RStudio Server

R: 4.3.0

rstudio-server: 2023.03.0

CUDA Version: 11.7

GPU Driver Version: 515.43.04

Release Notes

Updated R to 4.3.0, rstudio-server to 2023.03.0, and R packages to newer versions.

R packages

package	version	package	version
abc	2.2.1	abc.data	1.0
abind	1.4-5	acepack	1.4.1
actuar	3.3-2	ada	2.0-5
ade4	1.7-22	ade4TkGUI	0.3-1
adegraphics	1.0-18	adehabitatLT	0.3.27
adehabitatMA	0.3.16	admisc	0.31
affy	1.78.0	affyio	1.70.0
agricolae	1.3-5	akima	0.6-3.4
AlgDesign	1.2.1	alphavantager	0.1.3
Amelia	1.8.1	AnnotationDbi	1.62.1
anytime	0.3.9	ape	5.7-1
aplot	0.1.10	arm	1.13-1
aroma.apd	0.6.1	ascii	2.4
ash	1.0-15	askpass	1.1
assertthat	0.2.1	AUC	0.3.2
av	0.8.3	backports	1.4.1
base64	2.0.1	base64enc	0.1-3
bayesplot	1.10.0	BB	2019.10-1
BDgraph	2.72	bdsmatrix	1.3-6
beadarray	2.50.0	BeadDataPackR	1.52.0
BGLR	1.1.0	BH	1.81.0-1
biganalytics	1.1.21	bigD	0.2.0
biglm	0.9-2.1	bigmemory	4.6.1
bigmemory.sri	0.1.6	bindr	0.1.1
bindrcpp	0.2.2	Biobase	2.60.0
BiocGenerics	0.46.0	BiocManager	1.30.20
BiocParallel	1.34.1	BiocVersion	3.17.1
biomformat	1.28.0	Biostrings	2.68.0
bit	4.0.5	bit64	4.0.5
bitops	1.0-7	blob	1.2.4
BLR	1.6	bold	1.3.0
bootstrap	2019.6	bpca	1.3-4
BradleyTerry2	1.1-2	brew	1.0-8
brglm	0.7.2	brglm2	0.9
bridgesampling	1.1-2	brio	1.1.3
brms	2.19.0	Brobdingnag	1.2-9
broom	1.0.4	bslib	0.4.2
BsMD	2020.4.30	ca	0.71.1
cachem	1.0.8	calibrator	1.2-8
callr	3.7.3	car	3.1-2
carData	3.0-5	caret	6.0-94
caTools	1.18.2	CellNOptR	1.46.0
cellranger	1.1.0	checkmate	2.2.0
chk	0.8.1	chron	2.3-61
CircStats	0.2-6	classInt	0.4-9
cli	3.6.1	clipr	0.8.0
clock	0.6.1	clusterGeneration	1.3.7
CNORode	1.42.0	coda	0.19-4
coin	1.4-2	collapse	1.9.5
colorspace	2.1-0	colourpicker	1.2.0
combinat	0.0-8	commonmark	1.9.0
conditionz	0.1.0	conf.design	2.0.0
conflicted	1.2.0	contfrac	1.1-12
coro	1.0.3	corpcor	1.6.10
corrgram	1.14	corrplot	0.92
cpp11	0.4.3	crayon	1.5.2
credentials	1.3.2	crosstalk	1.2.0
crul	1.3	ctv	0.9-4
cubature	2.0.4.6	curl	5.0.0
CVST	0.2-3	d3Network	0.5.2.1
DAAG	1.25.4	data.table	1.14.8
DataExplorer	0.8.2	datapasta	3.1.0
DBI	1.1.3	dbplyr	2.3.2
deldir	1.0-6	dendextend	1.17.1
DEoptimR	1.0-13	Deriv	4.1.3
desc	1.4.2	deSolve	1.35
devtools	2.4.5	dfidx	0.0-5
dfoptim	2020.10-1	diagram	1.6.5
DiagrammeR	1.0.9	dials	1.2.0
DiceDesign	1.9	dichromat	2.0-0.1
diffobj	0.3.5	digest	0.6.31
dimRed	0.2.6	diptest	0.76-0
discretization	1.0-1.1	distributional	0.3.2
doBy	4.6.16	doc2vec	0.2.0
DoE.base	1.2-2	doMC	1.3.8
doParallel	1.0.17	dotCall64	1.0-2
downlit	0.4.2	downloader	0.4
dplyr	1.1.2	dqrng	0.3.0
DRR	0.0.4	DT	0.27
dtplyr	1.3.1	dygraphs	1.1.1.6
dynamicTreeCut	1.63-1	e1071	1.7-13
EbayesThresh	1.4-12	EBImage	4.42.0
effects	4.2-2	ellipse	0.4.5
ellipsis	0.3.2	elliptic	1.4-0
emulator	1.2-21	enrichwith	0.3.1
equivalence	0.7.2	estimability	1.4.1
ETLUtils	1.5	evaluate	0.21
expint	0.1-8	expm	0.999-7
extraDistr	1.9.1	extrafont	0.19
extrafontdb	1.0	fansi	1.0.4
farver	2.1.1	fastICA	1.2-3
fastmap	1.1.1	fastmatch	1.1-3
fda	6.0.5	fdrtool	1.2.17
fds	1.8	fdth	1.2-6
ff	4.0.9	fftwtools	0.9-11
fields	14.1	filehash	2.4-5
filelock	1.0.2	flashClust	1.01-2
flexmix	2.3-19	FNN	1.1.3.2
fontawesome	0.5.1	forcats	1.0.0
foreach	1.5.2	forecast	8.21
formatR	1.14	Formula	1.2-5
fpc	2.2-10	fracdiff	1.5-2
fs	1.6.2	functional	0.6
furrr	0.3.1	futile.logger	1.4.3
futile.options	1.0.1	future	1.32.0
future.apply	1.10.0	gam	1.22-2
gamlss	5.4-12	gamlss.data	6.0-2
gamlss.dist	6.0-5	gargle	1.4.0
gclus	1.3.2	gdata	2.19.0
geepack	1.3.9	genalg	0.2.1
generics	0.1.3	genetics	1.3.8.1.3
GenomeInfoDb	1.36.0	GenomeInfoDbData	1.2.10
GenomicRanges	1.52.0	GEOquery	2.68.0
geosphere	1.5-18	gert	1.9.2
ggalt	0.4.0	ggdendro	0.1.23
ggforce	0.4.1	ggformula	0.10.4
ggfun	0.0.9	ggmap	3.0.2
ggplot2	3.4.2	ggplotify	0.1.0
ggrepel	0.9.3	ggridges	0.5.4
ggstance	0.3.6	ggtree	3.8.0
ggvis	0.4.8	gh	1.4.0
git2r	0.32.0	gitcreds	0.1.2
glassoFast	1.0	gld	2.6.6
glmnet	4.1-7	globals	0.16.2
glue	1.6.2	gmm	1.7
gmodels	2.18.1.1	gmp	0.7-1
GO.db	3.17.0	goftest	1.2-3
googledrive	2.1.0	googlesheets4	1.1.0
googleVis	0.7.1	gower	1.0.1
GPArotation	2023.3-1	GPfit	1.0-8
gplots	3.1.3	gradethis	0.2.12.9004
graph	1.78.0	gridBase	0.4-7
gridExtra	2.3	gridGraphics	0.5-1
gridSVG	1.7-5	grImport	0.9-7
grImport2	0.2-0	gsubfn	0.7
gt	0.9.0	gtable	0.3.3
gtools	3.9.4	HaploSim	1.8.4.2
hardhat	1.3.0	haven	2.5.2
hdrcde	3.4	hexbin	1.28.3
hflights	0.1	HH	3.1-49
highlight	0.5.1	highr	0.10
Hmisc	5.1-0	hms	1.1.3
htmlTable	2.4.1	htmltools	0.5.5
htmlwidgets	1.6.2	httpcode	0.3.0
httpuv	1.6.10	httr	1.4.6
httr2	0.2.3	HydroMe	2.0-1
HyperbolicDist	0.6-4	hypergeo	1.2-13
ICC	2.4.0	Icens	1.72.0
ids	1.0.1	igraph	1.4.2
igraphdata	1.0.1	illuminaio	0.42.0
impute	1.74.1	ineq	0.2-13
infer	1.0.4	influenceR	0.1.0.2
ini	0.3.1	inline	0.3.19
insight	0.19.1	interp	1.1-4
intervals	0.15.3	inum	1.0-5
ipred	0.9-14	IRanges	2.34.0
irlba	2.3.5.1	Iso	0.0-18.1
isoband	0.2.7	iterators	1.0.14
itertools	0.1-3	janitor	2.2.0
jpeg	0.1-10	jquerylib	0.1.4
jsonlite	1.8.4	juicyjuice	0.1.0
KEGGREST	1.40.0	kernelFactory	0.3.0
kernlab	0.9-32	klaR	1.7-2
knitr	1.42	ks	1.14.0
labeling	0.4.2	labelled	2.11.0
LaF	0.8.4	Lahman	11.0-0
lambda.r	1.2.4	lars	1.3
later	1.3.1	latticeExtra	0.6-30
lava	1.7.2.1	lavaan	0.6-15
lavaan.survey	1.1.3.1	lazyeval	0.2.2
lcda	0.3.1	leaflet	2.1.2
leaflet.providers	1.9.0	leaps	3.1
LearnBayes	2.15.1	learnr	0.11.3.9000
lgr	0.4.4	lhs	1.1.6
libcoin	1.0-9	lifecycle	1.0.3
LIM	1.4.7	limma	3.56.1
limSolve	1.5.6	lisrelToR	0.1.5
listenv	0.9.0	lme4	1.1-33
lmom	2.9	lmtest	0.9-40
locfit	1.5-9.7	lokern	1.1-10
loo	2.6.0	lpSolve	5.6.18
lubridate	1.9.2	luz	0.4.0
magic	1.6-1	magrittr	2.0.3
manipulateWidget	0.11.1	mapproj	1.2.11
maps	3.4.1	maptools	1.1-6
markdown	1.6	MassSpecWavelet	1.66.0
Matching	4.10-8	MatchIt	4.5.3
mathjaxr	1.6-0	matrixcalc	1.0-6
MatrixModels	0.5-1	matrixStats	0.63.0
maxLik	1.5-2	mboost	2.9-7
mclust	6.0.0	mcmc	0.9-7
MCMCglmm	2.34	MEIGOR	1.33.0
memoise	2.0.1	MEMSS	0.9-3
Metrics	0.1.4	mi	1.1
mice	3.15.0	microbenchmark	1.4.10
mime	0.12	miniUI	0.1.1.1
minpack.lm	1.2-3	minqa	1.2.5
misc3d	0.9-1	miscTools	0.6-28
mitools	2.4	mixOmics	6.24.0
mlbench	2.1-3.1	mlmRev	1.0-8
mlogit	1.1-1	mlr3	0.16.0
mlr3measures	0.5.0	mlr3misc	0.11.0
mnormt	2.1.1	modeldata	1.1.0
modelenv	0.1.1	ModelMetrics	1.2.2.2
modelr	0.1.11	modeltime	1.2.6
modeltools	0.2-23	moments	0.14.1
mondate	0.10.02	mosaic	1.8.4.2
mosaicCore	0.9.2.1	mosaicData	0.20.3
mratios	1.4.2	multcomp	1.4-23
multicool	0.1-12	multtest	2.56.0
munsell	0.5.0	mvMORPH	1.1.7
mvtnorm	1.1-3	natserv	1.0.0
network	1.18.1	networkD3	0.4
NISTnls	0.9-13	nleqslv	3.3.4
nloptr	2.0.3	nls2	0.3-3
nlstools	2.0-0	nnls	1.4
nortest	1.0-4	np	0.60-17
numbers	0.8-5	numDeriv	2016.8-1.1
odbc	1.3.4	openssl	2.0.6
openxlsx	4.2.5.2	optextras	2019-12.4
optimParallel	1.0-2	ordinal	2022.11-16
padr	0.6.2	PairedData	1.1.1
palmerpenguins	0.1.1	paradox	0.11.1
parallelly	1.35.0	parsnip	1.1.0
partitions	1.10-7	party	1.3-13
partykit	1.2-20	pastecs	1.3.21
patchwork	1.1.2	pbapply	1.7-0
pbivnorm	0.6.0	pbkrtest	0.5.2
pbmcapply	1.5.1	PBSmapping	2.73.2
pcaMethods	1.92.0	pcaPP	2.0-3
pedigree	1.4.2	PerformanceAnalytics	2.0.4
permute	0.9-7	phangorn	2.11.1
phyloseq	1.44.0	phytools	1.5-1
pillar	1.9.0	pins	1.1.0
pixmap	0.4-12	pkgbuild	1.4.0
pkgconfig	2.0.3	pkgdown	2.0.7
pkgload	1.3.2	plm	2.6-3
plogr	0.2.0	plot3D	1.4
plotly	4.10.1	plotrix	3.8-2
pls	2.8-1	plyr	1.8.8
png	0.1-8	poLCA	1.6.0.1
polspline	1.1.22	polyclip	1.10-4
polycor	0.8-1	polynom	1.4-1
posterior	1.4.1	prabclus	2.3-2
pracma	2.4.2	praise	1.0.0
preprocessCore	1.62.1	prettyunits	1.1.1
princurve	2.1.6	pROC	1.18.0
processx	3.8.1	prodlim	2023.03.31
profileModel	0.6.1	profvis	0.3.8
progress	1.2.2	progressr	0.13.0
proj4	1.0-12	promises	1.2.0.1
prophet	1.0	proto	1.0.0
proxy	0.4-27	PRROC	1.3.1
ps	1.7.5	pscl	1.5.5
psy	1.2	psych	2.3.3
purrr	1.0.1	qap	0.1-2
qtl	1.60	quadprog	1.5-8
Quandl	2.11.0	quantmod	0.4.22
quantreg	5.95	questionr	0.7.8
qvalue	2.32.0	qvcalc	1.0.2
R.cache	0.16.0	R.devices	2.17.1
R.filesets	2.15.0	R.huge	0.9.0
R.matlab	3.7.0	R.methodsS3	1.8.2
R.oo	1.25.0	R.rsp	0.45.0
R.utils	2.12.2	R2HTML	2.3.3
R2OpenBUGS	3.2-3.2.1	R2WinBUGS	2.1-21
R6	2.5.1	ragg	1.2.5
rainbow	3.7	randomForest	4.7-1.1
rappdirs	0.3.3	rARPACK	0.11-0
raster	3.6-20	ratelimitr	0.4.1
rbenchmark	1.0.0	RBGL	1.76.0
rbibutils	2.2.13	Rcgmin	2022-4.30
rcmdcheck	1.4.0	RColorBrewer	1.1-3
Rcpp	1.0.10	RcppAnnoy	0.0.20
RcppArmadillo	0.12.2.0.0	RcppEigen	0.3.3.9.3
RcppParallel	5.1.7	RcppProgress	0.4.2
RcppRoll	0.3.0	Rcsdp	0.1.57.5
RCurl	1.98-1.12	Rdpack	2.4
reactable	0.4.4	reactR	0.4.4
readr	2.1.4	readstata13	0.10.1
readxl	1.4.2	recipes	1.0.6
registry	0.5-1	regress	1.3-21
relimp	1.0-5	rematch	1.0.1
rematch2	2.1.2	remotes	2.4.2
rentrez	1.2.3	renv	0.17.3
reprex	2.0.2	reshape	0.8.9
reshape2	1.4.4	rex	1.2.1
rgl	1.1.3	RgoogleMaps	1.4.5.3
RGraphics	3.0-2	Rgraphviz	2.44.0
rhdf5	2.44.0	rhdf5filters	1.12.1
Rhdf5lib	1.22.0	riingo	0.3.1
ritis	1.0.0	rJava	1.0-6
RJDBC	0.2-10	rjson	0.2.21
RJSONIO	1.3-1.8	rlang	1.1.1
rlecuyer	0.3-7	rmarkdown	2.21
rmeta	3.0	Rmpfr	0.9-2
rms	6.7-0	RMySQL	0.10.25
rncl	0.8.7	robustbase	0.95-1
ROCR	1.0-11	Rook	1.2
rotl	3.0.14	roxygen2	7.2.3
RPostgreSQL	0.7-5	rprojroot	2.0.3
rredlist	0.7.1	rsample	1.1.1
Rsolnp	1.16	RSpectra	0.16-1
RSQLite	2.3.1	rstan	2.21.8
rstantools	2.3.1	rstudioapi	0.14
Rttf2pt1	1.3.12	RUnit	0.4.32
rversions	2.1.2	rvest	1.0.3
Rvmmin	2018-4.17.1	s2	1.1.3
S4Vectors	0.38.1	sandwich	3.0-2
sass	0.4.6	scales	1.2.1
scatterplot3d	0.3-44	ScottKnott	1.3-0
sealasso	0.1-3	segmented	1.6-4
selectr	0.4-2	sem	3.1-15
SemiPar	1.0-4.2	semTools	0.5-6
seqinr	4.2-30	seriation	1.4.2
sessioninfo	1.2.2	setRNG	2022.4-1
sets	1.0-24	sf	1.0-12
sfsmisc	1.1-15	shape	1.4.6
shapefiles	0.7.2	shiny	1.7.4
shiny.semantic	0.4.3	shinyjs	2.1.0
shinystan	2.6.0	shinythemes	1.2.0
SimComp	3.3	simsem	0.5-16
sitmo	2.0.2	slam	0.1-50
slider	0.3.0	sn	2.1.1
sna	2.7-1	snakecase	0.11.0
snow	0.4-4	snowfall	1.84-6.2
solrium	1.2.0	sourcetools	0.1.7-1
sp	1.6-0	spam	2.9-1
SparseM	1.81	SpatialExtremes	2.1-0
spatstat	3.0-5	spatstat.data	3.0-1
spatstat.explore	3.1-0	spatstat.geom	3.1-0
spatstat.linnet	3.1-0	spatstat.model	3.2-3
spatstat.random	3.1-4	spatstat.sparse	3.0-1
spatstat.utils	3.0-2	spData	2.2.2
spdep	1.2-8	SQUAREM	2021.1
ssgraph	1.15	stabs	0.6-4
StanHeaders	2.21.0-7	statmod	1.5.0
statnet.common	4.8.0	stringi	1.7.12
stringr	1.5.0	strucchange	1.5-3
styler	1.9.1	subplex	1.8
superml	0.5.6	SuppDists	1.1-9.7
survcomp	1.50.0	survey	4.2-1
survivalROC	1.0.3.1	survPresmooth	1.1-11
svUnit	1.0.6	sys	3.4.1
systemfonts	1.0.4	tables	0.9.17
tabnet	0.3.0	taxize	0.9.100
tensor	1.5	tensorA	0.36.2
terra	1.7-29	testit	0.13
testthat	3.1.8	textplot	0.2.2
textshaping	0.3.6	TH.data	1.1-2
threejs	0.3.3	tibble	3.2.1
tidymodels	1.1.0	tidyquant	1.0.7
tidyr	1.3.0	tidyselect	1.2.0
tidytree	0.4.2	tidyverse	2.0.0
tiff	0.1-11	timechange	0.2.0
timeDate	4022.108	timeSeries	4021.105
timetk	2.8.3	tinytex	0.45
tis	1.39	tkrplot	0.0-27
tmvtnorm	1.5	topicmodels.etm	0.1.0
torch	0.10.0	torchaudio	0.3.1.9000
torchdatasets	0.3.0	torchvision	0.5.1
treeio	1.24.0	triebeard	0.4.1
trimcluster	0.1-5	tripack	1.3-9.1
truncnorm	1.0-9	truncreg	0.2-5
tseries	0.10-54	tsfeatures	1.1
TSP	1.2-4	TTR	0.24.3
tune	1.1.1	tweenr	2.0.2
tzdb	0.3.0	ucminf	1.1-4.1
udpipe	0.8.11	units	0.8-2
urca	1.3-3	urlchecker	1.0.1
urltools	1.7.3	usethis	2.1.6
utf8	1.2.3	uuid	1.1-0
uwot	0.1.14	V8	4.3.0
vcd	1.4-11	vctrs	0.6.2
vegan	2.6-4	VGAM	1.1-8
VGAMdata	1.1-8	viridis	0.6.3
viridisLite	0.4.2	visNetwork	2.1.2
vroom	1.6.3	waldo	0.5.1
warp	0.2.0	waveslim	1.8.4
wavethresh	4.7.2	webshot	0.5.4
whisker	0.4.1	WikidataQueryServiceR	1.0.0
WikidataR	2.3.3	WikipediR	1.5.0
wikitaxa	0.4.0	withr	2.5.0
wk	0.7.3	word2vec	0.3.4
workflows	1.1.3	workflowsets	1.0.1
worrms	0.4.2	xfun	0.39
xgboost	1.7.5.1	XLConnect	1.0.7
xlsx	0.6.5	xlsxjars	0.6.1
XML	3.99-0.14	xml2	1.3.4
xopen	1.0.0	xtable	1.8-4
xts	0.13.1	XVector	0.40.0
yaml	2.3.7	yardstick	1.2.0
yulab.utils	0.0.6	zeallot	0.1.0
zip	2.3.0	zlibbioc	1.46.0
zoo	1.8-12