58.0 | BUScorrect | 1.20.0 |
| BUSpaRse | 1.16.1 | BUSseq | 1.8.0 |
| butcher | 0.3.3 | BWStest | 0.2.3 |
| C50 | 0.1.8 | ca | 0.71.1 |
| cachem | 1.0.8 | CaDrA | 1.0.2 |
| CAEN | 1.10.0 | CAFE | 1.38.0 |
| CAGEfightR | 1.22.0 | cageminer | 1.8.0 |
| CAGEr | 2.8.0 | Cairo | 1.6-2 |
| calibrate | 1.7.7 | callr | 3.7.5 |
| calm | 1.16.0 | CAMERA | 1.58.0 |
| canceR | 1.36.7 | cancerclass | 1.46.0 |
| capushe | 1.1.2 | car | 3.1-2 |
| carData | 3.0-5 | cardelino | 1.4.0 |
| Cardinal | 3.4.3 | CardinalIO | 1.0.0 |
| caret | 6.0-94 | caretEnsemble | 2.0.3 |
| CARNIVAL | 2.12.0 | casper | 2.36.0 |
| CATALYST | 1.26.0 | catdata | 1.2.4 |
| Category | 2.68.0 | categoryCompare | 1.46.0 |
| CatEncoders | 0.1.1 | caTools | 1.18.2 |
| CausalR | 1.34.0 | cba | 0.2-23 |
| cbaf | 1.24.0 | CBEA | 1.2.0 |
| cBioPortalData | 2.14.2 | CBNplot | 1.2.1 |
| cbpManager | 1.10.0 | ccaPP | 0.3.3 |
| ccdata | 1.28.0 | ccfindR | 1.22.0 |
| ccImpute | 1.4.0 | ccmap | 1.28.0 |
| CCP | 1.2 | CCPlotR | 1.0.0 |
| CCPROMISE | 1.28.0 | ccrepe | 1.38.1 |
| ccTensor | 1.0.2 | CDFt | 1.2 |
| CDI | 1.0.2 | celaref | 1.20.0 |
| celda | 1.18.1 | celestial | 1.4.6 |
| CellaRepertorium | 1.12.0 | CellBarcode | 1.8.1 |
| cellbaseR | 1.26.0 | CellBench | 1.18.0 |
| celldex | 1.12.0 | cellHTS2 | 2.66.0 |
| CelliD | 1.10.1 | cellity | 1.30.0 |
| CellMapper | 1.28.0 | cellmigRation | 1.10.0 |
| CellMixS | 1.18.0 | CellNOptR | 1.48.0 |
| cellranger | 1.1.0 | cellscape | 1.26.0 |
| CellScore | 1.22.0 | CellTrails | 1.20.0 |
| cellxgenedp | 1.6.1 | CEMiTool | 1.26.0 |
| censcyt | 1.10.0 | Cepo | 1.8.0 |
| ceRNAnetsim | 1.14.1 | CeTF | 1.14.0 |
| CexoR | 1.40.0 | CFAssay | 1.36.0 |
| cfdnakit | 1.0.0 | cfDNAPro | 1.8.0 |
| cfTools | 1.2.0 | cfToolsData | 1.0.0 |
| CGEN | 3.38.0 | CGHbase | 1.62.0 |
| CGHcall | 2.64.0 | cghMCR | 1.60.0 |
| CGHnormaliter | 1.56.0 | CGHregions | 1.60.0 |
| ChAMP | 2.32.0 | ChAMPdata | 2.34.0 |
| changepoint | 2.2.4 | changepoint.np | 1.0.5 |
| checkmate | 2.3.1 | ChemmineOB | 1.40.0 |
| ChemmineR | 3.54.0 | chemometrics | 1.4.4 |
| CHETAH | 1.18.0 | Chicago | 1.30.0 |
| chihaya | 1.2.0 | chimeraviz | 1.28.0 |
| ChIPanalyser | 1.24.0 | ChIPComp | 1.32.0 |
| chipenrich | 2.26.0 | chipenrich.data | 2.26.0 |
| ChIPexoQual | 1.26.0 | ChIPpeakAnno | 3.36.1 |
| ChIPQC | 1.38.0 | ChIPseeker | 1.38.0 |
| chipseq | 1.52.0 | ChIPseqR | 1.56.0 |
| ChIPsim | 1.56.0 | ChIPXpress | 1.46.0 |
| ChIPXpressData | 1.40.0 | chk | 0.9.1 |
| chopsticks | 1.68.0 | chromDraw | 2.32.0 |
| ChromHeatMap | 1.56.0 | chromhmmData | 0.99.2 |
| chromPlot | 1.30.0 | ChromSCape | 1.12.0 |
| chromstaR | 1.28.0 | chromstaRData | 1.28.0 |
| chromVAR | 1.24.0 | chron | 2.3-61 |
| CHRONOS | 1.30.0 | cicero | 1.20.0 |
| CIMICE | 1.10.0 | CINdex | 1.30.0 |
| circlize | 0.4.16 | circRNAprofiler | 1.16.0 |
| CircSeqAlignTk | 1.4.0 | CircStats | 0.2-6 |
| circular | 0.5-0 | cisPath | 1.42.0 |
| CiteFuse | 1.14.0 | Ckmeans.1d.dp | 4.3.5 |
| ClassifyR | 3.6.5 | classInt | 0.4-10 |
| cleanUpdTSeq | 1.40.0 | cleaver | 1.40.0 |
| clevRvis | 1.2.0 | cli | 3.6.2 |
| clippda | 1.52.0 | clipper | 1.42.0 |
| clipr | 0.8.0 | cliProfiler | 1.8.0 |
| cliqueMS | 1.16.0 | clisymbols | 1.2.0 |
| clock | 0.7.0 | Clomial | 1.38.0 |
| clst | 1.50.0 | clstutils | 1.50.0 |
| clue | 0.3-65 | CluMSID | 1.18.0 |
| clustComp | 1.30.0 | clusterCons | 1.2 |
| clusterExperiment | 2.22.0 | ClusterJudge | 1.24.0 |
| clusterProfiler | 4.10.1 | ClusterR | 1.3.2 |
| clusterRepro | 0.9 | clusterSeq | 1.26.0 |
| ClusterSignificance | 1.30.0 | clusterSim | 0.51-3 |
| clusterStab | 1.74.0 | clustifyr | 1.14.0 |
| ClustIRR | 1.0.0 | clustree | 0.5.1 |
| clustvarsel | 2.3.4 | clv | 0.3-2.4 |
| clValid | 0.7 | CMA | 1.60.0 |
| cMAP | 1.15.1 | cMap2data | 1.38.0 |
| cmapR | 1.14.0 | cmdfun | 1.0.2 |
| cn.farms | 1.50.0 | cn.mops | 1.48.0 |
| CNAnorm | 1.48.0 | CNEr | 1.38.0 |
| CNORdt | 1.44.0 | CNORfeeder | 1.42.0 |
| CNORfuzzy | 1.44.0 | CNORode | 1.44.0 |
| CNTools | 1.58.0 | CNVfilteR | 1.16.0 |
| cnvGSA | 1.46.0 | CNViz | 1.10.0 |
| CNVMetrics | 1.6.0 | CNVPanelizer | 1.34.0 |
| CNVRanger | 1.18.1 | CNVrd2 | 1.40.0 |
| cobs | 1.3-8 | CoCiteStats | 1.74.0 |
| COCOA | 2.16.0 | coda | 0.19-4.1 |
| CodeDepends | 0.6.5 | codelink | 1.70.0 |
| CODEX | 1.34.0 | CoGAPS | 3.22.0 |
| cogena | 1.36.0 | cogeqc | 1.6.2 |
| Cogito | 1.8.0 | coGPS | 1.46.0 |
| COHCAP | 1.48.0 | COHCAPanno | 1.38.0 |
| coin | 1.4-3 | cola | 2.8.0 |
| collapse | 2.0.10 | collections | 0.3.7 |
| colorRamps | 2.3.4 | colorspace | 2.1-0 |
| colourpicker | 1.3.0 | colourvalues | 0.3.9 |
| comapr | 1.6.1 | combi | 1.14.0 |
| combinat | 0.0-8 | coMET | 1.34.0 |
| coMethDMR | 1.6.0 | common | 1.1.2 |
| commonmark | 1.9.1 | compareGroups | 4.8.0 |
| COMPASS | 1.40.0 | compcodeR | 1.38.0 |
| compEpiTools | 1.36.0 | ComplexHeatmap | 2.18.0 |
| ComplexUpset | 1.3.3 | compositions | 2.0-8 |
| CompoundDb | 1.6.0 | CompQuadForm | 1.4.3 |
| ComPrAn | 1.10.0 | compSPOT | 1.0.0 |
| concaveman | 1.1.0 | concordexR | 1.2.0 |
| condformat | 0.10.1 | condiments | 1.10.0 |
| CONFESS | 1.30.0 | config | 0.3.2 |
| configr | 0.3.5 | confintr | 1.0.2 |
| conflicted | 1.2.0 | conicfit | 1.0.4 |
| consensus | 1.20.0 | ConsensusClusterPlus | 1.66.0 |
| consensusDE | 1.20.0 | consensusOV | 1.24.0 |
| consensusSeekeR | 1.30.0 | consICA | 2.0.0 |
| ConsRank | 2.1.4 | CONSTANd | 1.10.0 |
| contiBAIT | 1.30.0 | contrast | 0.24.2 |
| conumee | 1.36.0 | convert | 1.78.0 |
| coop | 0.6-3 | copa | 1.70.0 |
| copula | 1.1-3 | CopyNumberPlots | 1.18.0 |
| coRdon | 1.20.0 | CoreGx | 2.6.1 |
| Cormotif | 1.48.0 | coro | 1.0.4 |
| corpcor | 1.6.10 | corral | 1.12.0 |
| CORREP | 1.68.0 | corrgram | 1.14 |
| corrplot | 0.92 | coseq | 1.26.0 |
| CoSIA | 1.2.0 | COSMIC.67 | 1.38.0 |
| cosmiq | 1.36.0 | cosmosR | 1.10.0 |
| COSNet | 1.36.0 | COTAN | 2.2.3 |
| countrycode | 1.5.0 | countsimQC | 1.20.0 |
| covEB | 1.28.0 | CoverageView | 1.40.0 |
| covr | 3.6.4 | covRNA | 1.28.0 |
| cowplot | 1.1.3 | cp4p | 0.3.6 |
| cplm | 0.7-12 | cpp11 | 0.4.7 |
| cpvSNP | 1.34.0 | cqn | 1.48.0 |
| crayon | 1.5.2 | credentials | 2.0.1 |
| CRImage | 1.50.0 | crisprBase | 1.6.0 |
| crisprBowtie | 1.6.0 | crisprBwa | 1.6.0 |
| crisprDesign | 1.4.0 | crisprScore | 1.6.0 |
| crisprScoreData | 1.6.0 | CRISPRseek | 1.42.0 |
| CrispRVariants | 1.30.0 | crisprVerse | 1.4.0 |
| crisprViz | 1.4.0 | crlmm | 1.60.0 |
| crmn | 0.0.21 | crossmeta | 1.28.0 |
| crosstalk | 1.2.1 | crul | 1.4.0 |
| CSAR | 1.54.0 | csaw | 1.36.1 |
| csdR | 1.8.0 | CSSQ | 1.14.0 |
| ctc | 1.76.0 | CTdata | 1.2.0 |
| CTDquerier | 2.10.0 | cTRAP | 1.20.0 |
| ctsGE | 1.28.0 | CTSV | 1.4.0 |
| cubature | 2.1.0 | Cubist | 0.4.2.1 |
| cummeRbund | 2.44.0 | CuratedAtlasQueryR | 1.0.1 |
| curatedTCGAData | 1.24.1 | curl | 5.2.1 |
| customCMPdb | 1.12.0 | customProDB | 1.42.1 |
| cvar | 0.5 | cvAUC | 1.1.4 |
| cvTools | 0.3.3 | CVXR | 1.0-12 |
| cyanoFilter | 1.10.0 | cycle | 1.56.0 |
| cyclocomp | 1.1.1 | cydar | 1.26.0 |
| CytoDx | 1.22.0 | CyTOFpower | 1.8.0 |
| cytofQC | 1.2.0 | CytoGLMM | 1.10.0 |
| cytoKernel | 1.8.0 | cytolib | 2.14.1 |
| cytomapper | 1.14.0 | cytoMEM | 1.6.0 |
| cytometree | 2.0.2 | CytoML | 2.14.0 |
| CytoPipeline | 1.2.0 | CytoPipelineGUI | 1.0.0 |
| cytoviewer | 1.2.0 | dada2 | 1.30.0 |
| dagLogo | 1.40.0 | daMA | 1.74.0 |
| DAMEfinder | 1.14.0 | DaMiRseq | 2.14.0 |
| DAPAR | 1.34.6 | DAPARdata | 1.32.1 |
| DART | 1.50.0 | dashboardthemes | 1.1.6 |
| data.table | 1.15.2 | data.tree | 1.1.0 |
| datamods | 1.4.5 | DataVisualizations | 1.3.2 |
| datawizard | 0.9.1 | DBI | 1.2.2 |
| dbplyr | 2.4.0 | dbscan | 1.1-12 |
| dcanr | 1.18.0 | DCATS | 1.0.0 |
| dce | 1.10.0 | dcGSA | 1.30.0 |
| ddCt | 1.58.0 | ddPCRclust | 1.22.0 |
| DDRTree | 0.1.5 | dearseq | 1.14.0 |
| debCAM | 1.20.0 | debrowser | 1.30.2 |
| DECIPHER | 2.30.0 | decompTumor2Sig | 2.18.0 |
| DeconRNASeq | 1.44.0 | deconstructSigs | 1.8.0 |
| decontam | 1.22.0 | decontX | 1.0.0 |
| deconvR | 1.8.0 | decoupleR | 2.8.0 |
| DeepPINCS | 1.10.0 | deepSNV | 1.48.0 |
| DEFormats | 1.30.0 | DegNorm | 1.12.0 |
| DEGraph | 1.54.0 | DEGreport | 1.38.5 |
| DEGseq | 1.56.1 | Delaporte | 8.3.0 |
| DelayedArray | 0.28.0 | DelayedDataFrame | 1.18.0 |
| DelayedMatrixStats | 1.24.0 | DelayedRandomArray | 1.10.0 |
| DelayedTensor | 1.8.0 | deldir | 2.0-4 |
| DELocal | 1.2.0 | deltaCaptureC | 1.16.0 |
| deltaGseg | 1.42.0 | DeMAND | 1.32.0 |
| DeMixT | 1.18.0 | demuxmix | 1.4.0 |
| demuxSNP | 1.0.0 | dendextend | 1.17.1 |
| densEstBayes | 1.0-2.2 | densvis | 1.12.1 |
| DEoptimR | 1.1-3 | DEP | 1.24.0 |
| DepecheR | 1.18.0 | DepInfeR | 1.6.0 |
| depmap | 1.16.0 | depmixS4 | 1.5-0 |
| DEqMS | 1.20.0 | derfinder | 1.36.0 |
| derfinderHelper | 1.36.0 | derfinderPlot | 1.36.0 |
| Deriv | 4.1.3 | desc | 1.4.3 |
| DEScan2 | 1.22.0 | DescTools | 0.99.54 |
| DESeq2 | 1.42.1 | DEsingle | 1.22.0 |
| deSolve | 1.40 | DESpace | 1.2.1 |
| destiny | 3.16.0 | DEsubs | 1.28.0 |
| devtools | 2.4.5 | DEWSeq | 1.16.2 |
| DExMA | 1.10.7 | DExMAdata | 1.10.0 |
| DEXSeq | 1.48.0 | DFP | 1.60.0 |
| DGEobj | 1.1.2 | DGEobj.utils | 1.0.6 |
| dgof | 1.4 | diagram | 1.6.5 |
| DiagrammeR | 1.0.11 | DIAlignR | 2.10.0 |
| diceR | 2.2.0 | dichromat | 2.0-0.1 |
| DiffBind | 3.12.0 | diffcoexp | 1.22.0 |
| DiffCorr | 0.4.3 | diffcyt | 1.22.0 |
| DifferentialRegulation | 2.0.3 | diffGeneAnalysis | 1.84.0 |
| diffHic | 1.34.0 | DiffLogo | 2.26.0 |
| diffobj | 0.3.5 | diffr | 0.1 |
| diffuStats | 1.22.0 | diffUTR | 1.10.0 |
| digest | 0.6.35 | diggit | 1.34.0 |
| Dino | 1.8.0 | diptest | 0.77-0 |
| dir.expiry | 1.10.0 | directlabels | 2024.1.21 |
| Director | 1.28.0 | directPA | 1.5.1 |
| DirichletMultinomial | 1.44.0 | DirichletReg | 0.7-1 |
| dirmult | 0.1.3-5 | discordant | 1.26.0 |
| DiscoRhythm | 1.18.0 | distances | 0.1.10 |
| distillery | 1.2-1 | distinct | 1.14.5 |
| distr | 2.9.3 | distrEx | 2.9.2 |
| distributional | 0.4.0 | distributions3 | 0.2.1 |
| dittoSeq | 1.14.2 | divergence | 1.18.0 |
| dixonTest | 1.0.4 | dks | 1.48.0 |
| DMCFB | 1.16.1 | DMCHMM | 1.24.0 |
| dml | 1.1.0 | DMRcaller | 1.34.0 |
| DMRcate | 2.16.1 | DMRScan | 1.24.0 |
| dmrseq | 1.22.1 | DMwR2 | 0.0.2 |
| DNABarcodeCompatibility | 1.18.0 | DNABarcodes | 1.32.0 |
| DNAcopy | 1.76.0 | DNAfusion | 1.4.0 |
| DNAshapeR | 1.30.0 | dnet | 1.1.7 |
| doBy | 4.6.20 | docopt | 0.7.1 |
| doFuture | 1.0.1 | doMC | 1.3.8 |
| DominoEffect | 1.22.0 | doParallel | 1.0.17 |
| doppelgangR | 1.30.0 | doRNG | 1.8.6 |
| dorothea | 1.14.1 | Doscheda | 1.24.0 |
| DOSE | 3.28.2 | doseR | 1.18.0 |
| doSNOW | 1.0.20 | dotCall64 | 1.1-1 |
| doubletrouble | 1.2.5 | downlit | 0.4.3 |
| downloader | 0.4 | downloadthis | 0.3.3 |
| dplyr | 1.1.4 | dqrng | 0.3.2 |
| drawer | 0.2.0.1 | drawProteins | 1.22.2 |
| drc | 3.0-1 | dreamlet | 1.0.3 |
| DrImpute | 1.0 | DRIMSeq | 1.30.0 |
| DriverNet | 1.42.0 | DropletUtils | 1.22.0 |
| drtmle | 1.1.2 | drugTargetInteractions | 1.10.1 |
| DrugVsDisease | 2.44.0 | DrugVsDiseasedata | 1.38.0 |
| DSS | 2.50.1 | dStruct | 1.8.0 |
| DT | 0.32 | DTA | 2.48.0 |
| dtangle | 2.0.9 | dtplyr | 1.3.1 |
| dtt | 0.1-2 | dtw | 1.23-1 |
| duckdb | 0.10.0 | Dune | 1.14.0 |
| dunn.test | 1.3.5 | dupRadar | 1.32.0 |
| dyebias | 1.62.0 | dynamicTreeCut | 1.63-1 |
| DynDoc | 1.80.0 | e1071 | 1.7-14 |
| earth | 5.3.3 | easier | 1.8.0 |
| easierData | 1.8.0 | easycsv | 1.0.8 |
| easylift | 1.0.0 | easyPubMed | 2.13 |
| easyreporting | 1.14.0 | easyRNASeq | 2.38.0 |
| EBarrays | 2.66.0 | EBcoexpress | 1.46.0 |
| EBImage | 4.44.0 | EBSEA | 1.30.0 |
| EBSeq | 2.0.0 | EBSeqHMM | 1.35.0 |
| echarts4r | 0.4.5 | ecolitk | 1.74.0 |
| ECOSolveR | 0.5.5 | ecp | 3.1.5 |
| Ecume | 0.9.1 | EDASeq | 2.36.0 |
| edge | 2.34.0 | edgeR | 4.0.16 |
| EDIRquery | 1.2.0 | eds | 1.4.0 |
| effsize | 0.8.1 | EGAD | 1.30.0 |
| egg | 0.4.5 | EGSEA | 1.30.1 |
| EGSEAdata | 1.30.0 | einsum | 0.1.2 |
| eiR | 1.42.0 | eisaR | 1.14.1 |
| elasticnet | 1.3 | elitism | 1.1.1 |
| ellipse | 0.5.0 | ellipsis | 0.3.2 |
| ELMER | 2.26.0 | ELMER.data | 2.26.0 |
| emdbook | 1.3.13 | emdist | 0.3-3 |
| EMDomics | 2.32.0 | emmeans | 1.10.0 |
| EmpiricalBrownsMethod | 1.30.0 | energy | 1.7-11 |
| english | 1.2-6 | EnhancedVolcano | 1.20.0 |
| enhancerHomologSearch | 1.8.3 | EnMCB | 1.14.0 |
| ENmix | 1.38.01 | EnrichedHeatmap | 1.32.0 |
| EnrichmentBrowser | 2.32.0 | enrichplot | 1.22.0 |
| enrichR | 3.2 | enrichTF | 1.18.0 |
| enrichViewNet | 1.0.0 | EnsDb.Hsapiens.v75 | 2.99.0 |
| EnsDb.Hsapiens.v79 | 2.99.0 | EnsDb.Hsapiens.v86 | 2.99.0 |
| EnsDb.Mmusculus.v79 | 2.99.0 | ensembldb | 2.26.0 |
| ensemblVEP | 1.44.0 | ensurer | 1.1 |
| entropy | 1.3.1 | enviPat | 2.6 |
| EnvStats | 2.8.1 | epialleleR | 1.10.0 |
| EpiCompare | 1.6.5 | epidecodeR | 1.10.0 |
| EpiDISH | 2.18.0 | epigenomix | 1.42.0 |
| epigraHMM | 1.10.0 | EpiMix | 1.4.0 |
| EpiMix.data | 1.4.0 | epimutacions | 1.6.1 |
| epimutacionsData | 1.6.0 | epiNEM | 1.26.0 |
| epiR | 2.0.70 | epistack | 1.8.0 |
| epistasisGA | 1.4.0 | EpiTxDb | 1.14.1 |
| epivizr | 2.32.0 | epivizrChart | 1.24.0 |
| epivizrData | 1.30.0 | epivizrServer | 1.30.0 |
| epivizrStandalone | 1.30.0 | erccdashboard | 1.36.0 |
| erma | 1.18.0 | ERSSA | 1.20.0 |
| esATAC | 1.24.0 | escape | 1.12.0 |
| escheR | 1.2.0 | esetVis | 1.28.2 |
| estimability | 1.5 | etrunct | 0.1 |
| eudysbiome | 1.32.0 | eulerr | 7.0.1 |
| eva | 0.2.6 | evaluate | 0.23 |
| evaluomeR | 1.18.0 | evd | 2.3-6.1 |
| EventPointer | 3.10.0 | evmix | 2.12 |
| EWCE | 1.10.2 | ewceData | 1.10.0 |
| Exact | 3.2 | exactRankTests | 0.8-35 |
| excelR | 0.4.0 | ExCluster | 1.20.0 |
| ExiMiR | 2.44.0 | exomeCopy | 1.48.0 |
| exomePeak2 | 1.14.3 | ExperimentHub | 2.10.0 |
| ExperimentHubData | 1.28.0 | ExperimentSubset | 1.12.0 |
| ExploreModelMatrix | 1.14.0 | expm | 0.999-9 |
| ExpressionAtlas | 1.30.0 | ExtDist | 0.7-2 |
| extraChIPs | 1.6.1 | extraDistr | 1.10.0 |
| extrafont | 0.19 | extrafontdb | 1.0 |
| extRemes | 2.1-4 | EZtune | 3.1.1 |
| faahKO | 1.42.0 | fabia | 2.48.0 |
| fabricatr | 1.0.2 | factDesign | 1.78.0 |
| factoextra | 1.0.7 | FactoMineR | 2.10 |
| factR | 1.4.0 | FamAgg | 1.30.0 |
| famat | 1.12.0 | fANCOVA | 0.6-1 |
| fansi | 1.0.6 | farver | 2.1.1 |
| fastcluster | 1.2.6 | fastDummies | 1.7.3 |
| fastICA | 1.2-4 | fastLiquidAssociation | 1.38.0 |
| fastmap | 1.1.1 | fastmatch | 1.1-4 |
| FastqCleaner | 1.20.0 | fastreeR | 1.6.0 |
| fastseg | 1.48.0 | fauxpas | 0.5.2 |
| fBasics | 4032.96 | fCCAC | 1.28.0 |
| fCI | 1.32.0 | FCPS | 1.3.4 |
| fcScan | 1.16.0 | fda | 6.1.8 |
| FDb.InfiniumMethylation.hg19 | 2.2.0 | fdrame | 1.74.0 |
| fdrtool | 1.2.17 | fds | 1.8 |
| FEAST | 1.10.0 | FeatSeekR | 1.2.0 |
| feature | 1.2.15 | fedup | 1.10.0 |
| FELLA | 1.22.0 | fenr | 1.0.5 |
| ff | 4.0.12 | ffpe | 1.46.0 |
| fftw | 1.0-8 | fftwtools | 0.9-11 |
| fGarch | 4032.91 | fgga | 1.10.2 |
| FGNet | 3.36.0 | fgsea | 1.28.0 |
| fields | 15.2 | filehash | 2.4-5 |
| filelock | 1.0.3 | filematrix | 1.3 |
| FilterFFPE | 1.12.0 | FindIT2 | 1.8.0 |
| findpython | 1.0.8 | fingerprint | 3.5.7 |
| FIs | 1.30.0 | FISHalyseR | 1.36.0 |
| fishpond | 2.8.0 | fission | 1.22.0 |
| fit.models | 0.64 | fitdistrplus | 1.1-11 |
| FitHiC | 1.28.0 | flagme | 1.58.0 |
| FLAMES | 1.8.0 | flashClust | 1.01-2 |
| flatxml | 0.1.1 | flexclust | 1.4-1 |
| flexdashboard | 0.6.2 | flexmix | 2.3-19 |
| flextable | 0.9.5 | float | 0.3-2 |
| flock | 0.7 | flowAI | 1.32.0 |
| flowBeads | 1.40.0 | flowBin | 1.38.0 |
| flowcatchR | 1.36.0 | flowCHIC | 1.36.0 |
| flowClean | 1.40.0 | flowClust | 3.40.0 |
| flowCore | 2.14.1 | flowCut | 1.12.0 |
| flowCyBar | 1.38.0 | flowDensity | 1.36.1 |
| flowFP | 1.60.0 | flowGate | 1.2.0 |
| flowGraph | 1.10.0 | flowMatch | 1.38.0 |
| flowMeans | 1.62.0 | flowMerge | 2.50.0 |
| flowPeaks | 1.48.0 | flowPloidy | 1.28.0 |
| flowPlots | 1.50.0 | FlowSOM | 2.10.0 |
| FlowSorted.Blood.450k | 1.40.0 | flowSpecs | 1.16.0 |
| flowStats | 4.14.1 | flowTime | 1.26.0 |
| flowTrans | 1.54.0 | flowViz | 1.66.0 |
| flowVS | 1.34.0 | flowWorkspace | 4.14.2 |
| fmcsR | 1.44.0 | FME | 1.3.6.3 |
| fmrs | 1.12.0 | fmsb | 0.7.6 |
| FMStable | 0.1-4 | FNN | 1.1.4 |
| fobitools | 1.10.0 | fontawesome | 0.5.2 |
| fontBitstreamVera | 0.1.1 | fontLiberation | 0.1.0 |
| fontquiver | 0.2.1 | forcats | 1.0.0 |
| foreach | 1.5.2 | forecast | 8.22.0 |
| forestplot | 3.1.3 | formatR | 1.14 |
| formattable | 0.2.1 | Formula | 1.2-5 |
| formula.tools | 1.7.1 | fpc | 2.2-11 |
| fracdiff | 1.5-3 | FRASER | 1.14.1 |
| frenchFISH | 1.14.0 | FreqProf | 0.0.1 |
| fresh | 0.2.0 | FRGEpistasis | 1.38.0 |
| frma | 1.54.0 | frmaTools | 1.54.0 |
| fs | 1.6.3 | FSelector | 0.34 |
| fst | 0.9.8 | fstcore | 0.9.18 |
| FunChIP | 1.28.0 | funtooNorm | 1.26.0 |
| furrr | 0.3.1 | FuseSOM | 1.4.0 |
| futile.logger | 1.4.3 | futile.options | 1.0.1 |
| future | 1.33.1 | future.apply | 1.11.1 |
| fuzzyjoin | 0.1.6 | GA | 3.2.4 |
| GA4GHclient | 1.26.0 | GA4GHshiny | 1.24.0 |
| gaga | 2.48.0 | gage | 2.52.0 |
| gaggle | 1.70.0 | gam | 1.22-3 |
| gamlss | 5.4-20 | gamlss.data | 6.0-6 |
| gamlss.dist | 6.1-1 | gap | 1.5-3 |
| gap.datasets | 0.0.6 | GAprediction | 1.28.0 |
| garfield | 1.30.0 | gargle | 1.5.2 |
| GARS | 1.22.0 | GateFinder | 1.22.0 |
| gatom | 1.0.0 | gbm | 2.1.9 |
| GBScleanR | 1.6.0 | gbutils | 0.5 |
| gcapc | 1.26.0 | gcatest | 2.2.0 |
| gclus | 1.3.2 | gCrisprTools | 2.8.0 |
| gcrma | 2.74.0 | gcspikelite | 1.40.0 |
| gdata | 3.0.0 | GDCRNATools | 1.22.0 |
| gDNAx | 1.0.1 | gDR | 1.0.0 |
| gDRcore | 1.0.1 | gDRimport | 1.0.0 |
| gDRstyle | 1.0.0 | gDRutils | 1.0.0 |
| GDSArray | 1.22.0 | gdsfmt | 1.38.0 |
| gdtools | 0.3.7 | geeM | 0.10.1 |
| geepack | 1.3.10 | geigen | 2.3 |
| GEM | 1.28.0 | gemini | 1.16.0 |
| gemma.R | 2.0.0 | genalg | 0.2.1 |
| genArise | 1.78.0 | geneAttribution | 1.28.0 |
| GeneBreak | 1.32.0 | geneClassifiers | 1.26.0 |
| GeneExpressionSignature | 1.48.0 | genefilter | 1.84.0 |
| genefu | 2.34.0 | GeneGA | 1.52.0 |
| GeneGeneInteR | 1.28.0 | geneLenDataBase | 1.38.0 |
| GeneMeta | 1.74.0 | GeneNet | 1.2.16 |
| GeneNetworkBuilder | 1.44.0 | GeneOverlap | 1.38.0 |
| geneplast | 1.28.0 | geneplotter | 1.80.0 |
| geneRecommender | 1.74.0 | GeneRegionScan | 1.58.0 |
| generics | 0.1.3 | geneRxCluster | 1.38.0 |
| GeneSelectMMD | 2.46.0 | GENESIS | 2.32.0 |
| GeneStructureTools | 1.22.0 | geNetClassifier | 1.42.0 |
| genetics | 1.3.8.1.3 | GeneticsPed | 1.64.0 |
| GeneTonic | 2.6.0 | geneXtendeR | 1.28.0 |
| GENIE3 | 1.24.0 | genieclust | 1.1.5-2 |
| genlasso | 1.6.1 | GENLIB | 1.1.10 |
| genoCN | 1.54.0 | genomation | 1.34.0 |
| GenomAutomorphism | 1.4.0 | GenomeInfoDb | 1.38.8 |
| GenomeInfoDbData | 1.2.11 | genomeIntervals | 1.58.0 |
| genomes | 3.32.0 | GenomicAlignments | 1.38.2 |
| GenomicDataCommons | 1.26.0 | GenomicDistributions | 1.10.0 |
| GenomicFeatures | 1.54.4 | GenomicFiles | 1.38.0 |
| genomicInstability | 1.8.0 | GenomicInteractionNodes | 1.6.0 |
| GenomicInteractions | 1.36.0 | GenomicOZone | 1.16.0 |
| GenomicPlot | 1.0.5 | GenomicRanges | 1.54.1 |
| GenomicScores | 2.14.3 | GenomicState | 0.99.15 |
| GenomicSuperSignature | 1.10.0 | GenomicTools.fileHandler | 0.1.5.9 |
| GenomicTuples | 1.36.0 | GenProSeq | 1.6.0 |
| GenSA | 1.1.14 | GenVisR | 1.34.0 |
| GeoDiff | 1.8.0 | GEOexplorer | 1.8.0 |
| GEOfastq | 1.10.0 | GEOmetadb | 1.64.0 |
| geometry | 0.4.7 | GeomxTools | 3.6.2 |
| GEOquery | 2.70.0 | geosphere | 1.5-18 |
| GEOsubmission | 1.54.0 | GeoTcgaData | 2.2.0 |
| gep2pep | 1.22.0 | gert | 2.0.1 |
| gespeR | 1.34.0 | getDEE2 | 1.12.0 |
| getopt | 1.20.4 | GetoptLong | 1.0.5 |
| getPass | 0.2-4 | geva | 1.10.0 |
| GEWIST | 1.46.0 | gfonts | 0.2.0 |
| gg4way | 1.0.2 | ggalluvial | 0.12.5 |
| GGally | 2.2.1 | ggalt | 0.4.0 |
| gganimate | 1.0.9 | ggbeeswarm | 0.7.2 |
| ggbio | 1.50.0 | ggbump | 0.1.0 |
| ggcorrplot | 0.1.4.1 | ggcyto | 1.30.2 |
| ggdendro | 0.2.0 | ggdist | 3.3.2 |
| ggExtra | 0.10.1 | ggfittext | 0.10.2 |
| ggforce | 0.4.2 | ggformula | 0.12.0 |
| ggfortify | 0.4.16 | ggfun | 0.1.4 |
| gggenes | 0.5.1 | ggh4x | 0.2.8 |
| gghalves | 0.1.4 | gghighlight | 0.4.1 |
| ggimage | 0.3.3 | ggiraph | 0.8.9 |
| ggkegg | 1.0.13 | ggm | 2.5.1 |
| ggmanh | 1.6.0 | ggmcmc | 1.5.1.1 |
| ggmsa | 1.8.0 | ggnetwork | 0.5.13 |
| ggnewscale | 0.4.10 | GGPA | 1.14.0 |
| ggplot.multistats | 1.0.0 | ggplot2 | 3.5.0 |
| ggplotify | 0.1.2 | ggpmisc | 0.5.5 |
| ggpp | 0.5.6 | ggprism | 1.0.4 |
| ggpubr | 0.6.0 | ggraph | 2.2.1 |
| ggrastr | 1.0.2 | ggrepel | 0.9.5 |
| ggridges | 0.5.6 | ggsc | 1.0.2 |
| ggsci | 3.0.2 | ggseqlogo | 0.2 |
| ggside | 0.3.1 | ggsignif | 0.6.4 |
| ggspavis | 1.8.0 | ggstar | 1.0.4 |
| ggstats | 0.5.1 | ggtext | 0.1.2 |
| ggthemes | 5.1.0 | ggtree | 3.10.1 |
| ggtreeDendro | 1.4.0 | ggtreeExtra | 1.12.0 |
| ggupset | 0.3.0 | ggvenn | 0.1.10 |
| ggvis | 0.4.9 | ggwordcloud | 0.6.1 |
| gh | 1.4.0 | GIGSEA | 1.20.0 |
| girafe | 1.54.0 | GISPA | 1.26.0 |
| gistr | 0.9.0 | git2r | 0.33.0 |
| gitcreds | 0.1.2 | GLAD | 2.66.0 |
| GladiaTOX | 1.18.0 | glasso | 1.11 |
| gld | 2.6.6 | Glimma | 2.12.0 |
| glm2 | 1.2.1 | glmGamPoi | 1.14.3 |
| glmmTMB | 1.1.8 | glmnet | 4.1-8 |
| glmpca | 0.2.0 | glmSparseNet | 1.20.1 |
| GlobalAncova | 4.20.0 | GlobalOptions | 0.1.2 |
| globals | 0.16.3 | globalSeq | 1.30.0 |
| globaltest | 5.56.0 | GloScope | 1.0.0 |
| glue | 1.7.0 | gmapR | 1.44.0 |
| GmicR | 1.16.0 | gmm | 1.8 |
| gmodels | 2.19.1 | gmoviz | 1.14.0 |
| gmp | 0.7-4 | GMRP | 1.30.0 |
| GNET2 | 1.18.0 | gnm | 1.1-5 |
| GNOSIS | 1.0.0 | GO.db | 3.18.0 |
| GOexpress | 1.36.0 | GoFKernel | 2.1-1 |
| goftest | 1.2-3 | GOfuncR | 1.22.2 |
| golem | 0.4.1 | googleAuthR | 2.0.1 |
| googledrive | 2.1.1 | googlesheets4 | 1.1.1 |
| googleVis | 0.7.1 | GOpro | 1.28.0 |
| goProfiles | 1.64.0 | GOSemSim | 2.28.1 |
| goseq | 1.54.0 | GOSim | 1.40.0 |
| goSorensen | 1.4.0 | goSTAG | 1.26.0 |
| GOstats | 2.68.0 | GOsummaries | 2.37.0 |
| GOTHiC | 1.38.0 | goTools | 1.76.0 |
| gower | 1.0.1 | GPA | 1.14.0 |
| gplots | 3.1.3.1 | gpls | 1.74.0 |
| gProfileR | 0.7.0 | gprofiler2 | 0.2.3 |
| gpuMagic | 1.18.0 | gRain | 1.4.1 |
| GRaNIE | 1.6.1 | granulator | 1.10.0 |
| graper | 1.18.0 | graph | 1.80.0 |
| GraphAlignment | 1.66.0 | GraphAT | 1.74.0 |
| graphite | 1.48.0 | graphlayouts | 1.1.1 |
| GraphPAC | 1.44.0 | gRbase | 2.0.1 |
| GRENITS | 1.54.0 | GreyListChIP | 1.34.0 |
| gridBase | 0.4-7 | gridExtra | 2.3 |
| gridGraphics | 0.5-1 | gridSVG | 1.7-5 |
| gridtext | 0.1.5 | grImport | 0.9-7 |
| GRmetrics | 1.28.0 | groHMM | 1.36.0 |
| grr | 0.9.5 | GSA | 1.03.2 |
| GSALightning | 1.30.0 | GSAR | 1.36.0 |
| GSCA | 2.32.0 | gscreend | 1.16.1 |
| GSEABase | 1.64.0 | GSEABenchmarkeR | 1.22.0 |
| GSEAlm | 1.62.0 | GSEAmining | 1.12.0 |
| gsean | 1.22.0 | GSgalgoR | 1.12.0 |
| gsl | 2.1-8 | gsmoothr | 0.1.7 |
| gson | 0.1.0 | GSReg | 1.36.0 |
| GSRI | 2.50.0 | gss | 2.2-7 |
| gstat | 2.1-1 | gsubfn | 0.7 |
| GSVA | 1.50.1 | GSVAdata | 1.38.0 |
| gtable | 0.3.4 | gtools | 3.9.5 |
| gtrellis | 1.34.0 | GUIDEseq | 1.32.0 |
| Guitar | 2.18.0 | GUniFrac | 1.8 |
| Gviz | 1.46.1 | GWAS.BAYES | 1.12.0 |
| gwascat | 2.34.0 | GWASExactHW | 1.2 |
| GWASTools | 1.48.0 | gwasurvivr | 1.20.0 |
| GWENA | 1.12.0 | h5vc | 2.36.0 |
| h5vcData | 2.22.0 | hapFabia | 1.44.0 |
| hardhat | 1.3.1 | HardyWeinberg | 1.7.5 |
| Harman | 1.30.0 | harmonicmeanp | 3.0.1 |
| HarmonizR | 1.0.0 | harmony | 1.2.0 |
| Harshlight | 1.74.0 | hash | 2.2.6.3 |
| haven | 2.5.4 | hca | 1.10.0 |
| HDCI | 1.0-2 | HDF5Array | 1.30.1 |
| hdf5r | 1.3.10 | HDInterval | 0.2.4 |
| HDO.db | 0.99.1 | hdrcde | 3.4 |
| HDTD | 1.36.0 | heatmap3 | 1.1.9 |
| heatmaply | 1.5.0 | heatmaps | 1.26.0 |
| Heatplus | 3.10.0 | HelloRanges | 1.28.0 |
| HELP | 1.60.0 | HEM | 1.74.0 |
| here | 1.0.1 | hermes | 1.6.1 |
| HERON | 1.0.0 | Herper | 1.12.0 |
| hexbin | 1.28.3 | HGC | 1.10.0 |
| HGNChelper | 0.8.1 | hgu133a.db | 3.13.0 |
| hgu133a2.db | 3.13.0 | hgu133plus2.db | 3.13.0 |
| hgu95a.db | 3.13.0 | hgu95av2.db | 3.13.0 |
| HH | 3.1-52 | hiAnnotator | 1.36.0 |
| HIBAG | 1.38.2 | HiCBricks | 1.20.0 |
| HiCcompare | 1.24.0 | HiCDCPlus | 1.10.0 |
| HiCDOC | 1.4.1 | HiCExperiment | 1.2.0 |
| HiContacts | 1.4.0 | HiCool | 1.2.0 |
| hicVennDiagram | 1.0.2 | HiddenMarkov | 1.8-13 |
| hierGWAS | 1.32.0 | hierinf | 1.20.0 |
| highcharter | 0.9.4 | highr | 0.10 |
| HilbertCurve | 1.32.0 | HilbertVis | 1.60.0 |
| HilbertVisGUI | 1.60.0 | HiLDA | 1.16.0 |
| hipathia | 3.2.0 | HIPPO | 1.14.0 |
| hiReadsProcessor | 1.38.0 | HIREewas | 1.20.0 |
| HiTC | 1.46.0 | HiveR | 0.3.63 |
| hmdbQuery | 1.22.0 | Hmisc | 5.1-2 |
| HMMcopy | 1.44.0 | hms | 1.1.3 |
| Homo.sapiens | 1.3.1 | homologene | 1.4.68.19.3.27 |
| hoodscanR | 1.0.0 | hopach | 2.62.0 |
| howmany | 0.3-1 | HPAanalyze | 1.20.0 |
| hpar | 1.44.0 | HPiP | 1.8.0 |
| hrbrthemes | 0.8.7 | HSMMSingleCell | 1.22.0 |
| htm2txt | 2.2.2 | htmlTable | 2.4.2 |
| htmltools | 0.5.7 | HTMLUtils | 0.1.9 |
| htmlwidgets | 1.6.4 | HTqPCR | 1.56.0 |
| HTSCluster | 2.0.11 | HTSeqGenie | 4.32.0 |
| HTSFilter | 1.42.0 | httpcache | 1.2.0 |
| httpcode | 0.3.0 | httpuv | 1.6.14 |
| httr | 1.4.7 | httr2 | 1.0.0 |
| HubPub | 1.10.1 | huge | 1.3.5 |
| HumanTranscriptomeCompendium | 1.17.0 | hummingbird | 1.12.0 |
| hunspell | 3.0.3 | hwriter | 1.3.2.1 |
| HybridMTest | 1.46.0 | hypeR | 2.0.0 |
| hyperdraw | 1.54.0 | hypergraph | 1.74.0 |
| iASeq | 1.46.0 | iasva | 1.20.0 |
| iBBiG | 1.46.0 | ibh | 1.50.0 |
| iBMQ | 1.42.0 | iC10 | 1.5 |
| iC10TrainingData | 1.3.1 | ica | 1.0-3 |
| iCARE | 1.30.0 | Icens | 1.74.0 |
| icetea | 1.20.0 | iCheck | 1.32.0 |
| iChip | 1.56.0 | iClusterPlus | 1.38.0 |
| iCNV | 1.22.0 | iCOBRA | 1.30.0 |
| ICS | 1.4-1 | ICSNP | 1.1-2 |
| ideal | 1.26.0 | IdeoViz | 1.37.0 |
| idiogram | 1.78.0 | IDPmisc | 1.1.21 |
| idpr | 1.12.0 | idr | 1.3 |
| idr2d | 1.16.0 | ids | 1.0.1 |
| IFAA | 1.4.0 | iGC | 1.32.0 |
| IgGeneUsage | 1.16.0 | igraph | 2.0.3 |
| igvR | 1.22.0 | IHW | 1.30.0 |
| Illumina450ProbeVariants.db | 1.38.0 | IlluminaHumanMethylation450kanno.ilmn12.hg19 | 0.6.1 |
| IlluminaHumanMethylation450kmanifest | 0.4.0 | IlluminaHumanMethylationEPICanno.ilm10b2.hg19 | 0.6.0 |
| IlluminaHumanMethylationEPICanno.ilm10b4.hg19 | 0.6.0 | IlluminaHumanMethylationEPICmanifest | 0.3.0 |
| illuminaio | 0.44.0 | ILoReg | 1.12.1 |
| imager | 0.45.8 | IMAS | 1.26.0 |
| imcRtools | 1.8.0 | IMMAN | 1.22.0 |
| ImmuneSpaceR | 1.30.0 | immunoClust | 1.34.0 |
| immunotation | 1.10.0 | imp4p | 1.2 |
| IMPCdata | 1.38.0 | import | 1.3.2 |
| impute | 1.76.0 | imputeLCMD | 2.1 |
| inaparc | 1.2.0 | INDEED | 2.16.0 |
| ineq | 0.2-13 | iNETgrate | 1.0.0 |
| infercnv | 1.18.1 | infinityFlow | 1.12.0 |
| Informeasure | 1.12.1 | infotheo | 1.2.0.1 |
| ini | 0.3.1 | inline | 0.3.19 |
| InPAS | 2.10.0 | INPower | 1.38.0 |
| insight | 0.19.9 | INSPEcT | 1.32.1 |
| INTACT | 1.2.0 | InTAD | 1.22.0 |
| intansv | 1.42.0 | interacCircos | 1.12.0 |
| InteractionSet | 1.30.0 | InteractiveComplexHeatmap | 1.10.0 |
| interactiveDisplay | 1.40.0 | interactiveDisplayBase | 1.40.0 |
| InterCellar | 2.8.0 | IntEREst | 1.26.0 |
| intergraph | 2.0-4 | InterMineR | 1.24.0 |
| interp | 1.1-6 | intervals | 0.15.4 |
| IntOMICS | 1.2.0 | IntramiRExploreR | 1.24.0 |
| intrinsicDimension | 1.2.0 | inum | 1.0-5 |
| InvariantCausalPrediction | 0.8 | invgamma | 1.1 |
| IONiseR | 2.26.0 | iPAC | 1.46.0 |
| iPath | 1.8.0 | ipdDb | 1.20.0 |
| IPO | 1.28.0 | ipred | 0.9-14 |
| IRanges | 2.36.0 | IRdisplay | 1.1 |
| IRkernel | 1.3.2 | irlba | 2.3.5.1 |
| irr | 0.84.1 | isa2 | 0.3.6 |
| ISAnalytics | 1.12.0 | iSEE | 2.14.0 |
| iSEEde | 1.0.0 | iSEEhex | 1.4.0 |
| iSEEhub | 1.4.0 | iSEEindex | 1.0.0 |
| iSEEpathways | 1.0.0 | iSEEu | 1.14.0 |
| iSeq | 1.54.0 | ISLET | 1.4.0 |
| Iso | 0.0-21 | isoband | 0.2.7 |
| isobar | 1.48.0 | IsoBayes | 1.0.1 |
| ISOcodes | 2024.02.12 | IsoCorrectoR | 1.20.0 |
| IsoCorrectoRGUI | 1.18.0 | IsoformSwitchAnalyzeR | 2.2.0 |
| ISoLDE | 1.30.0 | isomiRs | 1.30.0 |
| isotree | 0.5.24-3 | isva | 1.9 |
| ITALICS | 2.62.0 | ITALICSData | 2.40.0 |
| iterativeBMA | 1.60.0 | iterativeBMAsurv | 1.60.0 |
| iterators | 1.0.14 | iterClust | 1.24.0 |
| itertools | 0.1-3 | IVAS | 2.22.0 |
| ivygapSE | 1.24.0 | IWTomics | 1.26.0 |
| JADE | 2.0-4 | janeaustenr | 1.0.0 |
| janitor | 2.2.0 | JASPAR2016 | 1.30.0 |
| JASPAR2018 | 1.1.1 | jomo | 2.7-6 |
| jpeg | 0.1-10 | jquerylib | 0.1.4 |
| jsonlite | 1.8.8 | jsonvalidate | 1.3.2 |
| kableExtra | 1.4.0 | karyoploteR | 1.28.0 |
| katdetectr | 1.4.0 | KBoost | 1.10.0 |
| KCsmart | 2.60.0 | kde1d | 1.0.7 |
| kebabs | 1.36.0 | KEGGandMetacoreDzPathwaysGEO | 1.22.0 |
| KEGGdzPathwaysGEO | 1.40.0 | KEGGgraph | 1.62.0 |
| KEGGlincs | 1.28.0 | keggorthology | 2.54.0 |
| KEGGREST | 1.42.0 | Kendall | 2.2.1 |
| keras | 2.13.0 | kernlab | 0.9-32 |
| kinship2 | 1.9.6 | KinSwingR | 1.20.0 |
| kissDE | 1.22.0 | kknn | 1.3.1 |
| klaR | 1.7-3 | km.ci | 0.5-6 |
| kmer | 1.1.2 | KMsurv | 0.1-5 |
| knitr | 1.45 | knitrBootstrap | 1.0.3 |
| knn.covertree | 1.0 | KnowSeq | 1.16.0 |
| KOdata | 1.28.0 | kohonen | 3.0.12 |
| koRpus | 0.13-8 | koRpus.lang.en | 0.1-4 |
| kpeaks | 1.1.0 | kpmt | 0.1.0 |
| kriging | 1.2 | ks | 1.14.2 |
| kSamples | 1.2-10 | labeling | 0.4.3 |
| labelled | 2.12.0 | LACE | 2.6.1 |
| laeken | 0.5.3 | lambda.r | 1.2.4 |
| LambertW | 0.6.9-1 | lamW | 2.2.3 |
| LaplacesDemon | 16.1.6 | lapmix | 1.68.0 |
| lars | 1.3 | later | 1.3.2 |
| latex2exp | 0.9.6 | latticeExtra | 0.6-30 |
| lava | 1.8.0 | lavaan | 0.6-17 |
| lazyeval | 0.2.2 | LBE | 1.70.0 |
| lbfgs | 1.2.1.2 | ldblock | 1.32.0 |
| LEA | 3.14.0 | leaps | 3.1 |
| learnr | 0.11.5 | LedPred | 1.36.0 |
| lefser | 1.12.1 | leiden | 0.4.3.1 |
| leidenbase | 0.1.27 | lemur | 1.0.5 |
| les | 1.52.0 | levi | 1.20.0 |
| lexicon | 1.2.1 | lfa | 2.2.0 |
| lfda | 1.1.3 | lgr | 0.4.4 |
| lhs | 1.1.6 | libcoin | 1.0-10 |
| LiblineaR | 2.10-23 | lifecycle | 1.0.4 |
| liger | 2.0.1 | LIM | 1.4.7.1 |
| limma | 3.58.1 | limmaGUI | 1.78.0 |
| limSolve | 1.5.7.1 | LineagePulse | 1.21.0 |
| lineagespot | 1.6.0 | linkcomm | 1.0-14 |
| LinkHD | 1.16.0 | Linnorm | 2.26.0 |
| linprog | 0.9-4 | LinTInd | 1.6.0 |
| lintr | 3.1.1 | lionessR | 1.16.0 |
| lipidr | 2.16.0 | LiquidAssociation | 1.56.0 |
| lisaClust | 1.10.1 | listenv | 0.9.1 |
| lmdme | 1.44.0 | lme4 | 1.1-35.1 |
| lmerTest | 3.1-3 | lmodel2 | 1.7-3 |
| lmom | 3.0 | Lmoments | 1.3-1 |
| lmtest | 0.9-40 | LOBSTAHS | 1.28.0 |
| lobstr | 1.1.2 | locfdr | 1.1-8 |
| locfit | 1.5-9.9 | loci2path | 1.22.0 |
| log4r | 0.4.3 | logger | 0.3.0 |
| logging | 0.10-108 | logicFS | 2.22.0 |
| LogicReg | 1.6.6 | logistf | 1.26.0 |
| logitnorm | 0.8.39 | logNormReg | 0.5-0 |
| logr | 1.3.6 | logspline | 2.1.21 |
| lokern | 1.1-10.1 | LOLA | 1.32.0 |
| longitudinal | 1.1.13 | loo | 2.7.0 |
| LoomExperiment | 1.20.0 | LPE | 1.76.0 |
| LPEadj | 1.62.0 | lpNet | 2.34.2 |
| lpSolve | 5.6.20 | lpSolveAPI | 5.5.2.0-17.11 |
| lpsymphony | 1.30.0 | LRBaseDbi | 2.12.1 |
| LRcell | 1.10.0 | lsa | 0.73.3 |
| LSD | 4.1-0 | lsr | 0.5.2 |
| lubridate | 1.9.3 | lumi | 2.54.0 |
| lumiHumanAll.db | 1.22.0 | LungCancerACvsSCCGEO | 1.38.0 |
| lwgeom | 0.2-14 | LymphoSeq | 1.30.0 |
| LymphoSeqDB | 0.99.2 | M3C | 1.24.0 |
| M3Drop | 1.28.0 | m6Aboost | 1.8.0 |
| Maaslin2 | 1.16.0 | Macarron | 1.6.0 |
| macat | 1.76.0 | maCorrPlot | 1.72.0 |
| MACSQuantifyR | 1.16.0 | MACSr | 1.10.0 |
| made4 | 1.76.0 | MADSEQ | 1.28.0 |
| MafDb.1Kgenomes.phase3.hs37d5 | 3.10.0 | MafDb.ExAC.r1.0.hs37d5 | 3.10.0 |
| MafDb.gnomADex.r2.1.hs37d5 | 3.10.0 | maftools | 2.18.0 |
| MAGAR | 1.10.0 | MAGeCKFlute | 2.6.0 |
| magic | 1.6-1 | magicaxis | 2.4.5 |
| magick | 2.8.3 | magpie | 1.2.0 |
| magrene | 1.4.0 | magrittr | 2.0.3 |
| MAI | 1.8.0 | MAIT | 1.36.0 |
| makecdfenv | 1.78.0 | MALDIquant | 1.22.2 |
| MANOR | 1.74.0 | MantelCorr | 1.72.0 |
| mapplots | 1.5.2 | mapproj | 1.2.11 |
| maPredictDSC | 1.40.0 | maps | 3.4.2 |
| mapscape | 1.26.0 | maptree | 1.4-8 |
| mariner | 1.2.0 | markdown | 1.12 |
| marr | 1.12.0 | marray | 1.80.0 |
| martini | 1.22.0 | maser | 1.20.0 |
| mashr | 0.2.79 | maSigPro | 1.74.0 |
| maskBAD | 1.46.0 | MassArray | 1.54.0 |
| massiR | 1.38.0 | MassSpecWavelet | 1.68.0 |
| MAST | 1.28.0 | mastR | 1.2.3 |
| matchBox | 1.44.0 | matchingR | 1.3.3 |
| mathjaxr | 1.6-0 | matlab | 1.0.4 |
| matrixcalc | 1.0-6 | MatrixEQTL | 2.3 |
| MatrixExtra | 0.1.15 | MatrixGenerics | 1.14.0 |
| MatrixModels | 0.5-3 | MatrixQCvis | 1.10.0 |
| MatrixRider | 1.34.0 | matrixStats | 1.2.0 |
| matrixTests | 0.2.3 | matter | 2.4.1 |
| maxLik | 1.5-2 | maxstat | 0.7-25 |
| MBA | 0.1-0 | MBAmethyl | 1.36.0 |
| MBASED | 1.36.0 | MBCB | 1.56.0 |
| MBECS | 1.6.0 | mbest | 0.6 |
| mbkmeans | 1.18.0 | mboost | 2.9-9 |
| mBPCR | 1.56.0 | MBQN | 2.14.0 |
| mbQTL | 1.2.0 | MBttest | 1.30.0 |
| MCbiclust | 1.26.0 | mcbiopi | 1.1.6 |
| MCL | 1.0 | mclust | 6.1 |
| mclustcomp | 0.3.3 | mcmc | 0.9-8 |
| MCMCglmm | 2.35 | MCMCpack | 1.7-0 |
| MCMCprecision | 0.4.0 | mco | 1.16 |
| mCSEA | 1.22.0 | mCSEAdata | 1.22.0 |
| mdp | 1.22.0 | mdqc | 1.64.0 |
| MDTS | 1.22.0 | MEAL | 1.32.0 |
| MeasurementError.cor | 1.74.0 | MEAT | 1.14.0 |
| MEB | 1.16.0 | MEDIPS | 1.54.0 |
| MEDME | 1.62.0 | mefa | 3.2-8 |
| megadepth | 1.12.0 | MEIGOR | 1.36.1 |
| Melissa | 1.18.0 | memes | 1.10.0 |
| memoise | 2.0.1 | memuse | 4.2-3 |
| Mergeomics | 1.30.0 | MeSHDbi | 1.38.0 |
| meshes | 1.28.0 | meshr | 2.8.0 |
| MesKit | 1.12.0 | MESS | 0.5.12 |
| messina | 1.38.0 | metabCombiner | 1.12.0 |
| metabinR | 1.4.0 | MetaboAnnotation | 1.6.1 |
| MetaboCoreUtils | 1.10.0 | metaboliteIDmapping | 1.0.0 |
| metabolomicsWorkbenchR | 1.12.0 | metabomxtr | 1.36.0 |
| MetaboSignal | 1.32.1 | metaCCA | 1.30.0 |
| MetaCycle | 1.2.0 | MetaCyto | 1.24.0 |
| metadat | 1.2-0 | metafor | 4.4-0 |
| metagene2 | 1.18.0 | metagenomeSeq | 1.43.0 |
| metahdep | 1.60.0 | metaMA | 3.1.3 |
| metaMS | 1.38.0 | MetaNeighbor | 1.22.0 |
| metap | 1.9 | MetaPhOR | 1.4.0 |
| metapod | 1.10.1 | metapone | 1.8.0 |
| metaSeq | 1.42.0 | metaseqR2 | 1.14.0 |
| MetBrewer | 0.2.0 | MetCirc | 1.32.0 |
| methimpute | 1.24.0 | methInheritSim | 1.24.0 |
| MethPed | 1.30.0 | MethReg | 1.12.0 |
| methrix | 1.16.0 | MethTargetedNGS | 1.34.0 |
| MethylAid | 1.36.0 | methylCC | 1.16.0 |
| methylclock | 1.8.0 | methylclockData | 1.10.0 |
| methylGSA | 1.20.0 | methylInheritance | 1.26.0 |
| methylKit | 1.28.0 | MethylMix | 2.32.0 |
| methylMnM | 1.40.0 | methylPipe | 1.36.0 |
| methylscaper | 1.10.0 | MethylSeekR | 1.42.0 |
| methylSig | 1.14.0 | methylumi | 2.48.0 |
| MetID | 1.20.0 | MetNet | 1.20.0 |
| metR | 0.15.0 | mfa | 1.24.0 |
| Mfuzz | 2.62.0 | MGFM | 1.36.0 |
| MGFR | 1.28.0 | MGLM | 0.2.1 |
| mgsa | 1.50.0 | mgsub | 1.7.3 |
| mhsmm | 0.4.21 | mia | 1.10.0 |
| miaSim | 1.8.0 | miaViz | 1.10.0 |
| mice | 3.16.0 | MiChip | 1.56.0 |
| microbenchmark | 1.4.10 | microbiome | 1.24.0 |
| microbiomeDASim | 1.16.0 | microbiomeExplorer | 1.12.0 |
| microbiomeMarker | 1.8.0 | MicrobiomeProfiler | 1.8.0 |
| MicrobiomeStat | 1.1 | MicrobiotaProcess | 1.14.0 |
| microRNA | 1.60.0 | microSTASIS | 1.2.0 |
| MICSQTL | 1.0.0 | midasHLA | 1.10.0 |
| miloR | 1.10.0 | mimager | 1.26.0 |
| mime | 0.12 | mina | 1.10.0 |
| MineICA | 1.42.0 | minet | 3.60.0 |
| minfi | 1.48.0 | MinimumDistance | 1.46.0 |
| miniUI | 0.1.1.1 | minpack.lm | 1.2-4 |
| minqa | 1.2.6 | MiPP | 1.74.0 |
| miQC | 1.10.0 | MIRA | 1.24.0 |
| MiRaGE | 1.44.0 | mirbase.db | 1.2.0 |
| miRBaseVersions.db | 1.1.0 | miRcomp | 1.32.0 |
| miRcompData | 1.32.0 | mirIntegrator | 1.32.0 |
| miRLAB | 1.32.0 | miRNAmeConverter | 1.30.0 |
| miRNApath | 1.62.0 | miRNAtap | 1.36.0 |
| miRNAtap.db | 0.99.10 | mirTarRnaSeq | 1.10.0 |
| misc3d | 0.9-1 | miscTools | 0.6-28 |
| missForest | 1.5 | missMDA | 1.19 |
| missMethyl | 1.36.0 | missRows | 1.22.0 |
| mistyR | 1.10.0 | mitch | 1.14.0 |
| mitml | 0.4-5 | mitoClone2 | 1.8.1 |
| mitools | 2.4 | mixOmics | 6.26.0 |
| mixsmsn | 1.1-10 | mixsqp | 0.3-54 |
| mixtools | 2.0.0 | MKmisc | 1.9 |
| mlapi | 0.1.1 | mlbench | 2.1-3.1 |
| MLInterfaces | 1.82.0 | MLmetrics | 1.1.1 |
| MLP | 1.50.0 | mlr3 | 0.18.0 |
| mlr3learners | 0.6.0 | mlr3measures | 0.5.0 |
| mlr3misc | 0.14.0 | mlr3tuning | 0.20.0 |
| MLSeq | 2.20.0 | mltools | 0.3.5 |
| mmand | 1.6.3 | MMDiff2 | 1.30.0 |
| MMUPHin | 1.16.0 | mnem | 1.18.0 |
| mnormt | 2.1.1 | moanin | 1.10.0 |
| MobilityTransformR | 1.6.0 | mockery | 0.4.4 |
| MODA | 1.28.0 | ModCon | 1.10.0 |
| modeest | 2.4.0 | ModelMetrics | 1.2.2.2 |
| modelr | 0.1.11 | modeltools | 0.2-23 |
| Modstrings | 1.18.0 | MOFA2 | 1.12.1 |
| MOFAdata | 1.18.0 | MOGAMUN | 1.12.0 |
| mogsa | 1.36.0 | MoleculeExperiment | 1.2.2 |
| MOMA | 1.14.0 | moments | 0.14.1 |
| monaLisa | 1.8.0 | monocle | 2.30.0 |
| Moonlight2R | 1.0.0 | MoonlightR | 1.28.0 |
| mosaicCore | 0.9.4.0 | mosaics | 2.40.0 |
| mosbi | 1.8.0 | MOSim | 1.16.0 |
| Motif2Site | 1.6.0 | motifbreakR | 2.16.0 |
| motifcounter | 1.26.0 | MotifDb | 1.44.0 |
| motifmatchr | 1.24.0 | motifStack | 1.46.0 |
| MouseFM | 1.12.0 | MPFE | 1.38.0 |
| mpm | 1.0-23 | mpra | 1.24.0 |
| MPRAnalyze | 1.20.0 | MQmetrics | 1.10.0 |
| mrfDepth | 1.0.16 | mRMRe | 2.1.2.1 |
| msa | 1.34.0 | MSA2dist | 1.6.0 |
| MsBackendMassbank | 1.10.1 | MsBackendMgf | 1.10.0 |
| MsBackendMsp | 1.6.0 | MsBackendRawFileReader | 1.8.1 |
| MsBackendSql | 1.2.0 | MsCoreUtils | 1.14.1 |
| msdata | 0.42.0 | MsDataHub | 1.2.0 |
| MsExperiment | 1.4.0 | MsFeatures | 1.10.0 |
| msgbsR | 1.26.0 | msgps | 1.3.5 |
| msigdb | 1.10.0 | msigdbr | 7.5.1 |
| msImpute | 1.12.0 | mslp | 1.4.0 |
| msm | 1.7.1 | msmsEDA | 1.40.0 |
| msmsTests | 1.40.0 | MSnbase | 2.28.1 |
| MSnID | 1.36.0 | MSPrep | 1.12.0 |
| msPurity | 1.28.0 | MSQC | 1.1.0 |
| msqrob2 | 1.10.0 | MsQuality | 1.2.1 |
| MSstats | 4.10.1 | MSstatsBig | 1.0.0 |
| MSstatsConvert | 1.12.1 | MSstatsLiP | 1.8.1 |
| MSstatsLOBD | 1.10.0 | MSstatsPTM | 2.4.4 |
| MSstatsQC | 2.20.0 | MSstatsQCgui | 1.22.0 |
| MSstatsShiny | 1.4.3 | MSstatsTMT | 2.10.0 |
| MuData | 1.6.0 | Mulcom | 1.52.0 |
| multcomp | 1.4-25 | multcompView | 0.1-10 |
| MultiAssayExperiment | 1.28.0 | MultiBaC | 1.12.0 |
| multiClust | 1.32.0 | multicool | 1.0.1 |
| MultiDataSet | 1.30.0 | multiGSEA | 1.12.0 |
| multiHiCcompare | 1.20.0 | MultiMed | 2.24.0 |
| multiMiR | 1.24.0 | MultimodalExperiment | 1.2.0 |
| MultiRNAflow | 1.0.0 | multiscan | 1.62.0 |
| multiWGCNA | 1.0.0 | multtest | 2.58.0 |
| mumosa | 1.10.0 | MungeSumstats | 1.10.1 |
| munsell | 0.5.0 | Mus.musculus | 1.3.1 |
| muscat | 1.16.0 | muscle | 3.44.0 |
| musicatk | 1.12.0 | MutationalPatterns | 3.12.0 |
| mutoss | 0.1-13 | MVCClass | 1.76.0 |
| mvnfast | 0.2.8 | mvoutlier | 2.1.1 |
| mvtnorm | 1.2-4 | MWASTools | 1.26.0 |
| mwcsr | 0.1.8 | mygene | 1.38.0 |
| myvariant | 1.32.0 | mzID | 1.40.0 |
| mzR | 2.36.0 | nabor | 0.5.0 |
| NADA | 1.6-1.1 | NADfinder | 1.26.0 |
| naivebayes | 1.0.0 | naniar | 1.1.0 |
| NanoMethViz | 2.8.1 | NanoStringDiff | 1.32.0 |
| NanoStringNCTools | 1.10.0 | nanotatoR | 1.18.0 |
| nanotime | 0.3.7 | NanoTube | 1.8.0 |
| naturalsort | 0.1.3 | NBAMSeq | 1.18.0 |
| NbClust | 3.0.1 | NBPSeq | 0.3.1 |
| ncdf4 | 1.22 | ncdfFlow | 2.48.0 |
| ncGTW | 1.16.0 | NCIgraph | 1.50.0 |
| NCmisc | 1.2.0 | ncRNAtools | 1.12.0 |
| ndexr | 1.24.0 | nearBynding | 1.12.0 |
| Nebulosa | 1.12.1 | nempi | 1.10.0 |
| neo4r | 0.1.1 | NetActivity | 1.4.0 |
| NetActivityData | 1.4.0 | netbiov | 1.36.0 |
| netboost | 2.10.0 | netDx | 1.14.0 |
| nethet | 1.34.0 | netOmics | 1.8.0 |
| NetPathMiner | 1.38.0 | netprioR | 1.28.0 |
| NetRep | 1.2.7 | netresponse | 1.62.0 |
| NetSAM | 1.42.0 | netSmooth | 1.22.0 |
| network | 1.18.2 | networkD3 | 0.4 |
| netZooR | 1.6.0 | NeuCA | 1.8.1 |
| NewWave | 1.12.0 | NGLVieweR | 1.3.1 |
| ngsReports | 2.4.0 | NHPoisson | 3.3 |
| nipalsMCIA | 1.0.0 | NISTunits | 1.0.1 |
| nleqslv | 3.3.5 | nloptr | 2.0.3 |
| NLP | 0.2-1 | nls2 | 0.3-3 |
| NMF | 0.27 | NMI | 2.0 |
| nnlasso | 0.3 | nnls | 1.5 |
| nnNorm | 2.66.0 | nnSVG | 1.6.3 |
| nnTensor | 1.2.0 | NOISeq | 2.46.0 |
| nondetects | 2.32.0 | nor1mix | 1.3-2 |
| NoRCE | 1.14.0 | norm | 1.0-11.1 |
| normalize450K | 1.30.0 | NormalyzerDE | 1.20.0 |
| NormqPCR | 1.48.0 | normr | 1.28.0 |
| nortest | 1.0-4 | Nozzle.R1 | 1.1-1.1 |
| np | 0.60-17 | NPARC | 1.14.0 |
| npGSEA | 1.38.0 | nsga2R | 1.1 |
| NTW | 1.52.0 | nucleoSim | 1.30.0 |
| nucleR | 2.34.0 | nuCpos | 1.20.0 |
| nullranges | 1.8.0 | numbers | 0.8-5 |
| numDeriv | 2016.8-1.1 | NuPoP | 2.10.0 |
| NxtIRFdata | 1.8.0 | oaqc | 1.0 |
| objectProperties | 0.6.8 | objectSignals | 0.10.3 |
| occugene | 1.62.0 | OCplus | 1.76.0 |
| octad | 1.4.0 | octad.db | 1.4.0 |
| odseq | 1.30.0 | officer | 0.6.5 |
| OGRE | 1.6.0 | oligo | 1.66.0 |
| oligoClasses | 1.64.0 | OLIN | 1.80.0 |
| OLINgui | 1.76.0 | omada | 1.4.0 |
| OmaDB | 2.18.0 | omicade4 | 1.42.0 |
| OmicCircos | 1.40.0 | omicplotR | 1.22.0 |
| omicRexposome | 1.24.3 | OMICsPCA | 1.20.0 |
| OMICsPCAdata | 1.20.0 | omicsPrint | 1.22.0 |
| omicsViewer | 1.6.0 | Omixer | 1.12.0 |
| OmnipathR | 3.10.1 | ompBAM | 1.6.0 |
| oncomix | 1.24.0 | oncoscanR | 1.4.0 |
| OncoScore | 1.30.0 | OncoSimulR | 4.4.0 |
| onlineFDR | 2.10.0 | ontologyIndex | 2.12 |
| ontologyPlot | 1.7 | ontoProc | 1.24.0 |
| openair | 2.18-2 | opencpu | 2.2.11 |
| openCyto | 2.14.0 | openPrimeR | 1.24.0 |
| openPrimeRui | 1.24.0 | openssl | 2.1.1 |
| OpenStats | 1.14.0 | openxlsx | 4.2.5.2 |
| operator.tools | 1.6.3 | oposSOM | 2.20.0 |
| oppar | 1.30.0 | oppti | 1.16.0 |
| optimalFlow | 1.14.0 | optimalFlowData | 1.14.0 |
| optimx | 2023-10.21 | optparse | 1.7.4 |
| OPWeight | 1.24.0 | OrderedList | 1.74.0 |
| ordinal | 2023.12-4 | ore | 1.7.4.1 |
| ORFhunteR | 1.10.0 | ORFik | 1.22.2 |
| org.Bt.eg.db | 3.18.0 | org.Ce.eg.db | 3.18.0 |
| org.Dm.eg.db | 3.18.0 | org.Dr.eg.db | 3.18.0 |
| org.Hs.eg.db | 3.18.0 | org.Mm.eg.db | 3.18.0 |
| org.Rn.eg.db | 3.18.0 | org.Sc.sgd.db | 3.18.0 |
| Organism.dplyr | 1.30.1 | OrganismDbi | 1.44.0 |
| OrgMassSpecR | 0.5-3 | origami | 1.0.7 |
| orthogene | 1.8.0 | orthos | 1.0.1 |
| orthosData | 1.0.0 | OSAT | 1.50.0 |
| Oscope | 1.32.0 | osfr | 0.2.9 |
| osqp | 0.6.3.2 | OTUbase | 1.52.0 |
| outliers | 0.15 | OUTRIDER | 1.20.0 |
| OutSplice | 1.2.0 | OVESEG | 1.18.0 |
| PAA | 1.36.0 | packFinder | 1.14.0 |
| padma | 1.12.0 | PADOG | 1.44.0 |
| pageRank | 1.12.0 | paintmap | 1.0 |
| PAIRADISE | 1.18.0 | paircompviz | 1.40.0 |
| PairedData | 1.1.1 | pairedGSEA | 1.2.0 |
| pairkat | 1.8.0 | pairsD3 | 0.1.3 |
| palmerpenguins | 0.1.1 | pals | 1.8 |
| pamr | 1.56.1 | pan | 1.9 |
| pandaR | 1.34.0 | pander | 0.6.5 |
| panelcn.mops | 1.24.0 | PanomiR | 1.6.0 |
| panp | 1.72.0 | PANR | 1.48.0 |
| PanViz | 1.4.0 | paradox | 0.11.1 |
| parallelDist | 0.2.6 | ParallelLogger | 3.3.0 |
| parallelly | 1.37.1 | pareg | 1.6.0 |
| parglms | 1.34.0 | parmigene | 1.1.0 |
| parody | 1.60.0 | partCNV | 1.0.0 |
| partykit | 1.2-20 | pasilla | 1.30.0 |
| PAST | 1.18.0 | pastecs | 1.4.2 |
| patchwork | 1.2.0 | Path2PPI | 1.32.0 |
| pathifier | 1.40.0 | PathNet | 1.42.0 |
| PathoStat | 1.28.0 | pathRender | 1.70.0 |
| pathview | 1.42.0 | pathwayPCA | 1.18.0 |
| paws.common | 0.7.1 | paws.storage | 0.5.0 |
| paxtoolsr | 1.36.0 | pbapply | 1.7-2 |
| pbdZMQ | 0.3-11 | pbivnorm | 0.6.0 |
| pbkrtest | 0.5.2 | pbmcapply | 1.5.1 |
| pcaExplorer | 2.28.0 | pcalg | 2.7-11 |
| pcaMethods | 1.94.0 | PCAN | 1.30.0 |
| pcaPP | 2.0-4 | PCAtools | 2.14.0 |
| pcxn | 2.24.0 | pcxnData | 2.24.0 |
| pd.mapping50k.xba240 | 3.12.0 | PDATK | 1.10.0 |
| pdfCluster | 1.0-4 | pdftools | 3.4.0 |
| pdInfoBuilder | 1.66.0 | pdist | 1.2.1 |
| PeacoQC | 1.12.0 | peakPantheR | 1.16.1 |
| PECA | 1.38.0 | peco | 1.14.0 |
| penalized | 0.9-52 | pengls | 1.8.0 |
| PepsNMR | 1.20.0 | pepStat | 1.36.0 |
| Peptides | 2.4.6 | pepXMLTab | 1.36.0 |
| PerformanceAnalytics | 2.0.4 | periodicDNA | 1.12.0 |
| permute | 0.9-7 | PFAM.db | 3.18.0 |
| pfamAnalyzeR | 1.2.0 | pgca | 1.26.0 |
| phangorn | 2.11.1 | phantasus | 1.22.2 |
| phantasusLite | 1.0.0 | PharmacoGx | 3.6.0 |
| phastCons100way.UCSC.hg19 | 3.7.2 | phastCons100way.UCSC.hg38 | 3.7.1 |
| phateR | 1.0.7 | pheatmap | 1.0.12 |
| phemd | 1.18.0 | PhenoGeneRanker | 1.10.0 |
| phenomis | 1.4.0 | phenopath | 1.26.0 |
| phenoTest | 1.50.0 | PhenStat | 2.38.0 |
| philentropy | 0.8.0 | philr | 1.28.0 |
| PhIPData | 1.10.0 | phosphonormalizer | 1.26.0 |
| phosphoricons | 0.2.0 | PhosR | 1.12.0 |
| phyclust | 0.1-34 | phylobase | 0.8.12 |
| phylogram | 2.1.0 | phylolm | 2.6.2 |
| PhyloProfile | 1.16.3 | phyloseq | 1.46.0 |
| Pi | 2.14.0 | piano | 2.18.0 |
| pickgene | 1.74.0 | PICS | 2.46.0 |
| Pigengene | 1.28.0 | pillar | 1.9.0 |
| pinfsc50 | 1.3.0 | PING | 2.46.0 |
| pingr | 2.0.3 | pipeComp | 1.12.0 |
| pipeFrame | 1.18.0 | pixmap | 0.4-12 |
| pkgbuild | 1.4.4 | pkgconfig | 2.0.3 |
| pkgdown | 2.0.7 | pkgload | 1.3.4 |
| planet | 1.10.0 | planttfhunter | 1.2.0 |
| plasmut | 1.0.0 | plgem | 1.74.0 |
| plier | 1.72.0 | PloGO2 | 1.14.0 |
| plogr | 0.2.0 | plot3D | 1.4.1 |
| plot3Drgl | 1.0.4 | plotgardener | 1.8.2 |
| plotGrouper | 1.20.0 | plotly | 4.10.4 |
| plotmo | 3.6.3 | plotrix | 3.8-4 |
| plotROC | 2.3.1 | PLPE | 1.62.0 |
| pls | 2.8-3 | plsgenomics | 1.5-2.1 |
| plsVarSel | 0.9.10 | plyinteractions | 1.0.0 |
| plyr | 1.8.9 | plyranges | 1.22.0 |
| PMA | 1.2-3 | PMCMRplus | 1.9.10 |
| pmm | 1.34.0 | pmp | 1.14.1 |
| png | 0.1-8 | PoDCall | 1.10.1 |
| podkat | 1.34.0 | pogos | 1.22.0 |
| poibin | 1.5 | PoiClaClu | 1.0.2.1 |
| polspline | 1.1.24 | Polychrome | 1.5.1 |
| polyclip | 1.10-6 | polyester | 1.38.0 |
| polylabelr | 0.2.0 | polynom | 1.4-1 |
| PolynomF | 2.0-8 | PolyPhen.Hsapiens.dbSNP131 | 1.0.2 |
| POMA | 1.12.0 | poorman | 0.2.7 |
| posterior | 1.5.0 | poweRlaw | 0.80.0 |
| powerTCR | 1.22.0 | POWSC | 1.10.0 |
| ppclust | 1.1.0.1 | ppcor | 1.1 |
| ppcseq | 1.10.0 | PPInfer | 1.28.0 |
| pqsfinder | 2.18.0 | prabclus | 2.3-3 |
| pracma | 2.4.4 | praise | 1.0.0 |
| pram | 1.18.0 | praznik | 11.0.0 |
| prebs | 1.42.0 | preciseTAD | 1.12.0 |
| precrec | 0.14.4 | PREDA | 1.48.0 |
| preprocessCore | 1.64.0 | preseqR | 4.0.0 |
| prettydoc | 0.4.1 | prettyunits | 1.2.0 |
| primirTSS | 1.20.0 | PRIMME | 3.2-6 |
| PrInCE | 1.18.0 | princurve | 2.1.6 |
| proActiv | 1.12.0 | proBAMr | 1.36.0 |
| pROC | 1.18.5 | PROcess | 1.78.0 |
| processx | 3.8.4 | procoil | 2.30.0 |
| proDA | 1.16.0 | prodlim | 2023.08.28 |
| profileModel | 0.6.1 | profileplyr | 1.18.0 |
| profileScoreDist | 1.30.0 | profmem | 0.6.0 |
| profvis | 0.3.8 | progeny | 1.24.0 |
| progress | 1.2.3 | progressr | 0.14.0 |
| proj4 | 1.0-14 | projectR | 1.18.0 |
| pRoloc | 1.42.0 | pRolocdata | 1.40.0 |
| pRolocGUI | 2.12.0 | PROMISE | 1.54.0 |
| promises | 1.2.1 | PROPER | 1.34.0 |
| PROPS | 1.24.0 | Prostar | 1.34.6 |
| proteinProfiles | 1.42.0 | ProteoDisco | 1.8.0 |
| ProteoMM | 1.20.0 | protGear | 1.6.0 |
| ProtGenerics | 1.34.0 | proto | 1.0.0 |
| protolite | 2.3.0 | protr | 1.7-0 |
| protViz | 0.7.9 | proxy | 0.4-27 |
| proxyC | 0.3.4 | PRROC | 1.3.1 |
| pryr | 0.1.6 | ps | 1.7.6 |
| PSCBS | 0.67.0 | pscl | 1.5.9 |
| PSEA | 1.36.0 | psichomics | 1.28.1 |
| PSMatch | 1.6.0 | pspline | 1.0-19 |
| psych | 2.4.1 | psygenet2r | 1.34.1 |
| ptairMS | 1.10.0 | ptw | 1.9-16 |
| puma | 3.44.0 | PureCN | 2.8.1 |
| purrr | 1.0.2 | pvac | 1.50.0 |
| pvca | 1.42.0 | pvclust | 2.2-0 |
| Pviz | 1.36.0 | PWMEnrich | 4.38.0 |
| pwOmics | 1.34.0 | pwr | 1.3-0 |
| qap | 0.1-2 | qckitfastq | 1.18.0 |
| qcmetrics | 1.40.1 | qdapRegex | 0.7.8 |
| qdapTools | 1.3.7 | QDNAseq | 1.38.0 |
| QFeatures | 1.12.0 | qgraph | 1.9.8 |
| qlcMatrix | 0.9.7 | qmtools | 1.6.0 |
| qpcR | 1.4-1 | qpcrNorm | 1.60.0 |
| qpdf | 1.3.2 | qpgraph | 2.36.0 |
| qPLEXanalyzer | 1.20.0 | qqconf | 1.3.2 |
| qqman | 0.1.9 | qs | 0.26.1 |
| qsea | 1.28.0 | qsmooth | 1.18.0 |
| QSutils | 1.20.0 | qsvaR | 1.6.0 |
| qtl | 1.66 | QTLExperiment | 1.0.0 |
| Qtlizer | 1.16.0 | quadprog | 1.5-8 |
| qualV | 0.3-5 | quanteda | 3.3.1 |
| quantiseqr | 1.10.0 | quantmod | 0.4.26 |
| quantreg | 5.97 | quantro | 1.36.0 |
| quantsmooth | 1.68.0 | quarto | 1.4 |
| QuartPAC | 1.34.0 | QuasR | 1.42.1 |
| QuaternaryProd | 1.36.0 | QUBIC | 1.30.0 |
| questionr | 0.7.8 | QuickJSR | 1.1.3 |
| qusage | 2.36.0 | qvalue | 2.34.0 |
| qvcalc | 1.0.3 | R.cache | 0.16.0 |
| R.devices | 2.17.2 | R.filesets | 2.15.1 |
| R.huge | 0.10.1 | R.matlab | 3.7.0 |
| R.methodsS3 | 1.8.2 | R.oo | 1.26.0 |
| R.rsp | 0.46.0 | R.utils | 2.12.3 |
| R2HTML | 2.3.3 | R2jags | 0.7-1.1 |
| R2WinBUGS | 2.1-22.1 | R3CPET | 1.34.1 |
| r3Cseq | 1.48.0 | R453Plus1Toolbox | 1.52.0 |
| R4RNA | 1.30.0 | R6 | 2.5.1 |
| R6P | 0.3.0 | radiant.data | 1.6.3 |
| RadioGx | 2.6.0 | raer | 1.0.2 |
| rafalib | 1.0.0 | ragg | 1.3.0 |
| RaggedExperiment | 1.26.0 | RAIDS | 1.0.0 |
| rain | 1.36.0 | rainbow | 3.8 |
| ramr | 1.10.0 | ramwas | 1.26.0 |
| randomcoloR | 1.1.0.1 | randomForest | 4.7-1.1 |
| randomizr | 1.0.0 | RandomWalkRestartMH | 1.22.0 |
| randPack | 1.48.0 | randRotation | 1.14.0 |
| randtests | 1.0.1 | randtoolbox | 2.0.4 |
| ranger | 0.16.0 | RankAggreg | 0.6.6 |
| RankProd | 3.28.0 | RANN | 2.6.1 |
| rapiclient | 0.1.3 | rapidjsonr | 1.2.0 |
| RApiSerialize | 0.1.2 | rappdirs | 0.3.3 |
| rapportools | 1.1 | RAREsim | 1.6.0 |
| RareVariantVis | 2.30.0 | rARPACK | 0.11-0 |
| Rarr | 1.2.0 | raster | 3.6-26 |
| rawrr | 1.10.2 | RbcBook1 | 1.70.0 |
| Rbec | 1.10.0 | rBeta2009 | 1.0 |
| RBGL | 1.78.0 | rbibutils | 2.2.16 |
| RBioFormats | 1.2.0 | RBioinf | 1.62.0 |
| rBiopaxParser | 2.42.0 | RBM | 1.34.0 |
| rbokeh | 0.5.1 | Rbowtie | 1.42.0 |
| Rbowtie2 | 2.8.0 | rbsurv | 2.60.0 |
| Rbwa | 1.6.0 | RCAS | 1.28.3 |
| RCASPAR | 1.48.0 | rcdk | 3.8.1 |
| rcdklibs | 2.9 | rcellminer | 2.24.0 |
| rcellminerData | 2.24.0 | rCGH | 1.32.0 |
| RCircos | 1.2.2 | rclipboard | 0.2.1 |
| RCM | 1.18.0 | rcmdcheck | 1.4.0 |
| Rcollectl | 1.2.0 | RColorBrewer | 1.1-3 |
| Rcpi | 1.38.0 | Rcpp | 1.0.12 |
| RcppAlgos | 2.8.3 | RcppAnnoy | 0.0.22 |
| RcppArmadillo | 0.12.8.1.0 | RcppCCTZ | 0.2.12 |
| RcppDate | 0.0.3 | RcppDE | 0.1.7 |
| RcppDist | 0.1.1 | RcppEigen | 0.3.4.0.0 |
| RcppGSL | 0.3.13 | RcppHNSW | 0.6.0 |
| RcppInt64 | 0.0.4 | RcppML | 0.3.7 |
| RcppNumerical | 0.6-0 | RcppParallel | 5.1.7 |
| RcppProgress | 0.4.2 | RcppRoll | 0.3.0 |
| RcppSpdlog | 0.0.16 | RcppThread | 2.1.7 |
| RcppTOML | 0.2.2 | RcppZiggurat | 0.1.6 |
| RCurl | 1.98-1.14 | Rcwl | 1.18.0 |
| RcwlPipelines | 1.18.1 | RCX | 1.6.0 |
| RCy3 | 2.22.1 | RCyjs | 2.24.0 |
| rDGIdb | 1.28.0 | Rdisop | 1.62.0 |
| rdist | 0.0.5 | Rdpack | 2.6 |
| RDRToolbox | 1.52.0 | reactable | 0.4.4 |
| reactome.db | 1.86.2 | ReactomeContentService4R | 1.10.0 |
| ReactomeGraph4R | 1.10.0 | ReactomeGSA | 1.16.1 |
| ReactomePA | 1.46.0 | reactR | 0.5.0 |
| readbitmap | 0.1.5 | reader | 1.0.6 |
| readJDX | 0.6.4 | ReadqPCR | 1.48.0 |
| readr | 2.1.5 | readxl | 1.4.3 |
| REBET | 1.20.0 | rebook | 1.12.0 |
| rebus | 0.1-3 | rebus.base | 0.0-3 |
| rebus.datetimes | 0.0-2 | rebus.numbers | 0.0-1 |
| rebus.unicode | 0.0-2 | receptLoss | 1.14.0 |
| recipes | 1.0.10 | reconsi | 1.14.0 |
| RecordLinkage | 0.4-12.4 | recount | 1.28.0 |
| recount3 | 1.12.0 | recountmethylation | 1.12.0 |
| recoup | 1.30.0 | RedeR | 2.6.1 |
| RedisParam | 1.4.0 | REDseq | 1.48.0 |
| redux | 1.1.4 | RefManageR | 1.4.0 |
| regionalpcs | 1.0.0 | RegionalST | 1.0.1 |
| regioneR | 1.34.0 | regioneReloaded | 1.4.0 |
| regionReport | 1.36.0 | registry | 0.5-1 |
| regsplice | 1.28.0 | regutools | 1.14.0 |
| relations | 0.6-13 | reldist | 1.7-2 |
| relimp | 1.0-5 | remaCor | 0.0.18 |
| rematch | 2.0.0 | rematch2 | 2.1.2 |
| remotes | 2.5.0 | REMP | 1.26.0 |
| rentrez | 1.2.3 | renv | 1.0.5 |
| Repitools | 1.48.0 | repmis | 0.5 |
| repo | 2.1.5 | ReportingTools | 2.42.3 |
| reportr | 1.3.0 | reportROC | 3.6 |
| repr | 1.1.6 | reprex | 2.1.0 |
| RepViz | 1.18.0 | ReQON | 1.48.0 |
| reshape | 0.8.9 | reshape2 | 1.4.4 |
| ResidualMatrix | 1.12.0 | RESOLVE | 1.4.0 |
| restfulr | 0.0.15 | restfulSE | 1.24.0 |
| reticulate | 1.35.0 | retrofit | 1.2.0 |
| ReUseData | 1.2.2 | rex | 1.2.1 |
| rexposome | 1.24.1 | rfaRm | 1.14.2 |
| Rfast | 2.1.0 | Rfastp | 1.12.0 |
| rfPred | 1.40.0 | rGADEM | 2.50.0 |
| rGenomeTracks | 1.8.0 | rGenomeTracksData | 0.99.0 |
| rgl | 1.3.1 | RGMQL | 1.22.0 |
| RGMQLlib | 1.22.0 | RgnTX | 1.4.0 |
| rgoslin | 1.6.0 | RGraph2js | 1.30.0 |
| Rgraphviz | 2.46.0 | rGREAT | 2.4.0 |
| RGSEA | 1.36.0 | rgsepd | 1.34.0 |
| rhandsontable | 0.3.8 | rhdf5 | 2.46.1 |
| rhdf5client | 1.24.0 | rhdf5filters | 1.14.1 |
| Rhdf5lib | 1.24.2 | Rhisat2 | 1.18.0 |
| RhpcBLASctl | 0.23-42 | Rhtslib | 2.4.1 |
| RiboCrypt | 1.8.0 | RiboDiPA | 1.10.0 |
| RiboProfiling | 1.32.0 | ribor | 1.14.0 |
| riboSeqR | 1.36.0 | ribosomeProfilingQC | 1.14.1 |
| ridge | 3.3 | rifi | 1.6.0 |
| rifiComparative | 1.2.0 | RImmPort | 1.30.0 |
| Ringo | 1.66.0 | rintrojs | 0.3.4 |
| rio | 1.0.1 | Risa | 1.44.0 |
| RISmed | 2.3.0 | RITAN | 1.26.0 |
| RITANdata | 1.26.0 | RIVER | 1.26.0 |
| rjags | 4-15 | rJava | 1.0-11 |
| RJMCMCNucleosomes | 1.26.0 | rjson | 0.2.21 |
| rjsoncons | 1.2.0 | RJSONIO | 1.3-1.9 |
| Rlab | 4.0 | Rlabkey | 3.2.0 |
| rlang | 1.1.3 | RLassoCox | 1.10.0 |
| RLHub | 0.99.5 | rlist | 0.4.6.2 |
| RLMM | 1.64.0 | RLSeq | 1.5.2 |
| Rmagpie | 1.58.0 | RMallow | 1.1 |
| RMariaDB | 1.3.1 | rmarkdown | 2.26 |
| RMassBank | 3.12.0 | rmdformats | 1.0.4 |
| rmelting | 1.18.0 | rmeta | 3.0 |
| rmio | 0.4.0 | Rmisc | 1.5.1 |
| Rmixmod | 2.1.10 | Rmmquant | 1.20.0 |
| Rmpfr | 0.9-5 | Rmpi | 0.7-2 |
| rms | 6.8-0 | RMSNumpress | 1.0.1 |
| rmspc | 1.8.0 | RMTstat | 0.3.1 |
| rmutil | 1.1.10 | RMySQL | 0.10.27 |
| rmzqc | 0.5.3 | RNAAgeCalc | 1.14.0 |
| RNAdecay | 1.22.2 | rnaEditr | 1.12.0 |
| RNAinteract | 1.50.0 | RNAmodR | 1.16.0 |
| RNAmodR.AlkAnilineSeq | 1.16.0 | RNAmodR.ML | 1.16.0 |
| RNAmodR.RiboMethSeq | 1.16.0 | RNAsense | 1.16.0 |
| rnaseqcomp | 1.32.0 | RNAseqCovarImpute | 1.0.2 |
| RNASeqPower | 1.42.0 | RnaSeqSampleSize | 2.12.0 |
| RnaSeqSampleSizeData | 1.34.0 | RnBeads | 2.20.0 |
| RnBeads.hg19 | 1.34.0 | rncl | 0.8.7 |
| RNeXML | 2.4.11 | rngtools | 1.5.2 |
| rngWELL | 0.10-9 | RNifti | 1.6.1 |
| Rnits | 1.36.0 | RNOmni | 1.0.1.2 |
| roar | 1.38.0 | roastgsa | 1.0.0 |
| robust | 0.7-4 | robustbase | 0.99-2 |
| RobustRankAggreg | 1.2.1 | ROC | 1.78.0 |
| ROCit | 2.1.1 | ROCpAI | 1.14.0 |
| ROCR | 1.0-11 | RolDE | 1.6.0 |
| rols | 2.30.2 | ROntoTools | 2.30.0 |
| Rook | 1.2 | rootSolve | 1.8.2.4 |
| ropls | 1.34.0 | roptim | 0.1.6 |
| rorcid | 0.7.0 | ROSeq | 1.14.0 |
| ROTS | 1.30.0 | roxygen2 | 7.3.1 |
| RPA | 1.58.0 | rpart.plot | 3.1.2 |
| RPMM | 1.25 | rprimer | 1.6.0 |
| rprojroot | 2.0.4 | RProtoBufLib | 2.14.0 |
| rpx | 2.10.0 | Rqc | 1.36.0 |
| rqt | 1.28.0 | rqubic | 1.48.0 |
| rrcov | 1.7-5 | rRDP | 1.36.0 |
| RRHO | 1.42.0 | rrvgo | 1.14.2 |
| rsample | 1.2.0 | Rsamtools | 2.18.0 |
| rsbml | 2.60.0 | rScudo | 1.18.1 |
| rsemmed | 1.12.0 | RSeqAn | 1.22.0 |
| rslurm | 0.6.2 | rsm | 2.10.4 |
| RSNNS | 0.4-17 | Rsolnp | 1.16 |
| rsparse | 0.5.1 | RSpectra | 0.16-1 |
| rSpectral | 1.0.0.10 | rsq | 2.6 |
| RSQLite | 2.3.5 | rstan | 2.32.6 |
| rstantools | 2.4.0 | rstatix | 0.7.2 |
| rstudioapi | 0.15.0 | Rsubread | 2.16.1 |
| rsvd | 1.0.5 | rsvg | 2.6.0 |
| RSVSim | 1.42.0 | rSWeeP | 1.14.0 |
| RTCA | 1.54.0 | RTCGA | 1.32.0 |
| RTCGAToolbox | 2.32.1 | rTensor | 1.4.8 |
| RTN | 2.26.0 | RTNduals | 1.26.0 |
| RTNsurvival | 1.26.0 | RTopper | 1.48.0 |
| Rtpca | 1.12.0 | rtracklayer | 1.62.0 |
| Rtreemix | 1.64.0 | RTriangle | 1.6-0.13 |
| rTRM | 1.40.0 | rTRMui | 1.40.0 |
| Rtsne | 0.17 | Rttf2pt1 | 1.3.12 |
| runibic | 1.24.0 | RUnit | 0.4.33 |
| ruv | 0.9.7.1 | RUVcorr | 1.34.0 |
| RUVnormalize | 1.36.0 | RUVnormalizeData | 1.22.0 |
| RUVSeq | 1.36.0 | rversions | 2.1.2 |
| rvest | 1.0.4 | rvinecopulib | 0.6.3.1.1 |
| Rvisdiff | 1.0.0 | RVS | 1.24.0 |
| RWeka | 0.4-46 | RWekajars | 3.9.3-2 |
| rWikiPathways | 1.22.1 | s2 | 1.1.6 |
| S4Arrays | 1.2.1 | S4Vectors | 0.40.2 |
| safe | 3.42.0 | safetensors | 0.1.2 |
| sagenhaft | 1.72.0 | SAIGEgds | 2.2.1 |
| sampleClassifier | 1.26.0 | sampling | 2.10 |
| SamSPECTRAL | 1.56.0 | sandwich | 3.1-0 |
| sangeranalyseR | 1.12.0 | sangerseqR | 1.38.0 |
| SANTA | 2.38.0 | SARC | 1.0.0 |
| sarks | 1.14.0 | sass | 0.4.9 |
| satuRn | 1.10.0 | SAVER | 1.1.2 |
| SBGNview | 1.16.0 | SBGNview.data | 1.16.0 |
| SBMLR | 1.98.0 | SC3 | 1.30.0 |
| Scale4C | 1.24.0 | ScaledMatrix | 1.10.0 |
| scales | 1.3.0 | scam | 1.2-16 |
| SCAN.UPC | 2.44.0 | scanMiR | 1.8.2 |
| scanMiRApp | 1.8.0 | scanMiRData | 1.8.0 |
| scAnnotatR | 1.8.0 | SCANVIS | 1.16.0 |
| SCArray | 1.10.0 | SCArray.sat | 1.2.1 |
| scater | 1.30.1 | scatterHatch | 1.8.0 |
| scattermore | 1.2 | scatterpie | 0.2.1 |
| scatterplot3d | 0.3-44 | scBFA | 1.16.0 |
| SCBN | 1.20.0 | scBubbletree | 1.4.0 |
| scCB2 | 1.12.0 | scClassify | 1.14.0 |
| sccomp | 1.6.0 | scDataviz | 1.12.0 |
| scDblFinder | 1.16.0 | scDD | 1.26.0 |
| scDDboost | 1.4.0 | scde | 2.30.0 |
| scDesign3 | 1.0.1 | scds | 1.18.0 |
| SCFA | 1.12.0 | scFeatureFilter | 1.22.0 |
| scFeatures | 1.3.2 | scGPS | 1.16.0 |
| schex | 1.16.1 | scHOT | 1.14.0 |
| scico | 1.5.0 | scider | 1.0.0 |
| scifer | 1.4.0 | scmap | 1.24.0 |
| scMerge | 1.18.0 | scMET | 1.4.0 |
| scmeth | 1.22.0 | SCnorm | 1.24.0 |
| scone | 1.26.0 | Sconify | 1.22.0 |
| SCOPE | 1.14.0 | scoreInvHap | 1.24.0 |
| scp | 1.12.0 | scPCA | 1.16.0 |
| scPipe | 2.2.0 | scran | 1.30.2 |
| scReClassify | 1.8.0 | scRecover | 1.18.0 |
| screenCounter | 1.2.0 | ScreenR | 1.4.0 |
| scRepertoire | 1.12.0 | scrime | 1.3.5 |
| scRNAseq | 2.16.0 | scRNAseqApp | 1.2.2 |
| scruff | 1.20.0 | scry | 1.14.0 |
| scrypt | 0.1.6 | scs | 3.2.4 |
| scShapes | 1.8.0 | scTensor | 2.12.0 |
| scTGIF | 1.16.0 | scTHI | 1.14.0 |
| sctransform | 0.4.1 | scTreeViz | 1.8.0 |
| scuttle | 1.12.0 | scviR | 1.2.0 |
| SDAMS | 1.22.0 | sechm | 1.10.0 |
| segmented | 2.0-3 | segmenter | 1.8.0 |
| segmentSeq | 2.36.0 | selectKSigs | 1.14.0 |
| selectr | 0.4-2 | SELEX | 1.34.0 |
| SemDist | 1.36.0 | semisup | 1.26.0 |
| sendmailR | 1.4-0 | seq.hotSPOT | 1.2.0 |
| seq2pathway | 1.34.0 | seq2pathway.data | 1.34.0 |
| seqArchR | 1.6.0 | seqArchRplus | 1.2.0 |
| SeqArray | 1.42.2 | seqbias | 1.50.0 |
| seqCAT | 1.24.0 | seqCNA | 1.48.0 |
| seqCNA.annot | 1.38.0 | seqcombo | 1.24.0 |
| SeqGate | 1.12.0 | SeqGSEA | 1.42.0 |
| seqinr | 4.2-36 | seqLogo | 1.68.0 |
| seqmagick | 0.1.7 | seqminer | 9.4 |
| seqPattern | 1.34.0 | seqsetvis | 1.22.1 |
| SeqSQC | 1.24.0 | seqTools | 1.36.0 |
| SeqVarTools | 1.40.0 | seriation | 1.5.4 |
| servr | 0.29 | sesame | 1.20.0 |
| sesameData | 1.20.0 | sessioninfo | 1.2.2 |
| SEtools | 1.16.0 | setRNG | 2024.2-1 |
| sets | 1.0-25 | settings | 0.2.7 |
| Seurat | 5.0.2 | SeuratObject | 5.0.1 |
| sevenbridges | 1.32.0 | sevenC | 1.22.0 |
| sf | 1.0-15 | sfsmisc | 1.1-17 |
| sftime | 0.2-0 | SGCP | 1.2.0 |
| sgeostat | 1.0-27 | SGSeq | 1.36.0 |
| shades | 1.4.0 | shadowtext | 0.1.3 |
| shape | 1.4.6.1 | SharedObject | 1.16.0 |
| shiny | 1.8.0 | shinyAce | 0.4.2 |
| shinyalert | 3.0.0 | shinyBS | 0.61.1 |
| shinybusy | 0.3.3 | shinycssloaders | 1.0.0 |
| shinycustomloader | 0.9.0 | shinyCyJS | 1.0.0 |
| shinydashboard | 0.7.2 | shinydashboardPlus | 2.0.3 |
| shinyepico | 1.10.0 | shinyFeedback | 0.4.0 |
| shinyFiles | 0.9.3 | shinyHeatmaply | 0.2.0 |
| shinyhelper | 0.3.2 | shinyjqui | 0.4.1 |
| shinyjs | 2.1.0 | shinylogs | 0.2.1 |
| shinymanager | 1.0.410 | shinyMatrix | 0.6.0 |
| shinymeta | 0.2.0.3 | shinyMethyl | 1.38.0 |
| shinypanel | 0.1.5 | shinyscreenshot | 0.2.1 |
| shinythemes | 1.2.0 | shinytitle | 0.1.0 |
| shinytoastr | 2.2.0 | shinyTree | 0.3.1 |
| shinyvalidate | 0.1.3 | shinyWidgets | 0.8.2 |
| ShortRead | 1.60.0 | SIAMCAT | 2.6.0 |
| SICtools | 1.32.0 | SIFT.Hsapiens.dbSNP137 | 1.0.0 |
| SigCheck | 2.34.0 | sigclust | 1.1.0.1 |
| sigFeature | 1.20.0 | SigFuge | 1.40.0 |
| siggenes | 1.76.0 | sights | 1.28.0 |
| signal | 1.8-0 | signatureSearch | 1.16.0 |
| signeR | 2.4.0 | signifinder | 1.4.0 |
| SigsPack | 1.16.0 | sigsquared | 1.34.0 |
| SIM | 1.72.0 | SIMAT | 1.34.0 |
| SimBindProfiles | 1.40.0 | SimBu | 1.4.3 |
| SIMD | 1.20.0 | SimFFPE | 1.14.0 |
| similaRpeak | 1.34.0 | SIMLR | 1.28.0 |
| simona | 1.0.10 | simpIntLists | 1.38.0 |
| simpleCache | 0.4.2 | simpleSeg | 1.4.1 |
| simplifyEnrichment | 1.12.0 | sincell | 1.34.0 |
| single | 1.6.0 | SingleCellExperiment | 1.24.0 |
| SingleCellSignalR | 1.14.0 | singleCellTK | 2.12.2 |
| SingleMoleculeFootprinting | 1.10.0 | SingleR | 2.4.1 |
| singscore | 1.22.0 | SiPSiC | 1.2.2 |
| sitadela | 1.10.0 | sitePath | 1.18.0 |
| sitmo | 2.0.2 | sizepower | 1.72.0 |
| sjlabelled | 1.2.0 | sjmisc | 2.8.9 |
| skewr | 1.34.0 | skmeans | 0.2-16 |
| slalom | 1.24.0 | slam | 0.1-50 |
| slider | 0.3.1 | slingshot | 2.10.0 |
| SLqPCR | 1.68.0 | sm | 2.2-6.0 |
| SMAD | 1.18.0 | SMAP | 1.66.0 |
| SmartSVA | 0.1.3 | smatr | 3.4-8 |
| SMITE | 1.30.0 | smoother | 1.1 |
| smoothie | 1.0-3 | SmoothWin | 3.0.0 |
| smurf | 1.1.5 | SMVar | 1.3.4 |
| sn | 2.1.1 | sna | 2.7-2 |
| SNAGEE | 1.42.0 | SNAGEEdata | 1.38.0 |
| snakecase | 0.11.1 | snapCGH | 1.72.0 |
| snapcount | 1.14.0 | snifter | 1.12.0 |
| snm | 1.50.0 | snow | 0.4-4 |
| SnowballC | 0.7.1 | snowfall | 1.84-6.3 |
| SNPediaR | 1.28.0 | SNPhood | 1.32.0 |
| SNPlocs.Hsapiens.dbSNP144.GRCh37 | 0.99.20 | SNPRelate | 1.36.1 |
| snpStats | 1.52.0 | softImpute | 1.4-1 |
| soGGi | 1.34.0 | som | 0.3-5.1 |
| SomaticSignatures | 2.38.0 | SOMNiBUS | 1.10.0 |
| sonicLength | 1.4.7 | sortable | 0.5.0 |
| SoupX | 1.6.2 | sourcetools | 0.1.7-1 |
| sp | 2.1-3 | SpacePAC | 1.40.0 |
| spacetime | 1.3-1 | spam | 2.10-0 |
| Spaniel | 1.16.0 | sparklyr | 1.8.4 |
| sparrow | 1.8.0 | SparseArray | 1.2.4 |
| SparseM | 1.81 | sparseMatrixStats | 1.14.0 |
| sparseMVN | 0.2.2 | sparsenetgls | 1.20.0 |
| sparsepca | 0.1.2 | SparseSignatures | 2.12.0 |
| sparsesvd | 0.2-2 | spaSim | 1.4.0 |
| SpatialCPie | 1.18.0 | spatialDE | 1.8.1 |
| SpatialDecon | 1.12.3 | SpatialExperiment | 1.12.0 |
| SpatialExtremes | 2.1-0 | SpatialFeatureExperiment | 1.4.0 |
| spatialHeatmap | 2.8.5 | SpatialOmicsOverlay | 1.2.1 |
| SpatialTools | 1.0.5 | spatstat | 3.0-7 |
| spatstat.data | 3.0-4 | spatstat.explore | 3.2-6 |
| spatstat.geom | 3.2-9 | spatstat.linnet | 3.1-4 |
| spatstat.model | 3.2-10 | spatstat.random | 3.2-3 |
| spatstat.sparse | 3.0-3 | spatstat.utils | 3.0-4 |
| spatzie | 1.8.0 | spBayes | 0.4-7 |
| spData | 2.3.0 | spdep | 1.3-3 |
| spdl | 0.0.5 | speaq | 2.7.0 |
| speckle | 1.2.0 | specL | 1.36.0 |
| SpeCond | 1.56.0 | Spectra | 1.12.0 |
| SpectralTAD | 1.18.0 | speedglm | 0.3-5 |
| SPEM | 1.42.0 | SPIA | 2.54.0 |
| SPIAT | 1.4.1 | spicyR | 1.14.3 |
| SpidermiR | 1.32.0 | spikeLI | 2.62.0 |
| spiky | 1.8.0 | spkTools | 1.58.0 |
| splancs | 2.01-44 | splatter | 1.26.0 |
| SpliceWiz | 1.4.1 | SplicingFactory | 1.10.0 |
| SplicingGraphs | 1.42.0 | splineTimeR | 1.30.0 |
| SPLINTER | 1.28.0 | splitstackshape | 1.4.8 |
| splots | 1.68.0 | splus2R | 1.3-5 |
| SpotClean | 1.4.1 | SPOTlight | 1.6.7 |
| spqn | 1.14.0 | spsComps | 0.3.3.0 |
| SPsimSeq | 1.12.0 | spsUtil | 0.2.2 |
| SQLDataFrame | 1.16.1 | sqldf | 0.4-11 |
| SQUADD | 1.52.0 | SQUAREM | 2021.1 |
| squash | 1.0.9 | sRACIPE | 1.18.0 |
| SRAdb | 1.64.0 | srnadiff | 1.22.2 |
| ssc | 2.1-0 | sscu | 2.32.0 |
| sSeq | 1.40.0 | ssize | 1.76.0 |
| sSNAPPY | 1.6.1 | ssPATHS | 1.16.0 |
| ssrch | 1.18.0 | ssviz | 1.36.0 |
| stable | 1.1.6 | stabledist | 0.7-1 |
| stabs | 0.6-4 | stageR | 1.24.0 |
| standR | 1.6.0 | StanHeaders | 2.32.6 |
| staRank | 1.44.0 | StarBioTrek | 1.28.0 |
| stars | 0.6-4 | startupmsg | 0.9.6.1 |
| statebins | 1.4.0 | STATegRa | 1.38.0 |
| Statial | 1.4.5 | statip | 0.2.3 |
| statmod | 1.5.0 | statnet.common | 4.9.0 |
| statTarget | 1.32.0 | STdeconvolve | 1.6.0 |
| stemHypoxia | 1.38.0 | stepNorm | 1.74.0 |
| stJoincount | 1.4.0 | stopwords | 2.3 |
| storr | 1.2.5 | strandCheckR | 1.20.0 |
| strawr | 0.0.91 | Streamer | 1.48.0 |
| strex | 2.0.0 | STRINGdb | 2.14.3 |
| stringdist | 0.9.12 | stringfish | 0.16.0 |
| stringi | 1.8.3 | stringr | 1.5.1 |
| strucchange | 1.5-3 | struct | 1.14.1 |
| Structstrings | 1.18.0 | structToolbox | 1.14.0 |
| StructuralVariantAnnotation | 1.18.0 | styler | 1.10.2 |
| SubCellBarCode | 1.18.0 | subSeq | 1.32.0 |
| SUITOR | 1.4.0 | SummarizedBenchmark | 2.20.0 |
| SummarizedExperiment | 1.32.0 | summarytools | 1.0.1 |
| Summix | 2.8.0 | superheat | 0.1.0 |
| SuperLearner | 2.0-29 | supersigs | 1.10.0 |
| SuppDists | 1.1-9.7 | supraHex | 1.40.0 |
| surfaltr | 1.8.0 | survcomp | 1.52.0 |
| survey | 4.4-1 | survivalAnalysis | 0.3.0 |
| survivalROC | 1.0.3.1 | survivalsvm | 0.0.5 |
| survminer | 0.4.9 | survMisc | 0.5.6 |
| survtype | 1.18.0 | sva | 3.50.0 |
| svaNUMT | 1.8.0 | svaRetro | 1.8.0 |
| svd | 0.5.5 | svglite | 2.1.3 |
| svgPanZoom | 0.3.4 | SVMDO | 1.2.8 |
| svMisc | 1.2.3 | svUnit | 1.0.6 |
| swamp | 1.5.1 | SWATH2stats | 1.32.1 |
| SwathXtend | 2.24.0 | swfdr | 1.28.0 |
| switchBox | 1.38.0 | switchde | 1.28.0 |
| sylly | 0.1-6 | sylly.en | 0.1-3 |
| synapsis | 1.8.0 | synapter | 2.26.0 |
| synergyfinder | 3.10.3 | SynExtend | 1.14.0 |
| synlet | 2.2.0 | SynMut | 1.18.0 |
| syntenet | 1.4.0 | sys | 3.4.2 |
| systemfonts | 1.0.6 | systemPipeR | 2.8.0 |
| systemPipeShiny | 1.12.0 | systemPipeTools | 1.10.0 |
| syuzhet | 1.0.7 | tadar | 1.0.0 |
| TADCompare | 1.12.1 | tagcloud | 0.6 |
| tanggle | 1.8.0 | TAPseq | 1.14.1 |
| target | 1.16.0 | TargetDecoy | 1.8.0 |
| TargetScore | 1.40.0 | TargetSearch | 2.4.2 |
| TBSignatureProfiler | 1.14.0 | TBX20BamSubset | 1.38.0 |
| TCA | 1.2.1 | TCC | 1.42.0 |
| TCGAbiolinks | 2.30.0 | TCGAbiolinksGUI.data | 1.22.0 |
| TCGAutils | 1.22.2 | tcltk2 | 1.2-11 |
| TCseq | 1.26.0 | TDbasedUFE | 1.2.0 |
| TDbasedUFEadv | 1.2.0 | TeachingDemos | 2.13 |
| TEKRABber | 1.6.0 | tensor | 1.5 |
| tensorA | 0.36.2.1 | tensorflow | 2.15.0 |
| TENxIO | 1.4.0 | TENxPBMCData | 1.20.0 |
| tenXplore | 1.24.0 | TEQC | 4.24.0 |
| ternarynet | 1.46.0 | terra | 1.7-71 |
| terraTCGAdata | 1.6.0 | tester | 0.1.7 |
| testthat | 3.2.1 | text2vec | 0.6.4 |
| textclean | 0.9.3 | textshape | 1.7.3 |
| textshaping | 0.3.7 | textstem | 0.1.4 |
| TFARM | 1.24.0 | tfautograph | 0.3.2 |
| TFBSTools | 1.40.0 | TFEA.ChIP | 1.22.0 |
| TFHAZ | 1.24.0 | TFisher | 0.2.0 |
| TFMPvalue | 0.0.9 | tfprobability | 0.15.1 |
| tfruns | 1.5.2 | TFutils | 1.22.0 |
| TH.data | 1.1-2 | threejs | 0.3.3 |
| tibble | 3.2.1 | tictoc | 1.2 |
| tidybayes | 3.0.6 | tidybulk | 1.14.3 |
| tidydr | 0.0.5 | tidygraph | 1.3.1 |
| tidyHeatmap | 1.8.1 | tidyr | 1.3.1 |
| tidyselect | 1.2.1 | tidySingleCellExperiment | 1.12.0 |
| tidySummarizedExperiment | 1.12.0 | tidytext | 0.4.1 |
| tidytidbits | 0.3.2 | tidytree | 0.4.6 |
| tidyverse | 2.0.0 | tiff | 0.1-12 |
| tigre | 1.56.0 | tiledb | 0.24.0 |
| TileDBArray | 1.12.0 | tilingArray | 1.80.0 |
| timechange | 0.3.0 | timecourse | 1.74.0 |
| timeDate | 4032.109 | timeOmics | 1.14.0 |
| timescape | 1.26.0 | timeSeries | 4032.109 |
| TimiRGeN | 1.11.0 | timsac | 1.3.8-4 |
| TIN | 1.34.0 | tinytex | 0.50 |
| tippy | 0.1.0 | TissueEnrich | 1.22.0 |
| TitanCNA | 1.40.0 | tkrplot | 0.0-27 |
| tkWidgets | 1.80.0 | tLOH | 1.10.0 |
| tm | 0.7-12 | TMB | 1.9.10 |
| TMixClust | 1.24.0 | tmvtnorm | 1.6 |
| TNBC.CMS | 1.18.0 | TnT | 1.24.0 |
| TOAST | 1.16.0 | tokenizers | 0.3.0 |
| tomoda | 1.12.0 | tomoseqr | 1.6.0 |
| TOP | 1.2.0 | topconfects | 1.18.0 |
| topdownr | 1.24.0 | topGO | 2.54.0 |
| topicmodels | 0.2-16 | torch | 0.12.0 |
| ToxicoGx | 2.6.0 | TPP | 3.30.0 |
| TPP2D | 1.18.0 | tracktables | 1.36.0 |
| trackViewer | 1.38.1 | tractor.base | 3.4.2 |
| tradeSeq | 1.16.0 | TrajectoryGeometry | 1.10.1 |
| TrajectoryUtils | 1.10.1 | transcriptogramer | 1.24.0 |
| transcriptR | 1.30.0 | transformGamPoi | 1.8.0 |
| transformr | 0.1.5 | transite | 1.20.1 |
| tRanslatome | 1.40.0 | transomics2cytoscape | 1.12.0 |
| transport | 0.14-7 | TransView | 1.46.0 |
| traseR | 1.32.0 | traviz | 1.8.0 |
| TreeAndLeaf | 1.14.0 | treeio | 1.26.0 |
| treekoR | 1.10.0 | treemap | 2.4-4 |
| TreeSummarizedExperiment | 2.10.0 | TREG | 1.6.0 |
| Trendy | 1.24.1 | TRESS | 1.8.0 |
| tricycle | 1.10.0 | triebeard | 0.4.1 |
| trigger | 1.48.0 | trio | 3.40.0 |
| triplex | 1.42.0 | tripr | 1.8.0 |
| tRNA | 1.20.1 | tRNAdbImport | 1.20.1 |
| tRNAscanImport | 1.22.0 | TRONCO | 2.34.0 |
| truncdist | 1.0-2 | truncnorm | 1.0-9 |
| trust | 0.1-8 | TSCAN | 1.40.1 |
| tseries | 0.10-55 | tsne | 0.1-3.1 |
| TSP | 1.2-4 | ttgsea | 1.10.0 |
| TTMap | 1.24.0 | TTR | 0.24.4 |
| ttservice | 0.4.0 | TurboNorm | 1.50.0 |
| TVTB | 1.28.0 | tweeDEseq | 1.48.0 |
| tweedie | 2.3.5 | tweenr | 2.0.3 |
| twilight | 1.78.0 | twoddpcr | 1.26.0 |
| txcutr | 1.8.0 | TxDb.Celegans.UCSC.ce6.ensGene | 3.2.2 |
| TxDb.Dmelanogaster.UCSC.dm3.ensGene | 3.2.2 | TxDb.Dmelanogaster.UCSC.dm6.ensGene | 3.12.0 |
| TxDb.Hsapiens.UCSC.hg18.knownGene | 3.2.2 | TxDb.Hsapiens.UCSC.hg19.knownGene | 3.2.2 |
| TxDb.Hsapiens.UCSC.hg38.knownGene | 3.18.0 | TxDb.Mmusculus.UCSC.mm10.knownGene | 3.10.0 |
| TxDb.Mmusculus.UCSC.mm9.knownGene | 3.2.2 | TxDb.Rnorvegicus.UCSC.rn4.ensGene | 3.2.2 |
| tximeta | 1.20.3 | tximport | 1.30.0 |
| tximportData | 1.30.0 | TypeInfo | 1.68.0 |
| tzdb | 0.4.0 | UCell | 2.6.2 |
| ucminf | 1.2.1 | Ularcirc | 1.20.0 |
| umap | 0.2.10.0 | UMI4Cats | 1.12.0 |
| uncoverappLib | 1.12.0 | UNDO | 1.44.0 |
| unifiedWMWqPCR | 1.38.0 | UniProt.ws | 2.42.0 |
| uniqtag | 1.0.1 | Uniquorn | 2.22.0 |
| units | 0.8-5 | universalmotif | 1.20.0 |
| unmarked | 1.4.1 | updateObject | 1.6.0 |
| UpSetR | 1.4.0 | urca | 1.3-3 |
| urlchecker | 1.0.1 | urltools | 1.7.3 |
| usethis | 2.2.3 | uSORT | 1.28.0 |
| utf8 | 1.2.4 | uuid | 1.2-0 |
| uwot | 0.1.16 | V8 | 4.4.2 |
| VAExprs | 1.8.0 | valr | 0.7.0 |
| VAM | 1.1.0 | VanillaICE | 1.64.1 |
| VarCon | 1.10.0 | VarfromPDB | 2.2.10 |
| varhandle | 2.0.6 | variancePartition | 1.32.5 |
| VariantAnnotation | 1.48.1 | VariantExperiment | 1.16.0 |
| VariantFiltering | 1.38.0 | VariantTools | 1.44.0 |
| varSelRF | 0.7-8 | VaSP | 1.14.0 |
| vbmp | 1.70.0 | vcd | 1.4-12 |
| VCFArray | 1.18.0 | vcfR | 1.15.0 |
| vctrs | 0.6.5 | VDJdive | 1.4.0 |
| VegaMC | 3.40.0 | vegan | 2.6-4 |
| velociraptor | 1.12.0 | veloviz | 1.8.0 |
| venn | 1.12 | VennDetail | 1.18.0 |
| VennDiagram | 1.7.3 | verification | 1.42 |
| VERSO | 1.12.0 | VGAM | 1.1-10 |
| vidger | 1.22.0 | VIM | 6.2.2 |
| vioplot | 0.4.0 | viper | 1.36.0 |
| vipor | 0.4.7 | viridis | 0.6.5 |
| viridisLite | 0.4.2 | visdat | 0.6.0 |
| ViSEAGO | 1.16.0 | visNetwork | 2.1.2 |
| vissE | 1.10.0 | Voyager | 1.4.0 |
| VplotR | 1.12.1 | vroom | 1.6.5 |
| vsclust | 1.4.0 | vsn | 3.70.0 |
| vtpnet | 0.42.0 | vulcan | 1.24.0 |
| waddR | 1.16.0 | waffle | 1.0.2 |
| waiter | 0.2.5 | waldo | 0.5.2 |
| warp | 0.2.1 | wateRmelon | 2.8.0 |
| wavClusteR | 2.36.0 | waveslim | 1.8.4 |
| wavethresh | 4.7.2 | wdm | 0.2.4 |
| weaver | 1.68.0 | webbioc | 1.74.0 |
| webchem | 1.3.0 | webshot | 0.5.5 |
| webutils | 1.2.0 | weitrix | 1.14.0 |
| wesanderson | 0.3.7 | WGCNA | 1.72-5 |
| wheatmap | 0.2.0 | whisker | 0.4.1 |
| widgetTools | 1.80.0 | wiggleplotr | 1.26.0 |
| withr | 3.0.0 | wk | 0.9.1 |
| word2vec | 0.4.0 | wordcloud | 2.6 |
| wordcloud2 | 0.2.1 | wpm | 1.12.0 |
| wppi | 1.10.0 | Wrench | 1.20.0 |
| writexl | 1.5.0 | WriteXLS | 6.5.0 |
| wrswoR | 1.1.1 | xcms | 4.0.2 |
| xcore | 1.6.0 | XDE | 2.48.0 |
| Xeva | 1.18.0 | xfun | 0.42 |
| xgboost | 1.7.7.1 | XINA | 1.20.0 |
| xmapbridge | 1.60.0 | XML | 3.99-0.16.1 |
| xml2 | 1.3.6 | XML2R | 0.0.6 |
| xmlparsedata | 1.0.5 | XNAString | 1.10.0 |
| xopen | 1.0.0 | xtable | 1.8-4 |
| XtraSNPlocs.Hsapiens.dbSNP144.GRCh37 | 0.99.12 | xts | 0.13.2 |
| XVector | 0.42.0 | yaImpute | 1.0-34 |
| yaml | 2.3.8 | yamss | 1.28.0 |
| YAPSA | 1.28.0 | yardstick | 1.3.0 |
| yarn | 1.28.0 | yeastCC | 1.42.0 |
| yeastExpData | 0.48.0 | yesno | 0.1.2 |
| yulab.utils | 0.1.4 | zCompositions | 1.5.0-3 |
| zeallot | 0.1.0 | zellkonverter | 1.12.1 |
| zenith | 1.4.2 | zFPKM | 1.24.0 |
| zinbwave | 1.24.0 | zip | 2.3.1 |
| zlibbioc | 1.48.2 | zoo | 1.8-12 |
| ZygosityPredictor | 1.2.0 |