R: 4.3.0
rstudio-server: 2023.12.1-402
| package | version | package | version |
|---|
| a4 | 1.50.1 | a4Base | 1.50.0 |
| a4Classif | 1.50.0 | a4Core | 1.50.0 |
| a4Preproc | 1.50.0 | a4Reporting | 1.50.0 |
| ABarray | 1.70.0 | abind | 1.4-5 |
| abseqR | 1.20.0 | ABSSeq | 1.56.0 |
| acde | 1.32.0 | ACE | 1.20.0 |
| aCGH | 1.80.0 | ACME | 2.58.0 |
| ada | 2.0-5 | adabag | 5.0 |
| ADaCGH2 | 2.42.0 | ADAM | 1.18.0 |
| ADAMgui | 1.18.0 | additivityTests | 1.1-4.1 |
| adductData | 1.18.0 | adductomicsR | 1.18.0 |
| ade4 | 1.7-22 | adehabitatLT | 0.3.27 |
| adehabitatMA | 0.3.16 | ADGofTest | 0.3 |
| ADImpute | 1.12.0 | admisc | 0.35 |
| adSplit | 1.72.0 | adverSCarial | 1.0.0 |
| AffiXcan | 1.20.0 | affxparser | 1.74.0 |
| affy | 1.80.0 | affycomp | 1.78.0 |
| affyContam | 1.60.0 | affycoretools | 1.74.0 |
| affydata | 1.50.0 | affyILM | 1.54.0 |
| affyio | 1.72.0 | affylmGUI | 1.76.0 |
| affyPLM | 1.78.0 | AffyRNADegradation | 1.48.0 |
| AGDEX | 1.50.0 | aggregateBioVar | 1.12.0 |
| aggregation | 1.0.1 | agilp | 3.34.0 |
| AgiMicroRna | 2.52.0 | agricolae | 1.3-7 |
| AHMassBank | 1.2.1 | AhoCorasickTrie | 0.1.2 |
| AICcmodavg | 2.3-3 | AIMS | 1.34.0 |
| airpart | 1.10.0 | airway | 1.22.0 |
| akima | 0.6-3.4 | akmbiclust | 0.1.0 |
| alabama | 2023.1.0 | alabaster | 1.2.0 |
| alabaster.base | 1.2.1 | alabaster.bumpy | 1.2.0 |
| alabaster.files | 1.0.0 | alabaster.mae | 1.2.0 |
| alabaster.matrix | 1.2.0 | alabaster.ranges | 1.2.0 |
| alabaster.sce | 1.2.0 | alabaster.schemas | 1.2.0 |
| alabaster.se | 1.2.0 | alabaster.spatial | 1.2.0 |
| alabaster.string | 1.2.0 | alabaster.vcf | 1.2.0 |
| ALDEx2 | 1.34.0 | alevinQC | 1.18.0 |
| AlgDesign | 1.2.1 | ALL | 1.44.0 |
| AllelicImbalance | 1.40.0 | alluvial | 0.1-2 |
| AlphaBeta | 1.16.0 | AlpsNMR | 4.4.0 |
| altcdfenvs | 2.64.0 | amap | 0.8-19 |
| AMARETTO | 1.18.0 | AMOUNTAIN | 1.28.0 |
| amplican | 1.24.0 | analogue | 0.17-6 |
| Anaquin | 2.26.0 | ANCOMBC | 2.4.0 |
| AneuFinder | 1.30.0 | AneuFinderData | 1.30.0 |
| ANF | 1.24.1 | animalcules | 1.18.3 |
| animation | 2.7 | annaffy | 1.74.0 |
| anndata | 0.7.5.6 | annmap | 1.44.0 |
| annotate | 1.80.0 | AnnotationDbi | 1.64.1 |
| AnnotationFilter | 1.26.0 | AnnotationForge | 1.44.0 |
| AnnotationHub | 3.10.0 | AnnotationHubData | 1.32.1 |
| annotationTools | 1.76.0 | annotatr | 1.28.0 |
| anota | 1.50.0 | anota2seq | 1.24.0 |
| antiProfiles | 1.42.0 | AnVIL | 1.14.2 |
| AnVILBilling | 1.12.0 | AnVILPublish | 1.12.0 |
| AnVILWorkflow | 1.2.0 | anytime | 0.3.9 |
| aod | 1.3.3 | aods3 | 0.4-1.2 |
| APAlyzer | 1.16.0 | apcluster | 1.4.11 |
| apComplex | 2.68.0 | ape | 5.7-1 |
| apeglm | 1.24.0 | APL | 1.6.1 |
| aplot | 0.2.2 | appreci8R | 1.20.2 |
| archive | 1.1.7 | argparse | 2.2.2 |
| aricode | 1.0.3 | arm | 1.13-1 |
| aroma.affymetrix | 3.2.2 | aroma.apd | 0.7.0 |
| aroma.core | 3.3.1 | aroma.light | 3.32.0 |
| ArrayExpress | 1.62.0 | arrayhelpers | 1.1-0 |
| arrayMvout | 1.60.0 | arrayQuality | 1.80.0 |
| arrayQualityMetrics | 3.58.0 | ARRmData | 1.38.0 |
| ARRmNormalization | 1.42.0 | arrow | 15.0.1 |
| artMS | 1.20.0 | arules | 1.7-7 |
| ASAFE | 1.28.0 | ASEB | 1.46.3 |
| ASGSCA | 1.36.0 | ash | 1.0-15 |
| ashr | 2.2-63 | ASICS | 2.18.1 |
| askpass | 1.2.0 | ASpli | 2.12.0 |
| assertive.base | 0.0-9 | assertive.files | 0.0-2 |
| assertive.numbers | 0.0-2 | assertive.sets | 0.0-3 |
| assertthat | 0.2.1 | AssessORF | 1.20.0 |
| ASSET | 2.20.0 | ASSIGN | 1.38.0 |
| ASURAT | 1.6.0 | ATACCoGAPS | 1.4.0 |
| ATACseqQC | 1.26.0 | ATACseqTFEA | 1.4.0 |
| atena | 1.8.0 | atSNP | 1.18.0 |
| attempt | 0.3.1 | attract | 1.54.0 |
| AUCell | 1.24.0 | autonomics | 1.10.2 |
| available | 1.1.0 | AWFisher | 1.16.0 |
| aws | 2.5-5 | aws.s3 | 0.3.21 |
| aws.signature | 0.6.0 | awsMethods | 1.1-1 |
| awst | 1.10.0 | BaalChIP | 1.28.0 |
| babelgene | 22.9 | backbone | 2.1.3 |
| backports | 1.4.1 | bacon | 1.30.0 |
| BADER | 1.40.0 | BadRegionFinder | 1.30.0 |
| BAGS | 2.42.0 | ballgown | 2.34.0 |
| bambu | 3.4.0 | bamlss | 1.2-3 |
| bamsignals | 1.34.0 | BANDITS | 1.18.1 |
| bandle | 1.6.0 | banocc | 1.26.0 |
| barcodetrackR | 1.10.0 | base64 | 2.0.1 |
| base64enc | 0.1-3 | base64url | 1.4 |
| basecallQC | 1.26.0 | baseline | 1.3-5 |
| BaseSpaceR | 1.46.0 | Basic4Cseq | 1.38.0 |
| BASiCS | 2.14.0 | BASiCStan | 1.4.0 |
| BasicSTARRseq | 1.30.0 | basilisk | 1.14.3 |
| basilisk.utils | 1.14.1 | batchelor | 1.18.1 |
| BatchJobs | 1.9 | BatchQC | 1.30.0 |
| batchtools | 0.9.17 | BayesKnockdown | 1.28.0 |
| bayesm | 3.1-6 | BayesSpace | 1.12.0 |
| bayNorm | 1.20.0 | baySeq | 2.36.0 |
| BB | 2019.10-1 | BBCAnalyzer | 1.32.0 |
| BBmisc | 1.13 | bbmle | 1.0.25.1 |
| bbotk | 0.8.0 | bcellViper | 1.38.0 |
| BCRANK | 1.64.0 | bcSeq | 1.24.0 |
| bdsmatrix | 1.3-7 | beachmat | 2.18.1 |
| beachmat.hdf5 | 1.0.0 | beadarray | 2.52.0 |
| beadarraySNP | 1.68.0 | BeadDataPackR | 1.54.0 |
| beanplot | 1.3.1 | BEARscc | 1.22.0 |
| BEAT | 1.40.0 | BEclear | 2.18.0 |
| beer | 1.6.0 | beeswarm | 0.4.0 |
| bench | 1.1.3 | benchdamic | 1.8.2 |
| benchmarkme | 1.0.8 | benchmarkmeData | 1.0.4 |
| bestNormalize | 1.9.1 | betareg | 3.1-4 |
| bezier | 1.1.2 | BG2 | 1.2.0 |
| BgeeCall | 1.18.1 | BgeeDB | 2.28.0 |
| bgx | 1.68.3 | BH | 1.84.0-0 |
| BHC | 1.54.0 | BiasedUrn | 2.0.11 |
| bibtex | 0.5.1 | BicARE | 1.60.0 |
| biclust | 2.0.3.1 | BiFET | 1.22.0 |
| biganalytics | 1.1.21 | bigassertr | 0.1.6 |
| BiGGR | 1.38.0 | biglm | 0.9-2.1 |
| bigmelon | 1.28.0 | bigmemory | 4.6.4 |
| bigmemory.sri | 0.1.8 | bigparallelr | 0.3.2 |
| bigrquery | 1.5.1 | bigstatsr | 1.5.12 |
| billboarder | 0.4.1 | BindingSiteFinder | 2.0.0 |
| binom | 1.1-1.1 | binr | 1.1.1 |
| bioassayR | 1.40.0 | Biobase | 2.62.0 |
| biobroom | 1.34.0 | biobtreeR | 1.14.0 |
| bioCancer | 1.30.8 | BioCartaImage | 1.0.0 |
| BiocBaseUtils | 1.4.0 | BiocBook | 1.0.0 |
| BiocCheck | 1.38.2 | BiocFHIR | 1.4.0 |
| BiocFileCache | 2.10.1 | BiocGenerics | 0.48.1 |
| biocGraph | 1.64.0 | BiocHail | 1.2.0 |
| BiocHubsShiny | 1.2.0 | BiocIO | 1.12.0 |
| BiocManager | 1.30.22 | BiocNeighbors | 1.20.2 |
| BioCor | 1.26.0 | BiocParallel | 1.36.0 |
| BiocPkgTools | 1.20.0 | BiocSet | 1.16.1 |
| BiocSingular | 1.18.0 | BiocSklearn | 1.24.0 |
| BiocStyle | 2.30.0 | biocthis | 1.12.0 |
| BiocVersion | 3.18.1 | biocViews | 1.70.0 |
| BiocWorkflowTools | 1.28.0 | biodb | 1.10.0 |
| biodbChebi | 1.8.0 | biodbExpasy | 1.6.0 |
| biodbKegg | 1.8.0 | biodbLipidmaps | 1.8.0 |
| biodbMirbase | 1.5.0 | biodbNcbi | 1.6.0 |
| biodbNci | 1.6.0 | biodbUniprot | 1.8.0 |
| bioDist | 1.74.0 | biomaRt | 2.58.2 |
| biomartr | 1.0.7 | biomformat | 1.30.0 |
| BioMVCClass | 1.70.0 | biomvRCNS | 1.42.2 |
| BioNAR | 1.4.4 | BioNERO | 1.10.1 |
| BioNet | 1.62.0 | BioNetStat | 1.22.0 |
| BioQC | 1.30.0 | biosigner | 1.30.0 |
| Biostrings | 2.70.3 | BioTIP | 1.16.0 |
| biotmle | 1.26.0 | biovizBase | 1.50.0 |
| BiRewire | 3.34.0 | biscuiteer | 1.16.0 |
| biscuiteerData | 1.16.0 | BiSeq | 1.42.0 |
| bit | 4.0.5 | bit64 | 4.0.5 |
| bitops | 1.0-7 | biwt | 1.0.1 |
| blacksheepr | 1.16.0 | bladderbatch | 1.40.0 |
| BlandAltmanLeh | 0.3.1 | blima | 1.36.0 |
| BLMA | 1.26.0 | blme | 1.0-5 |
| blob | 1.2.4 | blockmodeling | 1.1.5 |
| BloodGen3Module | 1.10.0 | bluster | 1.12.0 |
| BMA | 3.18.17 | bmp | 0.3 |
| bnbc | 1.24.2 | bnem | 1.10.0 |
| bnlearn | 4.9.3 | bnstruct | 1.0.15 |
| BOBaFIT | 1.6.0 | bookdown | 0.38 |
| BoolNet | 2.1.9 | bootstrap | 2019.6 |
| borealis | 1.6.0 | BPRMeth | 1.28.0 |
| BRAIN | 1.48.0 | brainflowprobes | 1.16.0 |
| branchpointer | 1.28.0 | breakpointR | 1.20.0 |
| breakpointRdata | 1.20.0 | breastCancerVDX | 1.40.0 |
| brendaDb | 1.16.0 | brew | 1.0-10 |
| BRGenomics | 1.14.1 | brglm | 0.7.2 |
| BridgeDbR | 2.12.0 | brio | 1.1.4 |
| BRISC | 1.0.5 | broom | 1.0.5 |
| broom.helpers | 1.14.0 | broom.mixed | 0.2.9.4 |
| BrowserViz | 2.24.0 | bs4Dash | 2.3.3 |
| BSDA | 1.2.2 | BSgenome | 1.70.2 |
| BSgenome.Celegans.UCSC.ce2 | 1.4.0 | BSgenome.Drerio.UCSC.danRer7 | 1.4.0 |
| BSgenome.Ecoli.NCBI.20080805 | 1.3.1000 | BSgenome.Hsapiens.1000genomes.hs37d5 | 0.99.1 |
| BSgenome.Hsapiens.NCBI.GRCh38 | 1.3.1000 | BSgenome.Hsapiens.UCSC.hg18 | 1.3.1000 |
| BSgenome.Hsapiens.UCSC.hg19 | 1.4.3 | BSgenome.Hsapiens.UCSC.hg38 | 1.4.5 |
| BSgenome.Mmusculus.UCSC.mm10 | 1.4.3 | BSgenome.Mmusculus.UCSC.mm9 | 1.4.0 |
| BSgenomeForge | 1.2.1 | bslib | 0.6.1 |
| bsplus | 0.1.4 | bsseq | 1.38.0 |
| BubbleTree | 2.32.0 | BufferedMatrix | 1.66.0 |
| BufferedMatrixMethods | 1.66.0 | bugsigdbr | 1.8.4 |
| BUMHMM | 1.26.0 | bumphunter | 1.44.0 |
| BumpyMatrix | 1.10.0 | BUS | 1.58.0 |
| BUScorrect | 1.20.0 | BUSpaRse | 1.16.1 |
| BUSseq | 1.8.0 | butcher | 0.3.3 |
| BWStest | 0.2.3 | C50 | 0.1.8 |
| ca | 0.71.1 | cachem | 1.0.8 |
| CaDrA | 1.0.2 | CAEN | 1.10.0 |
| CAFE | 1.38.0 | CAGEfightR | 1.22.0 |
| cageminer | 1.8.0 | CAGEr | 2.8.0 |
| Cairo | 1.6-2 | calibrate | 1.7.7 |
| callr | 3.7.5 | calm | 1.16.0 |
| CAMERA | 1.58.0 | canceR | 1.36.7 |
| cancerclass | 1.46.0 | capushe | 1.1.2 |
| car | 3.1-2 | carData | 3.0-5 |
| cardelino | 1.4.0 | Cardinal | 3.4.3 |
| CardinalIO | 1.0.0 | caret | 6.0-94 |
| caretEnsemble | 2.0.3 | CARNIVAL | 2.12.0 |
| casper | 2.36.0 | CATALYST | 1.26.0 |
| catdata | 1.2.4 | Category | 2.68.0 |
| categoryCompare | 1.46.0 | CatEncoders | 0.1.1 |
| caTools | 1.18.2 | CausalR | 1.34.0 |
| cba | 0.2-23 | cbaf | 1.24.0 |
| CBEA | 1.2.0 | cBioPortalData | 2.14.2 |
| CBNplot | 1.2.1 | cbpManager | 1.10.0 |
| ccaPP | 0.3.3 | ccdata | 1.28.0 |
| ccfindR | 1.22.0 | ccImpute | 1.4.0 |
| ccmap | 1.28.0 | CCP | 1.2 |
| CCPlotR | 1.0.0 | CCPROMISE | 1.28.0 |
| ccrepe | 1.38.1 | ccTensor | 1.0.2 |
| CDFt | 1.2 | CDI | 1.0.2 |
| celaref | 1.20.0 | celda | 1.18.1 |
| celestial | 1.4.6 | CellaRepertorium | 1.12.0 |
| CellBarcode | 1.8.1 | cellbaseR | 1.26.0 |
| CellBench | 1.18.0 | celldex | 1.12.0 |
| cellHTS2 | 2.66.0 | CelliD | 1.10.1 |
| cellity | 1.30.0 | CellMapper | 1.28.0 |
| cellmigRation | 1.10.0 | CellMixS | 1.18.0 |
| CellNOptR | 1.48.0 | cellranger | 1.1.0 |
| cellscape | 1.26.0 | CellScore | 1.22.0 |
| CellTrails | 1.20.0 | cellxgenedp | 1.6.1 |
| CEMiTool | 1.26.1 | censcyt | 1.10.0 |
| Cepo | 1.8.0 | ceRNAnetsim | 1.14.1 |
| CeTF | 1.14.0 | CexoR | 1.40.0 |
| CFAssay | 1.36.0 | cfdnakit | 1.0.0 |
| cfDNAPro | 1.8.0 | cfTools | 1.2.0 |
| cfToolsData | 1.0.0 | CGEN | 3.38.0 |
| CGHbase | 1.62.0 | CGHcall | 2.64.0 |
| cghMCR | 1.60.0 | CGHnormaliter | 1.56.0 |
| CGHregions | 1.60.0 | ChAMP | 2.32.0 |
| ChAMPdata | 2.34.0 | changepoint | 2.2.4 |
| changepoint.np | 1.0.5 | checkmate | 2.3.1 |
| ChemmineOB | 1.40.0 | ChemmineR | 3.54.0 |
| chemometrics | 1.4.4 | CHETAH | 1.18.0 |
| Chicago | 1.30.0 | chihaya | 1.2.0 |
| chimeraviz | 1.28.0 | ChIPanalyser | 1.24.0 |
| ChIPComp | 1.32.0 | chipenrich | 2.26.0 |
| chipenrich.data | 2.26.0 | ChIPexoQual | 1.26.0 |
| ChIPpeakAnno | 3.36.1 | ChIPQC | 1.38.0 |
| ChIPseeker | 1.38.0 | chipseq | 1.52.0 |
| ChIPseqR | 1.56.0 | ChIPsim | 1.56.0 |
| ChIPXpress | 1.46.0 | ChIPXpressData | 1.40.0 |
| chk | 0.9.1 | chopsticks | 1.68.0 |
| chromDraw | 2.32.0 | ChromHeatMap | 1.56.0 |
| chromhmmData | 0.99.2 | chromPlot | 1.30.0 |
| ChromSCape | 1.12.0 | chromstaR | 1.28.0 |
| chromstaRData | 1.28.0 | chromVAR | 1.24.0 |
| chron | 2.3-61 | CHRONOS | 1.30.0 |
| cicero | 1.20.0 | CIMICE | 1.10.0 |
| CINdex | 1.30.0 | circlize | 0.4.16 |
| circRNAprofiler | 1.16.0 | CircSeqAlignTk | 1.4.0 |
| CircStats | 0.2-6 | circular | 0.5-0 |
| cisPath | 1.42.0 | CiteFuse | 1.14.0 |
| Ckmeans.1d.dp | 4.3.5 | ClassifyR | 3.6.5 |
| classInt | 0.4-10 | cleanUpdTSeq | 1.40.0 |
| cleaver | 1.40.0 | clevRvis | 1.2.0 |
| cli | 3.6.2 | clippda | 1.52.0 |
| clipper | 1.42.0 | clipr | 0.8.0 |
| cliProfiler | 1.8.0 | cliqueMS | 1.16.0 |
| clisymbols | 1.2.0 | clock | 0.7.0 |
| Clomial | 1.38.0 | clst | 1.50.0 |
| clstutils | 1.50.0 | clue | 0.3-65 |
| CluMSID | 1.18.0 | clustComp | 1.30.0 |
| clusterCons | 1.2 | clusterExperiment | 2.22.0 |
| ClusterJudge | 1.24.0 | clusterProfiler | 4.10.1 |
| ClusterR | 1.3.2 | clusterRepro | 0.9 |
| clusterSeq | 1.26.0 | ClusterSignificance | 1.30.0 |
| clusterSim | 0.51-3 | clusterStab | 1.74.0 |
| clustifyr | 1.14.0 | ClustIRR | 1.0.0 |
| clustree | 0.5.1 | clustvarsel | 2.3.4 |
| clv | 0.3-2.4 | clValid | 0.7 |
| CMA | 1.60.0 | cMAP | 1.15.1 |
| cMap2data | 1.38.0 | cmapR | 1.14.0 |
| cmdfun | 1.0.2 | cn.farms | 1.50.0 |
| cn.mops | 1.48.0 | CNAnorm | 1.48.0 |
| CNEr | 1.38.0 | CNORdt | 1.44.0 |
| CNORfeeder | 1.42.0 | CNORfuzzy | 1.44.0 |
| CNORode | 1.44.0 | CNTools | 1.58.0 |
| CNVfilteR | 1.16.0 | cnvGSA | 1.46.0 |
| CNViz | 1.10.0 | CNVMetrics | 1.6.0 |
| CNVPanelizer | 1.34.0 | CNVRanger | 1.18.1 |
| CNVrd2 | 1.40.0 | cobs | 1.3-8 |
| CoCiteStats | 1.74.0 | COCOA | 2.16.0 |
| coda | 0.19-4.1 | CodeDepends | 0.6.5 |
| codelink | 1.70.0 | CODEX | 1.34.0 |
| CoGAPS | 3.22.0 | cogena | 1.36.0 |
| cogeqc | 1.6.2 | Cogito | 1.8.0 |
| coGPS | 1.46.0 | COHCAP | 1.48.0 |
| COHCAPanno | 1.38.0 | coin | 1.4-3 |
| cola | 2.8.0 | collapse | 2.0.10 |
| collections | 0.3.7 | colorRamps | 2.3.4 |
| colorspace | 2.1-0 | colourpicker | 1.3.0 |
| colourvalues | 0.3.9 | comapr | 1.6.1 |
| combi | 1.14.0 | combinat | 0.0-8 |
| coMET | 1.34.0 | coMethDMR | 1.6.0 |
| common | 1.1.2 | commonmark | 1.9.1 |
| compareGroups | 4.8.0 | COMPASS | 1.40.0 |
| compcodeR | 1.38.0 | compEpiTools | 1.36.0 |
| ComplexHeatmap | 2.18.0 | ComplexUpset | 1.3.3 |
| compositions | 2.0-8 | CompoundDb | 1.6.0 |
| CompQuadForm | 1.4.3 | ComPrAn | 1.10.0 |
| compSPOT | 1.0.0 | concaveman | 1.1.0 |
| concordexR | 1.2.0 | condformat | 0.10.1 |
| condiments | 1.10.0 | CONFESS | 1.30.0 |
| config | 0.3.2 | configr | 0.3.5 |
| confintr | 1.0.2 | conflicted | 1.2.0 |
| conicfit | 1.0.4 | consensus | 1.20.0 |
| ConsensusClusterPlus | 1.66.0 | consensusDE | 1.20.0 |
| consensusOV | 1.24.0 | consensusSeekeR | 1.30.0 |
| consICA | 2.0.0 | ConsRank | 2.1.4 |
| CONSTANd | 1.10.0 | contiBAIT | 1.30.0 |
| contrast | 0.24.2 | conumee | 1.36.0 |
| convert | 1.78.0 | coop | 0.6-3 |
| copa | 1.70.0 | copula | 1.1-3 |
| CopyNumberPlots | 1.18.0 | coRdon | 1.20.0 |
| CoreGx | 2.6.1 | Cormotif | 1.48.0 |
| coro | 1.0.4 | corpcor | 1.6.10 |
| corral | 1.12.0 | CORREP | 1.68.0 |
| corrgram | 1.14 | corrplot | 0.92 |
| coseq | 1.26.0 | CoSIA | 1.2.0 |
| COSMIC.67 | 1.38.0 | cosmiq | 1.36.0 |
| cosmosR | 1.10.0 | COSNet | 1.36.0 |
| COTAN | 2.2.3 | countrycode | 1.5.0 |
| countsimQC | 1.20.0 | covEB | 1.28.0 |
| CoverageView | 1.40.0 | covr | 3.6.4 |
| covRNA | 1.28.0 | cowplot | 1.1.3 |
| cp4p | 0.3.6 | cplm | 0.7-12 |
| cpp11 | 0.4.7 | cpvSNP | 1.34.0 |
| cqn | 1.48.0 | crayon | 1.5.2 |
| credentials | 2.0.1 | CRImage | 1.50.0 |
| crisprBase | 1.6.0 | crisprBowtie | 1.6.0 |
| crisprBwa | 1.6.0 | crisprDesign | 1.4.0 |
| crisprScore | 1.6.0 | crisprScoreData | 1.6.0 |
| CRISPRseek | 1.42.0 | CrispRVariants | 1.30.0 |
| crisprVerse | 1.4.0 | crisprViz | 1.4.0 |
| crlmm | 1.60.0 | crmn | 0.0.21 |
| crossmeta | 1.28.0 | crosstalk | 1.2.1 |
| crul | 1.4.0 | CSAR | 1.54.0 |
| csaw | 1.36.1 | csdR | 1.8.0 |
| CSSQ | 1.14.0 | ctc | 1.76.0 |
| CTdata | 1.2.0 | CTDquerier | 2.10.0 |
| cTRAP | 1.20.0 | ctsGE | 1.28.0 |
| CTSV | 1.4.0 | cubature | 2.1.0 |
| Cubist | 0.4.2.1 | cummeRbund | 2.44.0 |
| CuratedAtlasQueryR | 1.0.1 | curatedTCGAData | 1.24.1 |
| curl | 5.2.1 | customCMPdb | 1.12.0 |
| customProDB | 1.42.1 | cvar | 0.5 |
| cvAUC | 1.1.4 | cvTools | 0.3.3 |
| CVXR | 1.0-12 | cyanoFilter | 1.10.0 |
| cycle | 1.56.0 | cyclocomp | 1.1.1 |
| cydar | 1.26.0 | CytoDx | 1.22.0 |
| CyTOFpower | 1.8.0 | cytofQC | 1.2.0 |
| CytoGLMM | 1.10.0 | cytoKernel | 1.8.0 |
| cytolib | 2.14.1 | cytomapper | 1.14.0 |
| cytoMEM | 1.6.0 | cytometree | 2.0.2 |
| CytoML | 2.14.0 | CytoPipeline | 1.2.0 |
| CytoPipelineGUI | 1.0.0 | cytoviewer | 1.2.0 |
| dada2 | 1.30.0 | dagLogo | 1.40.0 |
| daMA | 1.74.0 | DAMEfinder | 1.14.0 |
| DaMiRseq | 2.14.0 | DAPAR | 1.34.6 |
| DAPARdata | 1.32.1 | DART | 1.50.0 |
| dashboardthemes | 1.1.6 | data.table | 1.15.2 |
| data.tree | 1.1.0 | datamods | 1.4.5 |
| DataVisualizations | 1.3.2 | datawizard | 0.9.1 |
| DBI | 1.2.2 | dbplyr | 2.5.0 |
| dbscan | 1.1-12 | dcanr | 1.18.0 |
| DCATS | 1.0.0 | dce | 1.10.0 |
| dcGSA | 1.30.0 | ddCt | 1.58.0 |
| ddPCRclust | 1.22.0 | DDRTree | 0.1.5 |
| dearseq | 1.14.0 | debCAM | 1.20.0 |
| debrowser | 1.30.2 | DECIPHER | 2.30.0 |
| decompTumor2Sig | 2.18.0 | DeconRNASeq | 1.44.0 |
| deconstructSigs | 1.8.0 | decontam | 1.22.0 |
| decontX | 1.0.0 | deconvR | 1.8.0 |
| decoupleR | 2.8.0 | DeepPINCS | 1.10.0 |
| deepSNV | 1.48.0 | DEFormats | 1.30.0 |
| DegNorm | 1.12.0 | DEGraph | 1.54.0 |
| DEGreport | 1.38.5 | DEGseq | 1.56.1 |
| Delaporte | 8.3.0 | DelayedArray | 0.28.0 |
| DelayedDataFrame | 1.18.0 | DelayedMatrixStats | 1.24.0 |
| DelayedRandomArray | 1.10.0 | DelayedTensor | 1.8.0 |
| deldir | 2.0-4 | DELocal | 1.2.0 |
| deltaCaptureC | 1.16.0 | deltaGseg | 1.42.0 |
| DeMAND | 1.32.0 | DeMixT | 1.18.0 |
| demuxmix | 1.4.0 | demuxSNP | 1.0.0 |
| dendextend | 1.17.1 | densEstBayes | 1.0-2.2 |
| densvis | 1.12.1 | DEoptimR | 1.1-3 |
| DEP | 1.24.0 | DepecheR | 1.18.0 |
| DepInfeR | 1.6.0 | depmap | 1.16.0 |
| depmixS4 | 1.5-0 | DEqMS | 1.20.0 |
| derfinder | 1.36.0 | derfinderHelper | 1.36.0 |
| derfinderPlot | 1.36.0 | Deriv | 4.1.3 |
| desc | 1.4.3 | DEScan2 | 1.22.0 |
| DescTools | 0.99.54 | DESeq2 | 1.42.1 |
| DEsingle | 1.22.0 | deSolve | 1.40 |
| DESpace | 1.2.1 | destiny | 3.16.0 |
| DEsubs | 1.28.0 | devtools | 2.4.5 |
| DEWSeq | 1.16.2 | DExMA | 1.10.7 |
| DExMAdata | 1.10.0 | DEXSeq | 1.48.0 |
| DFP | 1.60.0 | DGEobj | 1.1.2 |
| DGEobj.utils | 1.0.6 | dgof | 1.4 |
| diagram | 1.6.5 | DiagrammeR | 1.0.11 |
| DIAlignR | 2.10.0 | diceR | 2.2.0 |
| dichromat | 2.0-0.1 | DiffBind | 3.12.0 |
| diffcoexp | 1.22.0 | DiffCorr | 0.4.3 |
| diffcyt | 1.22.1 | DifferentialRegulation | 2.0.3 |
| diffGeneAnalysis | 1.84.0 | diffHic | 1.34.0 |
| DiffLogo | 2.26.0 | diffobj | 0.3.5 |
| diffr | 0.1 | diffuStats | 1.22.0 |
| diffUTR | 1.10.0 | digest | 0.6.35 |
| diggit | 1.34.0 | Dino | 1.8.0 |
| diptest | 0.77-0 | dir.expiry | 1.10.0 |
| directlabels | 2024.1.21 | Director | 1.28.0 |
| directPA | 1.5.1 | DirichletMultinomial | 1.44.0 |
| DirichletReg | 0.7-1 | dirmult | 0.1.3-5 |
| discordant | 1.26.0 | DiscoRhythm | 1.18.0 |
| distances | 0.1.10 | distillery | 1.2-1 |
| distinct | 1.14.5 | distr | 2.9.3 |
| distrEx | 2.9.2 | distributional | 0.4.0 |
| distributions3 | 0.2.1 | dittoSeq | 1.14.3 |
| divergence | 1.18.0 | dixonTest | 1.0.4 |
| dks | 1.48.0 | DMCFB | 1.16.1 |
| DMCHMM | 1.24.0 | dml | 1.1.0 |
| DMRcaller | 1.34.0 | DMRcate | 2.16.1 |
| DMRScan | 1.24.0 | dmrseq | 1.22.1 |
| DMwR2 | 0.0.2 | DNABarcodeCompatibility | 1.18.0 |
| DNABarcodes | 1.32.0 | DNAcopy | 1.76.0 |
| DNAfusion | 1.4.0 | DNAshapeR | 1.30.0 |
| dnet | 1.1.7 | doBy | 4.6.20 |
| docopt | 0.7.1 | doFuture | 1.0.1 |
| doMC | 1.3.8 | DominoEffect | 1.22.0 |
| doParallel | 1.0.17 | doppelgangR | 1.30.0 |
| doRNG | 1.8.6 | dorothea | 1.14.1 |
| Doscheda | 1.24.0 | DOSE | 3.28.2 |
| doseR | 1.18.0 | doSNOW | 1.0.20 |
| dotCall64 | 1.1-1 | doubletrouble | 1.2.5 |
| downlit | 0.4.3 | downloader | 0.4 |
| downloadthis | 0.3.3 | dplyr | 1.1.4 |
| dqrng | 0.3.2 | drawer | 0.2.0.1 |
| drawProteins | 1.22.2 | drc | 3.0-1 |
| dreamlet | 1.0.3 | DrImpute | 1.0 |
| DRIMSeq | 1.30.0 | DriverNet | 1.42.0 |
| DropletUtils | 1.22.0 | drtmle | 1.1.2 |
| drugTargetInteractions | 1.10.1 | DrugVsDisease | 2.44.0 |
| DrugVsDiseasedata | 1.38.0 | DSS | 2.50.1 |
| dStruct | 1.8.0 | DT | 0.32 |
| DTA | 2.48.0 | dtangle | 2.0.9 |
| dtplyr | 1.3.1 | dtt | 0.1-2 |
| dtw | 1.23-1 | duckdb | 0.10.0 |
| Dune | 1.14.0 | dunn.test | 1.3.5 |
| dupRadar | 1.32.0 | dyebias | 1.62.0 |
| dynamicTreeCut | 1.63-1 | DynDoc | 1.80.0 |
| e1071 | 1.7-14 | earth | 5.3.3 |
| easier | 1.8.0 | easierData | 1.8.0 |
| easycsv | 1.0.8 | easylift | 1.0.0 |
| easyPubMed | 2.13 | easyreporting | 1.14.0 |
| easyRNASeq | 2.38.0 | EBarrays | 2.66.0 |
| EBcoexpress | 1.46.0 | EBImage | 4.44.0 |
| EBSEA | 1.30.0 | EBSeq | 2.0.0 |
| EBSeqHMM | 1.35.0 | echarts4r | 0.4.5 |
| ecolitk | 1.74.0 | ECOSolveR | 0.5.5 |
| ecp | 3.1.5 | Ecume | 0.9.1 |
| EDASeq | 2.36.0 | edge | 2.34.0 |
| edgeR | 4.0.16 | EDIRquery | 1.2.0 |
| eds | 1.4.0 | effsize | 0.8.1 |
| EGAD | 1.30.0 | egg | 0.4.5 |
| EGSEA | 1.30.1 | EGSEAdata | 1.30.0 |
| einsum | 0.1.2 | eiR | 1.42.0 |
| eisaR | 1.14.1 | elasticnet | 1.3 |
| elitism | 1.1.1 | ellipse | 0.5.0 |
| ellipsis | 0.3.2 | ELMER | 2.26.0 |
| ELMER.data | 2.26.0 | emdbook | 1.3.13 |
| emdist | 0.3-3 | EMDomics | 2.32.0 |
| emmeans | 1.10.0 | EmpiricalBrownsMethod | 1.30.0 |
| energy | 1.7-11 | english | 1.2-6 |
| EnhancedVolcano | 1.20.0 | enhancerHomologSearch | 1.8.3 |
| EnMCB | 1.14.0 | ENmix | 1.38.01 |
| EnrichedHeatmap | 1.32.0 | EnrichmentBrowser | 2.32.0 |
| enrichplot | 1.22.0 | enrichR | 3.2 |
| enrichTF | 1.18.0 | enrichViewNet | 1.0.0 |
| EnsDb.Hsapiens.v75 | 2.99.0 | EnsDb.Hsapiens.v79 | 2.99.0 |
| EnsDb.Hsapiens.v86 | 2.99.0 | EnsDb.Mmusculus.v79 | 2.99.0 |
| ensembldb | 2.26.0 | ensemblVEP | 1.44.0 |
| ensurer | 1.1 | entropy | 1.3.1 |
| enviPat | 2.6 | EnvStats | 2.8.1 |
| epialleleR | 1.10.0 | EpiCompare | 1.6.7 |
| epidecodeR | 1.10.0 | EpiDISH | 2.18.0 |
| epigenomix | 1.42.0 | epigraHMM | 1.10.0 |
| EpiMix | 1.4.0 | EpiMix.data | 1.4.0 |
| epimutacions | 1.6.1 | epimutacionsData | 1.6.0 |
| epiNEM | 1.26.0 | epiR | 2.0.70 |
| epistack | 1.8.0 | epistasisGA | 1.4.0 |
| EpiTxDb | 1.14.1 | epivizr | 2.32.0 |
| epivizrChart | 1.24.0 | epivizrData | 1.30.0 |
| epivizrServer | 1.30.0 | epivizrStandalone | 1.30.0 |
| erccdashboard | 1.36.0 | erma | 1.18.0 |
| ERSSA | 1.20.0 | esATAC | 1.24.0 |
| escape | 1.12.0 | escheR | 1.2.0 |
| esetVis | 1.28.2 | estimability | 1.5 |
| etrunct | 0.1 | eudysbiome | 1.32.0 |
| eulerr | 7.0.1 | eva | 0.2.6 |
| evaluate | 0.23 | evaluomeR | 1.18.0 |
| evd | 2.3-6.1 | EventPointer | 3.10.0 |
| evmix | 2.12 | EWCE | 1.10.2 |
| ewceData | 1.10.0 | Exact | 3.2 |
| exactRankTests | 0.8-35 | excelR | 0.4.0 |
| ExCluster | 1.20.0 | ExiMiR | 2.44.0 |
| exomeCopy | 1.48.0 | exomePeak2 | 1.14.3 |
| ExperimentHub | 2.10.0 | ExperimentHubData | 1.28.0 |
| ExperimentSubset | 1.12.0 | ExploreModelMatrix | 1.14.0 |
| expm | 0.999-9 | ExpressionAtlas | 1.30.0 |
| ExtDist | 0.7-2 | extraChIPs | 1.6.1 |
| extraDistr | 1.10.0 | extrafont | 0.19 |
| extrafontdb | 1.0 | extRemes | 2.1-4 |
| EZtune | 3.1.1 | faahKO | 1.42.0 |
| fabia | 2.48.0 | fabricatr | 1.0.2 |
| factDesign | 1.78.0 | factoextra | 1.0.7 |
| FactoMineR | 2.10 | factR | 1.4.0 |
| FamAgg | 1.30.0 | famat | 1.12.0 |
| fANCOVA | 0.6-1 | fansi | 1.0.6 |
| farver | 2.1.1 | fastcluster | 1.2.6 |
| fastDummies | 1.7.3 | fastICA | 1.2-4 |
| fastLiquidAssociation | 1.38.0 | fastmap | 1.1.1 |
| fastmatch | 1.1-4 | FastqCleaner | 1.20.0 |
| fastreeR | 1.6.0 | fastseg | 1.48.0 |
| fauxpas | 0.5.2 | fBasics | 4032.96 |
| fCCAC | 1.28.0 | fCI | 1.32.0 |
| FCPS | 1.3.4 | fcScan | 1.16.0 |
| fda | 6.1.8 | FDb.InfiniumMethylation.hg19 | 2.2.0 |
| fdrame | 1.74.0 | fdrtool | 1.2.17 |
| fds | 1.8 | FEAST | 1.10.0 |
| FeatSeekR | 1.2.0 | feature | 1.2.15 |
| fedup | 1.10.0 | FELLA | 1.22.0 |
| fenr | 1.0.5 | ff | 4.0.12 |
| ffpe | 1.46.0 | fftw | 1.0-8 |
| fftwtools | 0.9-11 | fGarch | 4032.91 |
| fgga | 1.10.2 | FGNet | 3.36.0 |
| fgsea | 1.28.0 | fields | 15.2 |
| filehash | 2.4-5 | filelock | 1.0.3 |
| filematrix | 1.3 | FilterFFPE | 1.12.0 |
| FindIT2 | 1.8.0 | findpython | 1.0.8 |
| fingerprint | 3.5.7 | FIs | 1.30.0 |
| FISHalyseR | 1.36.0 | fishpond | 2.8.0 |
| fission | 1.22.0 | fit.models | 0.64 |
| fitdistrplus | 1.1-11 | FitHiC | 1.28.0 |
| flagme | 1.58.0 | FLAMES | 1.8.0 |
| flashClust | 1.01-2 | flatxml | 0.1.1 |
| flexclust | 1.4-1 | flexdashboard | 0.6.2 |
| flexmix | 2.3-19 | flextable | 0.9.5 |
| float | 0.3-2 | flock | 0.7 |
| flowAI | 1.32.0 | flowBeads | 1.40.0 |
| flowBin | 1.38.0 | flowcatchR | 1.36.0 |
| flowCHIC | 1.36.0 | flowClean | 1.40.0 |
| flowClust | 3.40.0 | flowCore | 2.14.2 |
| flowCut | 1.12.0 | flowCyBar | 1.38.0 |
| flowDensity | 1.36.1 | flowFP | 1.60.0 |
| flowGate | 1.2.0 | flowGraph | 1.10.0 |
| flowMatch | 1.38.0 | flowMeans | 1.62.0 |
| flowMerge | 2.50.0 | flowPeaks | 1.48.0 |
| flowPloidy | 1.28.0 | flowPlots | 1.50.0 |
| FlowSOM | 2.10.0 | FlowSorted.Blood.450k | 1.40.0 |
| flowSpecs | 1.16.0 | flowStats | 4.14.1 |
| flowTime | 1.26.0 | flowTrans | 1.54.0 |
| flowViz | 1.66.0 | flowVS | 1.34.0 |
| flowWorkspace | 4.14.3 | fmcsR | 1.44.0 |
| FME | 1.3.6.3 | fmrs | 1.12.0 |
| fmsb | 0.7.6 | FMStable | 0.1-4 |
| FNN | 1.1.4 | fobitools | 1.10.0 |
| fontawesome | 0.5.2 | fontBitstreamVera | 0.1.1 |
| fontLiberation | 0.1.0 | fontquiver | 0.2.1 |
| forcats | 1.0.0 | foreach | 1.5.2 |
| forecast | 8.22.0 | forestplot | 3.1.3 |
| formatR | 1.14 | formattable | 0.2.1 |
| Formula | 1.2-5 | formula.tools | 1.7.1 |
| fpc | 2.2-11 | fracdiff | 1.5-3 |
| FRASER | 1.14.1 | frenchFISH | 1.14.0 |
| FreqProf | 0.0.1 | fresh | 0.2.0 |
| FRGEpistasis | 1.38.0 | frma | 1.54.0 |
| frmaTools | 1.54.0 | fs | 1.6.3 |
| FSelector | 0.34 | fst | 0.9.8 |
| fstcore | 0.9.18 | FunChIP | 1.28.0 |
| funtooNorm | 1.26.0 | furrr | 0.3.1 |
| FuseSOM | 1.4.0 | futile.logger | 1.4.3 |
| futile.options | 1.0.1 | future | 1.33.1 |
| future.apply | 1.11.1 | fuzzyjoin | 0.1.6 |
| GA | 3.2.4 | GA4GHclient | 1.26.0 |
| GA4GHshiny | 1.24.0 | gaga | 2.48.0 |
| gage | 2.52.0 | gaggle | 1.70.0 |
| gam | 1.22-3 | gamlss | 5.4-20 |
| gamlss.data | 6.0-6 | gamlss.dist | 6.1-1 |
| gap | 1.5-3 | gap.datasets | 0.0.6 |
| GAprediction | 1.28.0 | garfield | 1.30.0 |
| gargle | 1.5.2 | GARS | 1.22.0 |
| GateFinder | 1.22.0 | gatom | 1.0.0 |
| gbm | 2.1.9 | GBScleanR | 1.6.0 |
| gbutils | 0.5 | gcapc | 1.26.0 |
| gcatest | 2.2.0 | gclus | 1.3.2 |
| gCrisprTools | 2.8.0 | gcrma | 2.74.0 |
| gcspikelite | 1.40.0 | gdata | 3.0.0 |
| GDCRNATools | 1.22.0 | gDNAx | 1.0.2 |
| gDR | 1.0.0 | gDRcore | 1.0.1 |
| gDRimport | 1.0.0 | gDRstyle | 1.0.0 |
| gDRutils | 1.0.0 | GDSArray | 1.22.0 |
| gdsfmt | 1.38.0 | gdtools | 0.3.7 |
| geeM | 0.10.1 | geepack | 1.3.10 |
| geigen | 2.3 | GEM | 1.28.0 |
| gemini | 1.16.0 | gemma.R | 2.0.0 |
| genalg | 0.2.1 | genArise | 1.78.0 |
| geneAttribution | 1.28.0 | GeneBreak | 1.32.0 |
| geneClassifiers | 1.26.0 | GeneExpressionSignature | 1.48.0 |
| genefilter | 1.84.0 | genefu | 2.34.0 |
| GeneGA | 1.52.0 | GeneGeneInteR | 1.28.0 |
| geneLenDataBase | 1.38.0 | GeneMeta | 1.74.0 |
| GeneNet | 1.2.16 | GeneNetworkBuilder | 1.44.0 |
| GeneOverlap | 1.38.0 | geneplast | 1.28.0 |
| geneplotter | 1.80.0 | geneRecommender | 1.74.0 |
| GeneRegionScan | 1.58.0 | generics | 0.1.3 |
| geneRxCluster | 1.38.0 | GeneSelectMMD | 2.46.0 |
| GENESIS | 2.32.0 | GeneStructureTools | 1.22.0 |
| geNetClassifier | 1.42.0 | genetics | 1.3.8.1.3 |
| GeneticsPed | 1.64.0 | GeneTonic | 2.6.0 |
| geneXtendeR | 1.28.0 | GENIE3 | 1.24.0 |
| genieclust | 1.1.5-2 | genlasso | 1.6.1 |
| GENLIB | 1.1.10 | genoCN | 1.54.0 |
| genomation | 1.34.0 | GenomAutomorphism | 1.4.0 |
| GenomeInfoDb | 1.38.8 | GenomeInfoDbData | 1.2.11 |
| genomeIntervals | 1.58.0 | genomes | 3.32.0 |
| GenomicAlignments | 1.38.2 | GenomicDataCommons | 1.26.0 |
| GenomicDistributions | 1.10.0 | GenomicFeatures | 1.54.4 |
| GenomicFiles | 1.38.0 | genomicInstability | 1.8.0 |
| GenomicInteractionNodes | 1.6.0 | GenomicInteractions | 1.36.0 |
| GenomicOZone | 1.16.0 | GenomicPlot | 1.0.5 |
| GenomicRanges | 1.54.1 | GenomicScores | 2.14.3 |
| GenomicState | 0.99.15 | GenomicSuperSignature | 1.10.0 |
| GenomicTools.fileHandler | 0.1.5.9 | GenomicTuples | 1.36.0 |
| GenProSeq | 1.6.0 | GenSA | 1.1.14 |
| GenVisR | 1.34.0 | GeoDiff | 1.8.0 |
| GEOexplorer | 1.8.0 | GEOfastq | 1.10.0 |
| GEOmetadb | 1.64.0 | geometry | 0.4.7 |
| GeomxTools | 3.6.2 | GEOquery | 2.70.0 |
| geosphere | 1.5-18 | GEOsubmission | 1.54.0 |
| GeoTcgaData | 2.2.0 | gep2pep | 1.22.0 |
| gert | 2.0.1 | gespeR | 1.34.0 |
| getDEE2 | 1.12.0 | getopt | 1.20.4 |
| GetoptLong | 1.0.5 | getPass | 0.2-4 |
| geva | 1.10.0 | GEWIST | 1.46.0 |
| gfonts | 0.2.0 | gg4way | 1.0.2 |
| ggalluvial | 0.12.5 | GGally | 2.2.1 |
| ggalt | 0.4.0 | gganimate | 1.0.9 |
| ggbeeswarm | 0.7.2 | ggbio | 1.50.0 |
| ggbump | 0.1.0 | ggcorrplot | 0.1.4.1 |
| ggcyto | 1.30.2 | ggdendro | 0.2.0 |
| ggdist | 3.3.2 | ggExtra | 0.10.1 |
| ggfittext | 0.10.2 | ggforce | 0.4.2 |
| ggformula | 0.12.0 | ggfortify | 0.4.16 |
| ggfun | 0.1.4 | gggenes | 0.5.1 |
| ggh4x | 0.2.8 | gghalves | 0.1.4 |
| gghighlight | 0.4.1 | ggimage | 0.3.3 |
| ggiraph | 0.8.9 | ggkegg | 1.0.13 |
| ggm | 2.5.1 | ggmanh | 1.6.0 |
| ggmcmc | 1.5.1.1 | ggmsa | 1.8.0 |
| ggnetwork | 0.5.13 | ggnewscale | 0.4.10 |
| GGPA | 1.14.0 | ggplot.multistats | 1.0.0 |
| ggplot2 | 3.5.0 | ggplotify | 0.1.2 |
| ggpmisc | 0.5.5 | ggpp | 0.5.6 |
| ggprism | 1.0.4 | ggpubr | 0.6.0 |
| ggraph | 2.2.1 | ggrastr | 1.0.2 |
| ggrepel | 0.9.5 | ggridges | 0.5.6 |
| ggsc | 1.0.2 | ggsci | 3.0.2 |
| ggseqlogo | 0.2 | ggside | 0.3.1 |
| ggsignif | 0.6.4 | ggspavis | 1.8.1 |
| ggstar | 1.0.4 | ggstats | 0.5.1 |
| ggtext | 0.1.2 | ggthemes | 5.1.0 |
| ggtree | 3.10.1 | ggtreeDendro | 1.4.0 |
| ggtreeExtra | 1.12.0 | ggupset | 0.3.0 |
| ggvenn | 0.1.10 | ggvis | 0.4.9 |
| ggwordcloud | 0.6.1 | gh | 1.4.0 |
| GIGSEA | 1.20.0 | girafe | 1.54.0 |
| GISPA | 1.26.0 | gistr | 0.9.0 |
| git2r | 0.33.0 | gitcreds | 0.1.2 |
| GLAD | 2.66.0 | GladiaTOX | 1.18.0 |
| glasso | 1.11 | gld | 2.6.6 |
| Glimma | 2.12.0 | glm2 | 1.2.1 |
| glmGamPoi | 1.14.3 | glmmTMB | 1.1.8 |
| glmnet | 4.1-8 | glmpca | 0.2.0 |
| glmSparseNet | 1.20.1 | GlobalAncova | 4.20.0 |
| GlobalOptions | 0.1.2 | globals | 0.16.3 |
| globalSeq | 1.30.0 | globaltest | 5.56.0 |
| GloScope | 1.0.0 | glue | 1.7.0 |
| gmapR | 1.44.0 | GmicR | 1.16.0 |
| gmm | 1.8 | gmodels | 2.19.1 |
| gmoviz | 1.14.0 | gmp | 0.7-4 |
| GMRP | 1.30.0 | GNET2 | 1.18.0 |
| gnm | 1.1-5 | GNOSIS | 1.0.0 |
| GO.db | 3.18.0 | GOexpress | 1.36.0 |
| GoFKernel | 2.1-1 | goftest | 1.2-3 |
| GOfuncR | 1.22.2 | golem | 0.4.1 |
| googleAuthR | 2.0.1 | googledrive | 2.1.1 |
| googlesheets4 | 1.1.1 | googleVis | 0.7.1 |
| GOpro | 1.28.0 | goProfiles | 1.64.0 |
| GOSemSim | 2.28.1 | goseq | 1.54.0 |
| GOSim | 1.40.0 | goSorensen | 1.4.0 |
| goSTAG | 1.26.0 | GOstats | 2.68.0 |
| GOsummaries | 2.37.0 | GOTHiC | 1.38.0 |
| goTools | 1.76.0 | gower | 1.0.1 |
| GPA | 1.14.0 | gplots | 3.1.3.1 |
| gpls | 1.74.0 | gProfileR | 0.7.0 |
| gprofiler2 | 0.2.3 | gpuMagic | 1.18.0 |
| gRain | 1.4.1 | GRaNIE | 1.6.1 |
| granulator | 1.10.0 | graper | 1.18.0 |
| graph | 1.80.0 | GraphAlignment | 1.66.0 |
| GraphAT | 1.74.0 | graphite | 1.48.0 |
| graphlayouts | 1.1.1 | GraphPAC | 1.44.0 |
| gRbase | 2.0.1 | GRENITS | 1.54.0 |
| GreyListChIP | 1.34.0 | gridBase | 0.4-7 |
| gridExtra | 2.3 | gridGraphics | 0.5-1 |
| gridSVG | 1.7-5 | gridtext | 0.1.5 |
| grImport | 0.9-7 | GRmetrics | 1.28.0 |
| groHMM | 1.36.0 | grr | 0.9.5 |
| GSA | 1.03.2 | GSALightning | 1.30.0 |
| GSAR | 1.36.0 | GSCA | 2.32.0 |
| gscreend | 1.16.1 | GSEABase | 1.64.0 |
| GSEABenchmarkeR | 1.22.0 | GSEAlm | 1.62.0 |
| GSEAmining | 1.12.0 | gsean | 1.22.0 |
| GSgalgoR | 1.12.0 | gsl | 2.1-8 |
| gsmoothr | 0.1.7 | gson | 0.1.0 |
| GSReg | 1.36.0 | GSRI | 2.50.0 |
| gss | 2.2-7 | gstat | 2.1-1 |
| gsubfn | 0.7 | GSVA | 1.50.1 |
| GSVAdata | 1.38.0 | gtable | 0.3.4 |
| gtools | 3.9.5 | gtrellis | 1.34.0 |
| GUIDEseq | 1.32.0 | Guitar | 2.18.0 |
| GUniFrac | 1.8 | Gviz | 1.46.1 |
| GWAS.BAYES | 1.12.0 | gwascat | 2.34.0 |
| GWASExactHW | 1.2 | GWASTools | 1.48.0 |
| gwasurvivr | 1.20.0 | GWENA | 1.12.0 |
| h5vc | 2.36.0 | h5vcData | 2.22.0 |
| hapFabia | 1.44.0 | hardhat | 1.3.1 |
| HardyWeinberg | 1.7.5 | Harman | 1.30.0 |
| harmonicmeanp | 3.0.1 | HarmonizR | 1.0.0 |
| harmony | 1.2.0 | Harshlight | 1.74.0 |
| hash | 2.2.6.3 | haven | 2.5.4 |
| hca | 1.10.1 | HDCI | 1.0-2 |
| HDF5Array | 1.30.1 | hdf5r | 1.3.10 |
| HDInterval | 0.2.4 | HDO.db | 0.99.1 |
| hdrcde | 3.4 | HDTD | 1.36.0 |
| heatmap3 | 1.1.9 | heatmaply | 1.5.0 |
| heatmaps | 1.26.0 | Heatplus | 3.10.0 |
| HelloRanges | 1.28.0 | HELP | 1.60.0 |
| HEM | 1.74.0 | here | 1.0.1 |
| hermes | 1.6.1 | HERON | 1.0.0 |
| Herper | 1.12.0 | hexbin | 1.28.3 |
| HGC | 1.10.0 | HGNChelper | 0.8.1 |
| hgu133a.db | 3.13.0 | hgu133a2.db | 3.13.0 |
| hgu133plus2.db | 3.13.0 | hgu95a.db | 3.13.0 |
| hgu95av2.db | 3.13.0 | HH | 3.1-52 |
| hiAnnotator | 1.36.0 | HIBAG | 1.38.2 |
| HiCBricks | 1.20.0 | HiCcompare | 1.24.0 |
| HiCDCPlus | 1.10.0 | HiCDOC | 1.4.1 |
| HiCExperiment | 1.2.0 | HiContacts | 1.4.0 |
| HiCool | 1.2.0 | hicVennDiagram | 1.0.2 |
| HiddenMarkov | 1.8-13 | hierGWAS | 1.32.0 |
| hierinf | 1.20.0 | highcharter | 0.9.4 |
| highr | 0.10 | HilbertCurve | 1.32.0 |
| HilbertVis | 1.60.0 | HilbertVisGUI | 1.60.0 |
| HiLDA | 1.16.0 | hipathia | 3.2.0 |
| HIPPO | 1.14.0 | hiReadsProcessor | 1.38.0 |
| HIREewas | 1.20.0 | HiTC | 1.46.0 |
| HiveR | 0.3.63 | hmdbQuery | 1.22.0 |
| Hmisc | 5.1-2 | HMMcopy | 1.44.0 |
| hms | 1.1.3 | Homo.sapiens | 1.3.1 |
| homologene | 1.4.68.19.3.27 | hoodscanR | 1.0.0 |
| hopach | 2.62.0 | howmany | 0.3-1 |
| HPAanalyze | 1.20.0 | hpar | 1.44.0 |
| HPiP | 1.8.0 | hrbrthemes | 0.8.7 |
| HSMMSingleCell | 1.22.0 | htm2txt | 2.2.2 |
| htmlTable | 2.4.2 | htmltools | 0.5.7 |
| HTMLUtils | 0.1.9 | htmlwidgets | 1.6.4 |
| HTqPCR | 1.56.0 | HTSCluster | 2.0.11 |
| HTSeqGenie | 4.32.0 | HTSFilter | 1.42.0 |
| httpcache | 1.2.0 | httpcode | 0.3.0 |
| httpuv | 1.6.14 | httr | 1.4.7 |
| httr2 | 1.0.0 | HubPub | 1.10.1 |
| huge | 1.3.5 | HumanTranscriptomeCompendium | 1.17.0 |
| hummingbird | 1.12.0 | hunspell | 3.0.3 |
| hwriter | 1.3.2.1 | HybridMTest | 1.46.0 |
| hypeR | 2.0.0 | hyperdraw | 1.54.0 |
| hypergraph | 1.74.0 | iASeq | 1.46.0 |
| iasva | 1.20.0 | iBBiG | 1.46.0 |
| ibh | 1.50.0 | iBMQ | 1.42.0 |
| iC10 | 1.5 | iC10TrainingData | 1.3.1 |
| ica | 1.0-3 | iCARE | 1.30.0 |
| Icens | 1.74.0 | icetea | 1.20.0 |
| iCheck | 1.32.0 | iChip | 1.56.0 |
| iClusterPlus | 1.38.0 | iCNV | 1.22.0 |
| iCOBRA | 1.30.0 | ICS | 1.4-1 |
| ICSNP | 1.1-2 | ideal | 1.26.0 |
| IdeoViz | 1.37.0 | idiogram | 1.78.0 |
| IDPmisc | 1.1.21 | idpr | 1.12.0 |
| idr | 1.3 | idr2d | 1.16.0 |
| ids | 1.0.1 | IFAA | 1.4.0 |
| iGC | 1.32.0 | IgGeneUsage | 1.16.0 |
| igraph | 2.0.3 | igvR | 1.22.0 |
| IHW | 1.30.0 | Illumina450ProbeVariants.db | 1.38.0 |
| IlluminaHumanMethylation450kanno.ilmn12.hg19 | 0.6.1 | IlluminaHumanMethylation450kmanifest | 0.4.0 |
| IlluminaHumanMethylationEPICanno.ilm10b2.hg19 | 0.6.0 | IlluminaHumanMethylationEPICanno.ilm10b4.hg19 | 0.6.0 |
| IlluminaHumanMethylationEPICmanifest | 0.3.0 | illuminaio | 0.44.0 |
| ILoReg | 1.12.1 | imager | 0.45.8 |
| IMAS | 1.26.0 | imcRtools | 1.8.0 |
| IMMAN | 1.22.0 | ImmuneSpaceR | 1.30.0 |
| immunoClust | 1.34.0 | immunotation | 1.10.0 |
| imp4p | 1.2 | IMPCdata | 1.38.0 |
| import | 1.3.2 | impute | 1.76.0 |
| imputeLCMD | 2.1 | inaparc | 1.2.0 |
| INDEED | 2.16.0 | ineq | 0.2-13 |
| iNETgrate | 1.0.0 | infercnv | 1.18.1 |
| infinityFlow | 1.12.0 | Informeasure | 1.12.1 |
| infotheo | 1.2.0.1 | ini | 0.3.1 |
| inline | 0.3.19 | InPAS | 2.10.0 |
| INPower | 1.38.0 | insight | 0.19.9 |
| INSPEcT | 1.32.1 | INTACT | 1.2.0 |
| InTAD | 1.22.0 | intansv | 1.42.0 |
| interacCircos | 1.12.0 | InteractionSet | 1.30.0 |
| InteractiveComplexHeatmap | 1.10.0 | interactiveDisplay | 1.40.0 |
| interactiveDisplayBase | 1.40.0 | InterCellar | 2.8.0 |
| IntEREst | 1.26.0 | intergraph | 2.0-4 |
| InterMineR | 1.24.0 | interp | 1.1-6 |
| intervals | 0.15.4 | IntOMICS | 1.2.0 |
| IntramiRExploreR | 1.24.0 | intrinsicDimension | 1.2.0 |
| inum | 1.0-5 | InvariantCausalPrediction | 0.8 |
| invgamma | 1.1 | IONiseR | 2.26.0 |
| iPAC | 1.46.0 | ipdDb | 1.20.0 |
| IPO | 1.28.0 | ipred | 0.9-14 |
| IRanges | 2.36.0 | IRdisplay | 1.1 |
| IRkernel | 1.3.2 | irlba | 2.3.5.1 |
| irr | 0.84.1 | isa2 | 0.3.6 |
| ISAnalytics | 1.12.0 | iSEE | 2.14.0 |
| iSEEde | 1.0.0 | iSEEhex | 1.4.0 |
| iSEEhub | 1.4.0 | iSEEindex | 1.0.0 |
| iSEEpathways | 1.0.0 | iSEEu | 1.14.0 |
| iSeq | 1.54.0 | ISLET | 1.4.0 |
| Iso | 0.0-21 | isoband | 0.2.7 |
| isobar | 1.48.0 | IsoBayes | 1.0.1 |
| ISOcodes | 2024.02.12 | IsoCorrectoR | 1.20.0 |
| IsoCorrectoRGUI | 1.18.0 | IsoformSwitchAnalyzeR | 2.2.0 |
| ISoLDE | 1.30.0 | isomiRs | 1.30.0 |
| isotree | 0.5.24-3 | isva | 1.9 |
| ITALICS | 2.62.0 | ITALICSData | 2.40.0 |
| iterativeBMA | 1.60.0 | iterativeBMAsurv | 1.60.0 |
| iterators | 1.0.14 | iterClust | 1.24.0 |
| itertools | 0.1-3 | IVAS | 2.22.0 |
| ivygapSE | 1.24.0 | IWTomics | 1.26.0 |
| JADE | 2.0-4 | janeaustenr | 1.0.0 |
| janitor | 2.2.0 | JASPAR2016 | 1.30.0 |
| JASPAR2018 | 1.1.1 | jomo | 2.7-6 |
| jpeg | 0.1-10 | jquerylib | 0.1.4 |
| jsonlite | 1.8.8 | jsonvalidate | 1.3.2 |
| kableExtra | 1.4.0 | karyoploteR | 1.28.0 |
| katdetectr | 1.4.0 | KBoost | 1.10.0 |
| KCsmart | 2.60.0 | kde1d | 1.0.7 |
| kebabs | 1.36.0 | KEGGandMetacoreDzPathwaysGEO | 1.22.0 |
| KEGGdzPathwaysGEO | 1.40.0 | KEGGgraph | 1.62.0 |
| KEGGlincs | 1.28.0 | keggorthology | 2.54.0 |
| KEGGREST | 1.42.0 | Kendall | 2.2.1 |
| keras | 2.13.0 | kernlab | 0.9-32 |
| kinship2 | 1.9.6 | KinSwingR | 1.20.0 |
| kissDE | 1.22.0 | kknn | 1.3.1 |
| klaR | 1.7-3 | km.ci | 0.5-6 |
| kmer | 1.1.2 | KMsurv | 0.1-5 |
| knitr | 1.45 | knitrBootstrap | 1.0.3 |
| knn.covertree | 1.0 | KnowSeq | 1.16.0 |
| KOdata | 1.28.0 | kohonen | 3.0.12 |
| koRpus | 0.13-8 | koRpus.lang.en | 0.1-4 |
| kpeaks | 1.1.0 | kpmt | 0.1.0 |
| kriging | 1.2 | ks | 1.14.2 |
| kSamples | 1.2-10 | labeling | 0.4.3 |
| labelled | 2.12.0 | LACE | 2.6.1 |
| laeken | 0.5.3 | lambda.r | 1.2.4 |
| LambertW | 0.6.9-1 | lamW | 2.2.3 |
| LaplacesDemon | 16.1.6 | lapmix | 1.68.0 |
| lars | 1.3 | later | 1.3.2 |
| latex2exp | 0.9.6 | latticeExtra | 0.6-30 |
| lava | 1.8.0 | lavaan | 0.6-17 |
| lazyeval | 0.2.2 | LBE | 1.70.0 |
| lbfgs | 1.2.1.2 | ldblock | 1.32.0 |
| LEA | 3.14.0 | leaps | 3.1 |
| learnr | 0.11.5 | LedPred | 1.36.0 |
| lefser | 1.12.1 | leiden | 0.4.3.1 |
| leidenbase | 0.1.27 | lemur | 1.0.5 |
| les | 1.52.0 | levi | 1.20.0 |
| lexicon | 1.2.1 | lfa | 2.2.0 |
| lfda | 1.1.3 | lgr | 0.4.4 |
| lhs | 1.1.6 | libcoin | 1.0-10 |
| LiblineaR | 2.10-23 | lifecycle | 1.0.4 |
| liger | 2.0.1 | LIM | 1.4.7.1 |
| limma | 3.58.1 | limmaGUI | 1.78.0 |
| limSolve | 1.5.7.1 | LineagePulse | 1.21.0 |
| lineagespot | 1.6.0 | linkcomm | 1.0-14 |
| LinkHD | 1.16.0 | Linnorm | 2.26.0 |
| linprog | 0.9-4 | LinTInd | 1.6.0 |
| lintr | 3.1.1 | lionessR | 1.16.0 |
| lipidr | 2.16.0 | LiquidAssociation | 1.56.0 |
| lisaClust | 1.10.1 | listenv | 0.9.1 |
| lmdme | 1.44.0 | lme4 | 1.1-35.1 |
| lmerTest | 3.1-3 | lmodel2 | 1.7-3 |
| lmom | 3.0 | Lmoments | 1.3-1 |
| lmtest | 0.9-40 | LOBSTAHS | 1.28.0 |
| lobstr | 1.1.2 | locfdr | 1.1-8 |
| locfit | 1.5-9.9 | loci2path | 1.22.0 |
| log4r | 0.4.3 | logger | 0.3.0 |
| logging | 0.10-108 | logicFS | 2.22.0 |
| LogicReg | 1.6.6 | logistf | 1.26.0 |
| logitnorm | 0.8.39 | logNormReg | 0.5-0 |
| logr | 1.3.6 | logspline | 2.1.21 |
| lokern | 1.1-10.1 | LOLA | 1.32.0 |
| longitudinal | 1.1.13 | loo | 2.7.0 |
| LoomExperiment | 1.20.0 | LPE | 1.76.0 |
| LPEadj | 1.62.0 | lpNet | 2.34.2 |
| lpSolve | 5.6.20 | lpSolveAPI | 5.5.2.0-17.11 |
| lpsymphony | 1.30.0 | LRBaseDbi | 2.12.1 |
| LRcell | 1.10.0 | lsa | 0.73.3 |
| LSD | 4.1-0 | lsr | 0.5.2 |
| lubridate | 1.9.3 | lumi | 2.54.0 |
| lumiHumanAll.db | 1.22.0 | LungCancerACvsSCCGEO | 1.38.0 |
| lwgeom | 0.2-14 | LymphoSeq | 1.30.0 |
| LymphoSeqDB | 0.99.2 | M3C | 1.24.0 |
| M3Drop | 1.28.0 | m6Aboost | 1.8.0 |
| Maaslin2 | 1.16.0 | Macarron | 1.6.0 |
| macat | 1.76.0 | maCorrPlot | 1.72.0 |
| MACSQuantifyR | 1.16.0 | MACSr | 1.10.0 |
| made4 | 1.76.0 | MADSEQ | 1.28.0 |
| MafDb.1Kgenomes.phase3.hs37d5 | 3.10.0 | MafDb.ExAC.r1.0.hs37d5 | 3.10.0 |
| MafDb.gnomADex.r2.1.hs37d5 | 3.10.0 | maftools | 2.18.0 |
| MAGAR | 1.10.0 | MAGeCKFlute | 2.6.0 |
| magic | 1.6-1 | magicaxis | 2.4.5 |
| magick | 2.8.3 | magpie | 1.2.0 |
| magrene | 1.4.0 | magrittr | 2.0.3 |
| MAI | 1.8.0 | MAIT | 1.36.0 |
| makecdfenv | 1.78.0 | MALDIquant | 1.22.2 |
| MANOR | 1.74.0 | MantelCorr | 1.72.0 |
| mapplots | 1.5.2 | mapproj | 1.2.11 |
| maPredictDSC | 1.40.0 | maps | 3.4.2 |
| mapscape | 1.26.0 | maptree | 1.4-8 |
| mariner | 1.2.0 | markdown | 1.12 |
| marr | 1.12.0 | marray | 1.80.0 |
| martini | 1.22.0 | maser | 1.20.0 |
| mashr | 0.2.79 | maSigPro | 1.74.0 |
| maskBAD | 1.46.0 | MassArray | 1.54.0 |
| massiR | 1.38.0 | MassSpecWavelet | 1.68.0 |
| MAST | 1.28.0 | mastR | 1.2.3 |
| matchBox | 1.44.0 | matchingR | 1.3.3 |
| mathjaxr | 1.6-0 | matlab | 1.0.4 |
| matrixcalc | 1.0-6 | MatrixEQTL | 2.3 |
| MatrixExtra | 0.1.15 | MatrixGenerics | 1.14.0 |
| MatrixModels | 0.5-3 | MatrixQCvis | 1.10.0 |
| MatrixRider | 1.34.0 | matrixStats | 1.2.0 |
| matrixTests | 0.2.3 | matter | 2.4.1 |
| maxLik | 1.5-2 | maxstat | 0.7-25 |
| MBA | 0.1-0 | MBAmethyl | 1.36.0 |
| MBASED | 1.36.0 | MBCB | 1.56.0 |
| MBECS | 1.6.0 | mbest | 0.6 |
| mbkmeans | 1.18.0 | mboost | 2.9-9 |
| mBPCR | 1.56.0 | MBQN | 2.14.0 |
| mbQTL | 1.2.0 | MBttest | 1.30.0 |
| MCbiclust | 1.26.0 | mcbiopi | 1.1.6 |
| MCL | 1.0 | mclust | 6.1 |
| mclustcomp | 0.3.3 | mcmc | 0.9-8 |
| MCMCglmm | 2.35 | MCMCpack | 1.7-0 |
| MCMCprecision | 0.4.0 | mco | 1.16 |
| mCSEA | 1.22.0 | mCSEAdata | 1.22.0 |
| mdp | 1.22.0 | mdqc | 1.64.0 |
| MDTS | 1.22.0 | MEAL | 1.32.0 |
| MeasurementError.cor | 1.74.0 | MEAT | 1.14.0 |
| MEB | 1.16.0 | MEDIPS | 1.54.0 |
| MEDME | 1.62.0 | mefa | 3.2-8 |
| megadepth | 1.12.0 | MEIGOR | 1.36.2 |
| Melissa | 1.18.0 | memes | 1.10.0 |
| memoise | 2.0.1 | memuse | 4.2-3 |
| Mergeomics | 1.30.0 | MeSHDbi | 1.38.0 |
| meshes | 1.28.0 | meshr | 2.8.0 |
| MesKit | 1.12.0 | MESS | 0.5.12 |
| messina | 1.38.0 | metabCombiner | 1.12.0 |
| metabinR | 1.4.0 | MetaboAnnotation | 1.6.1 |
| MetaboCoreUtils | 1.10.0 | metaboliteIDmapping | 1.0.0 |
| metabolomicsWorkbenchR | 1.12.0 | metabomxtr | 1.36.0 |
| MetaboSignal | 1.32.1 | metaCCA | 1.30.0 |
| MetaCycle | 1.2.0 | MetaCyto | 1.24.0 |
| metadat | 1.2-0 | metafor | 4.4-0 |
| metagene2 | 1.18.0 | metagenomeSeq | 1.43.0 |
| metahdep | 1.60.0 | metaMA | 3.1.3 |
| metaMS | 1.38.0 | MetaNeighbor | 1.22.0 |
| metap | 1.9 | MetaPhOR | 1.4.0 |
| metapod | 1.10.1 | metapone | 1.8.0 |
| metaSeq | 1.42.0 | metaseqR2 | 1.14.0 |
| MetBrewer | 0.2.0 | MetCirc | 1.32.0 |
| methimpute | 1.24.0 | methInheritSim | 1.24.0 |
| MethPed | 1.30.0 | MethReg | 1.12.0 |
| methrix | 1.16.0 | MethTargetedNGS | 1.34.0 |
| MethylAid | 1.36.0 | methylCC | 1.16.0 |
| methylclock | 1.8.0 | methylclockData | 1.10.0 |
| methylGSA | 1.20.0 | methylInheritance | 1.26.0 |
| methylKit | 1.28.0 | MethylMix | 2.32.0 |
| methylMnM | 1.40.0 | methylPipe | 1.36.0 |
| methylscaper | 1.10.0 | MethylSeekR | 1.42.0 |
| methylSig | 1.14.0 | methylumi | 2.48.0 |
| MetID | 1.20.0 | MetNet | 1.20.0 |
| metR | 0.15.0 | mfa | 1.24.0 |
| Mfuzz | 2.62.0 | MGFM | 1.36.0 |
| MGFR | 1.28.0 | MGLM | 0.2.1 |
| mgsa | 1.50.0 | mgsub | 1.7.3 |
| mhsmm | 0.4.21 | mia | 1.10.0 |
| miaSim | 1.8.0 | miaViz | 1.10.0 |
| mice | 3.16.0 | MiChip | 1.56.0 |
| microbenchmark | 1.4.10 | microbiome | 1.24.0 |
| microbiomeDASim | 1.16.0 | microbiomeExplorer | 1.12.0 |
| microbiomeMarker | 1.8.0 | MicrobiomeProfiler | 1.8.0 |
| MicrobiomeStat | 1.1 | MicrobiotaProcess | 1.14.0 |
| microRNA | 1.60.0 | microSTASIS | 1.2.0 |
| MICSQTL | 1.0.0 | midasHLA | 1.10.0 |
| miloR | 1.10.0 | mimager | 1.26.0 |
| mime | 0.12 | mina | 1.10.0 |
| MineICA | 1.42.0 | minet | 3.60.0 |
| minfi | 1.48.0 | MinimumDistance | 1.46.0 |
| miniUI | 0.1.1.1 | minpack.lm | 1.2-4 |
| minqa | 1.2.6 | MiPP | 1.74.0 |
| miQC | 1.10.0 | MIRA | 1.24.0 |
| MiRaGE | 1.44.0 | mirbase.db | 1.2.0 |
| miRBaseVersions.db | 1.1.0 | miRcomp | 1.32.0 |
| miRcompData | 1.32.0 | mirIntegrator | 1.32.0 |
| miRLAB | 1.32.0 | miRNAmeConverter | 1.30.0 |
| miRNApath | 1.62.0 | miRNAtap | 1.36.0 |
| miRNAtap.db | 0.99.10 | mirTarRnaSeq | 1.10.0 |
| misc3d | 0.9-1 | miscTools | 0.6-28 |
| missForest | 1.5 | missMDA | 1.19 |
| missMethyl | 1.36.0 | missRows | 1.22.0 |
| mistyR | 1.10.0 | mitch | 1.14.0 |
| mitml | 0.4-5 | mitoClone2 | 1.8.1 |
| mitools | 2.4 | mixOmics | 6.26.0 |
| mixsmsn | 1.1-10 | mixsqp | 0.3-54 |
| mixtools | 2.0.0 | MKmisc | 1.9 |
| mlapi | 0.1.1 | mlbench | 2.1-3.1 |
| MLInterfaces | 1.82.0 | MLmetrics | 1.1.1 |
| MLP | 1.50.0 | mlr3 | 0.18.0 |
| mlr3learners | 0.6.0 | mlr3measures | 0.5.0 |
| mlr3misc | 0.14.0 | mlr3tuning | 0.20.0 |
| MLSeq | 2.20.0 | mltools | 0.3.5 |
| mmand | 1.6.3 | MMDiff2 | 1.30.0 |
| MMUPHin | 1.16.0 | mnem | 1.18.0 |
| mnormt | 2.1.1 | moanin | 1.10.0 |
| MobilityTransformR | 1.6.0 | mockery | 0.4.4 |
| MODA | 1.28.0 | ModCon | 1.10.0 |
| modeest | 2.4.0 | ModelMetrics | 1.2.2.2 |
| modelr | 0.1.11 | modeltools | 0.2-23 |
| Modstrings | 1.18.0 | MOFA2 | 1.12.1 |
| MOFAdata | 1.18.0 | MOGAMUN | 1.12.0 |
| mogsa | 1.36.0 | MoleculeExperiment | 1.2.2 |
| MOMA | 1.14.0 | moments | 0.14.1 |
| monaLisa | 1.8.0 | monocle | 2.30.0 |
| Moonlight2R | 1.0.0 | MoonlightR | 1.28.0 |
| mosaicCore | 0.9.4.0 | mosaics | 2.40.0 |
| mosbi | 1.8.0 | MOSim | 1.16.0 |
| Motif2Site | 1.6.0 | motifbreakR | 2.16.0 |
| motifcounter | 1.26.0 | MotifDb | 1.44.0 |
| motifmatchr | 1.24.0 | motifStack | 1.46.0 |
| MouseFM | 1.12.0 | MPFE | 1.38.0 |
| mpm | 1.0-23 | mpra | 1.24.0 |
| MPRAnalyze | 1.20.0 | MQmetrics | 1.10.0 |
| mrfDepth | 1.0.16 | mRMRe | 2.1.2.1 |
| msa | 1.34.0 | MSA2dist | 1.6.0 |
| MsBackendMassbank | 1.10.1 | MsBackendMgf | 1.10.0 |
| MsBackendMsp | 1.6.0 | MsBackendRawFileReader | 1.8.1 |
| MsBackendSql | 1.2.0 | MsCoreUtils | 1.14.1 |
| msdata | 0.42.0 | MsDataHub | 1.2.0 |
| MsExperiment | 1.4.0 | MsFeatures | 1.10.0 |
| msgbsR | 1.26.0 | msgps | 1.3.5 |
| msigdb | 1.10.0 | msigdbr | 7.5.1 |
| msImpute | 1.12.0 | mslp | 1.4.0 |
| msm | 1.7.1 | msmsEDA | 1.40.0 |
| msmsTests | 1.40.0 | MSnbase | 2.28.1 |
| MSnID | 1.36.0 | MSPrep | 1.12.0 |
| msPurity | 1.28.0 | MSQC | 1.1.0 |
| msqrob2 | 1.10.0 | MsQuality | 1.2.1 |
| MSstats | 4.10.1 | MSstatsBig | 1.0.0 |
| MSstatsConvert | 1.12.1 | MSstatsLiP | 1.8.1 |
| MSstatsLOBD | 1.10.0 | MSstatsPTM | 2.4.4 |
| MSstatsQC | 2.20.0 | MSstatsQCgui | 1.22.0 |
| MSstatsShiny | 1.4.3 | MSstatsTMT | 2.10.0 |
| MuData | 1.6.0 | Mulcom | 1.52.0 |
| multcomp | 1.4-25 | multcompView | 0.1-10 |
| MultiAssayExperiment | 1.28.0 | MultiBaC | 1.12.0 |
| multiClust | 1.32.0 | multicool | 1.0.1 |
| MultiDataSet | 1.30.0 | multiGSEA | 1.12.0 |
| multiHiCcompare | 1.20.0 | MultiMed | 2.24.0 |
| multiMiR | 1.24.0 | MultimodalExperiment | 1.2.0 |
| MultiRNAflow | 1.0.0 | multiscan | 1.62.0 |
| multiWGCNA | 1.0.0 | multtest | 2.58.0 |
| mumosa | 1.10.0 | MungeSumstats | 1.10.1 |
| munsell | 0.5.0 | Mus.musculus | 1.3.1 |
| muscat | 1.16.0 | muscle | 3.44.0 |
| musicatk | 1.12.0 | MutationalPatterns | 3.12.0 |
| mutoss | 0.1-13 | MVCClass | 1.76.0 |
| mvnfast | 0.2.8 | mvoutlier | 2.1.1 |
| mvtnorm | 1.2-4 | MWASTools | 1.26.0 |
| mwcsr | 0.1.8 | mygene | 1.38.0 |
| myvariant | 1.32.0 | mzID | 1.40.0 |
| mzR | 2.36.0 | nabor | 0.5.0 |
| NADA | 1.6-1.1 | NADfinder | 1.26.0 |
| naivebayes | 1.0.0 | naniar | 1.1.0 |
| NanoMethViz | 2.8.1 | NanoStringDiff | 1.32.0 |
| NanoStringNCTools | 1.10.0 | nanotatoR | 1.18.0 |
| nanotime | 0.3.7 | NanoTube | 1.8.0 |
| naturalsort | 0.1.3 | NBAMSeq | 1.18.0 |
| NbClust | 3.0.1 | NBPSeq | 0.3.1 |
| ncdf4 | 1.22 | ncdfFlow | 2.48.0 |
| ncGTW | 1.16.0 | NCIgraph | 1.50.0 |
| NCmisc | 1.2.0 | ncRNAtools | 1.12.0 |
| ndexr | 1.24.0 | nearBynding | 1.12.0 |
| Nebulosa | 1.12.1 | nempi | 1.10.0 |
| neo4r | 0.1.1 | NetActivity | 1.4.0 |
| NetActivityData | 1.4.0 | netbiov | 1.36.0 |
| netboost | 2.10.0 | netDx | 1.14.0 |
| nethet | 1.34.0 | netOmics | 1.8.0 |
| NetPathMiner | 1.38.0 | netprioR | 1.28.0 |
| NetRep | 1.2.7 | netresponse | 1.62.0 |
| NetSAM | 1.42.0 | netSmooth | 1.22.0 |
| network | 1.18.2 | networkD3 | 0.4 |
| netZooR | 1.6.0 | NeuCA | 1.8.1 |
| NewWave | 1.12.0 | NGLVieweR | 1.3.1 |
| ngsReports | 2.4.0 | NHPoisson | 3.3 |
| nipalsMCIA | 1.0.0 | NISTunits | 1.0.1 |
| nleqslv | 3.3.5 | nloptr | 2.0.3 |
| NLP | 0.2-1 | nls2 | 0.3-3 |
| NMF | 0.27 | NMI | 2.0 |
| nnlasso | 0.3 | nnls | 1.5 |
| nnNorm | 2.66.0 | nnSVG | 1.6.4 |
| nnTensor | 1.2.0 | NOISeq | 2.46.0 |
| nondetects | 2.32.0 | nor1mix | 1.3-2 |
| NoRCE | 1.14.0 | norm | 1.0-11.1 |
| normalize450K | 1.30.0 | NormalyzerDE | 1.20.0 |
| NormqPCR | 1.48.0 | normr | 1.28.0 |
| nortest | 1.0-4 | Nozzle.R1 | 1.1-1.1 |
| np | 0.60-17 | NPARC | 1.14.0 |
| npGSEA | 1.38.0 | nsga2R | 1.1 |
| NTW | 1.52.0 | nucleoSim | 1.30.0 |
| nucleR | 2.34.0 | nuCpos | 1.20.0 |
| nullranges | 1.8.0 | numbers | 0.8-5 |
| numDeriv | 2016.8-1.1 | NuPoP | 2.10.0 |
| NxtIRFdata | 1.8.0 | oaqc | 1.0 |
| objectProperties | 0.6.8 | objectSignals | 0.10.3 |
| occugene | 1.62.0 | OCplus | 1.76.0 |
| octad | 1.4.0 | octad.db | 1.4.0 |
| odseq | 1.30.0 | officer | 0.6.5 |
| OGRE | 1.6.0 | oligo | 1.66.0 |
| oligoClasses | 1.64.0 | OLIN | 1.80.0 |
| OLINgui | 1.76.0 | omada | 1.4.0 |
| OmaDB | 2.18.0 | omicade4 | 1.42.0 |
| OmicCircos | 1.40.0 | omicplotR | 1.22.0 |
| omicRexposome | 1.24.3 | OMICsPCA | 1.20.0 |
| OMICsPCAdata | 1.20.0 | omicsPrint | 1.22.0 |
| omicsViewer | 1.6.0 | Omixer | 1.12.0 |
| OmnipathR | 3.10.1 | ompBAM | 1.6.0 |
| oncomix | 1.24.0 | oncoscanR | 1.4.0 |
| OncoScore | 1.30.0 | OncoSimulR | 4.4.0 |
| onlineFDR | 2.10.0 | ontologyIndex | 2.12 |
| ontologyPlot | 1.7 | ontoProc | 1.24.0 |
| openair | 2.18-2 | opencpu | 2.2.11 |
| openCyto | 2.14.0 | openPrimeR | 1.24.0 |
| openPrimeRui | 1.24.0 | openssl | 2.1.1 |
| OpenStats | 1.14.0 | openxlsx | 4.2.5.2 |
| operator.tools | 1.6.3 | oposSOM | 2.20.0 |
| oppar | 1.30.0 | oppti | 1.16.0 |
| optimalFlow | 1.14.0 | optimalFlowData | 1.14.0 |
| optimx | 2023-10.21 | optparse | 1.7.4 |
| OPWeight | 1.24.0 | OrderedList | 1.74.0 |
| ordinal | 2023.12-4 | ore | 1.7.4.1 |
| ORFhunteR | 1.10.0 | ORFik | 1.22.2 |
| org.Bt.eg.db | 3.18.0 | org.Ce.eg.db | 3.18.0 |
| org.Dm.eg.db | 3.18.0 | org.Dr.eg.db | 3.18.0 |
| org.Hs.eg.db | 3.18.0 | org.Mm.eg.db | 3.18.0 |
| org.Rn.eg.db | 3.18.0 | org.Sc.sgd.db | 3.18.0 |
| Organism.dplyr | 1.30.1 | OrganismDbi | 1.44.0 |
| OrgMassSpecR | 0.5-3 | origami | 1.0.7 |
| orthogene | 1.8.0 | orthos | 1.0.1 |
| orthosData | 1.0.0 | OSAT | 1.50.0 |
| Oscope | 1.32.0 | osfr | 0.2.9 |
| osqp | 0.6.3.2 | OTUbase | 1.52.0 |
| outliers | 0.15 | OUTRIDER | 1.20.0 |
| OutSplice | 1.2.0 | OVESEG | 1.18.0 |
| PAA | 1.36.0 | packFinder | 1.14.0 |
| padma | 1.12.0 | PADOG | 1.44.0 |
| pageRank | 1.12.0 | paintmap | 1.0 |
| PAIRADISE | 1.18.0 | paircompviz | 1.40.0 |
| PairedData | 1.1.1 | pairedGSEA | 1.2.0 |
| pairkat | 1.8.0 | pairsD3 | 0.1.3 |
| palmerpenguins | 0.1.1 | pals | 1.8 |
| pamr | 1.56.1 | pan | 1.9 |
| pandaR | 1.34.0 | pander | 0.6.5 |
| panelcn.mops | 1.24.0 | PanomiR | 1.6.0 |
| panp | 1.72.0 | PANR | 1.48.0 |
| PanViz | 1.4.0 | paradox | 0.11.1 |
| parallelDist | 0.2.6 | ParallelLogger | 3.3.0 |
| parallelly | 1.37.1 | pareg | 1.6.0 |
| parglms | 1.34.0 | parmigene | 1.1.0 |
| parody | 1.60.0 | partCNV | 1.0.0 |
| partykit | 1.2-20 | pasilla | 1.30.0 |
| PAST | 1.18.0 | pastecs | 1.4.2 |
| patchwork | 1.2.0 | Path2PPI | 1.32.0 |
| pathifier | 1.40.0 | PathNet | 1.42.0 |
| PathoStat | 1.28.0 | pathRender | 1.70.0 |
| pathview | 1.42.0 | pathwayPCA | 1.18.0 |
| paws.common | 0.7.1 | paws.storage | 0.5.0 |
| paxtoolsr | 1.36.0 | pbapply | 1.7-2 |
| pbdZMQ | 0.3-11 | pbivnorm | 0.6.0 |
| pbkrtest | 0.5.2 | pbmcapply | 1.5.1 |
| pcaExplorer | 2.28.0 | pcalg | 2.7-11 |
| pcaMethods | 1.94.0 | PCAN | 1.30.0 |
| pcaPP | 2.0-4 | PCAtools | 2.14.0 |
| pcxn | 2.24.0 | pcxnData | 2.24.0 |
| pd.mapping50k.xba240 | 3.12.0 | PDATK | 1.10.0 |
| pdfCluster | 1.0-4 | pdftools | 3.4.0 |
| pdInfoBuilder | 1.66.0 | pdist | 1.2.1 |
| PeacoQC | 1.12.0 | peakPantheR | 1.16.1 |
| PECA | 1.38.0 | peco | 1.14.0 |
| penalized | 0.9-52 | pengls | 1.8.0 |
| PepsNMR | 1.20.0 | pepStat | 1.36.0 |
| Peptides | 2.4.6 | pepXMLTab | 1.36.0 |
| PerformanceAnalytics | 2.0.4 | periodicDNA | 1.12.0 |
| permute | 0.9-7 | PFAM.db | 3.18.0 |
| pfamAnalyzeR | 1.2.0 | pgca | 1.26.0 |
| phangorn | 2.11.1 | phantasus | 1.22.2 |
| phantasusLite | 1.0.0 | PharmacoGx | 3.6.0 |
| phastCons100way.UCSC.hg19 | 3.7.2 | phastCons100way.UCSC.hg38 | 3.7.1 |
| phateR | 1.0.7 | pheatmap | 1.0.12 |
| phemd | 1.18.0 | PhenoGeneRanker | 1.10.0 |
| phenomis | 1.4.0 | phenopath | 1.26.0 |
| phenoTest | 1.50.0 | PhenStat | 2.38.0 |
| philentropy | 0.8.0 | philr | 1.28.0 |
| PhIPData | 1.10.0 | phosphonormalizer | 1.26.0 |
| phosphoricons | 0.2.0 | PhosR | 1.12.0 |
| phyclust | 0.1-34 | phylobase | 0.8.12 |
| phylogram | 2.1.0 | phylolm | 2.6.2 |
| PhyloProfile | 1.16.3 | phyloseq | 1.46.0 |
| Pi | 2.14.0 | piano | 2.18.0 |
| pickgene | 1.74.0 | PICS | 2.46.0 |
| Pigengene | 1.28.0 | pillar | 1.9.0 |
| pinfsc50 | 1.3.0 | PING | 2.46.0 |
| pingr | 2.0.3 | pipeComp | 1.12.0 |
| pipeFrame | 1.18.0 | pixmap | 0.4-12 |
| pkgbuild | 1.4.4 | pkgconfig | 2.0.3 |
| pkgdown | 2.0.7 | pkgload | 1.3.4 |
| planet | 1.10.0 | planttfhunter | 1.2.0 |
| plasmut | 1.0.0 | plgem | 1.74.0 |
| plier | 1.72.0 | PloGO2 | 1.14.0 |
| plogr | 0.2.0 | plot3D | 1.4.1 |
| plot3Drgl | 1.0.4 | plotgardener | 1.8.2 |
| plotGrouper | 1.20.0 | plotly | 4.10.4 |
| plotmo | 3.6.3 | plotrix | 3.8-4 |
| plotROC | 2.3.1 | PLPE | 1.62.0 |
| pls | 2.8-3 | plsgenomics | 1.5-2.1 |
| plsVarSel | 0.9.10 | plyinteractions | 1.0.0 |
| plyr | 1.8.9 | plyranges | 1.22.0 |
| PMA | 1.2-3 | PMCMRplus | 1.9.10 |
| pmm | 1.34.0 | pmp | 1.14.1 |
| png | 0.1-8 | PoDCall | 1.10.1 |
| podkat | 1.34.0 | pogos | 1.22.0 |
| poibin | 1.5 | PoiClaClu | 1.0.2.1 |
| polspline | 1.1.24 | Polychrome | 1.5.1 |
| polyclip | 1.10-6 | polyester | 1.38.0 |
| polylabelr | 0.2.0 | polynom | 1.4-1 |
| PolynomF | 2.0-8 | PolyPhen.Hsapiens.dbSNP131 | 1.0.2 |
| POMA | 1.12.0 | poorman | 0.2.7 |
| posterior | 1.5.0 | poweRlaw | 0.80.0 |
| powerTCR | 1.22.0 | POWSC | 1.10.0 |
| ppclust | 1.1.0.1 | ppcor | 1.1 |
| ppcseq | 1.10.0 | PPInfer | 1.28.0 |
| pqsfinder | 2.18.0 | prabclus | 2.3-3 |
| pracma | 2.4.4 | praise | 1.0.0 |
| pram | 1.18.0 | praznik | 11.0.0 |
| prebs | 1.42.0 | preciseTAD | 1.12.0 |
| precrec | 0.14.4 | PREDA | 1.48.0 |
| preprocessCore | 1.64.0 | preseqR | 4.0.0 |
| prettydoc | 0.4.1 | prettyunits | 1.2.0 |
| primirTSS | 1.20.0 | PRIMME | 3.2-6 |
| PrInCE | 1.18.0 | princurve | 2.1.6 |
| proActiv | 1.12.0 | proBAMr | 1.36.0 |
| pROC | 1.18.5 | PROcess | 1.78.0 |
| processx | 3.8.4 | procoil | 2.30.0 |
| proDA | 1.16.0 | prodlim | 2023.08.28 |
| profileModel | 0.6.1 | profileplyr | 1.18.0 |
| profileScoreDist | 1.30.0 | profmem | 0.6.0 |
| profvis | 0.3.8 | progeny | 1.24.0 |
| progress | 1.2.3 | progressr | 0.14.0 |
| proj4 | 1.0-14 | projectR | 1.18.0 |
| pRoloc | 1.42.0 | pRolocdata | 1.40.0 |
| pRolocGUI | 2.12.0 | PROMISE | 1.54.0 |
| promises | 1.2.1 | PROPER | 1.34.0 |
| PROPS | 1.24.0 | Prostar | 1.34.6 |
| proteinProfiles | 1.42.0 | ProteoDisco | 1.8.0 |
| ProteoMM | 1.20.0 | protGear | 1.6.0 |
| ProtGenerics | 1.34.0 | proto | 1.0.0 |
| protolite | 2.3.0 | protr | 1.7-0 |
| protViz | 0.7.9 | proxy | 0.4-27 |
| proxyC | 0.3.4 | PRROC | 1.3.1 |
| pryr | 0.1.6 | ps | 1.7.6 |
| PSCBS | 0.67.0 | pscl | 1.5.9 |
| PSEA | 1.36.0 | psichomics | 1.28.1 |
| PSMatch | 1.6.0 | pspline | 1.0-19 |
| psych | 2.4.3 | psygenet2r | 1.34.1 |
| ptairMS | 1.10.0 | ptw | 1.9-16 |
| puma | 3.44.0 | PureCN | 2.8.1 |
| purrr | 1.0.2 | pvac | 1.50.0 |
| pvca | 1.42.0 | pvclust | 2.2-0 |
| Pviz | 1.36.0 | PWMEnrich | 4.38.0 |
| pwOmics | 1.34.0 | pwr | 1.3-0 |
| qap | 0.1-2 | qckitfastq | 1.18.0 |
| qcmetrics | 1.40.1 | qdapRegex | 0.7.8 |
| qdapTools | 1.3.7 | QDNAseq | 1.38.0 |
| QFeatures | 1.12.0 | qgraph | 1.9.8 |
| qlcMatrix | 0.9.7 | qmtools | 1.6.0 |
| qpcR | 1.4-1 | qpcrNorm | 1.60.0 |
| qpdf | 1.3.2 | qpgraph | 2.36.0 |
| qPLEXanalyzer | 1.20.0 | qqconf | 1.3.2 |
| qqman | 0.1.9 | qs | 0.26.1 |
| qsea | 1.28.0 | qsmooth | 1.18.0 |
| QSutils | 1.20.0 | qsvaR | 1.6.0 |
| qtl | 1.66 | QTLExperiment | 1.0.0 |
| Qtlizer | 1.16.0 | quadprog | 1.5-8 |
| qualV | 0.3-5 | quanteda | 3.3.1 |
| quantiseqr | 1.10.0 | quantmod | 0.4.26 |
| quantreg | 5.97 | quantro | 1.36.0 |
| quantsmooth | 1.68.0 | quarto | 1.4 |
| QuartPAC | 1.34.0 | QuasR | 1.42.1 |
| QuaternaryProd | 1.36.0 | QUBIC | 1.30.0 |
| questionr | 0.7.8 | QuickJSR | 1.1.3 |
| qusage | 2.36.0 | qvalue | 2.34.0 |
| qvcalc | 1.0.3 | R.cache | 0.16.0 |
| R.devices | 2.17.2 | R.filesets | 2.15.1 |
| R.huge | 0.10.1 | R.matlab | 3.7.0 |
| R.methodsS3 | 1.8.2 | R.oo | 1.26.0 |
| R.rsp | 0.46.0 | R.utils | 2.12.3 |
| R2HTML | 2.3.3 | R2jags | 0.7-1.1 |
| R2WinBUGS | 2.1-22.1 | R3CPET | 1.34.1 |
| r3Cseq | 1.48.0 | R453Plus1Toolbox | 1.52.0 |
| R4RNA | 1.30.0 | R6 | 2.5.1 |
| R6P | 0.3.0 | radiant.data | 1.6.3 |
| RadioGx | 2.6.0 | raer | 1.0.2 |
| rafalib | 1.0.0 | ragg | 1.3.0 |
| RaggedExperiment | 1.26.0 | RAIDS | 1.0.0 |
| rain | 1.36.0 | rainbow | 3.8 |
| ramr | 1.10.0 | ramwas | 1.26.0 |
| randomcoloR | 1.1.0.1 | randomForest | 4.7-1.1 |
| randomizr | 1.0.0 | RandomWalkRestartMH | 1.22.0 |
| randPack | 1.48.0 | randRotation | 1.14.0 |
| randtests | 1.0.1 | randtoolbox | 2.0.4 |
| ranger | 0.16.0 | RankAggreg | 0.6.6 |
| RankProd | 3.28.0 | RANN | 2.6.1 |
| rapiclient | 0.1.3 | rapidjsonr | 1.2.0 |
| RApiSerialize | 0.1.2 | rappdirs | 0.3.3 |
| rapportools | 1.1 | RAREsim | 1.6.0 |
| RareVariantVis | 2.30.0 | rARPACK | 0.11-0 |
| Rarr | 1.2.0 | raster | 3.6-26 |
| rawrr | 1.10.2 | RbcBook1 | 1.70.0 |
| Rbec | 1.10.0 | rBeta2009 | 1.0 |
| RBGL | 1.78.0 | rbibutils | 2.2.16 |
| RBioFormats | 1.2.0 | RBioinf | 1.62.0 |
| rBiopaxParser | 2.42.0 | RBM | 1.34.0 |
| rbokeh | 0.5.1 | Rbowtie | 1.42.0 |
| Rbowtie2 | 2.8.0 | rbsurv | 2.60.0 |
| Rbwa | 1.6.0 | RCAS | 1.28.3 |
| RCASPAR | 1.48.0 | rcdk | 3.8.1 |
| rcdklibs | 2.9 | rcellminer | 2.24.0 |
| rcellminerData | 2.24.0 | rCGH | 1.32.0 |
| RCircos | 1.2.2 | rclipboard | 0.2.1 |
| RCM | 1.18.0 | rcmdcheck | 1.4.0 |
| Rcollectl | 1.2.0 | RColorBrewer | 1.1-3 |
| Rcpi | 1.38.0 | Rcpp | 1.0.12 |
| RcppAlgos | 2.8.3 | RcppAnnoy | 0.0.22 |
| RcppArmadillo | 0.12.8.1.0 | RcppCCTZ | 0.2.12 |
| RcppDate | 0.0.3 | RcppDE | 0.1.7 |
| RcppDist | 0.1.1 | RcppEigen | 0.3.4.0.0 |
| RcppGSL | 0.3.13 | RcppHNSW | 0.6.0 |
| RcppInt64 | 0.0.4 | RcppML | 0.3.7 |
| RcppNumerical | 0.6-0 | RcppParallel | 5.1.7 |
| RcppProgress | 0.4.2 | RcppRoll | 0.3.0 |
| RcppSpdlog | 0.0.16 | RcppThread | 2.1.7 |
| RcppTOML | 0.2.2 | RcppZiggurat | 0.1.6 |
| RCurl | 1.98-1.14 | Rcwl | 1.18.0 |
| RcwlPipelines | 1.18.1 | RCX | 1.6.0 |
| RCy3 | 2.22.1 | RCyjs | 2.24.0 |
| rDGIdb | 1.28.0 | Rdisop | 1.62.0 |
| rdist | 0.0.5 | Rdpack | 2.6 |
| RDRToolbox | 1.52.0 | reactable | 0.4.4 |
| reactome.db | 1.86.2 | ReactomeContentService4R | 1.10.0 |
| ReactomeGraph4R | 1.10.0 | ReactomeGSA | 1.16.1 |
| ReactomePA | 1.46.0 | reactR | 0.5.0 |
| readbitmap | 0.1.5 | reader | 1.0.6 |
| readJDX | 0.6.4 | ReadqPCR | 1.48.0 |
| readr | 2.1.5 | readxl | 1.4.3 |
| REBET | 1.20.0 | rebook | 1.12.0 |
| rebus | 0.1-3 | rebus.base | 0.0-3 |
| rebus.datetimes | 0.0-2 | rebus.numbers | 0.0-1 |
| rebus.unicode | 0.0-2 | receptLoss | 1.14.0 |
| recipes | 1.0.10 | reconsi | 1.14.0 |
| RecordLinkage | 0.4-12.4 | recount | 1.28.0 |
| recount3 | 1.12.0 | recountmethylation | 1.12.0 |
| recoup | 1.30.0 | RedeR | 2.6.1 |
| RedisParam | 1.4.0 | redux | 1.1.4 |
| RefManageR | 1.4.0 | regionalpcs | 1.0.0 |
| RegionalST | 1.0.1 | regioneR | 1.34.0 |
| regioneReloaded | 1.4.0 | regionReport | 1.36.0 |
| registry | 0.5-1 | regsplice | 1.28.1 |
| regutools | 1.14.0 | relations | 0.6-13 |
| reldist | 1.7-2 | relimp | 1.0-5 |
| remaCor | 0.0.18 | rematch | 2.0.0 |
| rematch2 | 2.1.2 | remotes | 2.5.0 |
| REMP | 1.26.0 | rentrez | 1.2.3 |
| renv | 1.0.5 | Repitools | 1.48.0 |
| repmis | 0.5 | repo | 2.1.5 |
| ReportingTools | 2.42.3 | reportr | 1.3.0 |
| reportROC | 3.6 | repr | 1.1.6 |
| reprex | 2.1.0 | RepViz | 1.18.0 |
| ReQON | 1.48.0 | reshape | 0.8.9 |
| reshape2 | 1.4.4 | ResidualMatrix | 1.12.0 |
| RESOLVE | 1.4.0 | restfulr | 0.0.15 |
| restfulSE | 1.24.0 | reticulate | 1.35.0 |
| retrofit | 1.2.0 | ReUseData | 1.2.2 |
| rex | 1.2.1 | rexposome | 1.24.1 |
| rfaRm | 1.14.2 | Rfast | 2.1.0 |
| Rfastp | 1.12.0 | rfPred | 1.40.0 |
| rGADEM | 2.50.0 | rGenomeTracks | 1.8.0 |
| rGenomeTracksData | 0.99.0 | rgl | 1.3.1 |
| RGMQL | 1.22.1 | RGMQLlib | 1.22.0 |
| RgnTX | 1.4.0 | rgoslin | 1.6.0 |
| RGraph2js | 1.30.0 | Rgraphviz | 2.46.0 |
| rGREAT | 2.4.0 | RGSEA | 1.36.0 |
| rgsepd | 1.34.0 | rhandsontable | 0.3.8 |
| rhdf5 | 2.46.1 | rhdf5client | 1.24.0 |
| rhdf5filters | 1.14.1 | Rhdf5lib | 1.24.2 |
| Rhisat2 | 1.18.0 | RhpcBLASctl | 0.23-42 |
| Rhtslib | 2.4.1 | RiboCrypt | 1.8.0 |
| RiboDiPA | 1.10.0 | RiboProfiling | 1.32.0 |
| ribor | 1.14.0 | riboSeqR | 1.36.0 |
| ribosomeProfilingQC | 1.14.1 | ridge | 3.3 |
| rifi | 1.6.0 | rifiComparative | 1.2.0 |
| RImmPort | 1.30.0 | Ringo | 1.66.0 |
| rintrojs | 0.3.4 | rio | 1.0.1 |
| Risa | 1.44.0 | RISmed | 2.3.0 |
| RITAN | 1.26.0 | RITANdata | 1.26.0 |
| RIVER | 1.26.0 | rjags | 4-15 |
| rJava | 1.0-11 | RJMCMCNucleosomes | 1.26.0 |
| rjson | 0.2.21 | rjsoncons | 1.2.0 |
| RJSONIO | 1.3-1.9 | Rlab | 4.0 |
| Rlabkey | 3.2.0 | rlang | 1.1.3 |
| RLassoCox | 1.10.0 | RLHub | 0.99.5 |
| rlist | 0.4.6.2 | RLMM | 1.64.0 |
| RLSeq | 1.5.2 | Rmagpie | 1.58.0 |
| RMallow | 1.1 | RMariaDB | 1.3.1 |
| rmarkdown | 2.26 | RMassBank | 3.12.0 |
| rmdformats | 1.0.4 | rmelting | 1.18.0 |
| rmeta | 3.0 | rmio | 0.4.0 |
| Rmisc | 1.5.1 | Rmixmod | 2.1.10 |
| Rmmquant | 1.20.0 | Rmpfr | 0.9-5 |
| Rmpi | 0.7-2 | rms | 6.8-0 |
| RMSNumpress | 1.0.1 | rmspc | 1.8.0 |
| RMTstat | 0.3.1 | rmutil | 1.1.10 |
| RMySQL | 0.10.27 | rmzqc | 0.5.3 |
| RNAAgeCalc | 1.14.0 | RNAdecay | 1.22.2 |
| rnaEditr | 1.12.0 | RNAinteract | 1.50.0 |
| RNAmodR | 1.16.0 | RNAmodR.AlkAnilineSeq | 1.16.0 |
| RNAmodR.ML | 1.16.0 | RNAmodR.RiboMethSeq | 1.16.0 |
| RNAsense | 1.16.0 | rnaseqcomp | 1.32.0 |
| RNAseqCovarImpute | 1.0.2 | RNASeqPower | 1.42.0 |
| RnaSeqSampleSize | 2.12.0 | RnaSeqSampleSizeData | 1.34.0 |
| RnBeads | 2.20.0 | RnBeads.hg19 | 1.34.0 |
| rncl | 0.8.7 | RNeXML | 2.4.11 |
| rngtools | 1.5.2 | rngWELL | 0.10-9 |
| RNifti | 1.6.1 | Rnits | 1.36.0 |
| RNOmni | 1.0.1.2 | roar | 1.38.0 |
| roastgsa | 1.0.0 | robust | 0.7-4 |
| robustbase | 0.99-2 | RobustRankAggreg | 1.2.1 |
| ROC | 1.78.0 | ROCit | 2.1.1 |
| ROCpAI | 1.14.0 | ROCR | 1.0-11 |
| RolDE | 1.6.0 | rols | 2.30.2 |
| ROntoTools | 2.30.0 | Rook | 1.2 |
| rootSolve | 1.8.2.4 | ropls | 1.34.0 |
| roptim | 0.1.6 | rorcid | 0.7.0 |
| ROSeq | 1.14.0 | ROTS | 1.30.0 |
| roxygen2 | 7.3.1 | RPA | 1.58.0 |
| rpart.plot | 3.1.2 | RPMM | 1.25 |
| rprimer | 1.6.0 | rprojroot | 2.0.4 |
| RProtoBufLib | 2.14.1 | rpx | 2.10.0 |
| Rqc | 1.36.0 | rqt | 1.28.0 |
| rqubic | 1.48.0 | rrcov | 1.7-5 |
| rRDP | 1.36.0 | RRHO | 1.42.0 |
| rrvgo | 1.14.2 | rsample | 1.2.0 |
| Rsamtools | 2.18.0 | rsbml | 2.60.0 |
| rScudo | 1.18.1 | rsemmed | 1.12.0 |
| RSeqAn | 1.22.0 | rslurm | 0.6.2 |
| rsm | 2.10.4 | RSNNS | 0.4-17 |
| Rsolnp | 1.16 | rsparse | 0.5.1 |
| RSpectra | 0.16-1 | rSpectral | 1.0.0.10 |
| rsq | 2.6 | RSQLite | 2.3.5 |
| rstan | 2.32.6 | rstantools | 2.4.0 |
| rstatix | 0.7.2 | rstudioapi | 0.15.0 |
| Rsubread | 2.16.1 | rsvd | 1.0.5 |
| rsvg | 2.6.0 | RSVSim | 1.42.0 |
| rSWeeP | 1.14.0 | RTCA | 1.54.0 |
| RTCGA | 1.32.0 | RTCGAToolbox | 2.32.1 |
| rTensor | 1.4.8 | RTN | 2.26.0 |
| RTNduals | 1.26.0 | RTNsurvival | 1.26.0 |
| RTopper | 1.48.0 | Rtpca | 1.12.0 |
| rtracklayer | 1.62.0 | Rtreemix | 1.64.0 |
| RTriangle | 1.6-0.13 | rTRM | 1.40.0 |
| rTRMui | 1.40.0 | Rtsne | 0.17 |
| Rttf2pt1 | 1.3.12 | runibic | 1.24.0 |
| RUnit | 0.4.33 | ruv | 0.9.7.1 |
| RUVcorr | 1.34.0 | RUVnormalize | 1.36.0 |
| RUVnormalizeData | 1.22.0 | RUVSeq | 1.36.0 |
| rversions | 2.1.2 | rvest | 1.0.4 |
| rvinecopulib | 0.6.3.1.1 | Rvisdiff | 1.0.0 |
| RVS | 1.24.0 | RWeka | 0.4-46 |
| RWekajars | 3.9.3-2 | rWikiPathways | 1.22.1 |
| s2 | 1.1.6 | S4Arrays | 1.2.1 |
| S4Vectors | 0.40.2 | safe | 3.42.0 |
| safetensors | 0.1.2 | sagenhaft | 1.72.0 |
| SAIGEgds | 2.2.1 | sampleClassifier | 1.26.0 |
| sampling | 2.10 | SamSPECTRAL | 1.56.0 |
| sandwich | 3.1-0 | sangeranalyseR | 1.12.0 |
| sangerseqR | 1.38.0 | SANTA | 2.38.0 |
| SARC | 1.0.0 | sarks | 1.14.0 |
| sass | 0.4.9 | satuRn | 1.10.0 |
| SAVER | 1.1.2 | SBGNview | 1.16.0 |
| SBGNview.data | 1.16.0 | SBMLR | 1.98.0 |
| SC3 | 1.30.0 | Scale4C | 1.24.0 |
| ScaledMatrix | 1.10.0 | scales | 1.3.0 |
| scam | 1.2-16 | SCAN.UPC | 2.44.0 |
| scanMiR | 1.8.2 | scanMiRApp | 1.8.0 |
| scanMiRData | 1.8.0 | scAnnotatR | 1.8.0 |
| SCANVIS | 1.16.0 | SCArray | 1.10.0 |
| SCArray.sat | 1.2.1 | scater | 1.30.1 |
| scatterHatch | 1.8.0 | scattermore | 1.2 |
| scatterpie | 0.2.1 | scatterplot3d | 0.3-44 |
| scBFA | 1.16.0 | SCBN | 1.20.0 |
| scBubbletree | 1.4.0 | scCB2 | 1.12.0 |
| scClassify | 1.14.0 | sccomp | 1.6.0 |
| scDataviz | 1.12.0 | scDblFinder | 1.16.0 |
| scDD | 1.26.0 | scDDboost | 1.4.0 |
| scde | 2.30.0 | scDesign3 | 1.0.1 |
| scds | 1.18.0 | SCFA | 1.12.0 |
| scFeatureFilter | 1.22.0 | scFeatures | 1.3.2 |
| scGPS | 1.16.0 | schex | 1.16.1 |
| scHOT | 1.14.0 | scico | 1.5.0 |
| scider | 1.0.0 | scifer | 1.4.0 |
| scmap | 1.24.0 | scMerge | 1.18.0 |
| scMET | 1.4.0 | scmeth | 1.22.0 |
| SCnorm | 1.24.0 | scone | 1.26.0 |
| Sconify | 1.22.0 | SCOPE | 1.14.0 |
| scoreInvHap | 1.24.0 | scp | 1.12.0 |
| scPCA | 1.16.0 | scPipe | 2.2.0 |
| scran | 1.30.2 | scReClassify | 1.8.0 |
| scRecover | 1.18.0 | screenCounter | 1.2.0 |
| ScreenR | 1.4.0 | scRepertoire | 1.12.0 |
| scrime | 1.3.5 | scRNAseq | 2.16.0 |
| scRNAseqApp | 1.2.2 | scruff | 1.20.0 |
| scry | 1.14.0 | scrypt | 0.1.6 |
| scs | 3.2.4 | scShapes | 1.8.0 |
| scTensor | 2.12.0 | scTGIF | 1.16.0 |
| scTHI | 1.14.0 | sctransform | 0.4.1 |
| scTreeViz | 1.8.0 | scuttle | 1.12.0 |
| scviR | 1.2.0 | SDAMS | 1.22.0 |
| sechm | 1.10.0 | segmented | 2.0-3 |
| segmenter | 1.8.0 | segmentSeq | 2.36.0 |
| selectKSigs | 1.14.0 | selectr | 0.4-2 |
| SELEX | 1.34.0 | SemDist | 1.36.0 |
| semisup | 1.26.0 | sendmailR | 1.4-0 |
| seq.hotSPOT | 1.2.0 | seq2pathway | 1.34.0 |
| seq2pathway.data | 1.34.0 | seqArchR | 1.6.0 |
| seqArchRplus | 1.2.0 | SeqArray | 1.42.2 |
| seqbias | 1.50.0 | seqCAT | 1.24.0 |
| seqCNA | 1.48.0 | seqCNA.annot | 1.38.0 |
| seqcombo | 1.24.0 | SeqGate | 1.12.0 |
| SeqGSEA | 1.42.0 | seqinr | 4.2-36 |
| seqLogo | 1.68.0 | seqmagick | 0.1.7 |
| seqminer | 9.4 | seqPattern | 1.34.0 |
| seqsetvis | 1.22.1 | SeqSQC | 1.24.0 |
| seqTools | 1.36.0 | SeqVarTools | 1.40.0 |
| seriation | 1.5.4 | servr | 0.29 |
| sesame | 1.20.0 | sesameData | 1.20.0 |
| sessioninfo | 1.2.2 | SEtools | 1.16.0 |
| setRNG | 2024.2-1 | sets | 1.0-25 |
| settings | 0.2.7 | Seurat | 5.0.3 |
| SeuratObject | 5.0.1 | sevenbridges | 1.32.0 |
| sevenC | 1.22.0 | sf | 1.0-15 |
| sfsmisc | 1.1-17 | sftime | 0.2-0 |
| SGCP | 1.2.0 | sgeostat | 1.0-27 |
| SGSeq | 1.36.0 | shades | 1.4.0 |
| shadowtext | 0.1.3 | shape | 1.4.6.1 |
| SharedObject | 1.16.0 | shiny | 1.8.0 |
| shinyAce | 0.4.2 | shinyalert | 3.0.0 |
| shinyBS | 0.61.1 | shinybusy | 0.3.3 |
| shinycssloaders | 1.0.0 | shinycustomloader | 0.9.0 |
| shinyCyJS | 1.0.0 | shinydashboard | 0.7.2 |
| shinydashboardPlus | 2.0.3 | shinyepico | 1.10.0 |
| shinyFeedback | 0.4.0 | shinyFiles | 0.9.3 |
| shinyHeatmaply | 0.2.0 | shinyhelper | 0.3.2 |
| shinyjqui | 0.4.1 | shinyjs | 2.1.0 |
| shinylogs | 0.2.1 | shinymanager | 1.0.410 |
| shinyMatrix | 0.6.0 | shinymeta | 0.2.0.3 |
| shinyMethyl | 1.38.0 | shinypanel | 0.1.5 |
| shinyscreenshot | 0.2.1 | shinythemes | 1.2.0 |
| shinytitle | 0.1.0 | shinytoastr | 2.2.0 |
| shinyTree | 0.3.1 | shinyvalidate | 0.1.3 |
| shinyWidgets | 0.8.2 | ShortRead | 1.60.0 |
| SIAMCAT | 2.6.0 | SICtools | 1.32.0 |
| SIFT.Hsapiens.dbSNP137 | 1.0.0 | SigCheck | 2.34.0 |
| sigclust | 1.1.0.1 | sigFeature | 1.20.0 |
| SigFuge | 1.40.0 | siggenes | 1.76.0 |
| sights | 1.28.0 | signal | 1.8-0 |
| signatureSearch | 1.16.0 | signeR | 2.4.0 |
| signifinder | 1.4.0 | SigsPack | 1.16.0 |
| sigsquared | 1.34.0 | SIM | 1.72.0 |
| SIMAT | 1.34.0 | SimBindProfiles | 1.40.0 |
| SimBu | 1.4.3 | SIMD | 1.20.0 |
| SimFFPE | 1.14.0 | similaRpeak | 1.34.0 |
| SIMLR | 1.28.0 | simona | 1.0.10 |
| simpIntLists | 1.38.0 | simpleCache | 0.4.2 |
| simpleSeg | 1.4.1 | simplifyEnrichment | 1.12.0 |
| sincell | 1.34.0 | single | 1.6.0 |
| SingleCellExperiment | 1.24.0 | SingleCellSignalR | 1.14.0 |
| singleCellTK | 2.12.2 | SingleMoleculeFootprinting | 1.10.0 |
| SingleR | 2.4.1 | singscore | 1.22.0 |
| SiPSiC | 1.2.2 | sitadela | 1.10.0 |
| sitePath | 1.18.0 | sitmo | 2.0.2 |
| sizepower | 1.72.0 | sjlabelled | 1.2.0 |
| sjmisc | 2.8.9 | skewr | 1.34.0 |
| skmeans | 0.2-16 | slalom | 1.24.0 |
| slam | 0.1-50 | slider | 0.3.1 |
| slingshot | 2.10.0 | SLqPCR | 1.68.0 |
| sm | 2.2-6.0 | SMAD | 1.18.0 |
| SMAP | 1.66.0 | SmartSVA | 0.1.3 |
| smatr | 3.4-8 | SMITE | 1.30.0 |
| smoother | 1.1 | smoothie | 1.0-3 |
| SmoothWin | 3.0.0 | smurf | 1.1.5 |
| SMVar | 1.3.4 | sn | 2.1.1 |
| sna | 2.7-2 | SNAGEE | 1.42.0 |
| SNAGEEdata | 1.38.0 | snakecase | 0.11.1 |
| snapCGH | 1.72.0 | snapcount | 1.14.0 |
| snifter | 1.12.0 | snm | 1.50.0 |
| snow | 0.4-4 | SnowballC | 0.7.1 |
| snowfall | 1.84-6.3 | SNPediaR | 1.28.0 |
| SNPhood | 1.32.0 | SNPlocs.Hsapiens.dbSNP144.GRCh37 | 0.99.20 |
| SNPRelate | 1.36.1 | snpStats | 1.52.0 |
| softImpute | 1.4-1 | soGGi | 1.34.0 |
| som | 0.3-5.1 | SomaticSignatures | 2.38.0 |
| SOMNiBUS | 1.10.0 | sonicLength | 1.4.7 |
| sortable | 0.5.0 | SoupX | 1.6.2 |
| sourcetools | 0.1.7-1 | sp | 2.1-3 |
| SpacePAC | 1.40.0 | spacetime | 1.3-1 |
| spam | 2.10-0 | Spaniel | 1.16.0 |
| sparklyr | 1.8.4 | sparrow | 1.8.0 |
| SparseArray | 1.2.4 | SparseM | 1.81 |
| sparseMatrixStats | 1.14.0 | sparseMVN | 0.2.2 |
| sparsenetgls | 1.20.0 | sparsepca | 0.1.2 |
| SparseSignatures | 2.12.0 | sparsesvd | 0.2-2 |
| spaSim | 1.4.0 | SpatialCPie | 1.18.0 |
| spatialDE | 1.8.1 | SpatialDecon | 1.12.3 |
| SpatialExperiment | 1.12.0 | SpatialExtremes | 2.1-0 |
| SpatialFeatureExperiment | 1.4.0 | spatialHeatmap | 2.8.5 |
| SpatialOmicsOverlay | 1.2.1 | SpatialTools | 1.0.5 |
| spatstat | 3.0-7 | spatstat.data | 3.0-4 |
| spatstat.explore | 3.2-6 | spatstat.geom | 3.2-9 |
| spatstat.linnet | 3.1-4 | spatstat.model | 3.2-10 |
| spatstat.random | 3.2-3 | spatstat.sparse | 3.0-3 |
| spatstat.utils | 3.0-4 | spatzie | 1.8.0 |
| spBayes | 0.4-7 | spData | 2.3.0 |
| spdep | 1.3-3 | spdl | 0.0.5 |
| speaq | 2.7.0 | speckle | 1.2.0 |
| specL | 1.36.0 | SpeCond | 1.56.0 |
| Spectra | 1.12.0 | SpectralTAD | 1.18.0 |
| speedglm | 0.3-5 | SPEM | 1.42.0 |
| SPIA | 2.54.0 | SPIAT | 1.4.2 |
| spicyR | 1.14.3 | SpidermiR | 1.32.0 |
| spikeLI | 2.62.0 | spiky | 1.8.0 |
| spkTools | 1.58.0 | splancs | 2.01-44 |
| splatter | 1.26.0 | SpliceWiz | 1.4.1 |
| SplicingFactory | 1.10.0 | SplicingGraphs | 1.42.0 |
| splineTimeR | 1.30.0 | SPLINTER | 1.28.0 |
| splitstackshape | 1.4.8 | splots | 1.68.0 |
| splus2R | 1.3-5 | SpotClean | 1.4.1 |
| SPOTlight | 1.6.7 | spqn | 1.14.0 |
| spsComps | 0.3.3.0 | SPsimSeq | 1.12.0 |
| spsUtil | 0.2.2 | SQLDataFrame | 1.16.1 |
| sqldf | 0.4-11 | SQUADD | 1.52.0 |
| SQUAREM | 2021.1 | squash | 1.0.9 |
| sRACIPE | 1.18.0 | SRAdb | 1.64.0 |
| srnadiff | 1.22.2 | ssc | 2.1-0 |
| sscu | 2.32.0 | sSeq | 1.40.0 |
| ssize | 1.76.0 | sSNAPPY | 1.6.1 |
| ssPATHS | 1.16.0 | ssrch | 1.18.0 |
| ssviz | 1.36.0 | stable | 1.1.6 |
| stabledist | 0.7-1 | stabs | 0.6-4 |
| stageR | 1.24.0 | standR | 1.6.0 |
| StanHeaders | 2.32.6 | staRank | 1.44.0 |
| StarBioTrek | 1.28.0 | stars | 0.6-4 |
| startupmsg | 0.9.6.1 | statebins | 1.4.0 |
| STATegRa | 1.38.0 | Statial | 1.4.5 |
| statip | 0.2.3 | statmod | 1.5.0 |
| statnet.common | 4.9.0 | statTarget | 1.32.0 |
| STdeconvolve | 1.6.0 | stemHypoxia | 1.38.0 |
| stepNorm | 1.74.0 | stJoincount | 1.4.0 |
| stopwords | 2.3 | storr | 1.2.5 |
| strandCheckR | 1.20.0 | strawr | 0.0.91 |
| Streamer | 1.48.0 | strex | 2.0.0 |
| STRINGdb | 2.14.3 | stringdist | 0.9.12 |
| stringfish | 0.16.0 | stringi | 1.8.3 |
| stringr | 1.5.1 | strucchange | 1.5-3 |
| struct | 1.14.1 | Structstrings | 1.18.0 |
| structToolbox | 1.14.0 | StructuralVariantAnnotation | 1.18.0 |
| styler | 1.10.2 | SubCellBarCode | 1.18.0 |
| subSeq | 1.32.0 | SUITOR | 1.4.0 |
| SummarizedBenchmark | 2.20.0 | SummarizedExperiment | 1.32.0 |
| summarytools | 1.0.1 | Summix | 2.8.0 |
| superheat | 0.1.0 | SuperLearner | 2.0-29 |
| supersigs | 1.10.0 | SuppDists | 1.1-9.7 |
| supraHex | 1.40.0 | surfaltr | 1.8.0 |
| survcomp | 1.52.0 | survey | 4.4-1 |
| survivalAnalysis | 0.3.0 | survivalROC | 1.0.3.1 |
| survivalsvm | 0.0.5 | survminer | 0.4.9 |
| survMisc | 0.5.6 | survtype | 1.18.0 |
| sva | 3.50.0 | svaNUMT | 1.8.0 |
| svaRetro | 1.8.0 | svd | 0.5.5 |
| svglite | 2.1.3 | svgPanZoom | 0.3.4 |
| SVMDO | 1.2.8 | svMisc | 1.2.3 |
| svUnit | 1.0.6 | swamp | 1.5.1 |
| SWATH2stats | 1.32.1 | SwathXtend | 2.24.0 |
| swfdr | 1.28.0 | switchBox | 1.38.0 |
| switchde | 1.28.0 | sylly | 0.1-6 |
| sylly.en | 0.1-3 | synapsis | 1.8.0 |
| synapter | 2.26.0 | synergyfinder | 3.10.3 |
| SynExtend | 1.14.0 | synlet | 2.2.0 |
| SynMut | 1.18.0 | syntenet | 1.4.0 |
| sys | 3.4.2 | systemfonts | 1.0.6 |
| systemPipeR | 2.8.0 | systemPipeShiny | 1.12.0 |
| systemPipeTools | 1.10.0 | syuzhet | 1.0.7 |
| tadar | 1.0.0 | TADCompare | 1.12.1 |
| tagcloud | 0.6 | tanggle | 1.8.0 |
| TAPseq | 1.14.1 | target | 1.16.0 |
| TargetDecoy | 1.8.0 | TargetScore | 1.40.0 |
| TargetSearch | 2.4.2 | TBSignatureProfiler | 1.14.0 |
| TBX20BamSubset | 1.38.0 | TCA | 1.2.1 |
| TCC | 1.42.0 | TCGAbiolinks | 2.30.0 |
| TCGAbiolinksGUI.data | 1.22.0 | TCGAutils | 1.22.2 |
| tcltk2 | 1.2-11 | TCseq | 1.26.0 |
| TDbasedUFE | 1.2.0 | TDbasedUFEadv | 1.2.0 |
| TeachingDemos | 2.13 | TEKRABber | 1.6.0 |
| tensor | 1.5 | tensorA | 0.36.2.1 |
| tensorflow | 2.15.0 | TENxIO | 1.4.0 |
| TENxPBMCData | 1.20.0 | tenXplore | 1.24.0 |
| TEQC | 4.24.0 | ternarynet | 1.46.0 |
| terra | 1.7-71 | terraTCGAdata | 1.6.0 |
| tester | 0.1.7 | testthat | 3.2.1 |
| text2vec | 0.6.4 | textclean | 0.9.3 |
| textshape | 1.7.3 | textshaping | 0.3.7 |
| textstem | 0.1.4 | TFARM | 1.24.0 |
| tfautograph | 0.3.2 | TFBSTools | 1.40.0 |
| TFEA.ChIP | 1.22.0 | TFHAZ | 1.24.0 |
| TFisher | 0.2.0 | TFMPvalue | 0.0.9 |
| tfprobability | 0.15.1 | tfruns | 1.5.2 |
| TFutils | 1.22.0 | TH.data | 1.1-2 |
| threejs | 0.3.3 | tibble | 3.2.1 |
| tictoc | 1.2.1 | tidybayes | 3.0.6 |
| tidybulk | 1.14.3 | tidydr | 0.0.5 |
| tidygraph | 1.3.1 | tidyHeatmap | 1.8.1 |
| tidyr | 1.3.1 | tidyselect | 1.2.1 |
| tidySingleCellExperiment | 1.12.0 | tidySummarizedExperiment | 1.12.0 |
| tidytext | 0.4.1 | tidytidbits | 0.3.2 |
| tidytree | 0.4.6 | tidyverse | 2.0.0 |
| tiff | 0.1-12 | tigre | 1.56.0 |
| tiledb | 0.24.0 | TileDBArray | 1.12.0 |
| tilingArray | 1.80.0 | timechange | 0.3.0 |
| timecourse | 1.74.0 | timeDate | 4032.109 |
| timeOmics | 1.14.0 | timescape | 1.26.0 |
| timeSeries | 4032.109 | TimiRGeN | 1.11.0 |
| timsac | 1.3.8-4 | TIN | 1.34.0 |
| tinytex | 0.50 | tippy | 0.1.0 |
| TissueEnrich | 1.22.0 | TitanCNA | 1.40.0 |
| tkrplot | 0.0-27 | tkWidgets | 1.80.0 |
| tLOH | 1.10.0 | tm | 0.7-12 |
| TMB | 1.9.10 | TMixClust | 1.24.0 |
| tmvtnorm | 1.6 | TNBC.CMS | 1.18.0 |
| TnT | 1.24.0 | TOAST | 1.16.0 |
| tokenizers | 0.3.0 | tomoda | 1.12.0 |
| tomoseqr | 1.6.0 | TOP | 1.2.0 |
| topconfects | 1.18.0 | topdownr | 1.24.0 |
| topGO | 2.54.0 | topicmodels | 0.2-16 |
| torch | 0.12.0 | ToxicoGx | 2.6.0 |
| TPP | 3.30.0 | TPP2D | 1.18.0 |
| tracktables | 1.36.0 | trackViewer | 1.38.2 |
| tractor.base | 3.4.2 | tradeSeq | 1.16.0 |
| TrajectoryGeometry | 1.10.1 | TrajectoryUtils | 1.10.1 |
| transcriptogramer | 1.24.0 | transcriptR | 1.30.0 |
| transformGamPoi | 1.8.0 | transformr | 0.1.5 |
| transite | 1.20.1 | tRanslatome | 1.40.0 |
| transomics2cytoscape | 1.12.0 | transport | 0.14-7 |
| TransView | 1.46.0 | traseR | 1.32.0 |
| traviz | 1.8.0 | TreeAndLeaf | 1.14.0 |
| treeio | 1.26.0 | treekoR | 1.10.0 |
| treemap | 2.4-4 | TreeSummarizedExperiment | 2.10.0 |
| TREG | 1.6.0 | Trendy | 1.24.1 |
| TRESS | 1.8.0 | tricycle | 1.10.0 |
| triebeard | 0.4.1 | trigger | 1.48.0 |
| trio | 3.40.0 | triplex | 1.42.0 |
| tripr | 1.8.0 | tRNA | 1.20.1 |
| tRNAdbImport | 1.20.1 | tRNAscanImport | 1.22.0 |
| TRONCO | 2.34.0 | truncdist | 1.0-2 |
| truncnorm | 1.0-9 | trust | 0.1-8 |
| TSCAN | 1.40.1 | tseries | 0.10-55 |
| tsne | 0.1-3.1 | TSP | 1.2-4 |
| ttgsea | 1.10.0 | TTMap | 1.24.0 |
| TTR | 0.24.4 | ttservice | 0.4.0 |
| TurboNorm | 1.50.0 | TVTB | 1.28.0 |
| tweeDEseq | 1.48.0 | tweedie | 2.3.5 |
| tweenr | 2.0.3 | twilight | 1.78.0 |
| twoddpcr | 1.26.0 | txcutr | 1.8.0 |
| TxDb.Celegans.UCSC.ce6.ensGene | 3.2.2 | TxDb.Dmelanogaster.UCSC.dm3.ensGene | 3.2.2 |
| TxDb.Dmelanogaster.UCSC.dm6.ensGene | 3.12.0 | TxDb.Hsapiens.UCSC.hg18.knownGene | 3.2.2 |
| TxDb.Hsapiens.UCSC.hg19.knownGene | 3.2.2 | TxDb.Hsapiens.UCSC.hg38.knownGene | 3.18.0 |
| TxDb.Mmusculus.UCSC.mm10.knownGene | 3.10.0 | TxDb.Mmusculus.UCSC.mm9.knownGene | 3.2.2 |
| TxDb.Rnorvegicus.UCSC.rn4.ensGene | 3.2.2 | tximeta | 1.20.3 |
| tximport | 1.30.0 | tximportData | 1.30.0 |
| TypeInfo | 1.68.0 | tzdb | 0.4.0 |
| UCell | 2.6.2 | ucminf | 1.2.1 |
| Ularcirc | 1.20.0 | umap | 0.2.10.0 |
| UMI4Cats | 1.12.0 | uncoverappLib | 1.12.0 |
| UNDO | 1.44.0 | unifiedWMWqPCR | 1.38.0 |
| UniProt.ws | 2.42.0 | uniqtag | 1.0.1 |
| Uniquorn | 2.22.0 | units | 0.8-5 |
| universalmotif | 1.20.0 | unmarked | 1.4.1 |
| updateObject | 1.6.0 | UpSetR | 1.4.0 |
| urca | 1.3-3 | urlchecker | 1.0.1 |
| urltools | 1.7.3 | usethis | 2.2.3 |
| uSORT | 1.28.0 | utf8 | 1.2.4 |
| uuid | 1.2-0 | uwot | 0.1.16 |
| V8 | 4.4.2 | VAExprs | 1.8.0 |
| valr | 0.7.0 | VAM | 1.1.0 |
| VanillaICE | 1.64.1 | VarCon | 1.10.0 |
| VarfromPDB | 2.2.10 | varhandle | 2.0.6 |
| variancePartition | 1.32.5 | VariantAnnotation | 1.48.1 |
| VariantExperiment | 1.16.0 | VariantFiltering | 1.38.0 |
| VariantTools | 1.44.0 | varSelRF | 0.7-8 |
| VaSP | 1.14.0 | vbmp | 1.70.0 |
| vcd | 1.4-12 | VCFArray | 1.18.0 |
| vcfR | 1.15.0 | vctrs | 0.6.5 |
| VDJdive | 1.4.0 | VegaMC | 3.40.0 |
| vegan | 2.6-4 | velociraptor | 1.12.0 |
| veloviz | 1.8.0 | venn | 1.12 |
| VennDetail | 1.18.0 | VennDiagram | 1.7.3 |
| verification | 1.42 | VERSO | 1.12.0 |
| VGAM | 1.1-10 | vidger | 1.22.0 |
| VIM | 6.2.2 | vioplot | 0.4.0 |
| viper | 1.36.0 | vipor | 0.4.7 |
| viridis | 0.6.5 | viridisLite | 0.4.2 |
| visdat | 0.6.0 | ViSEAGO | 1.16.0 |
| visNetwork | 2.1.2 | vissE | 1.10.0 |
| Voyager | 1.4.0 | VplotR | 1.12.1 |
| vroom | 1.6.5 | vsclust | 1.4.0 |
| vsn | 3.70.0 | vtpnet | 0.42.0 |
| vulcan | 1.24.0 | waddR | 1.16.0 |
| waffle | 1.0.2 | waiter | 0.2.5 |
| waldo | 0.5.2 | warp | 0.2.1 |
| wateRmelon | 2.8.0 | wavClusteR | 2.36.0 |
| waveslim | 1.8.4 | wavethresh | 4.7.2 |
| wdm | 0.2.4 | weaver | 1.68.0 |
| webbioc | 1.74.0 | webchem | 1.3.0 |
| webshot | 0.5.5 | webutils | 1.2.0 |
| weitrix | 1.14.0 | wesanderson | 0.3.7 |
| WGCNA | 1.72-5 | wheatmap | 0.2.0 |
| whisker | 0.4.1 | widgetTools | 1.80.0 |
| wiggleplotr | 1.26.0 | withr | 3.0.0 |
| wk | 0.9.1 | word2vec | 0.4.0 |
| wordcloud | 2.6 | wordcloud2 | 0.2.1 |
| wpm | 1.12.0 | wppi | 1.10.0 |
| Wrench | 1.20.0 | writexl | 1.5.0 |
| WriteXLS | 6.5.0 | wrswoR | 1.1.1 |
| xcms | 4.0.2 | xcore | 1.6.0 |
| XDE | 2.48.0 | Xeva | 1.18.0 |
| xfun | 0.42 | xgboost | 1.7.7.1 |
| XINA | 1.20.0 | xmapbridge | 1.60.0 |
| XML | 3.99-0.16.1 | xml2 | 1.3.6 |
| XML2R | 0.0.6 | xmlparsedata | 1.0.5 |
| XNAString | 1.10.0 | xopen | 1.0.0 |
| xtable | 1.8-4 | XtraSNPlocs.Hsapiens.dbSNP144.GRCh37 | 0.99.12 |
| xts | 0.13.2 | XVector | 0.42.0 |
| yaImpute | 1.0-34 | yaml | 2.3.8 |
| yamss | 1.28.0 | YAPSA | 1.28.0 |
| yardstick | 1.3.0 | yarn | 1.28.0 |
| yeastCC | 1.42.0 | yeastExpData | 0.48.0 |
| yesno | 0.1.2 | yulab.utils | 0.1.4 |
| zCompositions | 1.5.0-3 | zeallot | 0.1.0 |
| zellkonverter | 1.12.1 | zenith | 1.4.2 |
| zFPKM | 1.24.0 | zinbwave | 1.24.0 |
| zip | 2.3.1 | zlibbioc | 1.48.2 |
| zoo | 1.8-12 | ZygosityPredictor | 1.2.0 |